View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14234_low_31 (Length: 325)
Name: NF14234_low_31
Description: NF14234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14234_low_31 |
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Alignment Details
Target: chr8 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 3 - 315
Target Start/End: Original strand, 42368404 - 42368716
Alignment:
| Q |
3 |
actttcgtatgagaataatattacatgatggcatccatgtgtgctaccaaatgatgaagctgcgtaacttaattttggatgctccaacaaactaccgtgt |
102 |
Q |
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| T |
42368404 |
actttcgtatgagaataatattacatgatggtatccatgtgtgctaccaaatgatgaagctgcataacttaattttggatgctccaacaaactaccgtgt |
42368503 |
T |
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| Q |
103 |
ttcaaacacgaacgggtaagccatagttttggtacactcttatgaatccatcagatcctgctgttacaattacttggccccacaagtgagaattagacat |
202 |
Q |
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| T |
42368504 |
ttcaaacacgaacgggtaagccataattttggtacactcttatgaatccatcagatcctgctgttacaattacttggccccacaagtgagaattagacat |
42368603 |
T |
|
| Q |
203 |
tcccttgcaagcacttctcaagaacctatactctgatttacatattgtaggagaaacaacagtatgacccgagtcaagaagcgtctcctcaggccatgtt |
302 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
42368604 |
tcccttgcaagcacttctcaagaacctatactctgatttacatattgtaggagaaacaacagtttgacccgagtcaagaagcgtctcctcaggccatgtt |
42368703 |
T |
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| Q |
303 |
gcagaaacctttg |
315 |
Q |
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||||||||||||| |
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| T |
42368704 |
gcagaaacctttg |
42368716 |
T |
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