View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14234_low_15 (Length: 446)
Name: NF14234_low_15
Description: NF14234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14234_low_15 |
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Alignment Details
Target: chr6 (Bit Score: 402; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 17 - 438
Target Start/End: Complemental strand, 34359412 - 34358991
Alignment:
| Q |
17 |
attgtaaccatttttctcatattggaaattgctcaagaacacgttatttccactgacagaaaccaacaaattttgctgactgtttgatatcacattgttg |
116 |
Q |
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| T |
34359412 |
attgtaaccatttttctcatattggaaattgctcaagaacacgttatttccactgacagaaaccaacaaattttgctgactgtttgatatcacattgttg |
34359313 |
T |
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| Q |
117 |
aatatatggaccccctcaaaagtattatgaaacaaactatataccataaataacatgtcataagtgcaattcctcaatcatgtaaaaaggacacaaaact |
216 |
Q |
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| T |
34359312 |
aatatatggaccccctcaaaagtattatgaaacaaactatataccataaataacatgtcataagtgcaattcctcaatcatgtaaaaaggacacaaaact |
34359213 |
T |
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| Q |
217 |
tttgactaacatgtatacacatatagtcctaaattttaccactatcattatctttgaaaaataatttagaatctcacataattccacacgcaaaccaact |
316 |
Q |
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| T |
34359212 |
tttgactaacatgtatacacatatagtcctaaattttaccactgtcattttctttgaaaaataatttagaatctcacataattccacacgcaaaccaact |
34359113 |
T |
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| Q |
317 |
acataaaacacaaatacaaacactagtaagaagtatttgattactaatactatatatagcttgatcaatattcaatatccatgatcaccatcatcccttt |
416 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34359112 |
acataaaacacaaatacaaacactaataagaagtatttgattactaatactataaatagcttgatcaatattcaatatccatgatcaccatcatcccttt |
34359013 |
T |
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| Q |
417 |
aattactttttgctatattctt |
438 |
Q |
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| T |
34359012 |
aattactttttgctatactctt |
34358991 |
T |
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