View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14234_low_44 (Length: 290)
Name: NF14234_low_44
Description: NF14234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14234_low_44 |
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Alignment Details
Target: chr7 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 17 - 277
Target Start/End: Complemental strand, 13787895 - 13787635
Alignment:
| Q |
17 |
acaaaacactaacttataaccactctcaaatctctcaatcttaaaccaattatcatcggtttcacgaccaggattcccttgaacaccaccagtagtaaca |
116 |
Q |
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| T |
13787895 |
acaaaacactaacttataaccactctcaaatctctcaatcttaaaccaattatcaacggtttcacgaccaggattcccttgaacaccaccagtagtaaca |
13787796 |
T |
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| Q |
117 |
aacctttgacttgttgcaacatcaactttctcaaccttccacacagtcacagaagaagttgaacagtttgttgggaaactatgaatcacgttgagatcag |
216 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13787795 |
aacctttgacttgttgcaacatcaactttgtcaaccttccacacagtcacagaagaagttgaacagtttgttgggaaactatgaatcacgttgagatcag |
13787696 |
T |
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| Q |
217 |
ttgaaaatctaataacaccttttttgaagttaaaagggacaaagctaaactgcattgcttc |
277 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13787695 |
ttgaaactctaataacaccttttttgaagttaaaagggacaaagctaaactgcattgcttc |
13787635 |
T |
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