View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14235_low_7 (Length: 382)
Name: NF14235_low_7
Description: NF14235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14235_low_7 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 111 - 382
Target Start/End: Original strand, 33038744 - 33039015
Alignment:
| Q |
111 |
gtagcaaggtggagaaagaaaggacacatcacctatatattatatgcttctcaaatcttagcaaattttctatagctctttgtccagttaaaaataattt |
210 |
Q |
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| T |
33038744 |
gtagcaaggtggagaaagaaaggacacatcacctatatattatatgcttctcaaatcttagcaaattttctatagctctttgtccagttaaaaataattt |
33038843 |
T |
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| Q |
211 |
caaaggctaagggctatacctactaatttggccattgagacctaagcacatgtacaaagtagattagtgattttcttaactagatcatagagtactatga |
310 |
Q |
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| T |
33038844 |
caaaggctaagggctatacctactaatttggccattgagacctaagcacatgtacaaagtagattagtgattttcttaactagatcatagagtactatga |
33038943 |
T |
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| Q |
311 |
aataaatattaaaatgcataagaaataaacaatagttcaatacattgggacaatactttttctatggaaact |
382 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33038944 |
aataaatattaaaatgcataagaaataaacaatagttcaatacattgggacaatactttttctatggaaact |
33039015 |
T |
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