View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14234_low_53 (Length: 265)

Name: NF14234_low_53
Description: NF14234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14234_low_53
NF14234_low_53
[»] chr8 (63 HSPs)
chr8 (88-254)||(36325231-36325397)
chr8 (94-254)||(11674698-11674857)
chr8 (129-254)||(38845533-38845658)
chr8 (129-254)||(44407091-44407216)
chr8 (98-254)||(3041690-3041846)
chr8 (129-254)||(40775884-40776009)
chr8 (88-254)||(2266489-2266655)
chr8 (117-254)||(23698509-23698646)
chr8 (117-254)||(1425287-1425423)
chr8 (116-251)||(23663782-23663917)
chr8 (88-228)||(36325494-36325634)
chr8 (116-239)||(8316868-8316991)
chr8 (116-251)||(12273121-12273256)
chr8 (94-228)||(11674954-11675088)
chr8 (116-228)||(16388817-16388929)
chr8 (126-254)||(22915623-22915751)
chr8 (173-254)||(12199184-12199265)
chr8 (173-254)||(12443612-12443693)
chr8 (129-226)||(35449871-35449968)
chr8 (116-225)||(39071701-39071810)
chr8 (182-254)||(38955794-38955866)
chr8 (94-203)||(23505055-23505164)
chr8 (94-203)||(23507741-23507850)
chr8 (116-228)||(13186085-13186197)
chr8 (117-220)||(4405959-4406062)
chr8 (124-228)||(36928509-36928613)
chr8 (127-227)||(38862654-38862754)
chr8 (88-203)||(40775647-40775762)
chr8 (116-226)||(40318257-40318367)
chr8 (94-203)||(234054-234163)
chr8 (94-203)||(710465-710574)
chr8 (94-203)||(747677-747786)
chr8 (94-203)||(871572-871681)
chr8 (183-228)||(31608804-31608849)
chr8 (89-202)||(42945429-42945542)
chr8 (90-202)||(10445650-10445762)
chr8 (182-226)||(35756673-35756717)
chr8 (116-219)||(4994957-4995059)
chr8 (89-203)||(25124561-25124675)
chr8 (182-227)||(36186359-36186404)
chr8 (90-203)||(44406856-44406969)
chr8 (94-202)||(44664511-44664619)
chr8 (87-198)||(2266782-2266893)
chr8 (116-227)||(2535842-2535953)
chr8 (112-203)||(37542539-37542630)
chr8 (88-203)||(38845296-38845411)
chr8 (116-244)||(8316678-8316803)
chr8 (94-203)||(7983431-7983540)
chr8 (94-203)||(15229934-15230043)
chr8 (116-205)||(20386744-20386833)
chr8 (88-228)||(15230220-15230360)
chr8 (89-201)||(37542222-37542334)
chr8 (88-203)||(3041453-3041568)
chr8 (116-203)||(12272943-12273030)
chr8 (124-203)||(23698342-23698421)
chr8 (116-202)||(13186376-13186462)
chr8 (116-244)||(38862841-38862966)
chr8 (92-202)||(41353575-41353685)
chr8 (182-227)||(2534786-2534831)
chr8 (116-205)||(20385593-20385682)
chr8 (94-199)||(25124881-25124986)
chr8 (94-203)||(35634413-35634522)
chr8 (129-202)||(39474584-39474657)
[»] chr5 (57 HSPs)
chr5 (87-254)||(6758099-6758266)
chr5 (88-254)||(41930513-41930679)
chr5 (129-254)||(297248-297373)
chr5 (129-254)||(1506005-1506130)
chr5 (129-254)||(31482636-31482761)
chr5 (116-254)||(3529107-3529245)
chr5 (116-253)||(11761774-11761911)
chr5 (116-254)||(24547390-24547528)
chr5 (116-254)||(27587173-27587311)
chr5 (116-254)||(38475267-38475402)
chr5 (116-226)||(5993914-5994024)
chr5 (117-254)||(28771103-28771240)
chr5 (89-203)||(41930801-41930915)
chr5 (116-228)||(32242267-32242379)
chr5 (124-227)||(35512181-35512284)
chr5 (116-252)||(6150479-6150612)
chr5 (116-220)||(13962889-13962993)
chr5 (116-254)||(16083002-16083137)
chr5 (116-228)||(20840558-20840670)
chr5 (116-254)||(35920452-35920587)
chr5 (116-220)||(39453325-39453429)
chr5 (116-228)||(19892599-19892711)
chr5 (117-220)||(186445-186548)
chr5 (116-227)||(5024310-5024421)
chr5 (116-219)||(16157155-16157258)
chr5 (91-228)||(6757865-6758002)
chr5 (145-220)||(14194722-14194797)
chr5 (116-226)||(17202424-17202534)
chr5 (182-254)||(18670290-18670359)
chr5 (94-203)||(17544362-17544471)
chr5 (116-220)||(18247111-18247213)
chr5 (182-227)||(38442159-38442204)
chr5 (160-220)||(8322473-8322533)
chr5 (116-220)||(13362527-13362631)
chr5 (182-226)||(28269681-28269725)
chr5 (145-220)||(29646661-29646736)
chr5 (89-203)||(1506252-1506366)
chr5 (160-226)||(11047506-11047572)
chr5 (116-226)||(20814428-20814538)
chr5 (116-205)||(24141477-24141566)
chr5 (94-203)||(33871342-33871451)
chr5 (116-228)||(3528898-3529010)
chr5 (116-203)||(186735-186822)
chr5 (182-220)||(12904845-12904883)
chr5 (129-203)||(31482440-31482514)
chr5 (182-227)||(14848999-14849044)
chr5 (81-201)||(8875439-8875559)
chr5 (116-228)||(21265168-21265280)
chr5 (116-203)||(8322720-8322807)
chr5 (116-203)||(37991224-37991311)
chr5 (129-203)||(297052-297126)
chr5 (182-220)||(14848830-14848868)
chr5 (182-227)||(15645004-15645049)
chr5 (116-228)||(6150711-6150823)
chr5 (116-228)||(11762008-11762120)
chr5 (112-207)||(21265453-21265549)
chr5 (116-228)||(28269447-28269559)
[»] chr3 (67 HSPs)
chr3 (90-253)||(10770726-10770889)
chr3 (94-254)||(36314532-36314692)
chr3 (94-254)||(48322611-48322771)
chr3 (90-254)||(54466422-54466586)
chr3 (129-254)||(8041654-8041779)
chr3 (116-254)||(2796204-2796342)
chr3 (116-253)||(51994152-51994289)
chr3 (116-254)||(19741157-19741295)
chr3 (90-203)||(10770489-10770602)
chr3 (94-228)||(36314301-36314435)
chr3 (94-228)||(48322380-48322514)
chr3 (116-228)||(33689670-33689782)
chr3 (116-252)||(40033726-40033859)
chr3 (145-254)||(55052513-55052622)
chr3 (116-254)||(46474840-46474975)
chr3 (116-220)||(9294257-9294361)
chr3 (124-227)||(23458271-23458374)
chr3 (90-228)||(33156285-33156423)
chr3 (112-207)||(42342812-42342907)
chr3 (39-90)||(50272719-50272770)
chr3 (94-203)||(11910702-11910811)
chr3 (88-228)||(37778562-37778702)
chr3 (116-220)||(53756769-53756873)
chr3 (129-220)||(43384321-43384412)
chr3 (114-228)||(9367764-9367878)
chr3 (182-220)||(26463897-26463935)
chr3 (182-220)||(40758235-40758273)
chr3 (89-199)||(47551491-47551601)
chr3 (95-228)||(29118827-29118960)
chr3 (90-203)||(52032137-52032250)
chr3 (86-199)||(52032457-52032570)
chr3 (116-204)||(1079536-1079624)
chr3 (116-220)||(21185994-21186098)
chr3 (124-220)||(40506086-40506182)
chr3 (91-203)||(54466708-54466820)
chr3 (117-203)||(36418004-36418090)
chr3 (129-203)||(47921504-47921578)
chr3 (94-203)||(3469514-3469623)
chr3 (90-203)||(8041901-8042014)
chr3 (88-201)||(10294875-10294988)
chr3 (182-227)||(41988053-41988098)
chr3 (145-202)||(43998199-43998256)
chr3 (116-228)||(4323493-4323605)
chr3 (87-203)||(32306420-32306536)
chr3 (90-202)||(41421971-41422083)
chr3 (112-228)||(46475072-46475187)
chr3 (116-203)||(19740948-19741035)
chr3 (89-228)||(40788709-40788848)
chr3 (116-203)||(41558198-41558285)
chr3 (164-198)||(8741314-8741348)
chr3 (182-220)||(20704521-20704559)
chr3 (182-220)||(20704626-20704664)
chr3 (174-228)||(25107296-25107350)
chr3 (182-228)||(29192126-29192172)
chr3 (182-228)||(30380937-30380983)
chr3 (182-228)||(32717068-32717114)
chr3 (117-203)||(36417714-36417800)
chr3 (182-228)||(39399383-39399429)
chr3 (124-244)||(42343009-42343126)
chr3 (182-220)||(44654802-44654840)
chr3 (182-228)||(54317922-54317968)
chr3 (94-203)||(10294570-10294679)
chr3 (125-202)||(47857562-47857639)
chr3 (87-203)||(3469196-3469312)
chr3 (124-228)||(23458012-23458116)
chr3 (94-202)||(32306739-32306847)
chr3 (117-205)||(32431506-32431594)
[»] chr4 (93 HSPs)
chr4 (88-254)||(27934529-27934695)
chr4 (94-254)||(9400753-9400913)
chr4 (94-254)||(4982960-4983120)
chr4 (91-254)||(33247507-33247670)
chr4 (117-254)||(22566825-22566962)
chr4 (129-252)||(42738267-42738390)
chr4 (88-254)||(9145000-9145166)
chr4 (129-254)||(32950180-32950305)
chr4 (129-254)||(34837308-34837433)
chr4 (129-254)||(38012208-38012333)
chr4 (116-254)||(24711136-24711274)
chr4 (112-254)||(43155761-43155903)
chr4 (116-254)||(44967303-44967441)
chr4 (112-254)||(18831370-18831512)
chr4 (116-254)||(23613334-23613472)
chr4 (124-254)||(36009078-36009208)
chr4 (116-254)||(49879441-49879579)
chr4 (116-252)||(50418904-50419040)
chr4 (116-254)||(13058062-13058200)
chr4 (112-254)||(16005859-16006001)
chr4 (116-254)||(37248261-37248399)
chr4 (116-255)||(5368972-5369111)
chr4 (116-254)||(7451859-7451997)
chr4 (116-226)||(37976446-37976556)
chr4 (94-203)||(9400522-9400631)
chr4 (116-228)||(34765671-34765783)
chr4 (94-203)||(4982729-4982838)
chr4 (116-226)||(35508533-35508643)
chr4 (116-228)||(24349699-24349811)
chr4 (116-228)||(53701837-53701949)
chr4 (117-220)||(54086994-54087097)
chr4 (94-228)||(16605605-16605739)
chr4 (116-194)||(33247299-33247377)
chr4 (116-252)||(51692578-51692711)
chr4 (116-220)||(54435396-54435500)
chr4 (182-228)||(14801827-14801873)
chr4 (129-203)||(42738069-42738143)
chr4 (116-226)||(52909278-52909388)
chr4 (116-225)||(15507967-15508075)
chr4 (89-202)||(27069225-27069338)
chr4 (116-228)||(41583522-41583634)
chr4 (116-203)||(49879232-49879319)
chr4 (116-203)||(50418693-50418780)
chr4 (88-203)||(54858874-54858989)
chr4 (90-204)||(6236830-6236943)
chr4 (129-203)||(9144804-9144878)
chr4 (182-228)||(35028289-35028335)
chr4 (182-228)||(52298117-52298163)
chr4 (116-217)||(10781786-10781887)
chr4 (86-203)||(22717934-22718051)
chr4 (90-202)||(11523948-11524060)
chr4 (124-220)||(17356221-17356317)
chr4 (82-198)||(45463392-45463508)
chr4 (88-228)||(54858557-54858697)
chr4 (116-228)||(55867405-55867517)
chr4 (91-198)||(6237141-6237248)
chr4 (84-167)||(22567107-22567190)
chr4 (88-203)||(34837071-34837186)
chr4 (124-227)||(53129798-53129901)
chr4 (89-203)||(27149310-27149423)
chr4 (129-203)||(32950427-32950501)
chr4 (116-202)||(35028023-35028109)
chr4 (129-203)||(38012455-38012529)
chr4 (182-228)||(48529867-48529913)
chr4 (129-203)||(51203647-51203721)
chr4 (89-202)||(3032580-3032693)
chr4 (94-203)||(10407892-10408001)
chr4 (94-203)||(10408203-10408312)
chr4 (116-205)||(11446295-11446384)
chr4 (86-203)||(22987165-22987282)
chr4 (94-203)||(27891587-27891696)
chr4 (116-205)||(32063650-32063739)
chr4 (116-220)||(24411383-24411487)
chr4 (124-228)||(30642437-30642541)
chr4 (94-202)||(45463076-45463184)
chr4 (116-228)||(46661205-46661317)
chr4 (116-228)||(50750912-50751024)
chr4 (129-228)||(27068948-27069047)
chr4 (124-203)||(39539234-39539313)
chr4 (79-202)||(39701224-39701347)
chr4 (181-228)||(40387557-40387604)
chr4 (116-203)||(51692835-51692922)
chr4 (117-227)||(11448021-11448131)
chr4 (144-202)||(22718254-22718312)
chr4 (144-202)||(22986904-22986962)
chr4 (116-202)||(24711397-24711483)
chr4 (182-220)||(48528563-48528601)
chr4 (93-202)||(39667091-39667200)
chr4 (94-203)||(50504139-50504248)
chr4 (91-199)||(5818093-5818201)
chr4 (116-220)||(8438306-8438409)
chr4 (128-220)||(8439523-8439615)
chr4 (124-228)||(41582480-41582584)
[»] chr7 (68 HSPs)
chr7 (94-254)||(32680829-32680989)
chr7 (85-254)||(30948394-30948563)
chr7 (129-254)||(34928884-34929009)
chr7 (129-254)||(39686768-39686893)
chr7 (117-254)||(19204515-19204652)
chr7 (116-254)||(17102045-17102183)
chr7 (116-254)||(27991764-27991902)
chr7 (116-254)||(6253496-6253634)
chr7 (116-254)||(6571038-6571176)
chr7 (116-254)||(32298970-32299108)
chr7 (94-228)||(32680598-32680732)
chr7 (116-252)||(22871544-22871680)
chr7 (116-220)||(28469307-28469411)
chr7 (116-220)||(32053442-32053546)
chr7 (116-226)||(10935819-10935929)
chr7 (116-228)||(27396886-27396998)
chr7 (116-226)||(42731444-42731554)
chr7 (112-220)||(2640477-2640585)
chr7 (116-228)||(45010895-45011007)
chr7 (142-220)||(48789102-48789180)
chr7 (90-203)||(42618225-42618338)
chr7 (182-228)||(40379860-40379906)
chr7 (116-220)||(23181293-23181397)
chr7 (89-203)||(46205623-46205737)
chr7 (100-205)||(18086298-18086403)
chr7 (182-227)||(24388910-24388955)
chr7 (89-202)||(28890577-28890690)
chr7 (112-228)||(2640199-2640315)
chr7 (116-228)||(5457198-5457310)
chr7 (100-228)||(18087629-18087757)
chr7 (93-201)||(32068098-32068206)
chr7 (94-202)||(32068411-32068519)
chr7 (182-226)||(45010689-45010733)
chr7 (116-218)||(18855955-18856057)
chr7 (129-203)||(30948198-30948272)
chr7 (81-203)||(32934338-32934460)
chr7 (129-203)||(34928688-34928762)
chr7 (129-203)||(39686572-39686646)
chr7 (116-226)||(42019890-42020000)
chr7 (182-227)||(3914229-3914274)
chr7 (182-227)||(13311325-13311370)
chr7 (94-203)||(23058432-23058541)
chr7 (89-202)||(23058744-23058857)
chr7 (94-203)||(43266580-43266689)
chr7 (90-203)||(46204420-46204533)
chr7 (116-228)||(12229363-12229475)
chr7 (116-228)||(17886781-17886893)
chr7 (188-220)||(37656949-37656981)
chr7 (182-218)||(38643641-38643677)
chr7 (152-203)||(6571264-6571315)
chr7 (93-228)||(25628480-25628615)
chr7 (117-228)||(42731710-42731821)
chr7 (182-228)||(7354953-7354999)
chr7 (182-228)||(12644096-12644142)
chr7 (182-220)||(38644631-38644669)
chr7 (182-228)||(43124443-43124489)
chr7 (182-228)||(45914615-45914661)
chr7 (94-203)||(22081563-22081671)
chr7 (129-202)||(22081874-22081947)
chr7 (94-203)||(25453131-25453240)
chr7 (94-203)||(42617914-42618023)
chr7 (94-199)||(43266269-43266374)
chr7 (110-199)||(48788822-48788911)
chr7 (116-228)||(17885653-17885765)
chr7 (116-228)||(27991999-27992111)
chr7 (117-201)||(32687423-32687507)
chr7 (126-202)||(47945392-47945468)
chr7 (126-202)||(47950822-47950898)
[»] chr6 (43 HSPs)
chr6 (94-254)||(14196849-14197009)
chr6 (144-254)||(28000619-28000729)
chr6 (89-252)||(25486164-25486325)
chr6 (129-255)||(363063-363189)
chr6 (116-254)||(30337474-30337612)
chr6 (112-254)||(17734428-17734570)
chr6 (89-203)||(14196613-14196727)
chr6 (90-203)||(25485952-25486065)
chr6 (117-220)||(33517560-33517663)
chr6 (116-226)||(12080661-12080771)
chr6 (125-226)||(30803895-30803996)
chr6 (116-228)||(21628004-21628116)
chr6 (116-228)||(26463204-26463316)
chr6 (110-226)||(30725779-30725894)
chr6 (112-228)||(33646984-33647100)
chr6 (85-202)||(32593484-32593601)
chr6 (91-203)||(21836032-21836143)
chr6 (116-228)||(30804152-30804264)
chr6 (88-203)||(362867-362982)
chr6 (116-203)||(17734221-17734308)
chr6 (129-203)||(22367463-22367537)
chr6 (145-226)||(3059311-3059392)
chr6 (116-205)||(13379796-13379885)
chr6 (94-202)||(7905246-7905354)
chr6 (90-202)||(15913547-15913659)
chr6 (182-228)||(1215157-1215203)
chr6 (88-202)||(7905558-7905672)
chr6 (116-218)||(8089468-8089570)
chr6 (93-203)||(31407192-31407302)
chr6 (90-203)||(7160803-7160916)
chr6 (129-198)||(22372978-22373047)
chr6 (90-203)||(22502773-22502886)
chr6 (116-228)||(33517825-33517937)
chr6 (173-228)||(11435960-11436015)
chr6 (116-203)||(15115364-15115451)
chr6 (117-220)||(24210557-24210660)
chr6 (116-203)||(30337734-30337821)
chr6 (124-205)||(20651961-20652042)
chr6 (94-203)||(21836344-21836453)
chr6 (90-203)||(28000384-28000497)
chr6 (94-203)||(31406881-31406990)
chr6 (182-226)||(11392929-11392973)
chr6 (116-228)||(30726050-30726162)
[»] chr1 (78 HSPs)
chr1 (91-254)||(24905401-24905563)
chr1 (118-254)||(28011390-28011526)
chr1 (129-254)||(33442828-33442953)
chr1 (91-254)||(31514552-31514714)
chr1 (116-254)||(25647909-25648047)
chr1 (129-254)||(52134106-52134231)
chr1 (142-254)||(4716702-4716814)
chr1 (110-254)||(26024442-26024586)
chr1 (124-253)||(183457-183586)
chr1 (117-254)||(47999357-47999494)
chr1 (88-203)||(28011653-28011768)
chr1 (116-228)||(6367587-6367699)
chr1 (94-228)||(24905170-24905304)
chr1 (124-228)||(17662141-17662245)
chr1 (116-254)||(23209595-23209730)
chr1 (116-220)||(14878996-14879100)
chr1 (116-254)||(19515844-19515979)
chr1 (116-228)||(40210661-40210773)
chr1 (116-220)||(1103484-1103590)
chr1 (89-203)||(31514316-31514430)
chr1 (116-228)||(13914358-13914470)
chr1 (124-254)||(40772540-40772667)
chr1 (116-226)||(34464742-34464852)
chr1 (182-244)||(10304014-10304073)
chr1 (182-252)||(10304125-10304192)
chr1 (159-227)||(24009833-24009901)
chr1 (116-228)||(34850356-34850468)
chr1 (116-220)||(35152368-35152472)
chr1 (124-228)||(37578483-37578587)
chr1 (160-228)||(42248542-42248610)
chr1 (116-226)||(30711352-30711462)
chr1 (110-220)||(41098752-41098862)
chr1 (116-225)||(19017923-19018032)
chr1 (117-218)||(46163056-46163157)
chr1 (116-228)||(4960565-4960677)
chr1 (182-226)||(16970828-16970872)
chr1 (116-228)||(34849036-34849148)
chr1 (128-254)||(36694516-36694639)
chr1 (128-254)||(36710617-36710740)
chr1 (94-202)||(40714447-40714555)
chr1 (116-228)||(48691173-48691285)
chr1 (129-203)||(52134353-52134427)
chr1 (94-203)||(20760819-20760928)
chr1 (94-203)||(32558421-32558530)
chr1 (182-227)||(32917351-32917396)
chr1 (145-226)||(43758876-43758957)
chr1 (182-226)||(1841550-1841594)
chr1 (94-202)||(17188957-17189065)
chr1 (112-206)||(17691240-17691334)
chr1 (182-228)||(21444685-21444731)
chr1 (182-228)||(22103797-22103843)
chr1 (116-202)||(34464474-34464560)
chr1 (94-195)||(17189173-17189274)
chr1 (182-227)||(25065922-25065967)
chr1 (94-203)||(40714757-40714866)
chr1 (116-205)||(46899086-46899175)
chr1 (94-203)||(49955661-49955770)
chr1 (112-228)||(183242-183358)
chr1 (94-202)||(28325119-28325226)
chr1 (83-203)||(33442586-33442706)
chr1 (116-203)||(4960825-4960912)
chr1 (116-203)||(17661877-17661963)
chr1 (116-203)||(26024708-26024795)
chr1 (117-220)||(48692313-48692416)
chr1 (90-228)||(7371289-7371427)
chr1 (182-220)||(9443663-9443701)
chr1 (182-220)||(13245941-13245979)
chr1 (182-228)||(25065024-25065070)
chr1 (94-200)||(30326499-30326605)
chr1 (182-220)||(42267394-42267432)
chr1 (94-228)||(44523427-44523561)
chr1 (182-227)||(27999143-27999188)
chr1 (94-203)||(31050953-31051062)
chr1 (94-203)||(49955350-49955459)
chr1 (124-228)||(6367853-6367957)
chr1 (94-202)||(12905974-12906082)
chr1 (116-204)||(17692500-17692588)
chr1 (182-226)||(48779208-48779252)
[»] chr2 (56 HSPs)
chr2 (86-254)||(14900717-14900883)
chr2 (88-254)||(33062284-33062450)
chr2 (88-254)||(33739700-33739866)
chr2 (129-254)||(1695974-1696099)
chr2 (129-254)||(13995907-13996032)
chr2 (129-252)||(41248795-41248918)
chr2 (117-254)||(39498336-39498473)
chr2 (110-254)||(16099074-16099218)
chr2 (116-254)||(11163288-11163426)
chr2 (124-255)||(6657911-6658042)
chr2 (116-226)||(44714054-44714164)
chr2 (116-254)||(45556137-45556275)
chr2 (116-228)||(15848113-15848225)
chr2 (124-226)||(39423548-39423650)
chr2 (124-228)||(37895638-37895742)
chr2 (145-228)||(2318212-2318295)
chr2 (116-228)||(36382186-36382298)
chr2 (86-203)||(1695735-1695852)
chr2 (90-203)||(41248558-41248671)
chr2 (116-220)||(10712748-10712852)
chr2 (88-203)||(15604336-15604451)
chr2 (117-220)||(36755119-36755222)
chr2 (89-203)||(15604653-15604767)
chr2 (116-226)||(36479743-36479853)
chr2 (117-218)||(202657-202758)
chr2 (98-203)||(33739988-33740093)
chr2 (94-202)||(11830367-11830475)
chr2 (117-205)||(21370516-21370604)
chr2 (110-210)||(22051302-22051402)
chr2 (87-203)||(33062046-33062162)
chr2 (116-228)||(44045293-44045405)
chr2 (94-201)||(28226060-28226167)
chr2 (90-220)||(6573046-6573175)
chr2 (182-228)||(11347514-11347560)
chr2 (182-228)||(11349496-11349542)
chr2 (182-228)||(11689632-11689678)
chr2 (129-203)||(13995711-13995785)
chr2 (182-220)||(17266489-17266527)
chr2 (90-203)||(8342186-8342299)
chr2 (116-205)||(25230127-25230216)
chr2 (184-228)||(6846877-6846921)
chr2 (124-228)||(10713014-10713118)
chr2 (182-218)||(25892485-25892521)
chr2 (88-203)||(8710782-8710897)
chr2 (116-203)||(13692536-13692623)
chr2 (116-203)||(36755404-36755491)
chr2 (89-203)||(8342493-8342607)
chr2 (182-220)||(10840567-10840605)
chr2 (182-220)||(11721389-11721427)
chr2 (182-220)||(17266629-17266667)
chr2 (182-228)||(25623379-25623425)
chr2 (182-227)||(25624397-25624442)
chr2 (173-244)||(36382405-36382473)
chr2 (124-220)||(3653379-3653474)
chr2 (116-228)||(6658138-6658250)
chr2 (182-218)||(6848035-6848071)
[»] scaffold0205 (2 HSPs)
scaffold0205 (94-254)||(21203-21363)
scaffold0205 (87-198)||(21005-21116)
[»] scaffold0024 (2 HSPs)
scaffold0024 (129-254)||(141828-141953)
scaffold0024 (90-203)||(141593-141706)
[»] scaffold0559 (2 HSPs)
scaffold0559 (129-254)||(1271-1396)
scaffold0559 (132-195)||(1527-1590)
[»] scaffold0020 (1 HSPs)
scaffold0020 (116-254)||(139697-139835)
[»] scaffold0007 (1 HSPs)
scaffold0007 (116-255)||(1794-1933)
[»] scaffold0031 (2 HSPs)
scaffold0031 (116-228)||(68990-69102)
scaffold0031 (116-228)||(69256-69368)
[»] scaffold0388 (1 HSPs)
scaffold0388 (90-201)||(12555-12666)
[»] scaffold0005 (1 HSPs)
scaffold0005 (182-228)||(37854-37900)
[»] scaffold0599 (1 HSPs)
scaffold0599 (94-203)||(2396-2505)
[»] scaffold0006 (2 HSPs)
scaffold0006 (91-203)||(221791-221902)
scaffold0006 (94-203)||(222103-222212)
[»] scaffold0775 (1 HSPs)
scaffold0775 (114-203)||(4985-5074)
[»] scaffold0347 (2 HSPs)
scaffold0347 (182-227)||(14557-14602)
scaffold0347 (182-220)||(13700-13738)
[»] scaffold0295 (1 HSPs)
scaffold0295 (182-226)||(2234-2278)
[»] scaffold0328 (1 HSPs)
scaffold0328 (84-202)||(11455-11573)
[»] scaffold0042 (1 HSPs)
scaffold0042 (94-228)||(12069-12203)
[»] scaffold0008 (1 HSPs)
scaffold0008 (119-227)||(239843-239951)
[»] scaffold0707 (1 HSPs)
scaffold0707 (116-203)||(6395-6482)


Alignment Details
Target: chr8 (Bit Score: 131; Significance: 5e-68; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 88 - 254
Target Start/End: Original strand, 36325231 - 36325397
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||| ||||||||||| ||||| ||||||||||| |||||||||||||||| | ||||||||||||||| ||||||||||||| |||||||||||||||    
T  36325231 aaaggcttaatgatgtgattagtccttacaattaggggtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatc 36325330  T
Q  188 atttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36325331 atttaaaatttcgtccctctccccacttaatcactgccacgccacatgaaattccaaatttacccct 36325397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 94 - 254
Target Start/End: Original strand, 11674698 - 11674857
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| ||||| ||| |||||||  ||||||||||||||| | ||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  11674698 ttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaa 11674797  T
Q  194 aatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  11674798 aatttcgtccctct-cccacttaatcactgccacgccacatgaaattccaaatttacccct 11674857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 38845658 - 38845533
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  38845658 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 38845559  T
Q  229 ccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||    
T  38845558 ccacatgaaattccaaatttacccct 38845533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 44407216 - 44407091
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||||| |||||||||| |||| || ||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44407216 tttaaaaattcatccctgtaattgctaatcctagcattttaaccctgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 44407117  T
Q  229 ccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||    
T  44407116 ccacatgaaattccaaatttacccct 44407091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 98 - 254
Target Start/End: Complemental strand, 3041846 - 3041690
Alignment:
Q  98 tgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatt 197  Q
    ||||||| |||| |||| |||||||  | | |||||||| || | |||||||||| |||| |||||| |||| |  ||||||||||||||||||||||||    
T  3041846 tgatgtgtttagctcttgcaattaggcggcatttaaaaactcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatt 3041747  T
Q  198 tcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3041746 tcgtccctctccccacttaatcactgccacgccacatgaaattccaaatttacccct 3041690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 40776009 - 40775884
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||| | |||||||||| |||| ||| || |||| |  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40776009 tttaaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 40775910  T
Q  229 ccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||    
T  40775909 ccacatgaaattccaaatttacccct 40775884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 88 - 254
Target Start/End: Original strand, 2266489 - 2266655
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||| ||| ||||||| ||||  ||| |||||||  | | ||||||||||| |  ||||||||| |||| |||||| |||| |  ||||||||||||||    
T  2266489 aaaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctggcattttaaccctgcaattgttaatc 2266588  T
Q  188 atttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
     |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2266589 gtttaaaatttcgtccctctccccacttaatcactgccacgccacatgaaattccaaatttacccct 2266655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 254
Target Start/End: Complemental strand, 23698646 - 23698509
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactta 216  Q
    |||||| |||||||||||||||  | |||||||| | |||| ||||||||||| | ||||| |  |||||||||||||||||||||||||||||||||||    
T  23698646 aattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccactta 23698547  T
Q  217 atcagtgccacgccacatgaaattccaaatttacccct 254  Q
    |||| || |||||||||||||||||||| |||||||||    
T  23698546 atcactgtcacgccacatgaaattccaattttacccct 23698509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 117 - 254
Target Start/End: Complemental strand, 1425423 - 1425287
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactta 216  Q
    ||||||||||||||||||||||  | ||||||||   |||| ||||||||||| |  |||| |  |||||||||||||||||||||||||||||||||||    
T  1425423 aattagaggtcgtttaaaaattggt-cctgtaatcactaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccactta 1425325  T
Q  217 atcagtgccacgccacatgaaattccaaatttacccct 254  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  1425324 atcactgccacgccacatgaaattccaattttacccct 1425287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 116 - 251
Target Start/End: Complemental strand, 23663917 - 23663782
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  |  ||||||| | |||| ||||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||    
T  23663917 caattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccactt 23663818  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacc 251  Q
    ||||| |||||||||| |||||||||||| ||||||    
T  23663817 aatcactgccacgccatatgaaattccaattttacc 23663782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 88 - 228
Target Start/End: Complemental strand, 36325634 - 36325494
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||||||||||||||| ||||| ||| |||||||  ||| ||||||||||| |  |||||||||||||| ||||||||||||| |||||||||||||||    
T  36325634 aaaggtttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtctctgtaattgttaatcctggcaatttagccttgcaattgttaatc 36325535  T
Q  188 atttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||| |||| |   || ||||||||| |||||||    
T  36325534 atttaaaatttggtccttggaccaacttaatcactgccacg 36325494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 239
Target Start/End: Complemental strand, 8316991 - 8316868
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | | |||||| | |||| ||||||||||| | ||||| |  |||||||||||||||||||||| |||||||||||    
T  8316991 caattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccatctccccactt 8316892  T
Q  216 aatcagtgccacgccacatgaaat 239  Q
    ||||| ||||||||||||||||||    
T  8316891 aatcactgccacgccacatgaaat 8316868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 251
Target Start/End: Complemental strand, 12273256 - 12273121
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| |||||| | | ||||||| | ||||| |  |||||||||||||||||||||||||| |||||||    
T  12273256 caattaggggtcgtttaaaaattggtccctgtaatcgttaatcccgtcaatttacccttgcattgtttaatcatttaaaatttcgtccctcttcccactt 12273157  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacc 251  Q
    ||||| |||| |||||||||||||| ||| ||||||    
T  12273156 aatcactgccgcgccacatgaaatttcaattttacc 12273121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 94 - 228
Target Start/End: Complemental strand, 11675088 - 11674954
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| ||||| ||| |||||||  ||| ||||||||||| | |||||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  11675088 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 11674989  T
Q  194 aatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||| |||| |   || ||||||||| |||||||    
T  11674988 aatttggtccttggaccaacttaatcactgccacg 11674954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 16388929 - 16388817
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||| ||||||||||  ||| |||||||| |||| ||||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||    
T  16388929 caattaggggtcatttaaaaattggttcatgtaattgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccactt 16388830  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  16388829 aatcactgccacg 16388817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 254
Target Start/End: Complemental strand, 22915751 - 22915623
Alignment:
Q  126 tcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgcc 225  Q
    |||||||||||||  | | |||||| | ||||  |||||||||| | ||||| |  |||||||||||||||| |||||||||||||||||||||| ||||    
T  22915751 tcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaattccgtccctctccccacttaatcactgcc 22915652  T
Q  226 acgccacatgaaattccaaatttacccct 254  Q
    |||||| |||||||||||| |||||||||    
T  22915651 acgccaaatgaaattccaattttacccct 22915623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 12199265 - 12199184
Alignment:
Q  173 ttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  12199265 ttgcaatcattaatcatttaaaatttcgtctctctccccacttaatcactgccacaccacatgaaattccaattttacccct 12199184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 12443693 - 12443612
Alignment:
Q  173 ttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  12443693 ttgcaatcattaatcatttaaaatttcgtctctctccccacttaatcactgccacaccacatgaaattccaattttacccct 12443612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 35449968 - 35449871
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgcca 226  Q
    ||||||||||| | | |||||||| |||| |||||| |||| |  ||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  35449968 tttaaaaattcgtccatgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctctccccatttaatcactgcca 35449871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 116 - 225
Target Start/End: Original strand, 39071701 - 39071810
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| | |||| ||| ||||||| | ||||| |  ||||||||||||||||||||||||||||||||||    
T  39071701 caattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccactt 39071800  T
Q  216 aatcagtgcc 225  Q
    ||||| ||||    
T  39071801 aatcactgcc 39071810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 38955794 - 38955866
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    |||||||||||||||||| ||||||||| |||||||||| |||||| |||||||||||||||| |||||||||    
T  38955794 ttaatcatttaaaatttcatccctctcctcacttaatcactgccacaccacatgaaattccaattttacccct 38955866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 23505055 - 23505164
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| ||||| ||| |||||||  ||| ||||||||||| | | |||||||| ||||  |||||||||| | |||||||||||||||||||||    
T  23505055 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccatgtaattgctaatcttggcaatttacccttgcaattgttaatcatttaa 23505154  T
Q  194 aatttcgtcc 203  Q
    ||||| ||||    
T  23505155 aatttggtcc 23505164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 23507850 - 23507741
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| ||||| ||| |||||||  ||| ||||||||| | | |||||||||| |||| || |||||||| | |||||||||||||||||||||    
T  23507850 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaatacgtccctgtaattgctaatccttgcaatttacccttgcaattgttaatcatttaa 23507751  T
Q  194 aatttcgtcc 203  Q
    ||||| ||||    
T  23507750 aatttggtcc 23507741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 13186085 - 13186197
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| | |||||||||||||  ||| |||||| | |||| ||| ||||||| | ||||| |  ||||||||||||||||||||| ||||||||||||    
T  13186085 caattagggatcgtttaaaaattggttcatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtctctctccccactt 13186184  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  13186185 aatcactgccacg 13186197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 4406062 - 4405959
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactta 216  Q
    |||||| ||| |||||||||||  | | |||| |||||||| || |||||||| | |||||||  |||||||||||||||||||||||||| ||||||||    
T  4406062 aattaggggttgtttaaaaattggtccatgtatttgttaatccttgcaatttacccttgcaatgtttaatcatttaaaatttcgtccctcttcccactta 4405963  T
Q  217 atca 220  Q
    ||||    
T  4405962 atca 4405959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 36928509 - 36928613
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtg 223  Q
    |||||||||||||||  |   |||||| | |||| ||| ||||||| | ||||| |  ||||||||||||||||||||||||||||||||||||||| ||    
T  36928509 ggtcgtttaaaaattggtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactg 36928608  T
Q  224 ccacg 228  Q
    |||||    
T  36928609 ccacg 36928613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 38862654 - 38862754
Alignment:
Q  127 cgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgcca 226  Q
    ||||||||| ||  ||| |||||| | |||| |||| |||||| | ||||| |  ||||||||||||||||||||||||||||||||||||||| |||||    
T  38862654 cgtttaaaatttttttcatgtaatcgctaatactggtaatttacctttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgcca 38862753  T
Q  227 c 227  Q
    |    
T  38862754 c 38862754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 40775647 - 40775762
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||| ||| ||||||| ||||  ||| |||||||  | | ||||||||||| ||||||||||||||||| |||||| |||| |  ||||||||||||||    
T  40775647 aaaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgttcctgtaattgttaatcctggcattttaaccctgcaattgttaatc 40775746  T
Q  188 atttaaaatttcgtcc 203  Q
     |||||||||| ||||    
T  40775747 gtttaaaatttggtcc 40775762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 40318367 - 40318257
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| ||| |||||||||||  | | |||||| | |||| ||||||||||| | ||||| |  |||||||||||||||||||||| ||||| |||||    
T  40318367 caattaggggttgtttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccttctcctcactt 40318268  T
Q  216 aatcagtgcca 226  Q
    ||||| |||||    
T  40318267 aatcactgcca 40318257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 234163 - 234054
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||   || ||||||||||  | ||||||||||||||| ||||||||||| | ||||| |  ||||||||||||    
T  234163 ttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaa 234064  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  234063 aatttcgtcc 234054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 710574 - 710465
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||   || ||||||||||  | ||||||||||||||| ||||||||||| | ||||| |  ||||||||||||    
T  710574 ttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaa 710475  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  710474 aatttcgtcc 710465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 747786 - 747677
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||   || ||||||||||  | ||||||||||||||| ||||||||||| | ||||| |  ||||||||||||    
T  747786 ttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaa 747687  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  747686 aatttcgtcc 747677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 871681 - 871572
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||   || ||||||||||  | ||||||||||||||| ||||||||||| | ||||| |  ||||||||||||    
T  871681 ttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaa 871582  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  871581 aatttcgtcc 871572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 31608849 - 31608804
Alignment:
Q  183 taatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  31608849 taatcatttaaaatttcgtccctctccccacttaatcactgccacg 31608804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 42945542 - 42945429
Alignment:
Q  89 aaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatca 188  Q
    |||||||||||||||| || |||||| |||||||  ||| ||||||||||  |||||||||| | |||| ||| |||||||   ||||| |  |||||||    
T  42945542 aaggtttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctgacaatttactcttgcattgtttaatca 42945443  T
Q  189 tttaaaatttcgtc 202  Q
    ||||||||||||||    
T  42945442 tttaaaatttcgtc 42945429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 10445762 - 10445650
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||||||||||| || || ||| |||||||  ||| ||||||||||  | |||||||| | |||| ||||||||||| | ||||| |  ||||||||    
T  10445762 aggtttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 10445663  T
Q  190 ttaaaatttcgtc 202  Q
    |||||||||||||    
T  10445662 ttaaaatttcgtc 10445650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 35756673 - 35756717
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgcca 226  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  35756673 ttaatcatttaaaatttcgtccctctccccacttaatcactgcca 35756717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 219
Target Start/End: Complemental strand, 4995059 - 4994957
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||| ||||||||||  | |||||||| | |||| ||| ||||||| | ||||| |  |||||||||| |||||||||||||||||||||||    
T  4995059 caattaggggtcatttaaaaattggt-cctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttcaaatttcgtccctctccccactt 4994961  T
Q  216 aatc 219  Q
    ||||    
T  4994960 aatc 4994957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 25124561 - 25124675
Alignment:
Q  89 aaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatca 188  Q
    |||||||||||||||  || |||||| |||||||  ||| ||||||||||  | | |||||| | |||| ||||||||||| | ||||| |  |||||||    
T  25124561 aaggtttaatgatgtatttcgttcttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatca 25124660  T
Q  189 tttaaaatttcgtcc 203  Q
    |||||||||||||||    
T  25124661 tttaaaatttcgtcc 25124675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 36186404 - 36186359
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccac 227  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||    
T  36186404 ttaatcatttaaaatttcgtccctctccctacttaatcactgccac 36186359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 44406856 - 44406969
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||| ||||||| ||||  ||| |||||||  | | ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||||| |    
T  44406856 aggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgt 44406955  T
Q  190 ttaaaatttcgtcc 203  Q
    ||||||||| ||||    
T  44406956 ttaaaatttggtcc 44406969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 44664511 - 44664619
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||| ||||| || || ||| |||||||  ||| ||||||||||  | |||||||| |||||| ||||||||||| | ||||| |  ||||||||||||    
T  44664511 ttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttaaccttgcattgtttaatcatttaa 44664610  T
Q  194 aatttcgtc 202  Q
    |||||||||    
T  44664611 aatttcgtc 44664619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 198
Target Start/End: Complemental strand, 2266893 - 2266782
Alignment:
Q  87 taaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaat 186  Q
    |||||| ||| ||||||| ||||  ||| |||||||  | | ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||||    
T  2266893 taaaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaat 2266794  T
Q  187 catttaaaattt 198  Q
    | ||||||||||    
T  2266793 cgtttaaaattt 2266782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 2535953 - 2535842
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||| ||||||||||  | |||||||| |||||| ||||||| ||| | || |||   ||||||||||||||||||||||||   |||||||    
T  2535953 caattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattacccttacaaagtttaatcatttaaaatttcgtcccttgacccactt 2535854  T
Q  216 aatcagtgccac 227  Q
    ||| | ||||||    
T  2535853 aatgactgccac 2535842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 203
Target Start/End: Complemental strand, 37542630 - 37542539
Alignment:
Q  112 cttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    |||||||||||  ||| ||||||||||  ||||||| || ||||||||||  |||||| | ||||| |  ||||||||||||||||||||||    
T  37542630 cttacaattaggcgtcatttaaaaattggttcctgttatcgttaattctgataatttacccttgcattgtttaatcatttaaaatttcgtcc 37542539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 38845296 - 38845411
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||||||| ||||||| |||   ||| |||||||  | | ||||||||||| | |||||||||| |||| |||||| |||| |  ||||||||||||||    
T  38845296 aaaggtttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatc 38845395  T
Q  188 atttaaaatttcgtcc 203  Q
     |||||||||| ||||    
T  38845396 gtttaaaatttggtcc 38845411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 244
Target Start/End: Original strand, 8316678 - 8316803
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | | |||| | |||||| || ||||  |||| |||||||  |||||||||||||||||||||| |   || ||||    
T  8316678 caattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaactt 8316777  T
Q  216 aatcagtgccacgccacatgaaattccaa 244  Q
    ||||| |||||   |||||||||||||||    
T  8316778 aatcactgcca---cacatgaaattccaa 8316803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 7983431 - 7983540
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||| ||||| || || ||| |||||||  ||| ||||||||||  | |||||||| | |||| ||||||||||| | ||||| |  ||||||||||||    
T  7983431 ttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 7983530  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  7983531 aatttcgtcc 7983540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 15229934 - 15230043
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||  ||| ||||||||||  | |||||||| | |||| ||||||||||| | ||| | |  ||||||||||||    
T  15229934 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttggattgtttaatcatttaa 15230033  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  15230034 aatttcgtcc 15230043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 20386833 - 20386744
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccct 205  Q
    ||||||| |||||||||||||||  | |||||| | | |||| || ||||  |||| | |||||| ||||||||||||||||||||||||    
T  20386833 caattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagcctcgcaattattaatcatttaaaatttcgtccct 20386744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 228
Target Start/End: Complemental strand, 15230360 - 15230220
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||| ||||||||||| || || ||| |||||||  ||| ||||||||||  | |||||||| | ||||  || ||||||| | ||||| |  ||||||    
T  15230360 aaaggcttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcttgacaatttacccttgcattgtttaatc 15230261  T
Q  188 atttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    |||||||||||||||| |   || ||||||||| |||||||    
T  15230260 atttaaaatttcgtcctttgaccaacttaatcactgccacg 15230220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 37542222 - 37542334
Alignment:
Q  89 aaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatca 188  Q
    |||||||||||||||| || ||  || |||||||  ||| ||||||||||  | ||| |||| | |||| ||||||||||| | ||||| |  |||||||    
T  37542222 aaggtttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctggcaatttacccttgcattgtttaatca 37542321  T
Q  189 tttaaaatttcgt 201  Q
    |||||||||||||    
T  37542322 tttaaaatttcgt 37542334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 3041453 - 3041568
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||||||| ||||||| ||||  ||| ||||||   | | ||||||||||| | | |||||||| |||| |||||| |||| |  ||||||||||||||    
T  3041453 aaaggtttattgatgtgtttagcccttgcaattaagcggcatttaaaaattcgtccatgtaattgctaatcctggcattttaaccctgcaattgttaatc 3041552  T
Q  188 atttaaaatttcgtcc 203  Q
     |||||||||| ||||    
T  3041553 gtttaaaatttggtcc 3041568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 12272943 - 12273030
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||| | |||||||||||||  |  ||||||| | |||| || ||||  |||| |||||||| ||||||||||||||||||||||    
T  12272943 caattagggatcgtttaaaaattggtctctgtaatcgctaatccttgcaaactagccttgcaattattaatcatttaaaatttcgtcc 12273030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 203
Target Start/End: Original strand, 23698342 - 23698421
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    |||||||||||||||  | |||||||| | ||||||| ||||  |||| |||||||  ||||||| ||||||||||||||    
T  23698342 ggtcgtttaaaaattagtccctgtaatcgctaattcttgcaaactagccttgcaatcattaatcagttaaaatttcgtcc 23698421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 202
Target Start/End: Complemental strand, 13186462 - 13186376
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtc 202  Q
    ||||||| |||||||||||||||  ||| |||| | | |||| || ||||  |||| |||||||  |||||||||||||||||||||    
T  13186462 caattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtc 13186376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 244
Target Start/End: Complemental strand, 38862966 - 38862841
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  |  ||||| | | |||| || ||||  |||| |||||||  |||||||||||||||||||||| |   || ||||    
T  38862966 caattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaactt 38862867  T
Q  216 aatcagtgccacgccacatgaaattccaa 244  Q
    ||||| |||||   |||||||||||||||    
T  38862866 aatcactgcca---cacatgaaattccaa 38862841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 41353575 - 41353685
Alignment:
Q  92 gtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcattt 191  Q
    |||||||||| || || || |||||||||||  ||| ||||||||||  || ||||||| | |||| ||  ||||||| | ||||| |  ||||||||||    
T  41353575 gtttaatgatatgtttcgtccttacaattaggcgtcatttaaaaattagtttctgtaatcgctaatcctaacaatttacccttgcattgtttaatcattt 41353674  T
Q  192 aaaatttcgtc 202  Q
    |||||||||||    
T  41353675 aaaatttcgtc 41353685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 2534786 - 2534831
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccac 227  Q
    |||||||||||||||||||||||| | |||| ||||||| ||||||    
T  2534786 ttaatcatttaaaatttcgtccctattcccagttaatcactgccac 2534831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 20385593 - 20385682
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccct 205  Q
    ||||||| |||||||||||||||  | |||||| | | |||| || ||||  |||  |||||||  ||||||||||||||||||||||||    
T  20385593 caattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtccct 20385682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 199
Target Start/End: Complemental strand, 25124986 - 25124881
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||| ||||| || || ||| |||||||  ||| ||||||||||  |  ||||||| | |||||||||||||||| | ||||| |  ||||||||||||    
T  25124986 ttaatcatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 25124887  T
Q  194 aatttc 199  Q
    ||||||    
T  25124886 aatttc 25124881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 35634522 - 35634413
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| ||||||   ||| ||||||||||  | |||||||| | |||| ||| ||||||| | ||||| |  ||||||||||||    
T  35634522 ttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 35634423  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  35634422 aatttcgtcc 35634413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 39474584 - 39474657
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtc 202  Q
    |||||||||| |||| |||||| | ||||  |||||||||| | ||||| |  |||||||||||||||||||||    
T  39474584 tttaaaaattaattcttgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtc 39474657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 7e-64; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 254
Target Start/End: Complemental strand, 6758266 - 6758099
Alignment:
Q  87 taaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaat 186  Q
    |||||| ||||||||||| ||||| ||| |||||||  ||||||||||||||| | ||||||||||||||||||||||||||| | ||||||||||||||    
T  6758266 taaaggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaattctggcaatttaaccttgcaattgttaat 6758167  T
Q  187 catttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6758166 catttaaaatttcgtccctctccccacttaatcactgccacgccacatgaaattccaaatttacccct 6758099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 88 - 254
Target Start/End: Original strand, 41930513 - 41930679
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||| ||||||||||| ||||| ||| |||||||||||||||||||||||  | |||||||||| |||| ||||||||||||| |||||||||||||||    
T  41930513 aaaggcttaatgatgtgattagtccttgcaattagaggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatc 41930612  T
Q  188 atttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41930613 atttaaaatttcgtccctctccccacttaatcactgccacgccacatgaaattccaaatttacccct 41930679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 297373 - 297248
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  297373 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 297274  T
Q  229 ccacatgaaattccaaatttacccct 254  Q
    ||||||||||||| ||||||||||||    
T  297273 ccacatgaaattcgaaatttacccct 297248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 129 - 254
Target Start/End: Original strand, 1506005 - 1506130
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  1506005 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 1506104  T
Q  229 ccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||    
T  1506105 ccacatgaaattccaaatttacccct 1506130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 31482761 - 31482636
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||  | |||||||||| |||| |||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  31482761 tttaaaaatttgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgccatg 31482662  T
Q  229 ccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||    
T  31482661 ccacatgaaattccaaatttacccct 31482636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 3529245 - 3529107
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| |||||| ||||||||||| |  | || |  ||||||||||||||||||||||||||||||||||    
T  3529245 caattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatcatttaaaatttcgtccctctccccactt 3529146  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| ||||||||||||| ||||||||| |||||||||    
T  3529145 aatcactgccacgccacataaaattccaattttacccct 3529107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 116 - 253
Target Start/End: Original strand, 11761774 - 11761911
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| | |||| ||||||||||| |  |||| |  |||||||||||||||||||||| |||||||||||    
T  11761774 caattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccatctccccactt 11761873  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccc 253  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  11761874 aatcattgccacgccacatgaaattccaattttacccc 11761911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 24547528 - 24547390
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | | | |||| | |||| ||||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||    
T  24547528 caattaggggtcgtttaaaaattggtccttataatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccactt 24547429  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    || || ||||||| ||||||||||||||| |||||||||    
T  24547428 aaccactgccacgtcacatgaaattccaattttacccct 24547390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 27587173 - 27587311
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| | |||| ||||||||||| |  ||||    ||||||||||||||||||||||||||||||| ||    
T  27587173 caattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcatcgtttaatcatttaaaatttcgtccctctccccattt 27587272  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| ||||||||||||| ||||||||| |||||||||    
T  27587273 aatcactgccacgccacataaaattccaattttacccct 27587311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 38475402 - 38475267
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | | |||||| |||||| ||| ||||||| | ||||| |  ||||||||||||||||||||||||||||||||||    
T  38475402 caattaggggtcgtttaaaaattggtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccactt 38475303  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| |||||   ||||||||||||||| |||||||||    
T  38475302 aatcactgcca---cacatgaaattccaattttacccct 38475267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 5993914 - 5994024
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| | |||||||||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||    
T  5993914 caattaggggtcgtttaaaaattggtccctgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccactt 5994013  T
Q  216 aatcagtgcca 226  Q
    ||||| |||||    
T  5994014 aatcactgcca 5994024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 117 - 254
Target Start/End: Complemental strand, 28771240 - 28771103
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactta 216  Q
    |||||| |||||||||||||||  | | |||||| | ||||  |||||||||| |  || | |  |||||||||||||||||||||||||||||||||||    
T  28771240 aattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgtattgtttaatcatttaaaatttcgtccctctccccactta 28771141  T
Q  217 atcagtgccacgccacatgaaattccaaatttacccct 254  Q
    |||| ||||| ||||||||||||||||| |||||||||    
T  28771140 atcactgccatgccacatgaaattccaattttacccct 28771103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 89 - 203
Target Start/End: Complemental strand, 41930915 - 41930801
Alignment:
Q  89 aaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatca 188  Q
    |||||||||||||||| ||||| |||  ||||||  ||| ||||||||||| | |||||||||| |||| || |||||||||| ||||||||||||||||    
T  41930915 aaggtttaatgatgtgattagtccttgtaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatca 41930816  T
Q  189 tttaaaatttcgtcc 203  Q
    |||||||||| ||||    
T  41930815 tttaaaatttggtcc 41930801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 32242267 - 32242379
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| ||||||||||||||| || |||||||| | ||||  ||||||||||   ||||| |  ||||||||||||||||||||||||||||||||||    
T  32242267 caattaggggtcgtttaaaaattgatccctgtaatagctaatcatggcaatttactcttgcattgtttaatcatttaaaatttcgtccctctccccactt 32242366  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  32242367 aatcactgccacg 32242379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 35512181 - 35512284
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtg 223  Q
    |||||||||||||||  | |||||||| | |||| ||||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||||||| ||    
T  35512181 ggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactg 35512280  T
Q  224 ccac 227  Q
    ||||    
T  35512281 ccac 35512284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 6150479 - 6150612
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  ||| ||||||   |||| ||| ||||||||  ||||| |  ||||||||||||||||||||||||||||||||||    
T  6150479 caattaggggtcgtttaaaaattggttcatgtaatcactaatcctgacaatttagtcttgcattgtttaatcatttaaaatttcgtccctctccccactt 6150578  T
Q  216 aatcagtgccacgccacatgaaattccaaatttaccc 252  Q
    ||||| |||||    |||||||||||||| |||||||    
T  6150579 aatcattgcca---tacatgaaattccaattttaccc 6150612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 220
Target Start/End: Original strand, 13962889 - 13962993
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||||| |||| |||| |||||| | ||||| |  |||||||||||||||||||||||||||| |||||    
T  13962889 caattaggggtcgtttaaaaattggtccctgtaattgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttcgtccctctcctcactt 13962988  T
Q  216 aatca 220  Q
    |||||    
T  13962989 aatca 13962993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 16083002 - 16083137
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| ||| |||||||||||  | |||||||| | |||| ||||||||||| | ||||| |  |||||||||||||||||||| |||||||| ||||    
T  16083002 caattaggggttgtttaaaaattagtccctgtaatcgataatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtacctctcccaactt 16083101  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| |||||   || |||||||||||| |||||||||    
T  16083102 aatcactgcca---cagatgaaattccaattttacccct 16083137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 20840558 - 20840670
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| |||||| || |||||||| | ||||| |  ||||| ||||||||||| ||||||||||||||||    
T  20840558 caattaggggtcgtttaaaaattggtacctgtaatcgttaatcctagcaatttacccttgcattgtttaatgatttaaaattttgtccctctccccactt 20840657  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  20840658 aatcactgccacg 20840670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 35920587 - 35920452
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| | |||| ||| ||||||| | || || |  ||||||||||||||||||||||||||||||||||    
T  35920587 caattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttatccttccattgtttaatcatttaaaatttcgtccctctccccactt 35920488  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| || ||    |||||||||||||| |||||||||    
T  35920487 aatcactgtca---tacatgaaattccaattttacccct 35920452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 220
Target Start/End: Original strand, 39453325 - 39453429
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  |  ||||||| | |||| ||||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||    
T  39453325 caattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccactt 39453424  T
Q  216 aatca 220  Q
    |||||    
T  39453425 aatca 39453429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 19892711 - 19892599
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    |||||||||||||||||||||||  |  ||||||| |||||| ||  ||||||| | ||||| |  |||||||||||||||||||||  |||||||||||    
T  19892711 caattagaggtcgtttaaaaattggtctctgtaatcgttaatcctaacaatttacccttgcattgtttaatcatttaaaatttcgtcattctccccactt 19892612  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  19892611 aatcactgccacg 19892599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 186445 - 186548
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactta 216  Q
    |||||| |||||||||||||||  |   |||||| ||||||||||| |||||| | ||||| |  ||||||||||||||||||||||||| |||||||||    
T  186445 aattaggggtcgtttaaaaattagtcattgtaatcgttaattctggaaatttaaccttgcattgtttaatcatttaaaatttcgtccctccccccactta 186544  T
Q  217 atca 220  Q
    ||||    
T  186545 atca 186548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 5024421 - 5024310
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  |   |||||| | |||| ||| ||||||| ||||||| |  |||||||||||||||||||| |||||||||||||    
T  5024421 caattaggggtcgtttaaaaattggtcattgtaatcgctaatcctgacaatttaccattgcattgtttaatcatttaaaatttcgttcctctccccactt 5024322  T
Q  216 aatcagtgccac 227  Q
    ||||| ||||||    
T  5024321 aatcactgccac 5024310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 219
Target Start/End: Complemental strand, 16157258 - 16157155
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | ||| |||| |||||| ||| ||||||| | ||||| |  ||||||||||||||||| ||||||||||||||||    
T  16157258 caattaggggtcgtttaaaaattggtccctataatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaattttgtccctctccccactt 16157159  T
Q  216 aatc 219  Q
    ||||    
T  16157158 aatc 16157155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 91 - 228
Target Start/End: Original strand, 6757865 - 6758002
Alignment:
Q  91 ggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatt 190  Q
    |||||| ||| ||| ||||| ||| |||||||  ||| ||||||||||  | |||||||||| |||| ||||||||||||  | ||||||||||||||||    
T  6757865 ggtttattgacgtgattagtccttgcaattaggcgtcatttaaaaatttgtccctgtaattgctaatcctggcaatttagtctcgcaattgttaatcatt 6757964  T
Q  191 taaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    |||||||| |||| |   || ||||||||| |||||||    
T  6757965 taaaatttggtccttggaccaacttaatcactgccacg 6758002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 14194797 - 14194722
Alignment:
Q  145 tgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    |||||||  |||| ||||||||||| | ||||| |  |||||||||||||||||||||||||||||||||||||||    
T  14194797 tgtaattactaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatca 14194722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 17202424 - 17202534
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  |  ||||||| | |||| ||| ||||||| | ||||| |  |||| |||||||||||||||||| ||||||||||    
T  17202424 caattaggggtcgtttaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaagcatttaaaatttcgtccccctccccactt 17202523  T
Q  216 aatcagtgcca 226  Q
    ||||| |||||    
T  17202524 aatcactgcca 17202534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 18670290 - 18670359
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    |||||||||||||||||||||| |||||||||||||||| |||||    |||||||||||||| |||||||||    
T  18670290 ttaatcatttaaaatttcgtccatctccccacttaatcattgcca---tacatgaaattccaattttacccct 18670359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 17544471 - 17544362
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||  ||| ||||||||||  |||||||||| |||||| ||||||||||| | ||||| |  ||||||||||||    
T  17544471 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaa 17544372  T
Q  194 aatttcgtcc 203  Q
    ||||| ||||    
T  17544371 aattttgtcc 17544362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 220
Target Start/End: Original strand, 18247111 - 18247213
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | | |||||| | |||||  ||||||||| | ||||| |  ||||||||||| ||||||||||||||||||||||    
T  18247111 caattaggggtcgtttaaaaattggtccatgtaatcgctaatt--ggcaatttacccttgcattatttaatcatttagaatttcgtccctctccccactt 18247208  T
Q  216 aatca 220  Q
    |||||    
T  18247209 aatca 18247213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 38442159 - 38442204
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccac 227  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  38442159 ttaatcatttaaaatttcgtccctctccccacttaatcactgccac 38442204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 8322473 - 8322533
Alignment:
Q  160 tggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    |||||||||| | ||||| |  |||||||||||||||||||||||||||||||||||||||    
T  8322473 tggcaatttatccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatca 8322533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 220
Target Start/End: Complemental strand, 13362631 - 13362527
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | | |||||| | ||||  |||||||||| | ||||| |  ||||||||||||||||| ||| ||||||||||||    
T  13362631 caattaggggtcgtttaaaaattggtccttgtaatcgctaatcatggcaatttacccttgcattgtttaatcatttaaaatttagtctctctccccactt 13362532  T
Q  216 aatca 220  Q
    |||||    
T  13362531 aatca 13362527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 28269725 - 28269681
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgcca 226  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  28269725 ttaatcatttaaaatttcgtccctctccccacttaatcactgcca 28269681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 29646736 - 29646661
Alignment:
Q  145 tgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    |||||| | |||| ||| ||||||| | ||||| |  |||||||||||||||||||||||||||||||||||||||    
T  29646736 tgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatca 29646661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 203
Target Start/End: Complemental strand, 1506366 - 1506252
Alignment:
Q  89 aaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatca 188  Q
    |||||||| ||||||| ||||  ||| |||||||  | | ||||||||||| | |||||||||| |||| |||||| |||| |  ||||||||||||||     
T  1506366 aaggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcg 1506267  T
Q  189 tttaaaatttcgtcc 203  Q
    |||||||||| ||||    
T  1506266 tttaaaatttggtcc 1506252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 11047506 - 11047572
Alignment:
Q  160 tggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgcca 226  Q
    |||||||||| | ||||| |  ||||||||||||||||||||| ||||||||||||||||| |||||    
T  11047506 tggcaatttacccttgcattgtttaatcatttaaaatttcgtctctctccccacttaatcactgcca 11047572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 20814538 - 20814428
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  |  ||||||| | |||| || ||||||||   ||||| |  ||||||||||||||||| ||||||||||| ||||    
T  20814538 caattaggggtcgtttaaaaattggtcactgtaatcgctaatcctagcaatttacacttgcattgtttaatcatttaaaattttgtccctctccctactt 20814439  T
Q  216 aatcagtgcca 226  Q
    ||||| |||||    
T  20814438 aatcactgcca 20814428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 24141477 - 24141566
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccct 205  Q
    |||||||| ||| ||||||||||  | |||||||| |||||| ||||||| ||||| ||||||   |||||||||||||||||| |||||    
T  24141477 caattagacgtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatcatttaaaatttcatccct 24141566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 33871342 - 33871451
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| ||||||   ||| ||||||||||  | |||||||| | |||||||||||||||| | ||||| |  ||||||||||||    
T  33871342 ttaatgatgtgttttgtccttgcaattaagtgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaa 33871441  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  33871442 aatttcgtcc 33871451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 3528898 - 3529010
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||| ||| |||| || ||||  |||| ||||||| |||||||||||||||||| |||| |   || ||||    
T  3528898 caattaggggtcgtttaaaaattggtccctgtatttgctaatccttgcaaactagccttgcaatcgttaatcatttaaaatttagtcctttgaccaactt 3528997  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  3528998 aatcactgccacg 3529010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 186822 - 186735
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    |||||||||||||||||||||||  | |||||| ||| ||||  | ||||  |||| |||||||  ||||||||||||||||||||||    
T  186822 caattagaggtcgtttaaaaattggtccctgtatttgctaatctttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 186735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 12904845 - 12904883
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  12904845 ttaataatttaaaatttcgtccctctccccacttaatca 12904883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 31482440 - 31482514
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||||| |||||||||| ||||    
T  31482440 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttggtcc 31482514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 14849044 - 14848999
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccac 227  Q
    ||||||||||||||||| ||||||| ||||||||||||| ||||||    
T  14849044 ttaatcatttaaaatttggtccctcaccccacttaatcactgccac 14848999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 201
Target Start/End: Original strand, 8875439 - 8875559
Alignment:
Q  81 atttattaaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaatt 180  Q
    ||||||| | || ||||||||||| || || ||| ||||||   ||| ||||||||||  | |||||||| |||||| |||||||||||   ||||| |     
T  8875439 atttatttatggcttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacacttgcattg 8875538  T
Q  181 gttaatcatttaaaatttcgt 201  Q
     ||||||||||||||||||||    
T  8875539 tttaatcatttaaaatttcgt 8875559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 21265168 - 21265280
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    |||||||||||||||||||||||  | | |||| ||| |||| || ||||  |||| |||||||  ||||| |||||||||||||||| |   || ||||    
T  21265168 caattagaggtcgtttaaaaattggtccatgtatttgctaatccttgcaaactagccttgcaatcattaattatttaaaatttcgtcctttgaccaactt 21265267  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  21265268 aatcactgccacg 21265280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 8322807 - 8322720
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||| |||||||||||||||  | || ||| | |||||| || ||||  |||| |||||||  ||||||||||||||||||||||    
T  8322807 caattaggggtcgtttaaaaattggtccccgtattcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 8322720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 37991224 - 37991311
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||| |||||||||||||||  | |||||| | |||||| || ||||  |||| |||||||  |||||||||| |||||||||||    
T  37991224 caattaggggtcgtttaaaaattggtccctgtattcgttaatccttgcaaactagccttgcaatcattaatcatttcaaatttcgtcc 37991311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 297052 - 297126
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||||||| | |||||||||| |||| |||| | |||| |  |||||||||||||| |||||||||| ||||    
T  297052 tttaaaaattcgtccctgtaattgctaatcctggtattttaaccctgcaattgttaatcgtttaaaatttggtcc 297126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 14848830 - 14848868
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  14848830 ttaatcatttaaaatttggtccctccccccacttaatca 14848868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 15645049 - 15645004
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccac 227  Q
    ||||||||||||||||||||||||   |||||||||||| ||||||    
T  15645049 ttaatcatttaaaatttcgtccctacacccacttaatcactgccac 15645004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 6150823 - 6150711
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | | |||| | ||||||  | ||||  |||| |||||||  |||||||||||||||||||||| |   || ||||    
T  6150823 caattaggggtcgtttaaaaattagtccatgtattcgttaatctttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaactt 6150724  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  6150723 aatcactgccacg 6150711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 11762120 - 11762008
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||| | | |||| || ||||  |||| |||||||  ||||||||||||||||| |||| |   || ||||    
T  11762120 caattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaactt 11762021  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  11762020 aatcactgccacg 11762008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 207
Target Start/End: Complemental strand, 21265549 - 21265453
Alignment:
Q  112 cttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaa-tttagcattgcaattgttaatcatttaaaatttcgtccctct 207  Q
    ||||||||||  |||||||||||||||  |||||||||| | ||||  |||||| |||| | ||||| |  ||||| ||||||||||||||| ||||    
T  21265549 cttacaattaagggtcgtttaaaaattggttcctgtaatcgctaatcgtggcaattttacccttgcattgtttaattatttaaaatttcgtctctct 21265453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 28269447 - 28269559
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | || ||| | | |||| || ||||  |||| |||||||  |||||||||||||||||||||| |   || ||||    
T  28269447 caattaggggtcgtttaaaaattggtcccagtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaactt 28269546  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  28269547 aatcactgccacg 28269559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 7e-64; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 90 - 253
Target Start/End: Complemental strand, 10770889 - 10770726
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||||||||||| ||||| |||||||||||  ||| ||||||||||| | ||||||||||||||| ||||||||||||| |||||||||||||||||    
T  10770889 aggtttaatgatgtgattagtccttacaattaggcgtcatttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcat 10770790  T
Q  190 ttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccc 253  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10770789 ttaaaatttcgtccctctccccacttaatcactgccacgccacatgaaattccaaatttacccc 10770726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 94 - 254
Target Start/End: Complemental strand, 36314692 - 36314532
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| ||||| ||| |||||||  ||||||||||||||| | ||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  36314692 ttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaa 36314593  T
Q  194 aatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36314592 aatttcgtccctctccccacttaatcactgccacgccacatgaaattccaaatttacccct 36314532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 94 - 254
Target Start/End: Complemental strand, 48322771 - 48322611
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| ||||| ||| |||||||  ||||||||||||||| | ||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  48322771 ttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaa 48322672  T
Q  194 aatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  48322671 aatttcgtccctctccccacttaatcactgccacgccacatgaaattccaaatttacccct 48322611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 90 - 254
Target Start/End: Original strand, 54466422 - 54466586
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||| ||||||| ||||  ||| |||||||  | | ||||||||||| | ||||||||||||||| |||||| |||| |  ||||||||||||||||    
T  54466422 aggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcattttaaccctgcaattgttaatcat 54466521  T
Q  190 ttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  54466522 ttaaaatttcgtccctctccccacttaatcactgccacgccacatgaaattccaaatttacccct 54466586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 129 - 254
Target Start/End: Original strand, 8041654 - 8041779
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8041654 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 8041753  T
Q  229 ccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||    
T  8041754 ccacatgaaattccaaatttacccct 8041779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 2796204 - 2796342
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||| ||||||||||  | |||||||| | |||| ||||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||    
T  2796204 caattaggggtcatttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccactt 2796303  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  2796304 aatcactgccacgccacatgaaattccaattttacccct 2796342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 253
Target Start/End: Complemental strand, 51994289 - 51994152
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| | |||||||||||||  | | |||||| | |||||||||||||||| |  |||| |  ||||||||||||||||||||||||||||||||||    
T  51994289 caattagggatcgtttaaaaattggtccttgtaatcgctaattctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccactt 51994190  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccc 253  Q
    ||||| ||||||| ||||||||||||||| ||||||||    
T  51994189 aatcactgccacgtcacatgaaattccaattttacccc 51994152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 19741295 - 19741157
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| | ||||  |||||||||| | ||| | |  ||||||||||||||||||||| ||||||||||||    
T  19741295 caattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccttgtattgtttaatcatttaaaatttcgtcactctccccactt 19741196  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| ||||||||||||||||| ||||| |||||||||    
T  19741195 aatcactgccacgccacatgaaaatccaattttacccct 19741157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 10770489 - 10770602
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||||||||||| ||||| ||| |||||||  ||| ||||||||||| | |||||||||| |||| ||||||||||||| |||||||||||||||||    
T  10770489 aggtttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcat 10770588  T
Q  190 ttaaaatttcgtcc 203  Q
    ||||||||| ||||    
T  10770589 ttaaaatttggtcc 10770602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 94 - 228
Target Start/End: Original strand, 36314301 - 36314435
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| ||||| ||| |||||||  ||| ||||||||||| | |||||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  36314301 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 36314400  T
Q  194 aatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||| |||| |   || ||||||||| |||||||    
T  36314401 aatttggtccttggaccaacttaatcactgccacg 36314435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 94 - 228
Target Start/End: Original strand, 48322380 - 48322514
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| ||||| ||| ||||||||  || ||||||||||| | |||||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  48322380 ttaatgatgtgattagtccttgcaattagacatcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 48322479  T
Q  194 aatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||| |||| |   || ||||||||| |||||||    
T  48322480 aatttggtccttggaccaacttaatcactgccacg 48322514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 33689782 - 33689670
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  ||| |||||| | |||| ||||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||    
T  33689782 caattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacccttgcattatttaatcatttaaaatttcgtccctctccccactt 33689683  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  33689682 aatcactgccacg 33689670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 252
Target Start/End: Complemental strand, 40033859 - 40033726
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  || || |||||| |||| ||||||||||| | ||||| |  ||||||||||||||||| ||||||||||||||||    
T  40033859 caattaggggtcgtttaaaaattggtttctataattgctaatcctggcaatttacccttgcattgtttaatcatttaaaattttgtccctctccccactt 40033760  T
Q  216 aatcagtgccacgccacatgaaattccaaatttaccc 252  Q
    ||||| || ||   ||||||||||||||| |||||||    
T  40033759 aatcactgtca---cacatgaaattccaattttaccc 40033726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 254
Target Start/End: Complemental strand, 55052622 - 55052513
Alignment:
Q  145 tgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaa 244  Q
    |||||| ||||||  |||||||||| |  |||| |  ||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||    
T  55052622 tgtaatcgttaatcatggcaatttacctctgcattgtttaatcatttaaaatttcgtccctctccccatttaatcactaccacgccacatgaaattccaa 55052523  T
Q  245 atttacccct 254  Q
     |||||||||    
T  55052522 ttttacccct 55052513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 46474840 - 46474975
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  |  ||||||| | ||||  |||||||||| ||||||| |  ||||||||||||||||| ||||||||||||||||    
T  46474840 caattaggggtcgtttaaaaattggtctctgtaatcgctaatcttggcaatttaccattgcattgtttaatcatttaaaattttgtccctctccccactt 46474939  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| |||||    |||||||||||||| |||||||||    
T  46474940 aatcactgcca---tacatgaaattccaattttacccct 46474975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 220
Target Start/End: Complemental strand, 9294361 - 9294257
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | ||| |||| | |||| ||||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||    
T  9294361 caattaggggtcgtttaaaaattggtccctataatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccactt 9294262  T
Q  216 aatca 220  Q
    |||||    
T  9294261 aatca 9294257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 23458374 - 23458271
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtg 223  Q
    |||||||||||||||  |  ||||||| | |||| || |||||||| | ||||| |  ||||||||||||||||||||||||||||||||||||||| ||    
T  23458374 ggtcgtttaaaaattggtctctgtaatcgctaatccttgcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactg 23458275  T
Q  224 ccac 227  Q
    ||||    
T  23458274 ccac 23458271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 228
Target Start/End: Complemental strand, 33156423 - 33156285
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||||||||||| || || ||| |||||||  ||| ||||||||||  |   |||||| ||||||  |||||||||| | || || |  ||||||||    
T  33156423 aggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcattgtaatcgttaatcttggcaatttaccctttcattgtttaatcat 33156324  T
Q  190 ttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  33156323 ttaaaatttcgtccctccccccacttaatcactgccacg 33156285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 207
Target Start/End: Original strand, 42342812 - 42342907
Alignment:
Q  112 cttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctct 207  Q
    ||||||||||| |||||||||||||||  | | |||||||| || | ||||||||||| | ||||| |  ||||||||||||||||||||||||||    
T  42342812 cttacaattaggggtcgtttaaaaattggtccatgtaattgctagtcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctct 42342907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 50272719 - 50272770
Alignment:
Q  39 cttgttattcattatgatgcgaccatgtttctatattttgctatttattaaa 90  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  50272719 cttgttattcattattatgtgaccatgtttctatattttgctatttattaaa 50272770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 11910702 - 11910811
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||| ||| |||||||||| || |||||||| | |||| || |||||||| | ||||| |  ||||||||||||    
T  11910702 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaa 11910801  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  11910802 aatttcgtcc 11910811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 228
Target Start/End: Complemental strand, 37778702 - 37778562
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||| ||||||||||| || || ||| |||||||  ||| ||||||||||  | |||||||||| |||| ||||||||||| | ||||| |  ||||||    
T  37778702 aaaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatc 37778603  T
Q  188 atttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    |||||||||||| ||| |   || ||||||||| |||||||    
T  37778602 atttaaaatttcatcctttgaccaacttaatcactgccacg 37778562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 220
Target Start/End: Original strand, 53756769 - 53756873
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| ||||||||||||||| |||| |||||| ||||||  | | |||||| | ||||| |  |||||||||||||||||||||| ||| |||| ||    
T  53756769 caattaggggtcgtttaaaaattgattcatgtaatcgttaatcttagtaatttacccttgcattgtttaatcatttaaaatttcgtccatcttcccattt 53756868  T
Q  216 aatca 220  Q
    |||||    
T  53756869 aatca 53756873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 43384321 - 43384412
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    ||||||||||  | |||||||| | |||| ||| ||||||| | ||||| |  ||||||||||||||||||||| |||||||||||||||||    
T  43384321 tttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtctctctccccacttaatca 43384412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 228
Target Start/End: Original strand, 9367764 - 9367878
Alignment:
Q  114 tacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccac 213  Q
    ||||||||| ||||||||||||| |  |  ||||| | | |||| || ||||  |||| |||||||| |||||||||||||||||||||||||  ||||     
T  9367764 tacaattaggggtcgtttaaaaaatggtctctgtattcgctaatccttgcaaactagccttgcaattattaatcatttaaaatttcgtccctcatcccaa 9367863  T
Q  214 ttaatcagtgccacg 228  Q
    ||||||| |||||||    
T  9367864 ttaatcactgccacg 9367878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 26463935 - 26463897
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26463935 ttaatcatttaaaatttcgtccctctccccacttaatca 26463897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 40758235 - 40758273
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40758235 ttaatcatttaaaatttcgtccctctccccacttaatca 40758273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 47551491 - 47551601
Alignment:
Q  89 aaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatca 188  Q
    |||| ||||||||||| || || ||| |||||||| ||| ||||||||||  | |||||||| | |||| ||||||||||| | ||||| |  |||||||    
T  47551491 aaggcttaatgatgtgtttcgtccttgcaattagatgtcatttaaaaattagtccctgtaatcgctaatactggcaatttacccttgcattgtttaatca 47551590  T
Q  189 tttaaaatttc 199  Q
    |||||||||||    
T  47551591 tttaaaatttc 47551601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 228
Target Start/End: Complemental strand, 29118960 - 29118827
Alignment:
Q  95 taatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaa 194  Q
    |||||||||| || || ||| |||||||  ||| ||||||||||  |  ||||||| | |||| ||||||||||| ||||||| |  |||||||||||||    
T  29118960 taatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaatcctggcaatttaccattgcattgtttaatcatttaaa 29118861  T
Q  195 atttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||| |   || ||||||||| |||||||    
T  29118860 atttcgtcctttgaccaacttaatcactgccacg 29118827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 52032137 - 52032250
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||||||||||| || || ||| |||||||  ||| |||||||||| || | |||||| | |||| || |||||||| | ||||| |  ||||||||    
T  52032137 aggtttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattaatccttgtaatcgctaatcctagcaatttacccttgcattgtttaatcat 52032236  T
Q  190 ttaaaatttcgtcc 203  Q
    ||||||||||||||    
T  52032237 ttaaaatttcgtcc 52032250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 52032570 - 52032457
Alignment:
Q  86 ttaaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaa 185  Q
    ||||||| ||||||||||| || || ||| |||||||| ||| ||||||||||  | |||||||| | |||| |||||||| || | ||||| |  ||||    
T  52032570 ttaaaggcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatatacccttgcattgtttaa 52032471  T
Q  186 tcatttaaaatttc 199  Q
    ||||||||||||||    
T  52032470 tcatttaaaatttc 52032457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 204
Target Start/End: Complemental strand, 1079624 - 1079536
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccc 204  Q
    ||||||| |||| ||||||||||  | |||||||| |||||| ||||||| ||||| ||||||   |||||| ||||||||||||||||    
T  1079624 caattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatcttttaaaatttcgtccc 1079536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 220
Target Start/End: Complemental strand, 21186098 - 21185994
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||| ||||||||||  | | |||||| |||||| ||||||| ||| | ||||||   ||||||||||||||||||||||||   |||||||    
T  21186098 caattaggggtcatttaaaaattggtacatgtaatcgttaatcctggcaaattacccttgcaaaccttaatcatttaaaatttcgtcccttgacccactt 21185999  T
Q  216 aatca 220  Q
    |||||    
T  21185998 aatca 21185994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 40506182 - 40506086
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    |||| ||||||| ||  |||||||||| |||||| ||| ||||||| | || || |  ||||||||||||||||||||| |||||| ||||||||||    
T  40506182 ggtcatttaaaagttggttcctgtaatcgttaatcctgacaatttacccttacattatttaatcatttaaaatttcgtctctctccgcacttaatca 40506086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 203
Target Start/End: Complemental strand, 54466820 - 54466708
Alignment:
Q  91 ggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatt 190  Q
    |||||| ||||||| ||||  ||| |||||||  | | ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||||| ||    
T  54466820 ggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattggtaatcctggcattttaaccctgcaattgttaatcgtt 54466721  T
Q  191 taaaatttcgtcc 203  Q
    |||||||| ||||    
T  54466720 taaaatttggtcc 54466708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 36418090 - 36418004
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    |||||| |||||||||||||||  |||||||| | | |||| || ||||  |||| |||||||  ||||||||||||||||||||||    
T  36418090 aattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 36418004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 47921504 - 47921578
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||||||| | |||||||||||||||  ||||| |||| |  |||||||||||||| |||||||||| ||||    
T  47921504 tttaaaaattcgtccctgtaattgttaatcttggcattttaaccctgcaattgttaatcgtttaaaatttggtcc 47921578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 3469623 - 3469514
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    |||||||| || || || ||| |||||||  ||| ||||||||||  |||||||||| | |||| ||||||||||| | ||||| |  ||||||||||||    
T  3469623 ttaatgatctgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 3469524  T
Q  194 aatttcgtcc 203  Q
    |||| |||||    
T  3469523 aattccgtcc 3469514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 203
Target Start/End: Complemental strand, 8042014 - 8041901
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||| ||||||| ||||  ||| |||||||  | | |||||| |||| | |||||||||| |||| |||||| |||| |  |||||||||||||| |    
T  8042014 aggtttattgatgtgtttagcccttgcaattaggcggcatttaaatattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgt 8041915  T
Q  190 ttaaaatttcgtcc 203  Q
    ||||||||| ||||    
T  8041914 ttaaaatttggtcc 8041901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 10294988 - 10294875
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||| ||||||||||| || || ||| |||| ||| ||  ||||||||||  |||||||||| | |||| || |||||||| | ||||| |  ||||||    
T  10294988 aaaggcttaatgatgtgtttcgtccttgcaatcagacgtaatttaaaaattagttcctgtaatcgctaatcctcgcaatttacccttgcattgtttaatc 10294889  T
Q  188 atttaaaatttcgt 201  Q
    ||||||||||||||    
T  10294888 atttaaaatttcgt 10294875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 41988053 - 41988098
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccac 227  Q
    ||||||||||||||||||||| |||||| |||||||||| ||||||    
T  41988053 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccac 41988098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 43998199 - 43998256
Alignment:
Q  145 tgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtc 202  Q
    |||||| |||||||||||||||||| | ||||| |  |||||||||||||||||||||    
T  43998199 tgtaatcgttaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 43998256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 4323605 - 4323493
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    |||||||  ||||||||||||||| | |||||||| | |||| ||||||| ||| | ||||| |  |||||||||||||| |||||| ||   |||||||    
T  4323605 caattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaaaaattcgtcactgaacccactt 4323506  T
Q  216 aatcagtgccacg 228  Q
    ||| | |||||||    
T  4323505 aatgactgccacg 4323493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 203
Target Start/End: Original strand, 32306420 - 32306536
Alignment:
Q  87 taaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaat 186  Q
    |||||| ||||||||||| || || ||| |||||||  ||| ||||||||||  ||| |||||| | ||||  || ||||||| | ||||| |  |||||    
T  32306420 taaaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcttgacaatttacccttgcattgtttaat 32306519  T
Q  187 catttaaaatttcgtcc 203  Q
    |||||||||||||||||    
T  32306520 catttaaaatttcgtcc 32306536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 202
Target Start/End: Original strand, 41421971 - 41422083
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||||||||||| || || ||| |||||||  |||  |||||||||  |||||||||| ||||||  || ||||||| | || || |  ||||||||    
T  41421971 aggtttaatgatgtgtttcgtccttgcaattaggcgtcagttaaaaattagttcctgtaatcgttaatcttgacaatttacccttacattgtttaatcat 41422070  T
Q  190 ttaaaatttcgtc 202  Q
    |||||||||||||    
T  41422071 ttaaaatttcgtc 41422083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 228
Target Start/End: Complemental strand, 46475187 - 46475072
Alignment:
Q  112 cttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctcccc 211  Q
    ||||||||||| ||||||||||||||| || | |||| | | |||| || ||||  |||| |||||||  |||||||||||||||||||||| |   ||     
T  46475187 cttacaattaggggtcgtttaaaaattgatac-tgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacca 46475089  T
Q  212 acttaatcagtgccacg 228  Q
    ||||||||| |||||||    
T  46475088 acttaatcactgccacg 46475072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 19740948 - 19741035
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||| | |||||||||||||  | |||||||| | |||| || ||||  |||| |||||||  ||||||||||||||||||||||    
T  19740948 caattagggatcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 19741035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 228
Target Start/End: Complemental strand, 40788848 - 40788709
Alignment:
Q  89 aaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatca 188  Q
    |||| ||||||||||| || || ||| |||||||  ||| ||||||||||  | |||||||| | |||| |||||||||||   ||||| |  ||||||     
T  40788848 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttactcttgcattgtttaatct 40788749  T
Q  189 tttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||||||| |   || ||||||||| |||||||    
T  40788748 tttaaaatttcgtcctttgaccaacttaatcactgccacg 40788709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 41558285 - 41558198
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||| ||||||||||||||| || | |||| | | |||| || |||| ||||  |||||||  ||||||||||||||||||||||    
T  41558285 caattaggggtcgtttaaaaattaatccatgtattcgctaatccttgcaaattagtcttgcaatcattaatcatttaaaatttcgtcc 41558198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 198
Target Start/End: Complemental strand, 8741348 - 8741314
Alignment:
Q  164 aatttagcattgcaattgttaatcatttaaaattt 198  Q
    |||||||| ||||||||||||||||||||||||||    
T  8741348 aatttagccttgcaattgttaatcatttaaaattt 8741314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 20704521 - 20704559
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  20704521 ttaatcacttaaaattccgtccctctccccacttaatca 20704559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 20704664 - 20704626
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  20704664 ttaatcacttaaaatttcgtccctcttcccacttaatca 20704626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 25107296 - 25107350
Alignment:
Q  174 tgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||| |||||||||||||||||||||||||||  | || ||||||| |||||||    
T  25107296 tgcaaatgttaatcatttaaaatttcgtccctcatcacagttaatcactgccacg 25107350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 29192126 - 29192172
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    |||||||||||||||||||||||||| |||  ||||||| |||||||    
T  29192126 ttaatcatttaaaatttcgtccctcttcccgattaatcactgccacg 29192172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 30380937 - 30380983
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||||||||||||||||||  |||||| |||| |||||||    
T  30380937 ttaatcatttaaaatttcgtccctctgtccacttgatcactgccacg 30380983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 32717114 - 32717068
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    |||||||||||||||||||||||||| |||| ||||| | |||||||    
T  32717114 ttaatcatttaaaatttcgtccctcttcccaattaattactgccacg 32717068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 36417714 - 36417800
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    |||||| |||||||||||||||  | |||||| | | |||| || ||||  |||| |||||||  ||||||||||||||||||||||    
T  36417714 aattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 36417800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 39399429 - 39399383
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    |||||||||||||||||| || ||||||||| ||||||| |||||||    
T  39399429 ttaatcatttaaaatttcatctctctccccagttaatcactgccacg 39399383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 244
Target Start/End: Complemental strand, 42343126 - 42343009
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtg 223  Q
    ||||||||||||||| || | |||| | | ||||  | |||| ||||  |||||||  |||||||||||||||||||||| |   || ||||||||||||    
T  42343126 ggtcgtttaaaaattgatccatgtattcgctaatctttgcaaattagtcttgcaatgattaatcatttaaaatttcgtcctttgaccaacttaatcagtg 42343027  T
Q  224 ccacgccacatgaaattccaa 244  Q
    |||   |||||||||||||||    
T  42343026 cca---cacatgaaattccaa 42343009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 44654840 - 44654802
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    ||||||| ||||||||||||||||||||||| |||||||    
T  44654840 ttaatcacttaaaatttcgtccctctccccatttaatca 44654802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 54317968 - 54317922
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||||||||||||| ||||||| | ||||||| |||||||    
T  54317968 ttaatcatttaaaatttcgtctctctccctaattaatcactgccacg 54317922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 10294570 - 10294679
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||  ||| ||||||||||  | |||||||||| ||||  || ||||||| | ||| | |  ||||||||||||    
T  10294570 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcatgacaatttacccttgtattgtttaatcatttaa 10294669  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  10294670 aatttcgtcc 10294679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 125 - 202
Target Start/End: Complemental strand, 47857639 - 47857562
Alignment:
Q  125 gtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtc 202  Q
    |||||||||||||| ||   |||||| ||||||||||| || ||| | ||||||   |||||||||||||||||||||    
T  47857639 gtcgtttaaaaattgatctttgtaatcgttaattctggtaaattatccttgcaaagtttaatcatttaaaatttcgtc 47857562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 203
Target Start/End: Original strand, 3469196 - 3469312
Alignment:
Q  87 taaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaat 186  Q
    |||||| ||||||||||| || ||  || |||||||  ||| ||||||||||  | | ||||||   |||| ||||||||||| | ||||| |  |||||    
T  3469196 taaaggcttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcctggcaatttacccttgcattgtttaat 3469295  T
Q  187 catttaaaatttcgtcc 203  Q
    |||||||||||||||||    
T  3469296 catttaaaatttcgtcc 3469312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 23458012 - 23458116
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtg 223  Q
    |||||||||||||||  | |||||| | | |||| || ||||  |||| |||||||  |||||||||||||||||||||| |   || ||||||||| ||    
T  23458012 ggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaataattaatcatttaaaatttcgtcctttgaccaacttaatcactg 23458111  T
Q  224 ccacg 228  Q
    |||||    
T  23458112 ccacg 23458116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 32306847 - 32306739
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||  ||| ||||||||||  |   |||||| | |||| ||||||||||| | ||||| |  ||||||||||||    
T  32306847 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 32306748  T
Q  194 aatttcgtc 202  Q
    |||||||||    
T  32306747 aatttcgtc 32306739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 32431594 - 32431506
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccct 205  Q
    |||||| |||| ||||||||||  | |||| ||| |||||| ||| ||| ||||| ||||||   |||| |||||||||||||||||||    
T  32431594 aattaggggtcatttaaaaattggtccctgcaatcgttaatcctgacaaattagccttgcaaagtttaaccatttaaaatttcgtccct 32431506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 88 - 254
Target Start/End: Original strand, 27934529 - 27934695
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||| ||||||||||| ||||| ||| ||||||| |||||||||||||||  | |||||||||| |||| ||||||||||||| |||||||||||||||    
T  27934529 aaaggcttaatgatgtgattagtccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatc 27934628  T
Q  188 atttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  27934629 atttaaaatttcgtccctctccccacttaatcactgccacgccacatgaaattccaattttacccct 27934695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 94 - 254
Target Start/End: Complemental strand, 9400913 - 9400753
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| ||||| ||| ||||||| |||||||||||||||| | |||||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  9400913 ttaatgatgtgattagtccttgcaattaggggtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 9400814  T
Q  194 aatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  9400813 aatttcatccctctccccacttaatcactgccacgccacatgaaattacaaatttacccct 9400753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 94 - 254
Target Start/End: Complemental strand, 4983120 - 4982960
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| ||||| ||| |||||||  ||||||||||||||||| | |||||||| |||| || |||||||||| |||||||| ||||||||||||    
T  4983120 ttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcatccttgtaattgctaatcctcgcaatttagccttgcaattattaatcatttaa 4983021  T
Q  194 aatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4983020 aatttcgtccctctccccacttaatcactgccacgccacatgaaattccaaatttacccct 4982960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 91 - 254
Target Start/End: Complemental strand, 33247670 - 33247507
Alignment:
Q  91 ggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatt 190  Q
    |||||||||||||| ||||| ||| ||||||| | |||||||||||| | | |||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  33247670 ggtttaatgatgtgattagtccttgcaattagggatcgtttaaaaatccgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatt 33247571  T
Q  191 taaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  33247570 taaaatttcatccctctccccacttaatcactgccacgccacatgaaattacaaatttacccct 33247507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 117 - 254
Target Start/End: Original strand, 22566825 - 22566962
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactta 216  Q
    |||||| | |||||||||||||| |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  22566825 aattagggatcgtttaaaaattcgttcctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcatccctctccccactta 22566924  T
Q  217 atcagtgccacgccacatgaaattccaaatttacccct 254  Q
    |||| |||||||||||||||||||||||||||||||||    
T  22566925 atcactgccacgccacatgaaattccaaatttacccct 22566962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 42738390 - 42738267
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42738390 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 42738291  T
Q  229 ccacatgaaattccaaatttaccc 252  Q
    ||||||||||||||||||||||||    
T  42738290 ccacatgaaattccaaatttaccc 42738267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 88 - 254
Target Start/End: Complemental strand, 9145166 - 9145000
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||| ||| ||||||| ||||  ||| |||||||  | | ||||||||| | | |||||||||| |||| |||||| |||| |  ||||||||||||||    
T  9145166 aaaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaatgcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatc 9145067  T
Q  188 atttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9145066 atttaaaatttcgtccctctccccacttaatcactgccacgccacatgaaattccaaatttacccct 9145000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 129 - 254
Target Start/End: Original strand, 32950180 - 32950305
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||| | || ||||||| |||| |||||| |||| |  ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  32950180 tttaaaaattcgtcccagtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtctctctccccacttaatcactgccacg 32950279  T
Q  229 ccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||    
T  32950280 ccacatgaaattccaaatttacccct 32950305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 34837433 - 34837308
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||| |  ||||||||| |||| |||||| |||| |  |||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  34837433 tttaaaaattcgtctctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 34837334  T
Q  229 ccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||    
T  34837333 ccacatgaaattccaaatttacccct 34837308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 129 - 254
Target Start/End: Original strand, 38012208 - 38012333
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||||| |||||||||||||| ||||||||||||||||| |||||||    
T  38012208 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttcgtctctctccccacttaatcactgccacg 38012307  T
Q  229 ccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||    
T  38012308 ccacatgaaattccaaatttacccct 38012333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 24711136 - 24711274
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| | |||| ||||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||    
T  24711136 caattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccgttgcattgtttaatcatttaaaatttcgtccctctccccactt 24711235  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| | ||||||||||||||||||||| |||||||||    
T  24711236 aatcactaccacgccacatgaaattccaattttacccct 24711274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 112 - 254
Target Start/End: Complemental strand, 43155903 - 43155761
Alignment:
Q  112 cttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctcccc 211  Q
    |||| |||||| |||||||||||||||  | |||||||| |||||| ||||||||||| |  |||| |  ||||||||||||||||||||||||||||||    
T  43155903 cttataattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttatccctgcattatttaatcatttaaaatttcgtccctctcccc 43155804  T
Q  212 acttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||    
T  43155803 acttaatcactgccacgccacataaaattccaattttacccct 43155761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 44967441 - 44967303
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    |||||||||||||||||||||||  | |||||||| | |||| ||||||||||| |  |||| |  ||||||||||||||||||||||||||||||||||    
T  44967441 caattagaggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccactt 44967342  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| |||||| |||||||||||||||| |||||||||    
T  44967341 aatcactgccacaccacatgaaattccaattttacccct 44967303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 254
Target Start/End: Original strand, 18831370 - 18831512
Alignment:
Q  112 cttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctcccc 211  Q
    ||||||||||| |||||||||||||||  | |||||||| | |||| |||| |||||| | ||||| |  ||||||||||||||||||||| ||||||||    
T  18831370 cttacaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttcgtctctctcccc 18831469  T
Q  212 acttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||    
T  18831470 acttaatcactgccacgccacataaaattccaattttacccct 18831512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 23613334 - 23613472
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | | |||||| | ||||  |||||||||| |  |||| |  ||||||||||||||||||||||||||||||||||    
T  23613334 caattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccactt 23613433  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  23613434 aatcactgccacgccacatgaaattccaaatttacccct 23613472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 124 - 254
Target Start/End: Complemental strand, 36009208 - 36009078
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtg 223  Q
    |||||||||||||||  | |||||||| |||||| |||| |||||| |  |||| |  ||||||||||||||||||||||||||||||||||||||| ||    
T  36009208 ggtcgtttaaaaattggtccctgtaatcgttaatcctggaaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactg 36009109  T
Q  224 ccacgccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||| |||||||||    
T  36009108 ccacgccacatgaaattccaattttacccct 36009078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 49879579 - 49879441
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| ||||||||||||| | ||  ||||||| | |||| ||| ||||||| | ||||| |  ||||||||||||||||||||||||||||||||||    
T  49879579 caattaggggtcgtttaaaaactgatctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccactt 49879480  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  49879479 aatcactgccacgccacatgaaattccaattttacccct 49879441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 116 - 252
Target Start/End: Complemental strand, 50419040 - 50418904
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | ||| |||| | |||| |||||||| || | ||||| |  ||||||||||||||||||||||||||||||||||    
T  50419040 caattaggggtcgtttaaaaattggtccctctaatcgctaatcctggcaatctacccttgcattgtttaatcatttaaaatttcgtccctctccccactt 50418941  T
Q  216 aatcagtgccacgccacatgaaattccaaatttaccc 252  Q
    ||||| || |||||||||||||||||||| |||||||    
T  50418940 aatcactgtcacgccacatgaaattccaattttaccc 50418904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 13058062 - 13058200
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  |  ||||||| | |||| |||| |||||| |  |||| |  ||||||||||||||||||||||||||||||||||    
T  13058062 caattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggtaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccactt 13058161  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| ||||||||||||||||||| ||| |||||||||    
T  13058162 aatcactgccacgccacatgaaatttcaattttacccct 13058200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 112 - 254
Target Start/End: Original strand, 16005859 - 16006001
Alignment:
Q  112 cttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctcccc 211  Q
    |||| |||||| ||||||||||||||| || |||||||| | |||||||||||||||| |  || | |  |||||||||||||||||||||||||||||     
T  16005859 cttataattaggggtcgtttaaaaattaatccctgtaatcgctaattctggcaatttatccatgtattgtttaatcatttaaaatttcgtccctctccct 16005958  T
Q  212 acttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||||||| || ||| ||| |||||||||||| |||||||||    
T  16005959 acttaatcactgtcacaccatatgaaattccaattttacccct 16006001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 37248261 - 37248399
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| | |||| ||||||||||| | ||||| |  ||||||||||||||||||||| ||||||||||||    
T  37248261 caattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcgctctccccactt 37248360  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| ||||  |||||||||||||| || |||||||||    
T  37248361 aatcactgccgagccacatgaaattctaattttacccct 37248399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 5368972 - 5369111
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| | |||||||||||||  | | |||||| | |||| ||||||||||| |  |||| |  ||||||||||||||||| ||||||||||||||||    
T  5368972 caattagggatcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaattttgtccctctccccactt 5369071  T
Q  216 aatcagtgccacgccacatgaaattccaaatttaccccta 255  Q
    ||||| ||||||||||||||||||||||| ||||| ||||    
T  5369072 aatcactgccacgccacatgaaattccaattttactccta 5369111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 7451859 - 7451997
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| |||||| ||||||||||| |  |||| |  |||||||||||||||||||||||||||||         
T  7451859 caattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctcccgtggc 7451958  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  7451959 aatcactgccacgccacatgaaattccaattttacccct 7451997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 37976556 - 37976446
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| ||||||||||||||| || |||||||| | |||||||| ||||||| ||||||| |  ||||||||||||||||||||| ||||||||||||    
T  37976556 caattaggggtcgtttaaaaattgatccctgtaatcgctaattctgacaatttatcattgcattgtttaatcatttaaaatttcgtcactctccccactt 37976457  T
Q  216 aatcagtgcca 226  Q
    ||||| |||||    
T  37976456 aatcactgcca 37976446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 9400522 - 9400631
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| ||||| ||| |||||||  ||| ||||||||||| | |||||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  9400522 ttaatgatgtgattagtccttgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 9400621  T
Q  194 aatttcgtcc 203  Q
    ||||| ||||    
T  9400622 aatttggtcc 9400631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 34765783 - 34765671
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  ||| |||||| | |||| ||||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||    
T  34765783 caattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacctttgcattgtttaatcatttaaaatttcgtccctctccccactt 34765684  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  34765683 aatcactgccacg 34765671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 4982729 - 4982838
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| ||||| ||| |||||||| ||  ||||||||||| | | |||||||| ||||  |||||||||||| |||||||||||||||||||||    
T  4982729 ttaatgatgtgattagtccttgcaattagacgtaatttaaaaattcgtccatgtaattgctaatcttggcaatttagccttgcaattgttaatcatttaa 4982828  T
Q  194 aatttcgtcc 203  Q
    ||||| ||||    
T  4982829 aatttggtcc 4982838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 35508643 - 35508533
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| ||||||||||||||| || | |||||| |||||||||  ||||||| | ||||| |  ||||||||||||||||||||  ||||||||||||    
T  35508643 caattaggggtcgtttaaaaattaatccttgtaatcgttaattctaacaatttacccttgcattgtttaatcatttaaaatttcgtatctctccccactt 35508544  T
Q  216 aatcagtgcca 226  Q
    ||||| |||||    
T  35508543 aatcactgcca 35508533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 24349699 - 24349811
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||| | | |||| || ||||  |||| |||||||  ||||||||||||||||||||||||||||||| ||    
T  24349699 caattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtccctctccccagtt 24349798  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  24349799 aatcactgccacg 24349811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 53701837 - 53701949
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| ||||||||||||||| ||  |||||||   |||| ||| ||||||| | ||||| |  |||||||||||||||||| |||||||||||||||    
T  53701837 caattaggggtcgtttaaaaattgatctctgtaatctctaatcctgacaatttatccttgcattgtttaatcatttaaaatttcttccctctccccactt 53701936  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  53701937 aatcactgccacg 53701949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 54087097 - 54086994
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactta 216  Q
    |||||| |||||||||||||||  | |||||||| ||||||  || ||||||| | ||||| |  ||||||||||||||||||||| |||||||||||||    
T  54087097 aattaggggtcgtttaaaaattggtccctgtaatcgttaatcatgacaatttacccttgcattgtttaatcatttaaaatttcgtctctctccccactta 54086998  T
Q  217 atca 220  Q
    ||||    
T  54086997 atca 54086994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 228
Target Start/End: Original strand, 16605605 - 16605739
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||  ||| ||||||||||  | |||||||| || ||  ||| ||||||| | ||||| |  ||||||||||||    
T  16605605 ttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgtcaaacctgccaatttacccttgcattgattaatcatttaa 16605704  T
Q  194 aatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||||| ||||||||||||| |||||||    
T  16605705 aatttcgtccctccccccacttaatcactgccacg 16605739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 33247299 - 33247377
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaa 194  Q
    |||||||  ||| ||||||||||| | |||||||||| |||| ||||||||||||| ||||||||||||||||||||||    
T  33247299 caattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaa 33247377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 51692578 - 51692711
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||||||||||||||||||| ||   |||||| | |||| ||| ||||||| | ||||| |  ||||||| ||||||||||||||||||||||||||    
T  51692578 caattagaggtcgtttaaaaattgatctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcacttaaaatttcgtccctctccccactt 51692677  T
Q  216 aatcagtgccacgccacatgaaattccaaatttaccc 252  Q
     |||| || ||    |||||||||||||| |||||||    
T  51692678 gatcactgtca---tacatgaaattccaattttaccc 51692711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 220
Target Start/End: Complemental strand, 54435500 - 54435396
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    |||||||  |||||||||||||| || | |||||| || ||| || |||| ||||||||||| ||| |||| |||||||||||||||||||| ||| |||    
T  54435500 caattaggtgtcgtttaaaaattgatccatgtaatcgtcaatccttgcaaattagcattgcatttgataattatttaaaatttcgtccctcttccccctt 54435401  T
Q  216 aatca 220  Q
    |||||    
T  54435400 aatca 54435396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 14801827 - 14801873
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  14801827 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 14801873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 42738069 - 42738143
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||||||| | ||||||||||||||| |||||| |||| | ||||||||||||||| |||||||||| ||||    
T  42738069 tttaaaaattcgtccctgtaattgttaatcctggcattttaaccttgcaattgttaatcgtttaaaatttggtcc 42738143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 52909278 - 52909388
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| ||||||| |||||||  |  ||||||| | |||| ||| ||||||| | ||||| |  |||||||||||||||||||||| |||||||||||    
T  52909278 caattaggggtcgttcaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccatctccccactt 52909377  T
Q  216 aatcagtgcca 226  Q
    ||||| |||||    
T  52909378 aatcactgcca 52909388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 225
Target Start/End: Complemental strand, 15508075 - 15507967
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | | |||||| | |||| ||| ||||||| |||||||    ||||||||||||||||||||| ||||||||||||    
T  15508075 caattaggggtcgtttaaaaattg-tccttgtaatcgctaatcctgacaatttaccattgcatggtttaatcatttaaaatttcgtctctctccccactt 15507977  T
Q  216 aatcagtgcc 225  Q
    ||||| ||||    
T  15507976 aatcactgcc 15507967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 27069338 - 27069225
Alignment:
Q  89 aaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatca 188  Q
    |||| ||||||||||| || || ||| |||||||  ||| ||||||||||  | |||||||||| |||| ||||||||||| | ||||| |  |||||||    
T  27069338 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatca 27069239  T
Q  189 tttaaaatttcgtc 202  Q
    ||||||||||||||    
T  27069238 tttaaaatttcgtc 27069225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 41583634 - 41583522
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||| |||||||||| ||| ||||| | | |||| ||||||| ||  |  |||||  ||||||||||||||||||||||||||| | |||||    
T  41583634 caattaggggtcatttaaaaattgatttctgtattcgctaatcctggcaaattgcccctgcaaaagttaatcatttaaaatttcgtccctcttctcactt 41583535  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  41583534 aatcactgccacg 41583522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 49879232 - 49879319
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||| |||||||||||||||  | |||||||||| |||| || ||||  |||| |||||||  ||||||||||||||||||||||    
T  49879232 caattaggggtcgtttaaaaattggtccctgtaattgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 49879319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 50418693 - 50418780
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||| |||||||||||||||  | |||||||| |||||| || ||||  |||| |||||||  ||||||||||||||||||||||    
T  50418693 caattaggggtcgtttaaaaattggtccctgtaatcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 50418780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 54858989 - 54858874
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||| ||||||||||| || || ||| |||||||  ||| ||||||||||  | | |||||| |||||| ||||||||||| | ||||| |  ||||||    
T  54858989 aaaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatc 54858890  T
Q  188 atttaaaatttcgtcc 203  Q
    ||||||||||||||||    
T  54858889 atttaaaatttcgtcc 54858874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 204
Target Start/End: Original strand, 6236830 - 6236943
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||| ||||||  ||||| ||| |||||||| ||| ||||||| || | || |||||| |||||| | || |||||| | |||||||||||||||||    
T  6236830 aggtttattgatgtctttagtccttgcaattagacgtcatttaaaattt-agtcttgtaatcgttaatcccgggaatttacccttgcaattgttaatcat 6236928  T
Q  190 ttaaaatttcgtccc 204  Q
    ||||||||| |||||    
T  6236929 ttaaaatttggtccc 6236943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 9144804 - 9144878
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  ||||||||||||||||||||||||| ||||    
T  9144804 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttggtcc 9144878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 35028335 - 35028289
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||    
T  35028335 ttaatcatttaaaatttcgtcactctccccacttaatcactgccacg 35028289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 52298117 - 52298163
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||    
T  52298117 ttaatcatttaaaatttcgtctctctccccacttaatcactgccacg 52298163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 10781887 - 10781786
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | | |||| | | |||| || ||||  |||| |||||||  ||||||||||||||||||||||||||||||| ||    
T  10781887 caattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtccctctccccagtt 10781788  T
Q  216 aa 217  Q
    ||    
T  10781787 aa 10781786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 203
Target Start/End: Original strand, 22717934 - 22718051
Alignment:
Q  86 ttaaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaa 185  Q
    ||||||||||||||||||| || || |||||||||||| ||| ||||||||||  | | |||||| | |||| ||| |||| || | ||||  |  ||||    
T  22717934 ttaaaggtttaatgatgtgtttcgtccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgctttgtttaa 22718033  T
Q  186 tcatttaaaatttcgtcc 203  Q
    ||||||||||||||||||    
T  22718034 tcatttaaaatttcgtcc 22718051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 202
Target Start/End: Original strand, 11523948 - 11524060
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||||||||||| || || ||| |||||||  ||| ||||||||||  |  ||||||| |||||| |||||||| || | ||||| |  ||||||||    
T  11523948 aggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgttaatcctggcaatatacccttgcattgtttaatcat 11524047  T
Q  190 ttaaaatttcgtc 202  Q
    |||||||||||||    
T  11524048 ttaaaatttcgtc 11524060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 17356317 - 17356221
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    |||||||||||||||  | |||||| | | ||||  ||||||||||   ||||| |  || ||||||||||||||||||||||||||||||||||||    
T  17356317 ggtcgtttaaaaattggtccctgtattcgctaatcttggcaatttactcttgcattgtttgatcatttaaaatttcgtccctctccccacttaatca 17356221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 198
Target Start/End: Complemental strand, 45463508 - 45463392
Alignment:
Q  82 tttattaaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattg 181  Q
    |||||||| ||||||||||| || || || ||| |||||||  ||| ||||||||||  | |||||||||| |||| |||||||| || | ||||| |      
T  45463508 tttattaatggtttaatgatatgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatctacccttgcattgt 45463409  T
Q  182 ttaatcatttaaaattt 198  Q
    |||||||||||||||||    
T  45463408 ttaatcatttaaaattt 45463392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 228
Target Start/End: Original strand, 54858557 - 54858697
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||| ||||||||||| || || ||| |||||||  ||| ||||||||||  | |||||||| | |||| ||| ||||||| | ||||| |  ||||||    
T  54858557 aaaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatc 54858656  T
Q  188 atttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    |||||||||||||||| |   || ||||||||| |||||||    
T  54858657 atttaaaatttcgtcctttgaccaacttaatcactgccacg 54858697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 55867517 - 55867405
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | | |||||| |||||| || ||||  || | ||||| |  |||||||||||||||||||||||| | |||| ||    
T  55867517 caattaggggtcgtttaaaaattggtccatgtaatcgttaatccttgcaaactacccttgcattgtttaatcatttaaaatttcgtccctattcccagtt 55867418  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  55867417 aatcactgccacg 55867405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 6237248 - 6237141
Alignment:
Q  91 ggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatt 190  Q
    |||||| ||||||  |||||||||||||||||  ||| ||||||| ||  |  ||||||||| |||| |||  |||||| | || |||||||||||||||    
T  6237248 ggtttattgatgtctttagttcttacaattaggcgtcatttaaaatttagtctctgtaattgctaatcctgagaatttacccttacaattgttaatcatt 6237149  T
Q  191 taaaattt 198  Q
    ||||||||    
T  6237148 taaaattt 6237141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 167
Target Start/End: Complemental strand, 22567190 - 22567107
Alignment:
Q  84 tattaaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatt 167  Q
    ||||||||| ||||||||||| ||||| ||| |||||||  ||| ||||||||||| | |||||||||| |||| || ||||||    
T  22567190 tattaaaggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatt 22567107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 34837071 - 34837186
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||| ||| ||||||| ||||  ||| |||||||  | | ||||||||||| | |||||||||| |||| |||||| |||| |  ||||||||||||||    
T  34837071 aaaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatc 34837170  T
Q  188 atttaaaatttcgtcc 203  Q
     |||||||||| ||||    
T  34837171 gtttaaaatttggtcc 34837186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 53129901 - 53129798
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtg 223  Q
    ||||||||||||||| || |  ||||| | |||| || |||||||| | | ||| |  || ||| |||||||||||||||||||||||||||||||| ||    
T  53129901 ggtcgtttaaaaattgatcctcgtaatcgctaatccttgcaatttaccctcgcattgtttcatcgtttaaaatttcgtccctctccccacttaatcactg 53129802  T
Q  224 ccac 227  Q
    ||||    
T  53129801 ccac 53129798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 203
Target Start/End: Complemental strand, 27149423 - 27149310
Alignment:
Q  89 aaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatca 188  Q
    |||| ||||||||||| || || ||| |||||||  ||| ||||||| ||  | |||||||||| |||| ||||||||||| | ||||| |  |||||||    
T  27149423 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaa-ttagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatca 27149325  T
Q  189 tttaaaatttcgtcc 203  Q
    |||||||||||||||    
T  27149324 tttaaaatttcgtcc 27149310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 32950501 - 32950427
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||||| |||||||||| ||||    
T  32950501 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttggtcc 32950427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 202
Target Start/End: Original strand, 35028023 - 35028109
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtc 202  Q
    ||||||| |||||||||||||||  |||||||| | | |||| || ||||  |||| |||||||  |||||||||||||||||||||    
T  35028023 caattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtc 35028109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 38012529 - 38012455
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||||| |||||||||| ||||    
T  38012529 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttggtcc 38012455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 48529913 - 48529867
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||||||||| ||||||||| ||||||||||| |||||||    
T  48529913 ttaatcatttaaaattttgtccctctctccacttaatcactgccacg 48529867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 51203647 - 51203721
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||||| |||||||||| ||||    
T  51203647 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttggtcc 51203721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 3032580 - 3032693
Alignment:
Q  89 aaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatca 188  Q
    |||| ||||||||||| || || ||| |||||||  ||| ||||||||||  | | |||||| | |||| ||||||||||| | ||||| |  |||||||    
T  3032580 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatca 3032679  T
Q  189 tttaaaatttcgtc 202  Q
    ||||||||||||||    
T  3032680 tttaaaatttcgtc 3032693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 10407892 - 10408001
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||  ||| ||||||||||  | |||||||| | |||| ||| ||||||| | ||||| |  ||||||||||||    
T  10407892 ttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattactccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 10407991  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  10407992 aatttcgtcc 10408001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 10408312 - 10408203
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    |||||| |||| || || ||| |||||||  ||| ||||||||||  | |||||||| | |||| ||||||||||| | ||||| |  ||||||||||||    
T  10408312 ttaatgttgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 10408213  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  10408212 aatttcgtcc 10408203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 11446295 - 11446384
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccct 205  Q
    |||||||||||| ||||||||||  ||| || ||| |||||| ||||||| ||| | ||||||   |||||| |||||||||||||||||    
T  11446295 caattagaggtcatttaaaaattggttcatggaatcgttaatcctggcaaattacccttgcaaagtttaatcttttaaaatttcgtccct 11446384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 203
Target Start/End: Complemental strand, 22987282 - 22987165
Alignment:
Q  86 ttaaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaa 185  Q
    ||||||| ||||||||||| || || |||||||||||| ||| ||||||||||  | | |||||| | |||| ||| |||| || | ||||  |  ||||    
T  22987282 ttaaaggcttaatgatgtgtttcgtccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgctttgtttaa 22987183  T
Q  186 tcatttaaaatttcgtcc 203  Q
    ||||||||||||||||||    
T  22987182 tcatttaaaatttcgtcc 22987165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 27891587 - 27891696
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| ||||||||  |  ||||||||||  | |||||||| | ||||| |||||||||| | ||||| |  ||||||||||||    
T  27891587 ttaatgatgtgtttcgtccttgcaattagacattatttaaaaattagtccctgtaatcgctaattttggcaatttacccttgcattgtttaatcatttaa 27891686  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  27891687 aatttcgtcc 27891696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 32063739 - 32063650
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccct 205  Q
    ||||||| |||| ||||||||||  || ||||||| |||||| ||||||| ||| | ||||||   |||||||||||||||| |||||||    
T  32063739 caattaggggtcatttaaaaattggtttctgtaatcgttaatactggcaaattacccttgcaaagtttaatcatttaaaattccgtccct 32063650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 220
Target Start/End: Original strand, 24411383 - 24411487
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| ||| |||||||||||  | |||||||| | |||  ||| ||||||| | ||||| |  |||||||||||||  ||||||||||| |||||||    
T  24411383 caattaggggtagtttaaaaattggtccctgtaatcgctaaccctgacaatttacccttgcattgtttaatcatttaaagattcgtccctcttcccactt 24411482  T
Q  216 aatca 220  Q
    |||||    
T  24411483 aatca 24411487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 30642541 - 30642437
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtg 223  Q
    |||| |||||||||||||   |||||| |||||| || |||| ||||  ||||||   ||||||||||||||||||||||||   |||||||||| | ||    
T  30642541 ggtcatttaaaaattcatcattgtaatcgttaatcctagcaaattagtcttgcaaagtttaatcatttaaaatttcgtcccttgacccacttaatgactg 30642442  T
Q  224 ccacg 228  Q
    |||||    
T  30642441 ccacg 30642437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 45463076 - 45463184
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||  ||| ||||||||||  |  ||||||| | |||| ||||||||||| | ||||| |  ||||||||||||    
T  45463076 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 45463175  T
Q  194 aatttcgtc 202  Q
    |||||||||    
T  45463176 aatttcgtc 45463184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 46661317 - 46661205
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||| ||  |||| || ||||  |||| |||||||  |||||||||||||||||||||| |   || ||||    
T  46661317 caattaggggtcgtttaaaaattggtccctgtatttactaatcctcgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaactt 46661218  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  46661217 aatcactgccacg 46661205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 50750912 - 50751024
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    |||||||  ||||||||||||||| | |||||||| | |||| ||||||| ||| | ||||| |  |||||||||||||| |||||| ||   |||||||    
T  50750912 caattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaaaaattcgtcactgaacccactt 50751011  T
Q  216 aatcagtgccacg 228  Q
    ||| | |||||||    
T  50751012 aatgactgccacg 50751024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 228
Target Start/End: Original strand, 27068948 - 27069047
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||  | |||||||| | |||| ||||||||||| | ||||| |  |||||||||||||||||||||| |   || ||||||||| |||||||    
T  27068948 tttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 27069047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 39539313 - 39539234
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    |||||||||||||||  |   |||||| ||||||||| |||| ||||| ||||| |  ||||||||||||||||||||||    
T  39539313 ggtcgtttaaaaattggtcaatgtaatcgttaattcttgcaaattagccttgcattctttaatcatttaaaatttcgtcc 39539234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 202
Target Start/End: Complemental strand, 39701347 - 39701224
Alignment:
Q  79 ctatttattaaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaa 178  Q
    |||| ||||| ||||||||||||||| || || ||| |||||||  ||| ||||||||||  |   |||||| ||||||  || ||||||| | |||||     
T  39701347 ctatatattataggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctatgtaatcgttaatcttgacaatttacctttgcat 39701248  T
Q  179 ttgttaatcatttaaaatttcgtc 202  Q
    |  |||||||||||||||||||||    
T  39701247 tgtttaatcatttaaaatttcgtc 39701224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 40387557 - 40387604
Alignment:
Q  181 gttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||||||||||||| ||||| | |||||||||| |||||||    
T  40387557 gttaatcatttaaaatttcgttcctcttctcacttaatcactgccacg 40387604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 51692922 - 51692835
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||| |||||||||||||||  | |||||| | | |||| || ||||  |||| |||||||  ||||||||||||||||||||||    
T  51692922 caattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 51692835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 227
Target Start/End: Complemental strand, 11448131 - 11448021
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactta 216  Q
    |||||| ||||||||||||||| ||  ||||||| | |||| || |||| ||| | ||||| |  ||||||||||||||||||||| || |  ||| |||    
T  11448131 aattaggggtcgtttaaaaattgatctctgtaatcgctaatccttgcaaattacccttgcattgtttaatcatttaaaatttcgtcactatttccagtta 11448032  T
Q  217 atcagtgccac 227  Q
    |||| ||||||    
T  11448031 atcactgccac 11448021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 22718312 - 22718254
Alignment:
Q  144 ctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtc 202  Q
    |||||||||||||| |||||||||||   ||||| |  |||||||||||||||||||||    
T  22718312 ctgtaattgttaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 22718254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 22986904 - 22986962
Alignment:
Q  144 ctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtc 202  Q
    |||||||||||||| |||||||||||   ||||| |  |||||||||||||||||||||    
T  22986904 ctgtaattgttaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtc 22986962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 202
Target Start/End: Complemental strand, 24711483 - 24711397
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtc 202  Q
    ||||||| |||||||||||||||  | | ||| || |||||| || ||||  |||| |||||||  |||||||||||||||||||||    
T  24711483 caattaggggtcgtttaaaaattggtccatgtcatcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtc 24711397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 48528563 - 48528601
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  48528563 ttaatcatttaaaatttcgttcctatccccacttaatca 48528601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 39667200 - 39667091
Alignment:
Q  93 tttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcattta 192  Q
    |||||||||||| || || |||  |||||  |||| ||||||||||  | |||||||| |||||| |||| || ||| | ||||| |  |||||||||||    
T  39667200 tttaatgatgtgtttcgtccttgtaattacgggtcatttaaaaattggtccctgtaatcgttaatcctggtaaattacccttgcattgtttaatcattta 39667101  T
Q  193 aaatttcgtc 202  Q
    ||||||||||    
T  39667100 aaatttcgtc 39667091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 50504248 - 50504139
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || |||  ||||||  ||| ||||||||||  |  ||||||| |||||| | ||||||||| | ||||| |  ||||||||||||    
T  50504248 ttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcgttaatccaggcaatttacccttgcattgtttaatcatttaa 50504149  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  50504148 aatttcgtcc 50504139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 199
Target Start/End: Complemental strand, 5818201 - 5818093
Alignment:
Q  91 ggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatt 190  Q
    |||||||||||||| || ||  ||  ||||||  ||| ||||||||||  | |||||||| |||||| ||| ||||||| | ||||| |  |||||||||    
T  5818201 ggtttaatgatgtgtttcgtctttgtaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctgtcaatttacccttgcattgtttaatcatt 5818102  T
Q  191 taaaatttc 199  Q
    |||||||||    
T  5818101 taaaatttc 5818093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 220
Target Start/End: Original strand, 8438306 - 8438409
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||| ||||||||||  | | |||||| |||||| ||||||| |||   ||||||   ||||||||||||||||||||||||   |||||||    
T  8438306 caattaggggtcatttaaaaattggt-catgtaatcgttaatcctggcaaattactcttgcaaaccttaatcatttaaaatttcgtcccttgacccactt 8438404  T
Q  216 aatca 220  Q
    |||||    
T  8438405 aatca 8438409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 8439615 - 8439523
Alignment:
Q  128 gtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    ||||||||||| ||   |||||| |||||| || |||| ||| | ||||||   ||||||||||||||||||||||||   ||||||||||||    
T  8439615 gtttaaaaattgatcattgtaatcgttaatcctagcaaattatccttgcaaacattaatcatttaaaatttcgtcccttgacccacttaatca 8439523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 41582480 - 41582584
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtg 223  Q
    |||| ||||||||||  | ||| |||| |||||| ||||||| ||  |  |||||  ||||||||||||||||||||||||||  | || ||||||| ||    
T  41582480 ggtcatttaaaaattggtccctctaatcgttaatcctggcaaattgcccctgcaaaagttaatcatttaaaatttcgtccctcatcacagttaatcattg 41582579  T
Q  224 ccacg 228  Q
    |||||    
T  41582580 ccacg 41582584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 3e-57; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 94 - 254
Target Start/End: Complemental strand, 32680989 - 32680829
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| ||||| ||| |||||||  ||||||||||||||| | | |||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  32680989 ttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccatgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 32680890  T
Q  194 aatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32680889 aatttcgtccctctccccacttaatcactgccacgccacatgaaattccaaatttacccct 32680829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 85 - 254
Target Start/End: Complemental strand, 30948563 - 30948394
Alignment:
Q  85 attaaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgtta 184  Q
    |||||||| ||| ||||||| ||||  ||| |||||||  | | ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||    
T  30948563 attaaaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgtta 30948464  T
Q  185 atcatttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30948463 atcatttaaaatttcgtccctctccccacttaatcactgccacgccacatgaaattccaaatttacccct 30948394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 34929009 - 34928884
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  34929009 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 34928910  T
Q  229 ccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||    
T  34928909 ccacatgaaattccaaatttacccct 34928884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 39686893 - 39686768
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  39686893 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 39686794  T
Q  229 ccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||    
T  39686793 ccacatgaaattccaaatttacccct 39686768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 117 - 254
Target Start/End: Original strand, 19204515 - 19204652
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactta 216  Q
    |||||| |||||||||||||||  | |||||||| |||||||||||||||||| | ||||| |  ||||||||||||||||| |||||||||||||||||    
T  19204515 aattaggggtcgtttaaaaattggtccctgtaatcgttaattctggcaatttacccttgcattgtttaatcatttaaaattttgtccctctccccactta 19204614  T
Q  217 atcagtgccacgccacatgaaattccaaatttacccct 254  Q
    |||| ||||||||||||||||||||||| |||| ||||    
T  19204615 atcattgccacgccacatgaaattccaattttatccct 19204652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 17102045 - 17102183
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| | |||| ||||||||||| |  |||| |  ||||||||||||||||||||||||||||||||||    
T  17102045 caattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccactt 17102144  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  17102145 aatcactgccacgccacatgaaattccaattttacccct 17102183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 27991764 - 27991902
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| ||||||||| ||||| || |||||||| | |||| ||||||||||| |  |||| |  ||||||||||||||||||||||||||||||||||    
T  27991764 caattaggggtcgtttagaaattgatccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccactt 27991863  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  27991864 aatcactgccacgccacatgaaattccaattttacccct 27991902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 6253496 - 6253634
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| | |||| ||||||||||| |  |||| |  ||||||||||||||||||||||||||| ||||||    
T  6253496 caattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctctccactt 6253595  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  6253596 aatcaatgccacgccacatgaaattccaattttacccct 6253634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 6571038 - 6571176
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| |||||| ||| ||||||| | ||||| |  ||||||||||||||||| ||||||||||||||||    
T  6571038 caattaggggtcgtttaaaaattggtccctgtaatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaattttgtccctctccccactt 6571137  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| || |||||||||||||||||||| |||||||||    
T  6571138 aatcactgtcacgccacatgaaattccaattttacccct 6571176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 32299108 - 32298970
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    |||||||  ||||||||||||||  | |||||||| | |||| ||||||||||| | ||||| |  ||||||||| ||||||||||||||||||||||||    
T  32299108 caattaggagtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattgaaaatttcgtccctctccccactt 32299009  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| ||||||||||||||||||||||| | |||||||    
T  32299008 aatcactgccacgccacatgaaattccaattctacccct 32298970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 94 - 228
Target Start/End: Original strand, 32680598 - 32680732
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| ||||| ||| |||||||  ||| ||||||||||| |||||||||||| |||| ||| ||||||||| |||||||||||||||||||||    
T  32680598 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgttcctgtaattgctaatcctgacaatttagccttgcaattgttaatcatttaa 32680697  T
Q  194 aatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||| |||| |   || ||||||||| |||||||    
T  32680698 aatttggtccttggaccaacttaatcactgccacg 32680732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 252
Target Start/End: Complemental strand, 22871680 - 22871544
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||| ||||||||||  | |||||||| | |||| || |||||||| | ||||| |  |||||||||||||||||| |||||||||||||||    
T  22871680 caattaggggtcatttaaaaattggtccctgtaatagctaatccttgcaatttacccttgcattgtttaatcatttaaaatttcttccctctccccactt 22871581  T
Q  216 aatcagtgccacgccacatgaaattccaaatttaccc 252  Q
    ||||| ||||| ||||||| ||||||||| |||||||    
T  22871580 aatcactgccatgccacataaaattccaattttaccc 22871544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 220
Target Start/End: Complemental strand, 28469411 - 28469307
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| |||||| ||||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||    
T  28469411 caattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccactt 28469312  T
Q  216 aatca 220  Q
    |||||    
T  28469311 aatca 28469307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 116 - 220
Target Start/End: Complemental strand, 32053546 - 32053442
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| | |||||||||||||  ||||| |||| |||||| || |||||||| ||||||| |  ||||||||||||||||||||||||||||||||||    
T  32053546 caattagggatcgtttaaaaattggttcctataatcgttaatcctagcaatttatcattgcattgtttaatcatttaaaatttcgtccctctccccactt 32053447  T
Q  216 aatca 220  Q
    |||||    
T  32053446 aatca 32053442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 10935819 - 10935929
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| | |||| ||||||||||| | ||||| |  ||||||||||||||||||||||||||| ||||||    
T  10935819 caattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctctccactt 10935918  T
Q  216 aatcagtgcca 226  Q
    ||||| |||||    
T  10935919 aatcactgcca 10935929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 27396998 - 27396886
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| | |||| ||| ||||| | || |||| |  ||||||||||||||||||||||||||||||||||    
T  27396998 caattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaattcaccactgcattgtttaatcatttaaaatttcgtccctctccccactt 27396899  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  27396898 aatcactgccacg 27396886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 42731444 - 42731554
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | | |||||| | |||| ||||||||||| |  |||| |  ||||||||||||||||||||||||||||||||||    
T  42731444 caattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccactt 42731543  T
Q  216 aatcagtgcca 226  Q
    ||||| |||||    
T  42731544 aatcactgcca 42731554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 2640585 - 2640477
Alignment:
Q  112 cttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctcccc 211  Q
    |||| |||||| |||||||||||||||     ||||||| | |||||||||||||||| | ||||| |  ||||||||||||||||||||| ||||||||    
T  2640585 cttataattaggggtcgtttaaaaattggcctctgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtctctctcccc 2640486  T
Q  212 acttaatca 220  Q
    |||||||||    
T  2640485 acttaatca 2640477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 45011007 - 45010895
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  ||| |||| | | |||| || |||||||| | ||||| |  ||||||||||||||||||||| ||||||||||||    
T  45011007 caattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaatttacccttgcattgtttaatcatttaaaatttcgtctctctccccactt 45010908  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  45010907 aatcactgccacg 45010895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 48789180 - 48789102
Alignment:
Q  142 tcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    ||||||||| |||||||||||||||||| | ||||| |  |||||||||||||||||| ||||||||||||||| ||||    
T  48789180 tcctgtaatcgttaattctggcaatttacccttgcattgtttaatcatttaaaatttcatccctctccccacttgatca 48789102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 203
Target Start/End: Complemental strand, 42618338 - 42618225
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||||||||||| || || ||| |||||||  ||| ||||||||||  |||||||||| | |||| ||||||||||| | ||||| |  ||||||||    
T  42618338 aggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 42618239  T
Q  190 ttaaaatttcgtcc 203  Q
    ||||||||||||||    
T  42618238 ttaaaatttcgtcc 42618225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 40379860 - 40379906
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  40379860 ttaatcatttaaaatttcgtccctctccccacttaatcaatgccacg 40379906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 220
Target Start/End: Complemental strand, 23181397 - 23181293
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| ||||||||||| |||  | | |||||| | ||||  |||||||||| | ||||| |  ||||||||||||||||||||||||||| ||||||    
T  23181397 caattaggggtcgtttaaatattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctctccactt 23181298  T
Q  216 aatca 220  Q
    |||||    
T  23181297 aatca 23181293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 203
Target Start/End: Complemental strand, 46205737 - 46205623
Alignment:
Q  89 aaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatca 188  Q
    |||||||||||||||| || |||||| ||||||  | || |||||| |||  |||||||||| |||||| ||| ||| ||| | ||||| |  |||||||    
T  46205737 aaggtttaatgatgtgtttcgttcttgcaattaatgatcatttaaagattggttcctgtaatcgttaatcctgacaaattacccttgcattgtttaatca 46205638  T
Q  189 tttaaaatttcgtcc 203  Q
    |||||||||||||||    
T  46205637 tttaaaatttcgtcc 46205623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 205
Target Start/End: Original strand, 18086298 - 18086403
Alignment:
Q  100 atgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttc 199  Q
    ||||| ||||| ||| |||||||  ||||||||||||||  | |||||||  | |||| || |||| ||||| |||||||| ||||||| ||||||||||    
T  18086298 atgtgtttagtccttgcaattaggagtcgtttaaaaattggtccctgtaaacgataatccttgcaaattagccttgcaattattaatcacttaaaatttc 18086397  T
Q  200 gtccct 205  Q
    ||||||    
T  18086398 gtccct 18086403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 24388910 - 24388955
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccac 227  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  24388910 ttaatcacttaaaatttcgtccctctccccacttaatcactgccac 24388955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 28890577 - 28890690
Alignment:
Q  89 aaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatca 188  Q
    |||||||||||||||| || || ||| |||||||| ||| ||||||||||  | | |||||| | |||| || |||||||| | ||||| |  |||||||    
T  28890577 aaggtttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctagcaatttacccttgcattgtttaatca 28890676  T
Q  189 tttaaaatttcgtc 202  Q
    ||||||||||||||    
T  28890677 tttaaaatttcgtc 28890690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 2640199 - 2640315
Alignment:
Q  112 cttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctcccc 211  Q
    ||||||||||| |||||||||||||||  | |||||| | | |||| || |||| ||||  |||||||  |||||||||||||||||||||| |   ||     
T  2640199 cttacaattaggggtcgtttaaaaattggtacctgtattcgctaatccttgcaaattagtcttgcaatcattaatcatttaaaatttcgtcctttgacca 2640298  T
Q  212 acttaatcagtgccacg 228  Q
    ||||||||| |||||||    
T  2640299 acttaatcactgccacg 2640315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 5457310 - 5457198
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | | |||| | |||||| || |||| ||| | || ||||  |||||||||||||||||||||||||  |||| ||    
T  5457310 caattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaattaccctttcaatgtttaatcatttaaaatttcgtccctcatcccagtt 5457211  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  5457210 aatcactgccacg 5457198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 228
Target Start/End: Complemental strand, 18087757 - 18087629
Alignment:
Q  100 atgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttc 199  Q
    ||||| ||||| ||| ||||||| |||| ||||||||||  |  ||||||| | |||| || ||||  |||| |||||||| |||||||||||||||||     
T  18087757 atgtgtttagtccttgcaattaggggtcatttaaaaattggtcactgtaatcgctaatccttgcaaaatagccttgcaattattaatcatttaaaatttt 18087658  T
Q  200 gtccctctccccacttaatcagtgccacg 228  Q
    ||||||   |||||||||| | |||||||    
T  18087657 gtcccttaacccacttaatgactgccacg 18087629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 201
Target Start/End: Original strand, 32068098 - 32068206
Alignment:
Q  93 tttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcattta 192  Q
    |||||||||||| || || ||| |||||||| ||| ||||||||||  | | |||||| | |||| ||||||||||| | ||||| |  |||||||||||    
T  32068098 tttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 32068197  T
Q  193 aaatttcgt 201  Q
    |||||||||    
T  32068198 aaatttcgt 32068206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 32068519 - 32068411
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||  ||| |||||||||| || |||||||| | |||| ||| ||||||| | ||||| |  ||||||||||||    
T  32068519 ttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattaatccctgtaatcgctaatcctgccaatttacccttgcattgtttaatcatttaa 32068420  T
Q  194 aatttcgtc 202  Q
    |||||||||    
T  32068419 aatttcgtc 32068411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 45010689 - 45010733
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgcca 226  Q
    |||||||||||||||||||||| |||||||||||||||| |||||    
T  45010689 ttaatcatttaaaatttcgtccatctccccacttaatcactgcca 45010733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 18856057 - 18855955
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||| ||||||||||  | |||||||| ||||||  |||||| ||| | ||||||   ||||||||||||||||||||||||   |||||||    
T  18856057 caattaggggtcatttaaaaattggtccctgtaatcgttaatcttggcaaattacccttgcaaagtttaatcatttaaaatttcgtcccttaacccactt 18855958  T
Q  216 aat 218  Q
    |||    
T  18855957 aat 18855955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 30948198 - 30948272
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||||| |||||||||| ||||    
T  30948198 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttggtcc 30948272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 203
Target Start/End: Original strand, 32934338 - 32934460
Alignment:
Q  81 atttattaaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaatt 180  Q
    |||||| ||||||||||||||||| ||  | ||| |||||||  ||| ||||||||||  |  ||||||| | |||| ||| ||||||| | ||||| |     
T  32934338 atttataaaaggtttaatgatgtgtttcatccttgcaattaggtgtcatttaaaaattagtcgctgtaatcgctaatcctgacaatttacccttgcattg 32934437  T
Q  181 gttaatcatttaaaatttcgtcc 203  Q
     ||||||||||||||||||||||    
T  32934438 tttaatcatttaaaatttcgtcc 32934460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 34928688 - 34928762
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||||| |||||||||| ||||    
T  34928688 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttggtcc 34928762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 39686572 - 39686646
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||||| |||||||||| ||||    
T  39686572 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttggtcc 39686646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 42020000 - 42019890
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| ||| |||||||||||  ||||| |||| | ||||  ||||||||||   ||||| |  ||||| ||||||||||||||| |||||| |||||    
T  42020000 caattaggggttgtttaaaaattggttcctataatcgctaatcttggcaatttactcttgcattgtttaattatttaaaatttcgtctctctcctcactt 42019901  T
Q  216 aatcagtgcca 226  Q
    ||||| |||||    
T  42019900 aatcactgcca 42019890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 3914229 - 3914274
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccac 227  Q
    |||||||||||||||||||||||||| || ||||||||| ||||||    
T  3914229 ttaatcatttaaaatttcgtccctcttccaacttaatcactgccac 3914274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 13311370 - 13311325
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccac 227  Q
    ||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  13311370 ttaataatttaaaatttcgtccctctcccgacttaatcactgccac 13311325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 23058432 - 23058541
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| ||||||   ||| ||||||||||  | |||||||||  |||| |||||||| || ||||||| |  ||||||||||||    
T  23058432 ttaatgatgtgtttcgtccttgcaattaagagtcatttaaaaattagtccctgtaattactaatcctggcaatataccattgcattgtttaatcatttaa 23058531  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  23058532 aatttcgtcc 23058541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 23058857 - 23058744
Alignment:
Q  89 aaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatca 188  Q
    |||| ||||||||||| || || ||| ||||| |  ||| |||||||||| || | |||||| |||||| ||||||||||| | | ||| |  |||||||    
T  23058857 aaggcttaatgatgtgtttcgtccttgcaattcggcgtcatttaaaaattaatccttgtaatcgttaatcctggcaatttaccctcgcattgtttaatca 23058758  T
Q  189 tttaaaatttcgtc 202  Q
    ||||||||||||||    
T  23058757 tttaaaatttcgtc 23058744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 43266689 - 43266580
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||  ||| ||||||||||  | | |||||| | |||||||| ||||||| | ||||| |  ||||||||||||    
T  43266689 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaattctgacaatttacccttgcattgtttaatcatttaa 43266590  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  43266589 aatttcgtcc 43266580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 46204420 - 46204533
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||||||||||| || || ||| |||||||  ||| ||||||||||  | |||||||| | |||  ||| ||||||| ||||||| |  || |||||    
T  46204420 aggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaaacctgacaatttaccattgcattattttatcat 46204519  T
Q  190 ttaaaatttcgtcc 203  Q
    ||||||||||||||    
T  46204520 ttaaaatttcgtcc 46204533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 12229475 - 12229363
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    |||||||||||  ||||||| || |||||| ||||||||||| ||| ||| |||   ||||||   ||||||||| ||||||||||||||   |||||||    
T  12229475 caattagaggttatttaaaatttgattcctataattgttaatcctgacaaattattcttgcaaagtttaatcattaaaaatttcgtcccttaacccactt 12229376  T
Q  216 aatcagtgccacg 228  Q
    ||| | |||||||    
T  12229375 aatgactgccacg 12229363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 17886893 - 17886781
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| | || |||||||||| || | |||| | |||||| || ||||  || | |||||| | ||||||||||||||||||||||||   |||||||    
T  17886893 caattagggatcatttaaaaattgatccatgtattcgttaatccttgcaaactacccttgcaaatattaatcatttaaaatttcgtcccttgacccactt 17886794  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  17886793 aatcactgccacg 17886781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 220
Target Start/End: Original strand, 37656949 - 37656981
Alignment:
Q  188 atttaaaatttcgtccctctccccacttaatca 220  Q
    |||||||||||||||||||||||||||||||||    
T  37656949 atttaaaatttcgtccctctccccacttaatca 37656981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 38643641 - 38643677
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaat 218  Q
    |||||||||||| ||||||||||||||||||||||||    
T  38643641 ttaatcatttaagatttcgtccctctccccacttaat 38643677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 6571315 - 6571264
Alignment:
Q  152 gttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||||| ||||  |||| |||||||| ||||||||||||||||||||||    
T  6571315 gttaattcttgcaaactagccttgcaattattaatcatttaaaatttcgtcc 6571264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 228
Target Start/End: Original strand, 25628480 - 25628615
Alignment:
Q  93 tttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcattta 192  Q
    |||||||||||| || || ||| |||||||  ||| ||||||||||  |   |||||| | |||| ||||||||||| | ||||| |  |||||||||||    
T  25628480 tttaatgatgtgtttcgtgcttgcaattaggcgtcatttaaaaattagtcattgtaatcgataatcctggcaatttacccttgcattgtttaatcattta 25628579  T
Q  193 aaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||| |   || ||||||||| |||||||    
T  25628580 aaatttcgtcctttgaccaacttaatcactgccacg 25628615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 228
Target Start/End: Complemental strand, 42731821 - 42731710
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactta 216  Q
    |||||| ||||||||||||||| || ||| ||   | |||| || ||||  |||| |||||||| |||||||||||||||||||||| |   || |||||    
T  42731821 aattaggggtcgtttaaaaattgatccctatatccgctaatccttgcaagctagctttgcaattattaatcatttaaaatttcgtcctttgaccaactta 42731722  T
Q  217 atcagtgccacg 228  Q
    |||| |||||||    
T  42731721 atcactgccacg 42731710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 7354953 - 7354999
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||||||||| ||||||| ||||||||||| | |||||||    
T  7354953 ttaatcatttaaaatttggtccctccccccacttaattattgccacg 7354999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 12644142 - 12644096
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    |||||||||||||||||||||||||| |||  ||||||| |||||||    
T  12644142 ttaatcatttaaaatttcgtccctcttcccggttaatcactgccacg 12644096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 38644669 - 38644631
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  38644669 ttaatcatttaagatttcatccctctccccacttaatca 38644631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 43124489 - 43124443
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    |||||||||||||||||||||||| | |||| ||||||| |||||||    
T  43124489 ttaatcatttaaaatttcgtccctattcccagttaatcactgccacg 43124443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 45914615 - 45914661
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    |||||||||||||||||||||||||| |||  ||||||| |||||||    
T  45914615 ttaatcatttaaaatttcgtccctcttcccgattaatcactgccacg 45914661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 22081563 - 22081671
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| ||||||   ||| |||||||||| | |||| |||| | |||| ||||||||||| | ||||| |  ||||||||||||    
T  22081563 ttaatgatgtgtttcgtccttgcaattatgcgtcatttaaaaatt-agtcctctaatcgctaatgctggcaatttacccttgcattgtttaatcatttaa 22081661  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  22081662 aatttcgtcc 22081671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 22081947 - 22081874
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtc 202  Q
    ||||||||||  || ||||||| | |||| ||||||||||| | ||||| |  |||||||||||||||||||||    
T  22081947 tttaaaaattagtttctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 22081874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 25453131 - 25453240
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||  ||| ||||||||||  | ||| |||| | |||| ||| ||||||| | ||||| |  ||||||||||||    
T  25453131 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaatttacccttgcattatttaatcatttaa 25453230  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  25453231 aatttcgtcc 25453240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 42617914 - 42618023
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||  ||| ||||||||||  | ||| |||| | |||| ||| ||||||| | ||||| |  ||||||||||||    
T  42617914 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 42618013  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  42618014 aatttcgtcc 42618023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 43266269 - 43266374
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||  ||| ||||||||||  | | |||||| |||||| ||| ||||||| | ||||| |  ||||||||||||    
T  43266269 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatcatttaa 43266368  T
Q  194 aatttc 199  Q
    ||||||    
T  43266369 aatttc 43266374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 48788822 - 48788911
Alignment:
Q  110 ttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttc 199  Q
    ||||| ||||||| |||||||||||||||  | |||||| | | |||| || ||||  |||| |||||||  ||||||||||||||||||    
T  48788822 ttcttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 48788911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 17885653 - 17885765
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||| |   |||| || ||||  |||| |||||||  |||||||||||||||||||||| |   |||| ||    
T  17885653 caattaggggtcgtttaaaaattggtccctgtattctctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacccagtt 17885752  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  17885753 aatcactgccacg 17885765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 27992111 - 27991999
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||| | | |||| || ||||  |||| |||||||  ||||||||||||||||| |||| |   || ||||    
T  27992111 caattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaactt 27992012  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  27992011 aatcactgccacg 27991999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 32687423 - 32687507
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgt 201  Q
    |||||| |||| ||||||| ||  | |||||||| |||||| ||||||| ||  | |||||| | ||||||||||||||||||||    
T  32687423 aattaggggtcatttaaaatttggtccctgtaatcgttaatcctggcaaattgcccttgcaaatattaatcatttaaaatttcgt 32687507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 47945392 - 47945468
Alignment:
Q  126 tcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtc 202  Q
    |||||||||||||  ||| |||| | | |||| || ||||  ||||||||||||  |||||||||||||||||||||    
T  47945392 tcgtttaaaaattggttcatgtattcgctaatccttgcaaactagcattgcaatcattaatcatttaaaatttcgtc 47945468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 47950822 - 47950898
Alignment:
Q  126 tcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtc 202  Q
    |||||||||||||  ||| |||| | | |||| || ||||  ||||||||||||  |||||||||||||||||||||    
T  47950822 tcgtttaaaaattggttcatgtattcgctaatccttgcaaactagcattgcaatcattaatcatttaaaatttcgtc 47950898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 3e-57; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 94 - 254
Target Start/End: Complemental strand, 14197009 - 14196849
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| ||||| ||| |||||||  ||||||||||||||| | |||||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  14197009 ttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 14196910  T
Q  194 aatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14196909 aatttcgcccctctccccacttaatcactgccacgccacatgaaattccaaatttacccct 14196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 28000729 - 28000619
Alignment:
Q  144 ctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattcca 243  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28000729 ctgtaattgctaattctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgccacgccacatgaaattcca 28000630  T
Q  244 aatttacccct 254  Q
    |||||||||||    
T  28000629 aatttacccct 28000619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 89 - 252
Target Start/End: Complemental strand, 25486325 - 25486164
Alignment:
Q  89 aaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatca 188  Q
    |||| |||||||| |||||||| ||| ||| ||   ||||||||||||||| | |||||||||| |||| | ||||||||||| ||||||||||||||||    
T  25486325 aaggcttaatgatatggttagtccttgcaactaagcgtcgtttaaaaattcgtccctgtaattgctaatcccggcaatttagccttgcaattgttaatca 25486226  T
Q  189 tttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttaccc 252  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||    
T  25486225 tttaaaatttcgtcc--ctccccacttaatcactgccacgccacatgaaattccaaatttaccc 25486164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 129 - 255
Target Start/End: Complemental strand, 363189 - 363063
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  363189 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 363090  T
Q  229 ccacatgaaattccaaatttaccccta 255  Q
    |||||||||||||||||||||||||||    
T  363089 ccacatgaaattccaaatttaccccta 363063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 30337474 - 30337612
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| | |||| ||||||||||| | ||||| | |||||||||||||||||||||||||||||||||||    
T  30337474 caattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattggttaatcatttaaaatttcgtccctctccccactt 30337573  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  30337574 aatcactgccacgccacatgaaattccaattttacccct 30337612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 254
Target Start/End: Complemental strand, 17734570 - 17734428
Alignment:
Q  112 cttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctcccc 211  Q
    ||||||||||  ||||||||||||||| || | |||||| | |||| ||  ||||||| | ||||| |  ||||||||||||||||| ||||||||||||    
T  17734570 cttacaattatgggtcgtttaaaaattgatccatgtaatcgctaatcctatcaatttacccttgcattgtttaatcatttaaaattttgtccctctcccc 17734471  T
Q  212 acttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  17734470 acttaatcactgccacgccacatgaaattccaattttacccct 17734428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 14196613 - 14196727
Alignment:
Q  89 aaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatca 188  Q
    |||| ||||||||||| ||||| ||| |||||||  ||| ||||||||||| | |||||||||| |||||||||||||||||| ||||||||||||||||    
T  14196613 aaggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaattctggcaatttagctttgcaattgttaatca 14196712  T
Q  189 tttaaaatttcgtcc 203  Q
    |||||||||| ||||    
T  14196713 tttaaaatttggtcc 14196727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 25485952 - 25486065
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||||||||||| ||||| ||| ||||||   ||| ||||||||||| | |||||||||| |||| ||||||||||||| |||||||||||||||||    
T  25485952 aggtttaatgatgtgattagtccttgcaattaagcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcat 25486051  T
Q  190 ttaaaatttcgtcc 203  Q
    ||||||||| ||||    
T  25486052 ttaaaatttggtcc 25486065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 33517560 - 33517663
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactta 216  Q
    |||||| | |||||||||||||  | |||||||| | |||| ||||||||||| | ||||| |  |||||||||||||||||||||||||||||||||||    
T  33517560 aattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccactta 33517659  T
Q  217 atca 220  Q
    ||||    
T  33517660 atca 33517663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 12080661 - 12080771
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| | ||||  |||||||||| |  |||| |  ||||||||||||||||||||||||||||||||||    
T  12080661 caattaggggtcgtttaaaaattgctccctgtaatcgctaatcatggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccactt 12080760  T
Q  216 aatcagtgcca 226  Q
    ||||| |||||    
T  12080761 aatcactgcca 12080771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 30803895 - 30803996
Alignment:
Q  125 gtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgc 224  Q
    |||||||||||||| ||   |||||| |||||| ||||||||||| | || || |  ||||||||||||||||||||||||||||||||||||||| |||    
T  30803895 gtcgtttaaaaattgatctatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttcgtccctctccccacttaatcactgc 30803994  T
Q  225 ca 226  Q
    ||    
T  30803995 ca 30803996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 21628116 - 21628004
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| ||||| |||||||||  | |||||||| | |||| ||| ||||||| | ||||| |  ||||||||||||||||| ||||||||||||||||    
T  21628116 caattaggggtcgcttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaattttgtccctctccccactt 21628017  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  21628016 aatcactgccacg 21628004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 26463204 - 26463316
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||| | |||||| ||||||| ||| | ||||||   |||||||||||||||||||||||||  |||| ||    
T  26463204 caattaggggtcgtttaaaaattggtccctgtattcgttaatcctggcaaattacccttgcaaagtttaatcatttaaaatttcgtccctcatcccagtt 26463303  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  26463304 aatcactgccacg 26463316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 30725779 - 30725894
Alignment:
Q  110 ttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctcc 209  Q
    ||||| ||||||| |||||||||||||||  |  ||||||| | |||| ||| ||||||| | ||||| |  ||||||||||||||||||||||||||||    
T  30725779 ttcttgcaattag-ggtcgtttaaaaattggtctctgtaatcgctaatcctgccaatttacccttgcactgtttaatcatttaaaatttcgtccctctcc 30725877  T
Q  210 ccacttaatcagtgcca 226  Q
    ||| ||||||| |||||    
T  30725878 ccatttaatcactgcca 30725894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 33646984 - 33647100
Alignment:
Q  112 cttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctcccc 211  Q
    ||||||||||  ||||||||||||| | || |||||||| | ||||  || ||||||| | ||||| |  ||||||||||||||||||||| ||||||||    
T  33646984 cttacaattaagggtcgtttaaaaagtgatccctgtaatcgctaatcttgccaatttacccttgcattatttaatcatttaaaatttcgtctctctcccc 33647083  T
Q  212 acttaatcagtgccacg 228  Q
    | ||||||| |||||||    
T  33647084 atttaatcactgccacg 33647100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 32593484 - 32593601
Alignment:
Q  85 attaaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgtta 184  Q
    |||| ||| ||||||||||| ||||| ||| |||||||  ||| ||||||||||  | ||| |||| | |||| ||| ||||||| | ||||| ||||||    
T  32593484 attataggcttaatgatgtgtttagtcctttcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaatttacccttgcatttgtta 32593583  T
Q  185 atcatttaaaatttcgtc 202  Q
    ||||||||||||||||||    
T  32593584 atcatttaaaatttcgtc 32593601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 203
Target Start/End: Original strand, 21836032 - 21836143
Alignment:
Q  91 ggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatt 190  Q
    |||||||||||||| || |||||| |||||||  ||| |||||||||| | || |||||| | |||| ||||||||||| | ||||| |  |||||||||    
T  21836032 ggtttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaatt-agtcttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 21836130  T
Q  191 taaaatttcgtcc 203  Q
    |||||||||||||    
T  21836131 taaaatttcgtcc 21836143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 30804264 - 30804152
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| ||||||||||||||| || |||||| | | ||||||| ||||  |||| |||||||  |||||||||||||||||||||| |   || ||||    
T  30804264 caattaggggtcgtttaaaaattgatccctgtattcgctaattcttgcaaactagcgttgcaatcattaatcatttaaaatttcgtcctttgaccaactt 30804165  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  30804164 aatcactgccacg 30804152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 362867 - 362982
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||| ||| ||||||| ||||  ||| |||||||  | | ||||||||||| | ||||||||||||||| |||||| |||| |  ||||||||||||||    
T  362867 aaaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcattttaaccctgcaattgttaatc 362966  T
Q  188 atttaaaatttcgtcc 203  Q
     |||||||||| ||||    
T  362967 gtttaaaatttggtcc 362982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 17734221 - 17734308
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||| |||||||||||||||  ||| |||||||| |||| || ||||  |||| |||||||  ||||||||||||||||||||||    
T  17734221 caattaggggtcgtttaaaaattggttcttgtaattgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 17734308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 22367463 - 22367537
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  ||||||||||||||||||||||||| ||||    
T  22367463 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttggtcc 22367537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 3059311 - 3059392
Alignment:
Q  145 tgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgcca 226  Q
    |||||| | |||| || |||||||| | ||||| |  |||||||||||||||||||||||||||| |||||||||| |||||    
T  3059311 tgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcctcacttaatcactgcca 3059392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 13379885 - 13379796
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccct 205  Q
    ||||||| |||||||||||||||  | |||||| | | ||||||| ||||  |||| |||||||  ||||||||||||||||||||||||    
T  13379885 caattaggggtcgtttaaaaattggtccctgtattcgctaattcttgcaaactagccttgcaatcattaatcatttaaaatttcgtccct 13379796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 7905246 - 7905354
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||  ||| ||||||||||  | | |||||| |||||| ||||||||||| | ||||| |  ||||||||||||    
T  7905246 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgttaatcctggcaatttacccttgcattatttaatcatttaa 7905345  T
Q  194 aatttcgtc 202  Q
    |||||||||    
T  7905346 aatttcgtc 7905354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 202
Target Start/End: Original strand, 15913547 - 15913659
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||||||||||| || ||| || |||||||  ||| ||||||||||  |   |||||||| ||||||||| |||||| | ||||| |  ||||||||    
T  15913547 aggtttaatgatgtgtttcgttattgcaattaggcgtcatttaaaaattagtctttgtaattgctaattctggtaatttacccttgcattgtttaatcat 15913646  T
Q  190 ttaaaatttcgtc 202  Q
    |||||||||||||    
T  15913647 ttaaaatttcgtc 15913659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 1215203 - 1215157
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||| |||||||||||||||| |||||||||||||| |||||||    
T  1215203 ttaatcacttaaaatttcgtccctatccccacttaatcactgccacg 1215157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 7905672 - 7905558
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||||||||||||||| || || ||| |||||||  ||| |||| |||||  | ||| |||| | |||||||||||||||| | ||||| |  ||||||    
T  7905672 aaaggtttaatgatgtgtttcgtccttgcaattaggtgtcatttataaatttgtccctataatcgctaattctggcaatttacccttgcattgtttaatc 7905573  T
Q  188 atttaaaatttcgtc 202  Q
    |||| ||||||||||    
T  7905572 atttcaaatttcgtc 7905558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 8089468 - 8089570
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | ||| |||| |||||| || |||| ||| | ||||| |  ||||||||||||||||||||||||   |||||||    
T  8089468 caattaggggtcgtttaaaaattggtccctataatcgttaatccttgcaaattacccttgcattgtttaatcatttaaaatttcgtcccttaacccactt 8089567  T
Q  216 aat 218  Q
    |||    
T  8089568 aat 8089570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 203
Target Start/End: Complemental strand, 31407302 - 31407192
Alignment:
Q  93 tttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcattta 192  Q
    |||||||||||| || || ||| |||||||  ||| ||||||||||  | |||||||| | |||| ||| ||||||| | ||||| |  |||||||||||    
T  31407302 tttaatgatgtgcttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcattta 31407203  T
Q  193 aaatttcgtcc 203  Q
    |||||||||||    
T  31407202 aaatttcgtcc 31407192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 7160803 - 7160916
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||||||||||| || || ||| |||||||  ||| ||||||||||  |  ||||||| | |||| |||||||||||   ||||| |  ||||||||    
T  7160803 aggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttactcttgcattgtttaatcat 7160902  T
Q  190 ttaaaatttcgtcc 203  Q
    ||||||||||||||    
T  7160903 ttaaaatttcgtcc 7160916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 22373047 - 22372978
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaattt 198  Q
    ||||||||||| | |||||||||| |||| |||||| ||||    |||||||||||||||||||||||||    
T  22373047 tttaaaaattcgtccctgtaattgctaatcctggcattttaatcctgcaattgttaatcatttaaaattt 22372978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 22502773 - 22502886
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||||||||||| || || ||| |||||||  ||| ||||||||||  | | |||||| | |||| ||| ||||||| | ||||| |  ||||||||    
T  22502773 aggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 22502872  T
Q  190 ttaaaatttcgtcc 203  Q
    ||||||||||||||    
T  22502873 ttaaaatttcgtcc 22502886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 33517937 - 33517825
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||| | | |||| || ||||  |||| |||||||  |||||||||||||||||||||| |   || ||||    
T  33517937 caattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatcatttaaaatttcgtcctttgaccaactt 33517838  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  33517837 aatcactgccacg 33517825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 11436015 - 11435960
Alignment:
Q  173 ttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    |||||| | ||||||||||||||||||||||||   |||||||||||| |||||||    
T  11436015 ttgcaaatattaatcatttaaaatttcgtcccttgacccacttaatcattgccacg 11435960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 15115364 - 15115451
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||||| |||||||||||||  | ||| |||| |||||| || |||| ||||| ||||||   ||||||||||||||||| ||||    
T  15115364 caattagagatcgtttaaaaattggtccctataatcgttaatccttgcaaattagccttgcaaagtttaatcatttaaaatttagtcc 15115451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 24210557 - 24210660
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactta 216  Q
    |||||| |||| ||||||||||  |  ||||||||||||||  | |||| ||| | ||||||   |||||||||||||||||| ||||||||||| | ||    
T  24210557 aattaggggtcatttaaaaattggtctctgtaattgttaatcatagcaaattacccttgcaaagtttaatcatttaaaatttcatccctctccccgccta 24210656  T
Q  217 atca 220  Q
    ||||    
T  24210657 atca 24210660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 30337821 - 30337734
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||| |||| ||||||||||  | |||||||| | |||| || ||||  |||| |||||||  ||||||||||||||||||||||    
T  30337821 caattaggggtcatttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 30337734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 20652042 - 20651961
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccct 205  Q
    ||||||||||||||| || |||||| |   |||| || ||||   ||| ||||||| |||||||||||||||||||||||||    
T  20652042 ggtcgtttaaaaattgatccctgtattcactaatccttgcaaaccagccttgcaatcgttaatcatttaaaatttcgtccct 20651961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 21836453 - 21836344
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| ||  | ||| |||||||  ||| ||||||||||  ||| |||||| | |||| ||| ||||||| | ||||| |  ||||||||||||    
T  21836453 ttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagttcttgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 21836354  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  21836353 aatttcgtcc 21836344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 28000384 - 28000497
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||| ||||||| ||||  ||| |||||||  | | ||||||||||| | ||| |||||| |||| ||| || |||| |  |||||||||||||| |    
T  28000384 aggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctttaattgctaatcctgtcattttaaccctgcaattgttaatcgt 28000483  T
Q  190 ttaaaatttcgtcc 203  Q
    ||||||||| ||||    
T  28000484 ttaaaatttggtcc 28000497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 31406881 - 31406990
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||| ||||| || || ||| |||||||  ||| ||||||||||  | |||||||| |||||| |||| |||||  | ||||| |  ||||||||||||    
T  31406881 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggtaatttgtccttgcattatttaatcatttaa 31406980  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  31406981 aatttcgtcc 31406990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 11392929 - 11392973
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgcca 226  Q
    |||||||||||||||||||||  |||||| ||||||||| |||||    
T  11392929 ttaatcatttaaaatttcgtctatctcccaacttaatcactgcca 11392973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 30726162 - 30726050
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||| | | |||| || ||||  |||| ||| |||  |||||||||||||||||||||| |   || ||||    
T  30726162 caattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgaaatcattaatcatttaaaatttcgtcctttgaccaactt 30726063  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  30726062 aatcactgccacg 30726050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 3e-54; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 91 - 254
Target Start/End: Complemental strand, 24905563 - 24905401
Alignment:
Q  91 ggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatt 190  Q
    |||||||||||||| ||||| ||| ||||||  | |||||||||||||| | |||||||||| |||| |||||||||||||  |||||||||||||||||    
T  24905563 ggtttaatgatgtgattagtccttgcaattatggatcgtttaaaaattcgt-cctgtaattgctaatcctggcaatttagccctgcaattgttaatcatt 24905465  T
Q  191 taaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24905464 taaaatttcgtccctctccccacttaatcactgccacgccacatgaaattccaaatttacccct 24905401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 118 - 254
Target Start/End: Original strand, 28011390 - 28011526
Alignment:
Q  118 attagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaa 217  Q
    ||||| |||||||||||||||| | |||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28011390 attaggggtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctctccccacttaa 28011489  T
Q  218 tcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||| ||||||||||||||||||| |||||||||||||    
T  28011490 tcactgccacgccacatgaaatttcaaatttacccct 28011526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 33442953 - 33442828
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33442953 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 33442854  T
Q  229 ccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||| ||||    
T  33442853 ccacatgaaattccaaatttatccct 33442828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 91 - 254
Target Start/End: Complemental strand, 31514714 - 31514552
Alignment:
Q  91 ggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatt 190  Q
    |||||| ||||||| ||||  |||||||||||  | | ||||||||||| | |||||||||| |||| |||||| |||| |  ||||||| |||||||||    
T  31514714 ggtttattgatgtgtttagcccttacaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattattaatcatt 31514615  T
Q  191 taaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  31514614 taaaatttcgtccctctccccacttaatcactgccacgcc-catgaaattccaaatttacccct 31514552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 25647909 - 25648047
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| |||||| ||||||||||| |  |||| |  ||||||||||||||||||||||||||||||||||    
T  25647909 caattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattatttaatcatttaaaatttcgtccctctccccactt 25648008  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  25648009 aatcactgccacgccacatgaaattccaattttacccct 25648047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 129 - 254
Target Start/End: Original strand, 52134106 - 52134231
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  || ||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  52134106 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgtaattgttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 52134205  T
Q  229 ccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||    
T  52134206 ccacatgaaattccaaatttacccct 52134231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 142 - 254
Target Start/End: Complemental strand, 4716814 - 4716702
Alignment:
Q  142 tcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattc 241  Q
    ||||| ||||| |||| |||||| |||| |  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  4716814 tcctgaaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtctctctccccacttaatcactgccacgccacatgaaattc 4716715  T
Q  242 caaatttacccct 254  Q
    |||||||||||||    
T  4716714 caaatttacccct 4716702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 110 - 254
Target Start/End: Original strand, 26024442 - 26024586
Alignment:
Q  110 ttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctcc 209  Q
    ||||| ||||||| |||||||||||||||  |  ||||||| | |||| ||||||||||| | ||||| |  |||||||||||||| |||||||||||||    
T  26024442 ttcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaagttcgtccctctcc 26024541  T
Q  210 ccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||    
T  26024542 ccacttaatcactgccacgccacatggaattccaattttacccct 26024586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 124 - 253
Target Start/End: Complemental strand, 183586 - 183457
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtg 223  Q
    |||||||||||||||  | |||||||| | |||| || |||||||| |  |||| |  ||||||||||||||||||||||||||||||||||||||| ||    
T  183586 ggtcgtttaaaaattggtccctgtaatcgctaatcctagcaatttacccctgcattatttaatcatttaaaatttcgtccctctccccacttaatcactg 183487  T
Q  224 ccacgccacatgaaattccaaatttacccc 253  Q
    ||||||||||||||||||||| ||||||||    
T  183486 ccacgccacatgaaattccaattttacccc 183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 254
Target Start/End: Complemental strand, 47999494 - 47999357
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactta 216  Q
    |||||| |||||||||||||||  | |||||||| | ||||  |||||||||| |  |||| |  ||||||||||||||| |||||||||||||||||||    
T  47999494 aattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccctgcattatttaatcatttaaaatatcgtccctctccccactta 47999395  T
Q  217 atcagtgccacgccacatgaaattccaaatttacccct 254  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  47999394 atcactgccacgccacatgaaattccaattttacccct 47999357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 28011768 - 28011653
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||| ||||||||||| ||||| ||| |||||||  ||| ||||||||||| | |||||||||| |||| ||||||||||||| |||||||||||||||    
T  28011768 aaaggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatc 28011669  T
Q  188 atttaaaatttcgtcc 203  Q
    ||||||||||| ||||    
T  28011668 atttaaaatttggtcc 28011653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 6367587 - 6367699
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| | |||| ||||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||    
T  6367587 caattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccactt 6367686  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  6367687 aatcactgccacg 6367699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 94 - 228
Target Start/End: Original strand, 24905170 - 24905304
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| ||||| ||| |||||||  ||| ||||||||||| | |||||||||| |||| || |||||||||| |||||||||||||||||||||    
T  24905170 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatcatttaa 24905269  T
Q  194 aatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||| |||| |   || ||||||||| |||||||    
T  24905270 aatttggtccttggaccaacttaatcactgccacg 24905304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 17662245 - 17662141
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtg 223  Q
    |||||||||||||||  ||||| |||| |||||| ||||||||||| | ||||| |  |||||||||||||||||||||||||| |||||||||||| ||    
T  17662245 ggtcgtttaaaaattggttcctttaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctcttcccacttaatcactg 17662146  T
Q  224 ccacg 228  Q
    |||||    
T  17662145 ccacg 17662141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 23209730 - 23209595
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgtt-aatcatttaaaatttcgtccctctccccact 214  Q
    ||||||| |||||||||||||||  | | |||||| | |||| ||||||||||| | ||||| ||||| ||||||||| |||||||||||||||||||||    
T  23209730 caattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgca-ttgttcaatcatttacaatttcgtccctctccccact 23209632  T
Q  215 taatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    |||||| |||||    |||||||||||||| |||||||||    
T  23209631 taatcactgcca---tacatgaaattccaattttacccct 23209595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 220
Target Start/End: Original strand, 14878996 - 14879100
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  ||| |||||| | ||||  |||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||    
T  14878996 caattaggggtcgtttaaaaattggttcatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccactt 14879095  T
Q  216 aatca 220  Q
    |||||    
T  14879096 aatca 14879100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 19515844 - 19515979
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  |   |||||| ||||||||||| |||||| | ||||| |  ||||| ||||||||||||||||||||||||||||    
T  19515844 caattaggggtcgtttaaaaattggtctttgtaatcgttaattctggaaatttacccttgcattgtttaattatttaaaatttcgtccctctccccactt 19515943  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| |||||    |||||||||||||| |||| ||||    
T  19515944 aatcactgcca---tacatgaaattccaattttatccct 19515979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 40210773 - 40210661
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| || ||||||||||||  |   |||||| | |||||||||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||    
T  40210773 caattaggggccgtttaaaaattggtctttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccactt 40210674  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  40210673 aatcactgccacg 40210661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 116 - 220
Target Start/End: Original strand, 1103484 - 1103590
Alignment:
Q  116 caattagaggtcgtttaaaaat--tcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccac 213  Q
    ||||||||||||||||||||||  |  | |||||||| | |||| ||||||||||| | ||||| |  ||||||||||||||||||||||||||||||||    
T  1103484 caattagaggtcgtttaaaaatattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccac 1103583  T
Q  214 ttaatca 220  Q
    |||||||    
T  1103584 ttaatca 1103590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 31514316 - 31514430
Alignment:
Q  89 aaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatca 188  Q
    |||||||| ||||||| ||||  ||| |||||||  | | ||||||||||| |||||||||||||||||||||||| |||| |  ||||||||||||||     
T  31514316 aaggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgttcctgtaattgttaattctggcattttaaccctgcaattgttaatcg 31514415  T
Q  189 tttaaaatttcgtcc 203  Q
    |||||||||| ||||    
T  31514416 tttaaaatttggtcc 31514430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 13914470 - 13914358
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||||||| |||||||||||  | | |||||| | |||| ||||||||||| | ||| | |  |||||||||||||||||||||||||||||||||     
T  13914470 caattagaggttgtttaaaaattggtccatgtaatcgctaatcctggcaatttacccttgtattgtttaatcatttaaaatttcgtccctctccccacta 13914371  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  13914370 aatcactgccacg 13914358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 254
Target Start/End: Original strand, 40772540 - 40772667
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtg 223  Q
    |||||||||||||||  | |||||||| | |||| ||| |||||||   ||||| |  |||||||||||||||||||||||||||||||||||||||  |    
T  40772540 ggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcaccg 40772639  T
Q  224 ccacgccacatgaaattccaaatttacccct 254  Q
    |||    |||||||||||||| |||||||||    
T  40772640 cca---tacatgaaattccaattttacccct 40772667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 34464852 - 34464742
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| ||| |||||||||||  | | |||||| | ||||  |||||||||| | |||||||  ||||||||||||||||| ||||||||||||||||    
T  34464852 caattaggggttgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcatttaaaattttgtccctctccccactt 34464753  T
Q  216 aatcagtgcca 226  Q
    ||||| |||||    
T  34464752 aatcactgcca 34464742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 244
Target Start/End: Original strand, 10304014 - 10304073
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaa 244  Q
    ||||||||||||||||||||||||||||||||||||||| |||||   |||||||||||||||    
T  10304014 ttaatcatttaaaatttcgtccctctccccacttaatcactgcca---cacatgaaattccaa 10304073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 252
Target Start/End: Complemental strand, 10304192 - 10304125
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttaccc 252  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||   ||||||||||||||| |||||||    
T  10304192 ttaatcatttaaaatttcgtctctctccccacttaatcactgcca---cacatgaaattccaattttaccc 10304125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 24009901 - 24009833
Alignment:
Q  159 ctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccac 227  Q
    ||||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||||||| ||||||    
T  24009901 ctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccac 24009833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 34850468 - 34850356
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||| | | |||| || |||| ||| | ||||||   |||||||||||||||||| |||||||||||||||    
T  34850468 caattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatttaaaatttcatccctctccccactt 34850369  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  34850368 aatcactgccacg 34850356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 220
Target Start/End: Original strand, 35152368 - 35152472
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    |||||||||||||||||||||||  | ||| |||| | |||| ||| ||||||| | || || |  ||||||||||||||||| ||||||||||||||||    
T  35152368 caattagaggtcgtttaaaaattggtccctataatcgctaatactgccaatttacccttacattgtttaatcatttaaaattttgtccctctccccactt 35152467  T
Q  216 aatca 220  Q
    |||||    
T  35152468 aatca 35152472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 37578587 - 37578483
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtg 223  Q
    |||||||||||||||  ||  |||||| | |||| ||||||||||| | || || |  ||||||||||||||||||||| ||||||||||||||||| ||    
T  37578587 ggtcgtttaaaaattggtttttgtaatcgctaatcctggcaatttacccttacattgattaatcatttaaaatttcgtcactctccccacttaatcactg 37578488  T
Q  224 ccacg 228  Q
    |||||    
T  37578487 ccacg 37578483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 42248542 - 42248610
Alignment:
Q  160 tggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    |||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||||||| |||||||    
T  42248542 tggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 42248610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 30711352 - 30711462
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| ||| ||||||||||| ||  || |||| | |||| || |||||||| | ||||| |  ||||||||||||||||||||||||| ||||||||    
T  30711352 caattaggggttgtttaaaaattgatctctataatcgctaatcctagcaatttatccttgcattgtttaatcatttaaaatttcgtccctcgccccactt 30711451  T
Q  216 aatcagtgcca 226  Q
    ||||| |||||    
T  30711452 aatcactgcca 30711462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 220
Target Start/End: Original strand, 41098752 - 41098862
Alignment:
Q  110 ttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctcc 209  Q
    ||||| ||||||| |||||||||||||||  |  ||||||| | |||| ||| ||||||| | ||||| |  ||||||||||||||||| ||||| ||||    
T  41098752 ttcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaattttgtccccctcc 41098851  T
Q  210 ccacttaatca 220  Q
    |||||||||||    
T  41098852 ccacttaatca 41098862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 225
Target Start/End: Complemental strand, 19018032 - 19017923
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    |||||| ||||||||||||||||  | | |||| | | |||| ||||||||||| | ||||| |  ||||||||||||||||| |||||||| |||||||    
T  19018032 caattacaggtcgtttaaaaattggtccatgtattcgctaatcctggcaatttacccttgcattatttaatcatttaaaattttgtccctcttcccactt 19017933  T
Q  216 aatcagtgcc 225  Q
    ||||| ||||    
T  19017932 aatcactgcc 19017923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 218
Target Start/End: Original strand, 46163056 - 46163157
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactta 216  Q
    |||||| |||||||||||||||  | | |||||| | |||| ||| ||||||| | ||||| |  ||||||||||||||||||||| |||||||||||||    
T  46163056 aattaggggtcgtttaaaaattggtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtctctctccccactta 46163155  T
Q  217 at 218  Q
    ||    
T  46163156 at 46163157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 4960565 - 4960677
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  |   |||| | | |||| || |||||||| | ||||| |  |||||||||||||||||||||||||| |||||||    
T  4960565 caattaggggtcgtttaaaaattgctctttgtattcgctaatccttgcaatttacccttgcattgtttaatcatttaaaatttcgtccctcttcccactt 4960664  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  4960665 aatcactgccacg 4960677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 16970872 - 16970828
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgcca 226  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  16970872 ttaatcatttaaaatttcgtccctctccccacttaatcattgcca 16970828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 34849036 - 34849148
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||| ||||||||||  | |||||| | | |||| || |||| ||| | ||||||   |||||||||||||||||||||||||||||| |||    
T  34849036 caattaggggtcttttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatttaaaatttcgtccctctcccctctt 34849135  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  34849136 aatcactgccacg 34849148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 254
Target Start/End: Complemental strand, 36694639 - 36694516
Alignment:
Q  128 gtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccac 227  Q
    |||||||||||  |  ||||||| | |||| ||| ||||||| | ||||| |  ||||||||||||||||||||| ||||||||||||||||| |||||     
T  36694639 gtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtctctctccccacttaatcactgcca- 36694541  T
Q  228 gccacatgaaattccaaatttacccct 254  Q
       |||||||||| ||| |||||||||    
T  36694540 --tacatgaaatttcaattttacccct 36694516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 254
Target Start/End: Complemental strand, 36710740 - 36710617
Alignment:
Q  128 gtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccac 227  Q
    |||||||||||  |  ||||||| | |||| ||| ||||||| | ||||| |  ||||||||||||||||||||| ||||||||||||||||| |||||     
T  36710740 gtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtctctctccccacttaatcactgcca- 36710642  T
Q  228 gccacatgaaattccaaatttacccct 254  Q
       |||||||||| ||| |||||||||    
T  36710641 --tacatgaaatttcaattttacccct 36710617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 40714447 - 40714555
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||  ||| ||||||||||  | |||||||| |||||| ||||||||||| | ||||| |  ||||||||||||    
T  40714447 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaa 40714546  T
Q  194 aatttcgtc 202  Q
    |||||||||    
T  40714547 aatttcgtc 40714555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 48691173 - 48691285
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  |  ||||| | ||||||||| ||||  || | |||||||  || |||||||||||||| ||| ||||||||||||    
T  48691173 caattaggggtcgtttaaaaattggtcgctgtattcgttaattcttgcaaactaaccttgcaatcattgatcatttaaaattttgtcactctccccactt 48691272  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  48691273 aatcactgccacg 48691285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 52134427 - 52134353
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||||||| | ||||||||||||||| |||||| |||| |  |||||||||||||| |||||||||| ||||    
T  52134427 tttaaaaattcgtccctgtaattgttaatcctggcattttaaccctgcaattgttaatcgtttaaaatttggtcc 52134353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 20760928 - 20760819
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || |||||||||||  ||| ||||||||||  |  ||||||| | |||| ||||||||||| | ||||| |  ||||||||||||    
T  20760928 ttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 20760829  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  20760828 aatttcgtcc 20760819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 32558530 - 32558421
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || |||||||||||| ||| ||||||||||  ||||| |||| | |||| |||  |||||| | ||| |||  ||||||||||||    
T  32558530 ttaatgatgtgttttgtccttacaattagacgtcatttaaaaattagttcctataatcgctaatcctgataatttacccttgtaatgtttaatcatttaa 32558431  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  32558430 aatttcgtcc 32558421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 32917351 - 32917396
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccac 227  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||    
T  32917351 ttaatcatttaaaatttcgtctctctccccacttaatcactgccac 32917396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 43758876 - 43758957
Alignment:
Q  145 tgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgcca 226  Q
    |||||| | |||||||| |||||||   ||||| |  ||||||||||||||||||||||||||| ||||||||||| |||||    
T  43758876 tgtaatcgctaattctgacaatttactcttgcattgtttaatcatttaaaatttcgtccctctctccacttaatcactgcca 43758957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 1841550 - 1841594
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgcca 226  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||    
T  1841550 ttaatcatttaaaatttcgtcactctccccacttaatcactgcca 1841594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 17188957 - 17189065
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||  ||| ||||||||||  | |||||||| | |||| ||||||||||| | ||||| |  ||||||||||||    
T  17188957 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattatttaatcatttaa 17189056  T
Q  194 aatttcgtc 202  Q
    |||||||||    
T  17189057 aatttcgtc 17189065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 17691240 - 17691334
Alignment:
Q  112 cttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctc 206  Q
    ||||||| ||| |||||||||||||||  | |||||||| | |||| || |||| ||||  ||||| |  |||||||||||||||||||||||||    
T  17691240 cttacaagtaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaatttcgtccctc 17691334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 21444685 - 21444731
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||| |||||||||||||| |||||||||||||||| |||||||    
T  21444685 ttaatcacttaaaatttcgtccatctccccacttaatcactgccacg 21444731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 22103843 - 22103797
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||| ||||||||||||||||||| ||||||||||| |||||||    
T  22103843 ttaatcacttaaaatttcgtccctctctccacttaatcactgccacg 22103797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 202
Target Start/End: Original strand, 34464474 - 34464560
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtc 202  Q
    ||||||| |||||||||||||||  | | |||||| | ||||  |||||||||| | |||||||  |||||||||||||||||||||    
T  34464474 caattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcatttaaaatttcgtc 34464560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 195
Target Start/End: Complemental strand, 17189274 - 17189173
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||| ||| ||||||||||  | |||||||| | |||| ||||||||||| | ||||| |  ||||||||||||    
T  17189274 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 17189175  T
Q  194 aa 195  Q
    ||    
T  17189174 aa 17189173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 25065967 - 25065922
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccac 227  Q
    |||||||||||| |||||||||||||| ||||||||||| ||||||    
T  25065967 ttaatcatttaagatttcgtccctctctccacttaatcactgccac 25065922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 40714866 - 40714757
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||  ||| ||||||||||  | | |||||| | |||| ||||||||||| | ||||| |  ||||||||||||    
T  40714866 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacctttgcattgtttaatcatttaa 40714767  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  40714766 aatttcgtcc 40714757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 46899086 - 46899175
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccct 205  Q
    ||||||| |||||||||||||||  | | |||| | | ||||||| ||||  |||| |||||||  ||||||||||||||||||||||||    
T  46899086 caattaggggtcgtttaaaaattggtccatgtattcgctaattcttgcaaactagctttgcaatcattaatcatttaaaatttcgtccct 46899175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 49955770 - 49955661
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||  ||| ||||||||||  |   |||||| |||||| ||||||||||| | ||||| |  ||||||||||||    
T  49955770 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaa 49955671  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  49955670 aatttcgtcc 49955661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 183242 - 183358
Alignment:
Q  112 cttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctcccc 211  Q
    ||||||||||| |||||||||||||||  | |||||| | | |||| || ||||  |||| |||||||  ||||||||||||||||| |||| |   ||     
T  183242 cttacaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgacca 183341  T
Q  212 acttaatcagtgccacg 228  Q
    ||||||||| |||||||    
T  183342 acttaatcactgccacg 183358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 28325226 - 28325119
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || |  ||| |||||||  ||| |||||||||| | || |||||| ||||||| |||||||||| | ||||| |  ||||||||||||    
T  28325226 ttaatgatgtgtttcggccttgcaattaggcgtcatttaaaaatt-agtcatgtaatcgttaattatggcaatttacccttgcattgtttaatcatttaa 28325128  T
Q  194 aatttcgtc 202  Q
    |||||||||    
T  28325127 aatttcgtc 28325119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 33442586 - 33442706
Alignment:
Q  83 ttattaaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgt 182  Q
    ||||||| || ||| ||||||| ||||  ||| |||||||  | | ||||||||||| |  ||||||||| |||| |||||| |||| |  |||||||||    
T  33442586 ttattaatggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctggcattttaaccctgcaattgt 33442685  T
Q  183 taatcatttaaaatttcgtcc 203  Q
    ||||| |||||||||| ||||    
T  33442686 taatcgtttaaaatttggtcc 33442706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 4960912 - 4960825
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    |||||||||||||||||||||||  | || ||| | | |||| || ||||  |||| |||||||  ||||||||||||||||||||||    
T  4960912 caattagaggtcgtttaaaaattggtccccgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 4960825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 17661877 - 17661963
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||| |||||||||||||||  | |||||| | | |||| || ||||  ||||||||||||  ||||||||||||||||||||||    
T  17661877 caattaggggtcgtttaaaaattggt-cctgtattcgctaatccttgcaaactagcattgcaatcattaatcatttaaaatttcgtcc 17661963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 26024795 - 26024708
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||| |||||||||||||||  | |||||||| | |||| || ||||  |||  |||||||  ||||||||||||||||||||||    
T  26024795 caattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcc 26024708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 48692416 - 48692313
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactta 216  Q
    |||||||||||||||||||||| ||   |||| | ||||||||| |||| ||||| || |||   ||||||||||||||||| ||| ||   ||||||||    
T  48692416 aattagaggtcgtttaaaaattgatcattgtattcgttaattcttgcaaattagccttacaaacattaatcatttaaaattttgtctcttgacccactta 48692317  T
Q  217 atca 220  Q
    ||||    
T  48692316 atca 48692313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 228
Target Start/End: Original strand, 7371289 - 7371427
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    |||||||||||| || || || ||| |||||||  ||| ||||||||||  || ||||||| | | ||||||| |||||| | ||||| |  ||||| ||    
T  7371289 aggtttaatgatatgtttcgtccttgcaattaggtgtcatttaaaaattagtttctgtaatcgctgattctggtaatttatccttgcattgtttaattat 7371388  T
Q  190 ttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    |||||||||||||| |   || ||||||||| |||||||    
T  7371389 ttaaaatttcgtcctttgaccaacttaatcactgccacg 7371427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 9443663 - 9443701
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  9443663 ttaatcatttaaaatttggtccctccccccacttaatca 9443701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 13245941 - 13245979
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  13245941 ttaatcacttaaaattttgtccctctccccacttaatca 13245979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 25065024 - 25065070
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    |||||||||||| ||||||||||||||| ||||| |||| |||||||    
T  25065024 ttaatcatttaagatttcgtccctctcctcacttgatcactgccacg 25065070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 30326499 - 30326605
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||  ||| ||||||||||  |  ||||||| | ||||||||| |||||| | ||||| |  ||||||||||||    
T  30326499 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaattctggtaatttacccttgcattgtttaatcatttaa 30326598  T
Q  194 aatttcg 200  Q
    |||||||    
T  30326599 aatttcg 30326605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 42267394 - 42267432
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  42267394 ttaatcatttaatatttcgtctctctccccacttaatca 42267432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 228
Target Start/End: Complemental strand, 44523561 - 44523427
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||   || |||||||||| ||  || |||| | ||||  |||||||||| | ||||| |  ||||||||||||    
T  44523561 ttaatgatgtgtttcgtccttgcaattaggcctcatttaaaaattaatatctataatcgctaatcatggcaatttacccttgcattgtttaatcatttaa 44523462  T
Q  194 aatttcgtccctctccccacttaatcagtgccacg 228  Q
    |||||| |||||| |  |||||||||| |||||||    
T  44523461 aatttcatccctcccttcacttaatcactgccacg 44523427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 27999188 - 27999143
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccac 227  Q
    |||||||||| |||||||||| |||| |||||||||||| ||||||    
T  27999188 ttaatcattttaaatttcgtctctcttcccacttaatcactgccac 27999143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 31050953 - 31051062
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||  ||  ||||||||||  |  ||||||| | |||| ||||||||||| | ||||| |  ||||||||||||    
T  31050953 ttaatgatgtgtttcgtccttgcaattaggcgttatttaaaaattagtctctgtaatcgctaatcctggcaatttacctttgcattgtttaatcatttaa 31051052  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  31051053 aatttcgtcc 31051062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 49955350 - 49955459
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||   || ||||||||||  | |||||||| | |||| ||||||||||| | ||||| |  ||||||||||||    
T  49955350 ttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 49955449  T
Q  194 aatttcgtcc 203  Q
    ||||| ||||    
T  49955450 aattttgtcc 49955459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 6367957 - 6367853
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtg 223  Q
    |||||||||||||||  | |||||| | | |||| || ||||  |||| |||||||  |||||||||||||||||||||| |   || ||||||||| ||    
T  6367957 ggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactg 6367858  T
Q  224 ccacg 228  Q
    |||||    
T  6367857 ccacg 6367853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 12906082 - 12905974
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| ||||| ||  || ||||||||||  | | |||||| | |||| ||||||||||| | ||||| |  ||||||||||||    
T  12906082 ttaatgatgtgtttcgtccttgcaatttgacatcatttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 12905983  T
Q  194 aatttcgtc 202  Q
    |||||||||    
T  12905982 aatttcgtc 12905974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 204
Target Start/End: Complemental strand, 17692588 - 17692500
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccc 204  Q
    ||||||| ||||||||||||||   | ||||| || | |||| || |||| ||||| ||||| |  |||||||||||||||||||||||    
T  17692588 caattaggggtcgtttaaaaatcggtccctgttatcgctaatccttgcaaattagctttgcattgtttaatcatttaaaatttcgtccc 17692500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 48779208 - 48779252
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgcca 226  Q
    |||||||||||||||| | | |||||||||||||||||| |||||    
T  48779208 ttaatcatttaaaattcctttcctctccccacttaatcactgcca 48779252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 86 - 254
Target Start/End: Complemental strand, 14900883 - 14900717
Alignment:
Q  86 ttaaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaa 185  Q
    ||||||| ||||||||||| ||||| ||| ||||||| |||||||||||||||  | |||||||||| |||| ||||||||||||| ||| |  ||||||    
T  14900883 ttaaaggcttaatgatgtgattagtccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgta--tgttaa 14900786  T
Q  186 tcatttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14900785 tcatttaaaatttcgtccctctccccacttaatcactgccacgccacatgaaattccaaatttacccct 14900717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 88 - 254
Target Start/End: Complemental strand, 33062450 - 33062284
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||| ||| ||||||| ||||  ||| |||||||  | | ||||||||||| | |||||||||| |||| |||||| |||| |  ||||||||||||||    
T  33062450 aaaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatc 33062351  T
Q  188 atttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33062350 atttataatttcgtccctctccccacttaatcactgccacgccacatgaaattccaaatttacccct 33062284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 88 - 254
Target Start/End: Original strand, 33739700 - 33739866
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||| ||| ||||||| ||||  ||| |||||||  | | ||||||||||| | |||||||||| |||| |||||| |||| |  ||||||||||||||    
T  33739700 aaaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatc 33739799  T
Q  188 atttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  33739800 atttaaaatttcgtccctctccccacttaatcactgccacgccacatgaaattccaaatttatccct 33739866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 1696099 - 1695974
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||| |||||||||||| |||| |||||| |||| |  |||||||||||||| |||||||||||||||||||||||||||||||| || ||||    
T  1696099 tttaaaaattcgttcctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttcgtccctctccccacttaatcactgtcacg 1696000  T
Q  229 ccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||    
T  1695999 ccacatgaaattccaaatttacccct 1695974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 13996032 - 13995907
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  13996032 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 13995933  T
Q  229 ccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||    
T  13995932 ccacatgaaattccaaatttacccct 13995907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 41248918 - 41248795
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  41248918 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 41248819  T
Q  229 ccacatgaaattccaaatttaccc 252  Q
    ||||||||||||||||||||||||    
T  41248818 ccacatgaaattccaaatttaccc 41248795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 117 - 254
Target Start/End: Original strand, 39498336 - 39498473
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactta 216  Q
    |||||| |||||||||||||||  | |||||||| |||||| ||||||||||| |  | || |  |||||||||||||||||||||||||||||||||||    
T  39498336 aattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatcatttaaaatttcgtccctctccccactta 39498435  T
Q  217 atcagtgccacgccacatgaaattccaaatttacccct 254  Q
    |||| ||||||||||||| ||||||||| |||||||||    
T  39498436 atcactgccacgccacataaaattccaattttacccct 39498473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 110 - 254
Target Start/End: Original strand, 16099074 - 16099218
Alignment:
Q  110 ttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctcc 209  Q
    ||||| ||||||| |||| ||||||||||  | ||||||||   |||| ||||||||||| |  |||| |  ||||||||||||||||||||||||||||    
T  16099074 ttcttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctcc 16099173  T
Q  210 ccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||    
T  16099174 ccacttaatcactgccacgccacatgaaattccaattttacccct 16099218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 11163426 - 11163288
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| | |||| ||||||||||| |  |||| |  ||||||||||||||||||||||||||||||||||    
T  11163426 caattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacctctgcattgtttaatcatttaaaatttcgtccctctccccactt 11163327  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| ||||| |||||| |||||||||| |||||||||    
T  11163326 aatcactgccatgccacacgaaattccaattttacccct 11163288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 6657911 - 6658042
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtg 223  Q
    |||||||||||||||  | ||||||||   ||||  |||||||||| |  |||| |  ||||||||||||||||||||||||||||||||||||||| ||    
T  6657911 ggtcgtttaaaaattggtccctgtaatcactaatcatggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactg 6658010  T
Q  224 ccacgccacatgaaattccaaatttaccccta 255  Q
    ||||||||||||||||||||| ||||||||||    
T  6658011 ccacgccacatgaaattccaattttaccccta 6658042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 44714164 - 44714054
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||||| |||| ||||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||    
T  44714164 caattaggggtcgtttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccactt 44714065  T
Q  216 aatcagtgcca 226  Q
    ||||| |||||    
T  44714064 aatcactgcca 44714054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 45556137 - 45556275
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| | |||||||||||||  | |||||||| | |||| ||||||||||| |  |||| |  ||||||||||||||||| ||||||||||| ||||    
T  45556137 caattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttatccctgcattgtttaatcatttaaaattttgtccctctccctactt 45556236  T
Q  216 aatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    ||||| ||||| ||||||||||||||||| |||||||||    
T  45556237 aatcactgccatgccacatgaaattccaattttacccct 45556275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 15848113 - 15848225
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||||| | |||| |||| |||||| | ||||| |  ||||||||||||||||||||||||||||||||||    
T  15848113 caattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccactt 15848212  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  15848213 aatcactgccacg 15848225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 39423548 - 39423650
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtg 223  Q
    |||||||||||||||  |  ||||||| | |||||||||||||||| | ||| | |  ||||||||||||||||||||||||||||||||||||||| ||    
T  39423548 ggtcgtttaaaaattggtctctgtaatcgctaattctggcaatttatccttgtattgtttaatcatttaaaatttcgtccctctccccacttaatcactg 39423647  T
Q  224 cca 226  Q
    |||    
T  39423648 cca 39423650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 37895742 - 37895638
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtg 223  Q
    ||||||||||||| |  |||| ||||| | |||| |||||||||||   ||||| |  ||||||||||||||||||||||||||||||||||||||| ||    
T  37895742 ggtcgtttaaaaaatggttcccgtaatcgctaatcctggcaatttacacttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactg 37895643  T
Q  224 ccacg 228  Q
    |||||    
T  37895642 ccacg 37895638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 228
Target Start/End: Original strand, 2318212 - 2318295
Alignment:
Q  145 tgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    |||||| | |||||||||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||||| | |||||||    
T  2318212 tgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaattaatgccacg 2318295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 36382186 - 36382298
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| | |||||||||||||  | ||| |||| | |||| ||| ||||||| | ||||| |  |||||||||||||||||| |||||||||||||||    
T  36382186 caattagggttcgtttaaaaattggtccctataatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcatccctctccccactt 36382285  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  36382286 aatcactgccacg 36382298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 86 - 203
Target Start/End: Original strand, 1695735 - 1695852
Alignment:
Q  86 ttaaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaa 185  Q
    ||||||| ||| ||||||| ||||  ||| |||||||  | | ||||||||||| | |||||||||| |||| |||||| |||| |  ||||||||||||    
T  1695735 ttaaaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaa 1695834  T
Q  186 tcatttaaaatttcgtcc 203  Q
    ||||||||||||| ||||    
T  1695835 tcatttaaaatttggtcc 1695852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 41248558 - 41248671
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||| ||||||| ||||  ||| |||||||  | | ||||||||||||| |||||||||| |||| |||||| |||| |  |||||||||||||| |    
T  41248558 aggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgt 41248657  T
Q  190 ttaaaatttcgtcc 203  Q
    ||||||||| ||||    
T  41248658 ttaaaatttggtcc 41248671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 220
Target Start/End: Original strand, 10712748 - 10712852
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| | |||||||||||||  | | | ||||  ||||| ||||||||||| | ||||| |  |||||||||||||||||| |||||||||||||||    
T  10712748 caattagggttcgtttaaaaattggtccttataatcattaatcctggcaatttacccttgcattgtttaatcatttaaaatttcatccctctccccactt 10712847  T
Q  216 aatca 220  Q
    |||||    
T  10712848 aatca 10712852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 15604336 - 15604451
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||| ||||||||||| || || ||| |||||||  ||| ||||||||||  | |||||||| | |||| ||||||||||| | ||||| |  ||||||    
T  15604336 aaaggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatc 15604435  T
Q  188 atttaaaatttcgtcc 203  Q
    ||||||||||||||||    
T  15604436 atttaaaatttcgtcc 15604451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 36755119 - 36755222
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactta 216  Q
    ||||||||||||||||||||||  ||| |||||  | |||| ||  ||||||| | || || |  ||||||||||||||||||||| |||||||||||||    
T  36755119 aattagaggtcgtttaaaaattggttcatgtaaccgctaatcctaacaatttacccttacattgtttaatcatttaaaatttcgtctctctccccactta 36755218  T
Q  217 atca 220  Q
    ||||    
T  36755219 atca 36755222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 203
Target Start/End: Complemental strand, 15604767 - 15604653
Alignment:
Q  89 aaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatca 188  Q
    |||||||||||||||| || || ||| |||||||  ||| |||||||| |  | |||||||| | |||| ||||||||||| | ||||| |  |||||||    
T  15604767 aaggtttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaactagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 15604668  T
Q  189 tttaaaatttcgtcc 203  Q
    |||||||||||||||    
T  15604667 tttaaaatttcgtcc 15604653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 36479743 - 36479853
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | | |||||| | ||||  | ||| |||| | ||||| |  |||||||||||||||||||||| |||||||||||    
T  36479743 caattaggggtcgtttaaaaattggtccatgtaatcgctaatcttagcattttacccttgcattgtttaatcatttaaaatttcgtccatctccccactt 36479842  T
Q  216 aatcagtgcca 226  Q
    ||||| |||||    
T  36479843 aatcactgcca 36479853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 218
Target Start/End: Complemental strand, 202758 - 202657
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactta 216  Q
    |||||| |||| ||||||||||| | | |||||| |||||| ||||||| ||||| |||||    ||||||||||||||||||||||||   ||||||||    
T  202758 aattaggggtcatttaaaaattcgtccatgtaatcgttaatcctggcaaattagccttgcagagtttaatcatttaaaatttcgtccctacacccactta 202659  T
Q  217 at 218  Q
    ||    
T  202658 at 202657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 33740093 - 33739988
Alignment:
Q  98 tgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatt 197  Q
    ||||||| ||||  |||||||||||  | | ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||||| |||||||||    
T  33740093 tgatgtgtttagcccttacaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 33739994  T
Q  198 tcgtcc 203  Q
    | ||||    
T  33739993 tggtcc 33739988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 11830367 - 11830475
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||| ||| ||||||||||  | |||||||||| |||| ||  ||||||| | ||||| |  ||||||||||||    
T  11830367 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaattgctaatcctaacaatttacccttgcattgtttaatcatttaa 11830466  T
Q  194 aatttcgtc 202  Q
    |||||||||    
T  11830467 aatttcgtc 11830475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 21370604 - 21370516
Alignment:
Q  117 aattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccct 205  Q
    ||||| |||||||||||||||| || | |||| | |||||| || ||||  ||||||||||||  ||||| ||||||||||||||||||    
T  21370604 aattataggtcgtttaaaaattgatccatgtattcgttaatccttgcaaactagcattgcaatcattaataatttaaaatttcgtccct 21370516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 210
Target Start/End: Complemental strand, 22051402 - 22051302
Alignment:
Q  110 ttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctcc 209  Q
    ||||| ||||||||||| |||||||||||  |  ||||||| | |||| || |||||||| | ||||| |  ||||||||||||||||||||| ||||||    
T  22051402 ttcttgcaattagaggttgtttaaaaattagtctctgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttcgtctctctcc 22051303  T
Q  210 c 210  Q
    |    
T  22051302 c 22051302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 203
Target Start/End: Original strand, 33062046 - 33062162
Alignment:
Q  87 taaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaat 186  Q
    |||||| ||| ||||||| ||||  ||| |||||||  | | ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||||    
T  33062046 taaaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaat 33062145  T
Q  187 catttaaaatttcgtcc 203  Q
    | |||||||||| ||||    
T  33062146 cgtttaaaatttggtcc 33062162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 44045405 - 44045293
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||||||||||||||  | |||||| | | |||| || ||||  |||| |||||||  ||||||||||||||||| |||||||  |||| ||    
T  44045405 caattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaattttgtccctcatcccagtt 44045306  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  44045305 aatcactgccacg 44045293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 201
Target Start/End: Complemental strand, 28226167 - 28226060
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||  ||| ||||||||||  | |||||||| | |||| ||||||||||| | ||||| |  ||||||||||||    
T  28226167 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 28226068  T
Q  194 aatttcgt 201  Q
    ||||||||    
T  28226067 aatttcgt 28226060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 6573046 - 6573175
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||||||||||| || || | | |||||||  ||| ||||||||||  | | |||||| | ||||  |||||||||| | ||||| |  ||||||||    
T  6573046 aggtttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaatttgtccatgtaatcgctaatcttggcaatttacc-ttgcattgtttaatcat 6573144  T
Q  190 ttaaaatttcgtccctctccccacttaatca 220  Q
    |||||| ||||||||||||||| ||||||||    
T  6573145 ttaaaaattcgtccctctccccccttaatca 6573175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 11347514 - 11347560
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||||||||||||| ||||||| | |||||||||||||||    
T  11347514 ttaatcatttaaaatttcgtctctctccctaattaatcagtgccacg 11347560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 11349542 - 11349496
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    |||||||||||||||||||||||||  |||| |||||||||||||||    
T  11349542 ttaatcatttaaaatttcgtccctcaacccagttaatcagtgccacg 11349496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 11689632 - 11689678
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||| |||||||||||||| |||||||||||||||| |||||||    
T  11689632 ttaatcacttaaaatttcgtccatctccccacttaatcactgccacg 11689678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 13995711 - 13995785
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||||| |||||||||| ||||    
T  13995711 tttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatttggtcc 13995785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 17266489 - 17266527
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  17266489 ttaatcatttaaaatttggtccctctccccacttaatca 17266527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 8342186 - 8342299
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||||||||||| || || ||| ||||||   ||| ||||||||||  |   |||||||| |||| ||||||||||| | ||||| |  ||||||||    
T  8342186 aggtttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtctatgtaattggtaatcctggcaatttatccttgcattgtttaatcat 8342285  T
Q  190 ttaaaatttcgtcc 203  Q
    ||||||||||||||    
T  8342286 ttaaaatttcgtcc 8342299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 25230127 - 25230216
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccct 205  Q
    ||||||| |||||||||||||||  | |||||| | | |||| || ||||  |||| ||||||||  |||||||||||||||||||||||    
T  25230127 caattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaattactaatcatttaaaatttcgtccct 25230216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 6846877 - 6846921
Alignment:
Q  184 aatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    |||||||||||||||||||||||| |||||||||| | |||||||    
T  6846877 aatcatttaaaatttcgtccctcttcccacttaattactgccacg 6846921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 10713118 - 10713014
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtg 223  Q
    |||||||||||||||  || ||||| | | |||| || |||| ||||| ||||||| |||||||||||||||| |||||| |   || ||||||||| ||    
T  10713118 ggtcgtttaaaaattggtttctgtattcgctaatccttgcaaattagccttgcaatcgttaatcatttaaaatgtcgtcctttgaccaacttaatcactg 10713019  T
Q  224 ccacg 228  Q
    |||||    
T  10713018 ccacg 10713014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 25892485 - 25892521
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaat 218  Q
    |||||||||||||| ||||||||||||||||||||||    
T  25892485 ttaatcatttaaaaattcgtccctctccccacttaat 25892521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 8710897 - 8710782
Alignment:
Q  88 aaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatc 187  Q
    ||||| ||||||||||| || || ||| |||||||  ||| ||||||||||  | | |||||| | |||| ||| ||||||| | ||||| |  ||||||    
T  8710897 aaaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatc 8710798  T
Q  188 atttaaaatttcgtcc 203  Q
    ||||||||||||||||    
T  8710797 atttaaaatttcgtcc 8710782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 13692623 - 13692536
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||| |||||||||||||||  | |||||| | | |||| || ||||  |||| |||||||  ||||||||||||||||||||||    
T  13692623 caattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 13692536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 36755491 - 36755404
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||| |||||||||||||||  | ||| |||| | |||| || ||||  |||| |||||||  ||||||||||||||||||||||    
T  36755491 caattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 36755404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 203
Target Start/End: Complemental strand, 8342607 - 8342493
Alignment:
Q  89 aaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatca 188  Q
    |||||||||||||||| || || |||||||||||  ||| ||||||||||  |  |||||||   |||| ||| ||||||| | ||||| |  ||||| |    
T  8342607 aaggtttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcaataatcctgacaatttacccttgcattgtttaatta 8342508  T
Q  189 tttaaaatttcgtcc 203  Q
    |||||||||||||||    
T  8342507 tttaaaatttcgtcc 8342493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 10840567 - 10840605
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  10840567 ttaatcatttaaactttcgtccctcttcccacttaatca 10840605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 11721427 - 11721389
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  11721427 ttaatcacttaaaatttcgtctctctccccacttaatca 11721389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 17266667 - 17266629
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  17266667 ttaatcatttaaaatttcgtcattctccccacttaatca 17266629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 25623379 - 25623425
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    |||||||||||||||||||||||||| |||  ||||||| |||||||    
T  25623379 ttaatcatttaaaatttcgtccctctacccggttaatcactgccacg 25623425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 25624442 - 25624397
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccac 227  Q
    |||||||||||||||||||||||||| |||  ||||||| ||||||    
T  25624442 ttaatcatttaaaatttcgtccctctacccggttaatcactgccac 25624397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 36382473 - 36382405
Alignment:
Q  173 ttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaa 244  Q
    ||||||| ||||||||||||||||||||||| |   || ||||||||| |||||   |||||||||||||||    
T  36382473 ttgcaatcgttaatcatttaaaatttcgtcctttggccaacttaatcactgcca---cacatgaaattccaa 36382405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 3653474 - 3653379
Alignment:
Q  124 ggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    |||| ||||||||||  | | |||||| |||||| ||||||| ||| | ||||||   |||||||||||||||||||||||||| || | |||||||    
T  3653474 ggtcatttaaaaattggtccatgtaatcgttaat-ctggcaaattacccttgcaaagtttaatcatttaaaatttcgtccctcttccaagttaatca 3653379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 6658250 - 6658138
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    |||||||||||||||||||||||  | |||||| | | |||| || ||||  |||| || ||||  ||||||||||||||||| |||| |   || ||||    
T  6658250 caattagaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttacaatcattaatcatttaaaatttagtcctttgaccaactt 6658151  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  6658150 aatcactgccacg 6658138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 6848071 - 6848035
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaat 218  Q
    |||||||||||||||||||||| || |||||||||||    
T  6848071 ttaatcatttaaaatttcgtccatcaccccacttaat 6848035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 94 - 254
Target Start/End: Complemental strand, 21363 - 21203
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| ||||| ||| |||||||||||||||||||||||| | |||||||||| ||||  |||||||||||  |||||||||||||||||||||    
T  21363 ttaatgatgtgattagtccttgcaattagaggtcgtttaaaaattcgtccctgtaattgctaatcatggcaatttagtcttgcaattgttaatcatttaa 21264  T
Q  194 aatttcgtccctctccccacttaatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  21263 aattccgtccctctccccacttaatcactgccacgccacatgaaatttcaattttacccct 21203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 198
Target Start/End: Original strand, 21005 - 21116
Alignment:
Q  87 taaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaat 186  Q
    |||||| ||||||||||| ||||| ||| |||||||  ||| ||||||||||| | |||||||||| |||| || |||||||||| ||||||||||||||    
T  21005 taaaggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaat 21104  T
Q  187 catttaaaattt 198  Q
    ||||||||||||    
T  21105 catttaaaattt 21116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 141953 - 141828
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||||| |||||||||| |||| |||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  141953 tttaaaaattcatccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 141854  T
Q  229 ccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||    
T  141853 ccacatgaaattccaaatttacccct 141828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 141593 - 141706
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||| ||||||| ||||  ||| |||||||| | | ||||||||||| | |||||||||| |||| |||||| |||| |  |||||||||||||| |    
T  141593 aggtttattgatgtgtttagcccttgcaattagacggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgt 141692  T
Q  190 ttaaaatttcgtcc 203  Q
    ||||||||| ||||    
T  141693 ttaaaatttagtcc 141706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0559 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 129 - 254
Target Start/End: Original strand, 1271 - 1396
Alignment:
Q  129 tttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||| | |||||||||| |||| ||| || |||| |  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1271 tttaaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 1370  T
Q  229 ccacatgaaattccaaatttacccct 254  Q
    ||||||||||||||||||||||||||    
T  1371 ccacatgaaattccaaatttacccct 1396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0559; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 1590 - 1527
Alignment:
Q  132 aaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaa 195  Q
    |||||||| ||||||||||||||||| |||||| |||| |  |||||||||||||| |||||||    
T  1590 aaaaattcgttcctgtaattgttaatcctggcattttaaccctgcaattgttaatcgtttaaaa 1527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 139697 - 139835
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattg-ttaatcatttaaaatttcgtccctctccccact 214  Q
    ||||||| |||||||||||||||  | |||||||| | |||| ||||||||||| |  || ||||| |||||||||||||||||||||||||||||||||    
T  139697 caattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccatg-aattgattaatcatttaaaatttcgtccctctccccact 139795  T
Q  215 taatcagtgccacgccacatgaaattccaaatttacccct 254  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  139796 taatcactgccacgccacatgaaattccaattttacccct 139835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 1794 - 1933
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| ||||||| |||||||  | |||||||| | ||||  |||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||    
T  1794 caattaggggtcgttaaaaaattggtccctgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccactt 1893  T
Q  216 aatcagtgccacgccacatgaaattccaaatttaccccta 255  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  1894 aatcactgccacgccacatgaaattccaattttaccccta 1933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 68990 - 69102
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    ||||||| |||| ||||||||||  | ||||||||   |||| ||||||||||| | ||||| |  ||||||||||||||||||||||||||||||||||    
T  68990 caattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccactt 69089  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  69090 aatcactgccacg 69102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 69368 - 69256
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccactt 215  Q
    |||||||| ||||||||||||||  | |||||| | | |||| || ||||  |||| |||||||  |||||||||||||||||||||| |   || ||||    
T  69368 caattagatgtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttaaccaactt 69269  T
Q  216 aatcagtgccacg 228  Q
    ||||| |||||||    
T  69268 aatcactgccacg 69256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 201
Target Start/End: Complemental strand, 12666 - 12555
Alignment:
Q  90 aggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcat 189  Q
    ||||||||||||||| || || ||| |||||||  ||| ||||||||||  | |||||||| |||||| ||||||||||| | ||||| |  ||||||||    
T  12666 aggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcat 12567  T
Q  190 ttaaaatttcgt 201  Q
    ||||||||||||    
T  12566 ttaaaatttcgt 12555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 37900 - 37854
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccacg 228  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  37900 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 37854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 2396 - 2505
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||| ||| |||||||||| || |||||||| | |||| || |||||||| | ||||| |  ||||||||||||    
T  2396 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaa 2495  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  2496 aatttcgtcc 2505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 203
Target Start/End: Original strand, 221791 - 221902
Alignment:
Q  91 ggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatt 190  Q
    |||||||||||||| || |||||| |||||||  ||| |||||||||| | || |||||| | |||| ||||||||||| | ||||| |  |||||||||    
T  221791 ggtttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaatt-agtcttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 221889  T
Q  191 taaaatttcgtcc 203  Q
    |||||||||||||    
T  221890 taaaatttcgtcc 221902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 222212 - 222103
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||||  ||| ||||||||||  | | |||||| | |||| ||| ||||||| | ||||| |  ||||||||||||    
T  222212 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtacatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 222113  T
Q  194 aatttcgtcc 203  Q
    ||||||||||    
T  222112 aatttcgtcc 222103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 203
Target Start/End: Original strand, 4985 - 5074
Alignment:
Q  114 tacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||||| ||||||||||||||| || ||| || | | |||| || ||||  |||| |||||||| ||||||||||||||||||||||    
T  4985 tacaattaggggtcgtttaaaaattgatccctatattcgctaatccttgcaaactagccttgcaattattaatcatttaaaatttcgtcc 5074  T

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Target: scaffold0347 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 14602 - 14557
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgccac 227  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||    
T  14602 ttaatcatttaagatttcgtccctctccccacttaatcactgccac 14557  T

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Target: scaffold0347; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 13700 - 13738
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatca 220  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  13700 ttaatcatttaagatttcgtccctctccccacttaatca 13738  T

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Target: scaffold0295 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 2234 - 2278
Alignment:
Q  182 ttaatcatttaaaatttcgtccctctccccacttaatcagtgcca 226  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||    
T  2234 ttaatcatttaaaattttgtccctctccccacttaatcactgcca 2278  T

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Target: scaffold0328 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 202
Target Start/End: Complemental strand, 11573 - 11455
Alignment:
Q  84 tattaaaggtttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgtt 183  Q
    ||||| ||| ||||||||||| ||  | ||| |||||||  ||| ||||||||||  | | |||||| |||||| ||||||||||| | ||||| |  ||    
T  11573 tattataggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgttt 11474  T
Q  184 aatcatttaaaatttcgtc 202  Q
    |||||||||||||||||||    
T  11473 aatcatttaaaatttcgtc 11455  T

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Target: scaffold0042 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 228
Target Start/End: Complemental strand, 12203 - 12069
Alignment:
Q  94 ttaatgatgtggttagttcttacaattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaa 193  Q
    ||||||||||| || || ||| |||||| | ||| |||||||||| || || ||||| | |||| || |||||||| | ||||| |  ||||||||||||    
T  12203 ttaatgatgtgtttcgtccttgcaattaaacgtcatttaaaaattaatcccagtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaa 12104  T
Q  194 aatttcgtccctctccccacttaatcagtgccacg 228  Q
    |||||||||| |   || ||||||||| |||||||    
T  12103 aatttcgtcctttgaccaacttaatcactgccacg 12069  T

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Target: scaffold0008 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 227
Target Start/End: Complemental strand, 239951 - 239843
Alignment:
Q  119 ttagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtccctctccccacttaat 218  Q
    |||| |||| ||||||||||  |||||||||| | |||| ||||||| ||| | || |||   ||||||||||||||||||||||||   ||||||||||    
T  239951 ttaggggtcatttaaaaattggttcctgtaatcgataatcctggcaaattacccttccaaagtttaatcatttaaaatttcgtccctacacccacttaat 239852  T
Q  219 cagtgccac 227  Q
     | ||||||    
T  239851 tactgccac 239843  T

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Target: scaffold0707 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 6482 - 6395
Alignment:
Q  116 caattagaggtcgtttaaaaattcattcctgtaattgttaattctggcaatttagcattgcaattgttaatcatttaaaatttcgtcc 203  Q
    ||||||| |||||||||||||||  | |||||| | | |||| || ||||  |||| |||||||  ||||||||||||||||||||||    
T  6482 caattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatcatttaaaatttcgtcc 6395  T

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