View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14235_low_11 (Length: 242)
Name: NF14235_low_11
Description: NF14235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14235_low_11 |
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Alignment Details
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 45092737 - 45092965
Alignment:
| Q |
1 |
aaaatcaacgaaactacccataaaagaagaagcagccattgttgaagcttgatgatcaagaaaaccaagttcacaaggaaggtcaaaagggttcatgggt |
100 |
Q |
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| T |
45092737 |
aaaatcaacgaaactacccataaaagaagaagcagccattgttgaagcttgatgatcaagaaaaccaagttcacaaggaaggtcaaaagggttaatgggt |
45092836 |
T |
|
| Q |
101 |
ttgtgattttgaggaggaagaaagtactgaagatggttggaattggatggtgttggttcaggatgaagaagggtgttgaaaacggaggaagaaggtgaac |
200 |
Q |
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| T |
45092837 |
ttgtgattttgaggaggaagaaagtactgaagatggttggaattggatggtgttggttcaggatgaagaagggtgttgaaaacggaggaagaaggtgaac |
45092936 |
T |
|
| Q |
201 |
atgaagaagaaacggaatcgttgatggtg |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
45092937 |
atgaagaagaaacggaatcgttgatggtg |
45092965 |
T |
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