View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14234_high_57 (Length: 248)
Name: NF14234_high_57
Description: NF14234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14234_high_57 |
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Alignment Details
Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 4740446 - 4740503
Alignment:
| Q |
14 |
cataggtaatcaattagtcaaaattacacttagctcaatcgaaaaagggcaaccttcc |
71 |
Q |
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| T |
4740446 |
cataggtaatcaattagtcaaaattacacttagctcaatcgaaaaagggtaaccttcc |
4740503 |
T |
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Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 4745708 - 4745765
Alignment:
| Q |
14 |
cataggtaatcaattagtcaaaattacacttagctcaatcgaaaaagggcaaccttcc |
71 |
Q |
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|||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||| |
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| T |
4745708 |
cataggtaatgaattagtcaaaattacatctagctcaatcgaaaaaggacaaccttcc |
4745765 |
T |
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