View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14234_low_8 (Length: 504)
Name: NF14234_low_8
Description: NF14234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14234_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 481; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 481; E-Value: 0
Query Start/End: Original strand, 1 - 489
Target Start/End: Complemental strand, 4269245 - 4268757
Alignment:
| Q |
1 |
gaggaagccaccaaagattatgcaaagagagaaaaatgttccataacaatgtatgaaagtacggtgtagtaaagtaatatattacaataatgttccacaa |
100 |
Q |
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| T |
4269245 |
gaggaagccaccaaagattatgcaaagagagaaaaatgttccataacaatgtatgaaagtacggtgtagtaaagtaatatattacaataatgttccacaa |
4269146 |
T |
|
| Q |
101 |
gtagaacatttggtgaaattgaaaacaacccatatgattttaatcccaaagtggtaacaaaaaatcatcaggaaaagtagcatataattcaattccttca |
200 |
Q |
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| T |
4269145 |
gtagaacatttggtgaaattgaaaacaacccatatgattttaatcccaaagtggtaacaaaaaatcatcagaaaaagtagcatagaattcaattccttca |
4269046 |
T |
|
| Q |
201 |
aacccaattaacggagaaggatgatgataaacccaagtactatcaactgagtcatcttcatcttcttcattaattttaggaagttcaacaatttgactaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4269045 |
aacccaattaacggagaaggatgatgataaacccaagtactatcaactgagtcatcttcatcttcttcattaattttaggaagttcaacaatttgactaa |
4268946 |
T |
|
| Q |
301 |
gttcttcaacagattcagattcagaacaacttgtcacgtgcatgacagggtcatcaaagtcaaccatagcagctgcagcggttgctgcggcttgaatgtc |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4268945 |
gttcttcaacagattcagattcagaacaacttgtcacgtgcatgacagggtcatcaaagtcaaccatagcagctgcagcggttgctgcggcttgaatgtc |
4268846 |
T |
|
| Q |
401 |
acgtggtgctgatgttgctggtcttggaagcatgtttgataaatgaggaaaattgagaattgcggtttttcctttgatggttaaagctg |
489 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4268845 |
acgtggtgctgatgttgctggtcttggaagcatgtttgataaatgaggaaaattgagaattgcggtttttcctttgatggttaaagctg |
4268757 |
T |
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