View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14236_high_6 (Length: 766)

Name: NF14236_high_6
Description: NF14236
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14236_high_6
NF14236_high_6
[»] chr2 (41 HSPs)
chr2 (16-751)||(5700058-5700780)
chr2 (250-388)||(39284760-39284896)
chr2 (245-372)||(34139923-34140048)
chr2 (245-388)||(38312115-38312256)
chr2 (258-424)||(33162615-33162778)
chr2 (245-375)||(42362240-42362368)
chr2 (250-375)||(723901-724024)
chr2 (245-388)||(2334570-2334710)
chr2 (245-375)||(11151743-11151871)
chr2 (245-375)||(11690389-11690517)
chr2 (250-388)||(36318166-36318302)
chr2 (245-394)||(36773418-36773578)
chr2 (245-388)||(5723407-5723547)
chr2 (250-388)||(17057526-17057662)
chr2 (250-388)||(17085509-17085645)
chr2 (258-388)||(36988241-36988368)
chr2 (245-322)||(7815425-7815502)
chr2 (250-375)||(14633983-14634106)
chr2 (245-388)||(4503285-4503425)
chr2 (245-388)||(29867744-29867885)
chr2 (245-388)||(45099630-45099770)
chr2 (253-424)||(13121594-13121777)
chr2 (258-420)||(11067135-11067308)
chr2 (18-107)||(19261716-19261803)
chr2 (245-388)||(36205816-36205956)
chr2 (250-372)||(12123741-12123862)
chr2 (288-394)||(12632908-12633016)
chr2 (251-312)||(17450540-17450601)
chr2 (270-375)||(14202584-14202687)
chr2 (260-321)||(24885602-24885662)
chr2 (251-318)||(11049493-11049560)
chr2 (36-90)||(13266913-13266969)
chr2 (250-318)||(35447041-35447108)
chr2 (292-440)||(3278231-3278379)
chr2 (139-241)||(13266987-13267089)
chr2 (250-318)||(1631889-1631956)
chr2 (245-313)||(45726878-45726945)
chr2 (282-388)||(42020061-42020166)
chr2 (251-388)||(6595165-6595299)
chr2 (250-318)||(24397997-24398066)
chr2 (245-318)||(42288262-42288334)
[»] chr5 (37 HSPs)
chr5 (21-243)||(42954776-42954998)
chr5 (245-388)||(533644-533785)
chr5 (245-388)||(28750807-28750948)
chr5 (245-388)||(39468701-39468842)
chr5 (245-387)||(42426387-42426527)
chr5 (245-388)||(13488078-13488219)
chr5 (245-388)||(42428582-42428723)
chr5 (245-375)||(5887568-5887696)
chr5 (250-375)||(31182861-31182984)
chr5 (245-388)||(32636699-32636840)
chr5 (250-372)||(13239643-13239762)
chr5 (245-388)||(25412637-25412777)
chr5 (245-388)||(30683073-30683213)
chr5 (245-388)||(36074197-36074337)
chr5 (245-387)||(537901-538041)
chr5 (245-387)||(42310087-42310227)
chr5 (245-374)||(3075810-3075937)
chr5 (250-394)||(42926762-42926904)
chr5 (245-375)||(8566098-8566227)
chr5 (245-388)||(13342936-13343076)
chr5 (245-388)||(30182464-30182604)
chr5 (245-311)||(16641092-16641158)
chr5 (250-406)||(16451937-16452091)
chr5 (250-375)||(33831568-33831691)
chr5 (136-208)||(15026936-15027008)
chr5 (250-322)||(19806324-19806394)
chr5 (245-312)||(13695843-13695910)
chr5 (245-318)||(213409-213481)
chr5 (245-318)||(28278260-28278332)
chr5 (245-318)||(40147205-40147277)
chr5 (282-318)||(3325857-3325893)
chr5 (290-367)||(31300387-31300463)
chr5 (250-322)||(37439074-37439144)
chr5 (245-312)||(5057997-5058063)
chr5 (264-313)||(9049512-9049561)
chr5 (340-429)||(9049600-9049689)
chr5 (245-318)||(27637765-27637838)
[»] chr8 (58 HSPs)
chr8 (18-243)||(36315875-36316100)
chr8 (18-244)||(11364458-11364681)
chr8 (245-430)||(8153595-8153780)
chr8 (245-424)||(18141660-18141837)
chr8 (245-388)||(43036298-43036439)
chr8 (245-388)||(33352025-33352166)
chr8 (260-424)||(5689110-5689272)
chr8 (245-372)||(4731549-4731674)
chr8 (245-388)||(15212661-15212802)
chr8 (245-323)||(30291544-30291622)
chr8 (245-393)||(3303822-3303968)
chr8 (245-388)||(27811153-27811294)
chr8 (291-429)||(29796520-29796656)
chr8 (20-235)||(26998274-26998489)
chr8 (245-388)||(12702791-12702931)
chr8 (245-388)||(42498069-42498209)
chr8 (19-177)||(9617810-9617972)
chr8 (245-313)||(8965843-8965911)
chr8 (245-388)||(30143217-30143356)
chr8 (249-388)||(1746375-1746511)
chr8 (245-388)||(17982528-17982668)
chr8 (245-388)||(31218132-31218272)
chr8 (262-373)||(41365016-41365125)
chr8 (245-375)||(6598860-6598988)
chr8 (245-375)||(6674313-6674441)
chr8 (260-373)||(4162390-4162501)
chr8 (18-79)||(17011624-17011685)
chr8 (18-79)||(17545516-17545577)
chr8 (245-372)||(1292615-1292740)
chr8 (245-388)||(19945513-19945653)
chr8 (245-388)||(34254482-34254621)
chr8 (250-322)||(4743360-4743431)
chr8 (245-388)||(44303729-44303869)
chr8 (344-420)||(32902436-32902512)
chr8 (245-372)||(1345523-1345648)
chr8 (245-393)||(40320937-40321096)
chr8 (250-375)||(18106235-18106358)
chr8 (250-375)||(34256663-34256784)
chr8 (292-388)||(4733684-4733778)
chr8 (245-388)||(9765622-9765761)
chr8 (245-313)||(18655349-18655416)
chr8 (262-306)||(41366783-41366827)
chr8 (322-429)||(7597436-7597542)
chr8 (252-375)||(10929689-10929808)
chr8 (569-647)||(29796770-29796849)
chr8 (488-590)||(29797243-29797345)
chr8 (292-412)||(38863720-38863841)
chr8 (245-318)||(4283468-4283540)
chr8 (124-181)||(17011543-17011600)
chr8 (124-181)||(17545601-17545658)
chr8 (245-318)||(44353736-44353809)
chr8 (245-293)||(3772160-3772208)
chr8 (250-318)||(40221689-40221756)
chr8 (245-304)||(19491851-19491909)
chr8 (128-207)||(39721118-39721197)
chr8 (288-424)||(3318743-3318879)
chr8 (250-312)||(42435148-42435209)
chr8 (293-322)||(31513169-31513198)
[»] chr6 (28 HSPs)
chr6 (122-243)||(13436794-13436914)
chr6 (245-388)||(9183183-9183324)
chr6 (245-388)||(33211337-33211478)
chr6 (253-372)||(28137568-28137685)
chr6 (245-334)||(4045351-4045439)
chr6 (245-388)||(33160505-33160645)
chr6 (245-388)||(5406351-5406491)
chr6 (245-388)||(5410676-5410816)
chr6 (245-388)||(16452482-16452622)
chr6 (261-375)||(26954453-26954565)
chr6 (39-181)||(29181642-29181786)
chr6 (245-385)||(5413545-5413682)
chr6 (245-388)||(30834689-30834829)
chr6 (25-114)||(28983527-28983616)
chr6 (245-322)||(2171683-2171758)
chr6 (245-322)||(3039055-3039131)
chr6 (266-375)||(16567094-16567201)
chr6 (245-318)||(21593608-21593680)
chr6 (261-388)||(31404842-31404967)
chr6 (245-318)||(5043571-5043643)
chr6 (250-318)||(603237-603304)
chr6 (258-312)||(26830289-26830342)
chr6 (136-181)||(165904-165949)
chr6 (245-318)||(2973091-2973163)
chr6 (245-318)||(3808861-3808933)
chr6 (143-208)||(14003346-14003411)
chr6 (266-375)||(16568931-16569038)
chr6 (245-318)||(17762933-17763006)
[»] chr1 (52 HSPs)
chr1 (249-423)||(13138130-13138302)
chr1 (245-375)||(4552789-4552917)
chr1 (250-424)||(50169367-50169539)
chr1 (245-388)||(1833397-1833538)
chr1 (250-388)||(31659113-31659249)
chr1 (245-424)||(45644507-45644684)
chr1 (245-372)||(197060-197185)
chr1 (249-388)||(10925098-10925235)
chr1 (245-388)||(28223573-28223714)
chr1 (245-388)||(44455035-44455176)
chr1 (245-429)||(44650315-44650494)
chr1 (245-388)||(49918224-49918366)
chr1 (245-424)||(50167327-50167517)
chr1 (245-388)||(3156741-3156881)
chr1 (245-375)||(3847273-3847401)
chr1 (258-375)||(928142-928258)
chr1 (251-388)||(28220384-28220519)
chr1 (245-424)||(28265706-28265895)
chr1 (245-388)||(37503706-37503847)
chr1 (245-375)||(834319-834447)
chr1 (251-388)||(3189206-3189340)
chr1 (251-388)||(3198023-3198157)
chr1 (251-388)||(3206862-3206996)
chr1 (251-388)||(37560027-37560162)
chr1 (245-394)||(46064787-46064934)
chr1 (258-394)||(15820176-15820310)
chr1 (245-388)||(20762547-20762687)
chr1 (250-393)||(40122355-40122496)
chr1 (245-375)||(8550939-8551067)
chr1 (250-394)||(23555422-23555564)
chr1 (245-375)||(13659488-13659616)
chr1 (249-322)||(37282847-37282920)
chr1 (289-441)||(43342451-43342603)
chr1 (245-308)||(44646936-44646999)
chr1 (18-162)||(29274575-29274719)
chr1 (245-318)||(193555-193627)
chr1 (245-318)||(11348642-11348714)
chr1 (245-318)||(19754438-19754510)
chr1 (245-318)||(29136191-29136263)
chr1 (245-318)||(37033225-37033297)
chr1 (245-318)||(37879063-37879135)
chr1 (245-313)||(13547241-13547308)
chr1 (245-313)||(13549152-13549219)
chr1 (250-298)||(16455585-16455633)
chr1 (322-424)||(777068-777171)
chr1 (245-318)||(37168241-37168313)
chr1 (245-318)||(42298127-42298199)
chr1 (245-318)||(47115115-47115187)
chr1 (245-304)||(41360872-41360930)
chr1 (261-318)||(6808389-6808446)
chr1 (253-306)||(31925867-31925919)
chr1 (249-318)||(34603519-34603588)
[»] chr7 (53 HSPs)
chr7 (10-177)||(29346722-29346890)
chr7 (248-451)||(30843387-30843602)
chr7 (245-388)||(30024884-30025025)
chr7 (245-388)||(47674095-47674236)
chr7 (245-388)||(47676288-47676429)
chr7 (250-388)||(43864119-43864255)
chr7 (250-419)||(36574672-36574839)
chr7 (245-388)||(1113532-1113673)
chr7 (245-388)||(14069985-14070126)
chr7 (245-388)||(14380013-14380154)
chr7 (258-388)||(4253694-4253823)
chr7 (250-375)||(4538697-4538820)
chr7 (245-388)||(31733121-31733262)
chr7 (245-424)||(36146560-36146751)
chr7 (245-372)||(48491470-48491595)
chr7 (245-375)||(38671374-38671502)
chr7 (250-387)||(18126520-18126655)
chr7 (245-394)||(24526049-24526196)
chr7 (245-385)||(48489309-48489447)
chr7 (245-388)||(4586036-4586177)
chr7 (245-424)||(41317586-41317776)
chr7 (251-375)||(23343862-23343985)
chr7 (245-373)||(31105545-31105671)
chr7 (245-424)||(12098011-12098201)
chr7 (245-388)||(23554915-23555055)
chr7 (245-388)||(24514913-24515053)
chr7 (245-388)||(29990930-29991070)
chr7 (245-373)||(26417206-26417332)
chr7 (18-165)||(29367259-29367405)
chr7 (245-388)||(2761454-2761595)
chr7 (245-388)||(4178650-4178790)
chr7 (245-424)||(8153169-8153358)
chr7 (245-374)||(31518684-31518811)
chr7 (250-375)||(41649167-41649289)
chr7 (245-373)||(19502068-19502193)
chr7 (156-208)||(29292199-29292251)
chr7 (245-375)||(496135-496263)
chr7 (245-319)||(27347760-27347833)
chr7 (249-322)||(5514165-5514238)
chr7 (245-322)||(35853855-35853930)
chr7 (245-322)||(48408743-48408818)
chr7 (266-374)||(25615752-25615858)
chr7 (245-318)||(2361124-2361196)
chr7 (20-111)||(32471143-32471234)
chr7 (251-394)||(23565222-23565359)
chr7 (264-318)||(22328568-22328622)
chr7 (245-318)||(4508858-4508930)
chr7 (245-306)||(34310868-34310928)
chr7 (128-207)||(3756682-3756762)
chr7 (245-312)||(8359469-8359535)
chr7 (259-306)||(25767124-25767170)
chr7 (245-318)||(3258938-3259011)
chr7 (245-318)||(6431915-6431987)
[»] chr4 (57 HSPs)
chr4 (260-424)||(52467521-52467683)
chr4 (245-388)||(48142917-48143058)
chr4 (250-395)||(24968979-24969123)
chr4 (245-388)||(5429554-5429695)
chr4 (245-388)||(52082809-52082950)
chr4 (245-388)||(52095514-52095655)
chr4 (245-388)||(54200058-54200199)
chr4 (250-388)||(5207999-5208136)
chr4 (245-388)||(12739702-12739843)
chr4 (245-388)||(12747908-12748049)
chr4 (245-388)||(26175788-26175929)
chr4 (245-388)||(29254369-29254510)
chr4 (250-377)||(47038566-47038691)
chr4 (245-429)||(53345048-53345233)
chr4 (245-388)||(56178789-56178929)
chr4 (245-387)||(34570566-34570706)
chr4 (250-375)||(5871708-5871831)
chr4 (167-243)||(23407669-23407744)
chr4 (245-375)||(13009583-13009711)
chr4 (245-367)||(6542333-6542454)
chr4 (251-388)||(12745594-12745729)
chr4 (251-388)||(37740501-37740635)
chr4 (245-388)||(9927610-9927750)
chr4 (245-424)||(45687335-45687525)
chr4 (245-330)||(48893794-48893879)
chr4 (300-420)||(21704034-21704154)
chr4 (245-322)||(37229874-37229951)
chr4 (245-388)||(36994400-36994540)
chr4 (263-424)||(6677307-6677466)
chr4 (245-306)||(31474105-31474166)
chr4 (245-306)||(51337019-51337080)
chr4 (245-388)||(29999958-30000098)
chr4 (250-313)||(55085521-55085584)
chr4 (293-429)||(39593958-39594093)
chr4 (245-318)||(29056301-29056374)
chr4 (245-306)||(36463541-36463602)
chr4 (245-318)||(40632389-40632461)
chr4 (266-367)||(48142551-48142651)
chr4 (245-321)||(4587899-4587974)
chr4 (18-197)||(4578364-4578541)
chr4 (262-323)||(5349845-5349905)
chr4 (20-85)||(23406633-23406698)
chr4 (98-151)||(23407625-23407678)
chr4 (282-421)||(37755112-37755251)
chr4 (245-318)||(54882964-54883036)
chr4 (245-301)||(3913408-3913464)
chr4 (250-388)||(5370244-5370379)
chr4 (245-318)||(21688192-21688264)
chr4 (245-318)||(46703443-46703516)
chr4 (250-318)||(12119481-12119549)
chr4 (537-595)||(43208285-43208344)
chr4 (245-312)||(50673998-50674064)
chr4 (322-388)||(52093891-52093957)
chr4 (245-306)||(2209669-2209729)
chr4 (249-318)||(6655900-6655968)
chr4 (249-318)||(35662384-35662453)
chr4 (22-59)||(49272623-49272660)
[»] chr3 (54 HSPs)
chr3 (245-388)||(5236608-5236749)
chr3 (250-420)||(9666624-9666792)
chr3 (245-424)||(44700630-44700820)
chr3 (245-424)||(29196539-29196729)
chr3 (261-375)||(39153529-39153641)
chr3 (245-372)||(40734389-40734514)
chr3 (250-388)||(53921660-53921796)
chr3 (245-424)||(32890942-32891119)
chr3 (245-388)||(7762141-7762281)
chr3 (245-388)||(40735258-40735399)
chr3 (250-388)||(51398689-51398825)
chr3 (245-393)||(5373093-5373247)
chr3 (251-375)||(29810756-29810878)
chr3 (245-388)||(5260476-5260616)
chr3 (260-375)||(9581171-9581284)
chr3 (245-372)||(22835154-22835279)
chr3 (245-388)||(45095040-45095180)
chr3 (245-375)||(19684041-19684169)
chr3 (245-429)||(2075209-2075403)
chr3 (253-388)||(7764343-7764475)
chr3 (251-322)||(44331485-44331555)
chr3 (245-375)||(760735-760863)
chr3 (245-375)||(16498918-16499046)
chr3 (245-375)||(26386633-26386761)
chr3 (245-375)||(29682247-29682375)
chr3 (250-388)||(29812938-29813074)
chr3 (245-331)||(31314377-31314461)
chr3 (245-388)||(5258297-5258437)
chr3 (245-388)||(37408334-37408474)
chr3 (245-318)||(46860416-46860490)
chr3 (250-318)||(5434035-5434102)
chr3 (249-393)||(8166612-8166757)
chr3 (245-312)||(4569901-4569968)
chr3 (272-394)||(32744606-32744725)
chr3 (245-322)||(23392061-23392137)
chr3 (38-107)||(32756502-32756569)
chr3 (245-318)||(54593648-54593720)
chr3 (250-388)||(9636284-9636420)
chr3 (260-306)||(23410496-23410542)
chr3 (519-641)||(37761896-37762018)
chr3 (36-90)||(46506041-46506095)
chr3 (91-181)||(46506083-46506171)
chr3 (245-318)||(6095751-6095823)
chr3 (245-322)||(23198091-23198165)
chr3 (245-322)||(23200290-23200364)
chr3 (245-318)||(31340353-31340425)
chr3 (245-306)||(43401954-43402014)
chr3 (245-318)||(43403897-43403969)
chr3 (258-313)||(46173315-46173369)
chr3 (245-302)||(35138857-35138915)
chr3 (255-373)||(54739941-54740056)
chr3 (245-318)||(30236069-30236141)
chr3 (245-306)||(41819675-41819736)
chr3 (245-318)||(49199622-49199694)
[»] scaffold0219 (2 HSPs)
scaffold0219 (519-653)||(27909-28043)
scaffold0219 (326-430)||(27688-27792)
[»] scaffold0066 (1 HSPs)
scaffold0066 (245-388)||(20567-20708)
[»] scaffold0006 (1 HSPs)
scaffold0006 (245-375)||(149249-149377)
[»] scaffold0016 (2 HSPs)
scaffold0016 (245-331)||(114535-114618)
scaffold0016 (322-388)||(114465-114531)
[»] scaffold1519 (1 HSPs)
scaffold1519 (245-388)||(792-931)
[»] scaffold0002 (1 HSPs)
scaffold0002 (250-388)||(434408-434543)
[»] scaffold0286 (1 HSPs)
scaffold0286 (245-306)||(11513-11573)
[»] scaffold0129 (1 HSPs)
scaffold0129 (271-347)||(19117-19191)
[»] scaffold0466 (1 HSPs)
scaffold0466 (250-313)||(7276-7338)
[»] scaffold0027 (1 HSPs)
scaffold0027 (36-172)||(16415-16548)


Alignment Details
Target: chr2 (Bit Score: 588; Significance: 0; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 588; E-Value: 0
Query Start/End: Original strand, 16 - 751
Target Start/End: Original strand, 5700058 - 5700780
Alignment:
Q  16 aaggtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggcttagtcttatgacttagtcttcttctatctttt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||             |||||||||||||||||||||     
T  5700058 aaggtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtagagtaatg-------------acttagtcttcttctatctttc 5700144  T
Q  116 ccttaatgtttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaattcacaattatcatttttat 215  Q
    | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||    
T  5700145 ctttaatgtttctatgtaccaagaacatcaattttaattgagttctaatctatcaattttacctttcatttcacaatcaattcacgattattatttttat 5700244  T
Q  216 tccattataaattttaggaatcattacactttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctc 315  Q
    | ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5700245 ttcattataaattttaggaattattacattttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaagtgtttacaaatgtttctc 5700344  T
Q  316 aacccaaagagaaccctcattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaagtcttcctcaaaacatgaagaa 415  Q
    ||||||| ||||||| ||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5700345 aacccaacgagaaccatcattaatgatcctcaaccctaaagttacctcctttaatttccccaatttctctctcctgaagtcttcctcaaaacatgaagaa 5700444  T
Q  416 tgaagccttgtataaagtccagatcccaagaaatcgtgtccgatttcccaatatcgttccccatttttcagttatatgaatgttatccacaaaatcgggt 515  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5700445 tgaagccttgtataaagtctagatcccaaaaaatcgtgtccgatttccaaatatcgttccccatttttcagttatatgaatgttatccacaaaatcgggt 5700544  T
Q  516 cacgatttctacaaaacgtaccccgatttttgtccaaccaaaactccaaaacttgcacaaaatcgtgccccgatttctcctaatcgtatcacgattttta 615  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  5700545 cacgatttctacaaaacgtaccccgatttttgtccaaccaaaactccaaaacttgcacaaaaccctgccccgatttctcctaatcgtatcacgattttta 5700644  T
Q  616 cctaatctcattcatcaattttgagtcaattcccaacataagagtttataagtttatattattatttatgacaaacaattgtttaagtgttttcaacgtt 715  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5700645 cctaatctcattcttcaattttgagtcaattcccaacataagagtttataagtttatattattatttatggcaaacaattgtttaagtgttttcaacgtt 5700744  T
Q  716 tacaacgtctgtgtagcaaaccacatatttgagttt 751  Q
    ||  ||||| ||||||||||||||||||||||||||    
T  5700745 taagacgtcagtgtagcaaaccacatatttgagttt 5700780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 250 - 388
Target Start/End: Complemental strand, 39284896 - 39284760
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| ||||||||||||| |||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| ||||||    
T  39284896 caatctcaccaatgaacaagatactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccctcaac 39284799  T
Q  350 cttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||||||||||||||| ||||||| | ||||||||||    
T  39284798 cctaaagttacctcctttgatttcccaagtttctctctc 39284760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 245 - 372
Target Start/End: Original strand, 34139923 - 34140048
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| | |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||||     
T  34139923 tttctcaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagactt 34140020  T
Q  345 tcaaccttaaagttacctcctttaattt 372  Q
    |||||| |||||||||||||||| ||||    
T  34140021 tcaaccctaaagttacctcctttgattt 34140048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 38312256 - 38312115
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||| |||||||| ||| |||||||| |||||| |||||||| || || || ||  |    
T  38312256 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacacaaggtgtatac-aatgtttcccaaccc-aagagaactctaatcaaagaacc 38312159  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||| ||||||||||||    
T  38312158 tcaaccctaaagttacctcctttgatttcccaaatttctctctc 38312115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 258 - 424
Target Start/End: Original strand, 33162615 - 33162778
Alignment:
Q  258 ccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagt 357  Q
    |||||||||||||||||| ||| |||||| ||||||||||||||||| |||||||| |||| | ||||||||||| || || ||| ||||||| |||| |    
T  33162615 ccaatgaacaagacactcgatgattttcaatcacccaaggtgtttac-aatgtttcccaactc-aagagaaccctaatcaaagaccctcaaccctaaaat 33162712  T
Q  358 tacctcctttaatttccccaatttctctctcctgaagtcttcctcaaaacatgaagaatgaagcctt 424  Q
    |||||||||| ||||||| | |||||||||| |||| |  | || |||| |||||||||||||||||    
T  33162713 tacctcctttgatttcccaagtttctctctcttgaaattctact-aaaaaatgaagaatgaagcctt 33162778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 245 - 375
Target Start/End: Complemental strand, 42362368 - 42362240
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  42362368 tttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 42362271  T
Q  345 tcaaccttaaagttacctcctttaatttccc 375  Q
    |||||| |||||||||||||||| |||||||    
T  42362270 tcaaccctaaagttacctcctttgatttccc 42362240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 250 - 375
Target Start/End: Original strand, 723901 - 724024
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| | |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||| ||||| || || || ||| ||||||    
T  723901 caatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaaa-agaactctaatcaaagaccctcaac 723998  T
Q  350 cttaaagttacctcctttaatttccc 375  Q
    | |||||||||||||||| |||||||    
T  723999 cctaaagttacctcctttgatttccc 724024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 2334570 - 2334710
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || ||  || |    
T  2334570 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaataccc 2334666  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||| | ||||||||||    
T  2334667 tcaaccctaaagttacctcctttgatttcccaagtttctctctc 2334710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 245 - 375
Target Start/End: Original strand, 11151743 - 11151871
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| |||| || ||||||||||||| |||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  11151743 tttcccaatttcaccaatgaacaagagactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 11151840  T
Q  345 tcaaccttaaagttacctcctttaatttccc 375  Q
    |||||| |||||||||||||||| |||||||    
T  11151841 tcaaccctaaagttacctcctttgatttccc 11151871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 245 - 375
Target Start/End: Complemental strand, 11690517 - 11690389
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| ||||||||  | || || ||| |    
T  11690517 tttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactataatcaaagaccc 11690420  T
Q  345 tcaaccttaaagttacctcctttaatttccc 375  Q
    |||||| |||||||||||||||| |||||||    
T  11690419 tcaaccctaaagttacctcctttgatttccc 11690389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 250 - 388
Target Start/End: Original strand, 36318166 - 36318302
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||| |||| |||||| |||| ||| || || || |||  |||||    
T  36318166 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatatttcccaaccc-aagataactctaatcaaagacattcaac 36318263  T
Q  350 cttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||||||||||||||| ||||||| | ||||||||||    
T  36318264 cctaaagttacctcctttgatttcccaagtttctctctc 36318302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 245 - 394
Target Start/End: Complemental strand, 36773578 - 36773418
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccca------------aagagaaccct 332  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||||            |||||||||||    
T  36773578 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaacccctcaagagaaccct 36773480  T
Q  333 cattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaag 394  Q
     || || ||| ||||||| |||||||||||||||| ||||||| | |||||||||| |||||    
T  36773479 aatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaag 36773418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 5723407 - 5723547
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  5723407 tttctcaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 5723503  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
      |||| ||||||| |||||||| ||||||| | ||||||||||    
T  5723504 caaaccctaaagttgcctcctttgatttcccaagtttctctctc 5723547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 250 - 388
Target Start/End: Original strand, 17057526 - 17057662
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||| |||| |||||| |||||||| || || || |||  |||||    
T  17057526 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatatttcccaaccc-aagagaactctaatcaaagaccttcaac 17057623  T
Q  350 cttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | ||||||||||||| || ||||||  | ||||||||||    
T  17057624 cctaaagttacctccgttgatttccaaattttctctctc 17057662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 250 - 388
Target Start/End: Original strand, 17085509 - 17085645
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||| |||| |||||| |||||||| || || || |||  |||||    
T  17085509 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatatttcccaaccc-aagagaactctaatcaaagaccttcaac 17085606  T
Q  350 cttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | ||||||||||||| || ||||||  | ||||||||||    
T  17085607 cctaaagttacctccgttgatttccaaattttctctctc 17085645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 258 - 388
Target Start/End: Original strand, 36988241 - 36988368
Alignment:
Q  258 ccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagt 357  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||| | |||||| |||||||| |||||| || || || ||| ||||||| ||||||    
T  36988241 ccaatgaacaagacactcaatgattttcactcacc-aaggtgtttacta-tgtttcccaacccaa-gagaactctaatcaaagaccctcaaccctaaagt 36988337  T
Q  358 tacctcctttaatttccccaatttctctctc 388  Q
    |||||||||| ||||||| | ||||||||||    
T  36988338 tacctcctttgatttcccaagtttctctctc 36988368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 7815425 - 7815502
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 322  Q
    |||||||||||| |||||||||||||||| ||||| ||||||  |||| |||||||||||||||||||||||||||||    
T  7815425 tttctcaatctcaccaatgaacaagacacgcaatgattttcacccacctaaggtgtttacaaatgtttctcaacccaa 7815502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 250 - 375
Target Start/End: Original strand, 14633983 - 14634106
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| | |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||| ||||| || || ||  || ||||||    
T  14633983 caatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaaa-agaactctaatcaaaaaccctcaac 14634080  T
Q  350 cttaaagttacctcctttaatttccc 375  Q
      |||||||||||||||| |||||||    
T  14634081 tctaaagttacctcctttgatttccc 14634106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 4503285 - 4503425
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || || ||  |    
T  4503285 tttcccaatctctccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaacc 4503381  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| ||||||| | |||||| ||||||| | ||||||||||    
T  4503382 taaaccctaaagttgcttcctttgatttcccaagtttctctctc 4503425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 29867885 - 29867744
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  29867885 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 29867788  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    ||||||  | |||||||| |||| ||| ||  | ||||||||||    
T  29867787 tcaacccaatagttaccttctttgattcccaaagtttctctctc 29867744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 45099770 - 45099630
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  45099770 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 45099674  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| ||||||| | |||||| ||||||| | ||||||||||    
T  45099673 taaaccctaaagttgcttcctttgatttcccaagtttctctctc 45099630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 253 - 424
Target Start/End: Complemental strand, 13121777 - 13121594
Alignment:
Q  253 tctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccca------------aagagaaccctcattaatg 340  Q
    |||| |||||||||||||||||||||| |||||| |||||||| ||||||||||||||||| |||||||            |||||||||||  | || |    
T  13121777 tctcaccaatgaacaagacactcaatgattttcactcacccaatgtgtttacaaatgtttcccaacccaagagaagctctcaagagaaccctattcaaag 13121678  T
Q  341 actctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaagtcttcctcaaaacatgaagaatgaagcctt 424  Q
    |   ||| || |||| ||||||||||| |||| |  | ||||| |||| |||||||| ||||||||||||||||||||||||||    
T  13121677 atcatcagccctaaaattacctcctttgattttctaagtttctttctcttgaagtctccctcaaaacatgaagaatgaagcctt 13121594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 258 - 420
Target Start/End: Complemental strand, 11067308 - 11067135
Alignment:
Q  258 ccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa------------agagaaccctcattaatgactct 345  Q
    |||||||| ||||||||||||| |||||| ||||||||||||||||||| |||||| ||||| ||            |||||||| | || || |||  |    
T  11067308 ccaatgaataagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaaccgaagcgaagccctcaagagaaccttaatcaaagacaat 11067210  T
Q  346 caaccttaaagttacctcctttaatttccccaatttctctctcctgaagtcttcctcaaaacatgaagaatgaag 420  Q
    ||||| |||||||||||||||| ||||||| | |||||||||| ||||| | ||||||||| |||||||||||||    
T  11067209 caaccataaagttacctcctttgatttccctagtttctctctcttgaagccctcctcaaaaaatgaagaatgaag 11067135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 19261803 - 19261716
Alignment:
Q  18 ggtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggcttagtcttatgacttagtcttcttc 107  Q
    ||||||||||||||||||  |||||| ||||||||||||||| |||||| |||| ||||||||||| ||||||| |||||||||||||||    
T  19261803 ggtatgaagaaaaatgatgaaagtctatcctctctccctttgatactct-tagtagagtaatggctaagtctta-gacttagtcttcttc 19261716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 36205816 - 36205956
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||  ||||||| |||||| |||||||| || || || ||| |    
T  36205816 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-catgtttcccaaccc-aagagaactctaatcaaagaccc 36205912  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| ||||||| | |||||| ||||||| | ||||||||||    
T  36205913 taaaccctaaagttgcttcctttgatttcccaagtttctctctc 36205956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 250 - 372
Target Start/End: Original strand, 12123741 - 12123862
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||||| |||||||||||||||| ||| |||||| ||| |||||||||||| ||||||||| ||| || |||||||| || |  || |||  |||||    
T  12123741 caatctctcaaatgaacaagacactcgatgattttcactcatccaaggtgtttataaatgtttcccaa-cctaagagaactctaaccaaagaccatcaac 12123839  T
Q  350 cttaaagttacctcctttaattt 372  Q
    ||||||||||||| |||| ||||    
T  12123840 cttaaagttacctactttgattt 12123862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 288 - 394
Target Start/End: Original strand, 12632908 - 12633016
Alignment:
Q  288 tcacccaaggtgtttacaaatgtttctcaaccca--aagagaaccctcattaatgactctcaaccttaaagttacctcctttaatttccccaatttctct 385  Q
    ||||||||||||||||||||||||||||||||||  ||   ||| |||||||| ||| ||||||| |||||||| |||||||  |||||| | |||||||    
T  12632908 tcacccaaggtgtttacaaatgtttctcaacccaataaataaactctcattaaagacactcaaccctaaagttatctcctttggtttcccaagtttctct 12633007  T
Q  386 ctcctgaag 394  Q
    ||| |||||    
T  12633008 ctcttgaag 12633016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 251 - 312
Target Start/End: Complemental strand, 17450601 - 17450540
Alignment:
Q  251 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgttt 312  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||||||||| |||||||||    
T  17450601 aatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttgcaaatgttt 17450540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 270 - 375
Target Start/End: Original strand, 14202584 - 14202687
Alignment:
Q  270 acactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagttacctcctttaa 369  Q
    |||||||||  |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| ||||||| |||||||||||| ||| |    
T  14202584 acactcaataattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccctcaaccataaagttacctcatttga 14202681  T
Q  370 tttccc 375  Q
    ||||||    
T  14202682 tttccc 14202687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 24885662 - 24885602
Alignment:
Q  260 aatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccca 321  Q
    |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||||    
T  24885662 aatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccca 24885602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 251 - 318
Target Start/End: Complemental strand, 11049560 - 11049493
Alignment:
Q  251 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||||| ||||  |||||||||||||||| |||||| | |||||||||||||||||||||||| ||||    
T  11049560 aatctcaccaaaaaacaagacactcaatgattttcacttacccaaggtgtttacaaatgtttcccaac 11049493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 13266913 - 13266969
Alignment:
Q  36 tgaagtctctcctctctccctttggtact--ctctagtcgagtaatggcttagtctt 90  Q
    |||||||||||||||||||||||||||||  ||||||| |||||| |||||||||||    
T  13266913 tgaagtctctcctctctccctttggtactccctctagtagagtaacggcttagtctt 13266969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 250 - 318
Target Start/End: Original strand, 35447041 - 35447108
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| |||||| ||||    
T  35447041 caatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcccaac 35447108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 292 - 440
Target Start/End: Original strand, 3278231 - 3278379
Alignment:
Q  292 ccaaggtgtttacaaatgtttctcaacccaaagagaa-ccctcattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcct 390  Q
    |||||||||||||||||||||  |||||| ||||||| | ||||| || ||  ||||||| |||||||||||| ||| ||||| |  ||||||||| | |    
T  3278231 ccaaggtgtttacaaatgttttccaaccc-aagagaatctctcatcaacgatactcaaccctaaagttacctcatttgatttctcagatttctctccctt 3278329  T
Q  391 gaagtcttcctcaaaaca-tgaagaatgaagccttgtataaagtccagatc 440  Q
    |||| ||  ||||||| | |||||||||||||||| |||| ||| ||||||    
T  3278330 gaag-ctcactcaaaaaagtgaagaatgaagccttatatatagttcagatc 3278379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 241
Target Start/End: Original strand, 13266987 - 13267089
Alignment:
Q  139 aacatcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaattcacaattatcatttttattccattataaattttaggaatca 238  Q
    |||||||||||||||||||||||||| ||||||||  |||||| |||  | |||  |||  ||||||||  |||||||||||| | ||||||  ||||||    
T  13266987 aacatcaattttaattgagttctaatatatcaattcaacctttgattccataattgatttgcaattatccattttattccattctcaattttgagaatca 13267086  T
Q  239 tta 241  Q
    |||    
T  13267087 tta 13267089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 318
Target Start/End: Original strand, 1631889 - 1631956
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    ||||||| |||||||||||||||||| ||| |||||| || | |||||||||||||| |||||| ||||    
T  1631889 caatctcaccaatgaacaagacactc-atgattttcactctctcaaggtgtttacaattgtttcccaac 1631956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 45726945 - 45726878
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttc 313  Q
    |||| ||||||| |||||||| |||||||||| || |||||| || |||||||||||||||| ||||||    
T  45726945 tttcccaatctcaccaatgaataagacactca-tgattttcactctcccaaggtgtttacaattgtttc 45726878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 282 - 388
Target Start/End: Original strand, 42020061 - 42020166
Alignment:
Q  282 tttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagttacctcctttaatttccccaattt 381  Q
    ||||| ||||||| | ||||||||||| ||| ||||| ||| ||||||| |||| ||  ||||| ||||||||| ||||||| ||| ||||  | |||||    
T  42020061 tttcactcacccacgatgtttacaaatatttatcaactcaa-gagaaccttcatcaaatactctaaaccttaaatttacctcatttgatttttcaaattt 42020159  T
Q  382 ctctctc 388  Q
    |||||||    
T  42020160 ctctctc 42020166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 251 - 388
Target Start/End: Original strand, 6595165 - 6595299
Alignment:
Q  251 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaacc 350  Q
    |||||| |||||||||||||||| ||||| || ||| || || ||| ||||||||| | |||| || ||||| |||||| || || || ||| |||||||    
T  6595165 aatctcaccaatgaacaagacacccaatgattctcactctccaaag-tgtttacaatt-tttcccagcccaa-gagaactctaatcaaagaccctcaacc 6595261  T
Q  351 ttaaagttacctcctttaatttccccaatttctctctc 388  Q
     |||||||||||| ||| ||||||  | ||||||||||    
T  6595262 ctaaagttacctcatttgatttcctaagtttctctctc 6595299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 250 - 318
Target Start/End: Complemental strand, 24398066 - 24397997
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattc-acccaaggtgtttacaaatgtttctcaac 318  Q
    ||||||| ||||||||||||||||||| || |||||| ||  || ||||||||||||| |||||| ||||    
T  24398066 caatctcaccaatgaacaagacactcattgattttcactcttccaaaggtgtttacaattgtttcccaac 24397997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 245 - 318
Target Start/End: Original strand, 42288262 - 42288334
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||| |||||||||||  || |||||| || |||||||||||||||| |||||| ||||    
T  42288262 tttcccaatctcaccaatgcacaagacactcg-tgattttcactctcccaaggtgtttacaattgtttcccaac 42288334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 9e-63; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 21 - 243
Target Start/End: Complemental strand, 42954998 - 42954776
Alignment:
Q  21 atgaagaaaaatgattgaagtctctcctct--ctccctttggtactctctagtcgagtaatggcttagtcttatgactt-agtcttcttctatcttttcc 117  Q
    |||| ||||||||||  ||||| |||||||  |||||||||| |||||||| | ||||||||||| ||||||| ||||| |||||||||||||||||||     
T  42954998 atgatgaaaaatgatgaaagtcactcctctttctccctttgg-actctctaatagagtaatggctaagtctta-gactttagtcttcttctatcttttct 42954901  T
Q  118 ttaatgtttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaattcacaattatcatttttattc 217  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  42954900 ttaatgtttttatgtacctagaacatcaattttaattgagttctaatctatcaattttacctttcatttcacaatcaattcacaattatca-ttttattc 42954802  T
Q  218 cattataaattttaggaatcattaca 243  Q
    |||||| |||||||| || |||||||    
T  42954801 cattatcaattttagaaaccattaca 42954776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 533785 - 533644
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||| ||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  533785 tttcccaatctcaccaatgaacaagacacgcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 533688  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
     ||||| |||||||||||||||| ||||||| ||||||||||||    
T  533687 ccaaccctaaagttacctcctttgatttcccaaatttctctctc 533644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 28750807 - 28750948
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||| | |||||||| |||||| |||||||| || || || ||| |    
T  28750807 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgttttc-aatgtttcccaaccc-aagagaactctaatcaaagaccc 28750904  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||| | ||||||||||    
T  28750905 tcaaccctaaagttacctcctttgatttcccaagtttctctctc 28750948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 39468701 - 39468842
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | |||||||||||||||||||| |||||| |||| |||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  39468701 tttcccaatctcactaatgaacaagacactcaatgattttcactcactcaaggtgtttac-aatgtttcccaaccc-aagagaactctaatgaaagaccc 39468798  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||| | ||||||||||    
T  39468799 tcaaccctaaagttacctcctttgatttcccaagtttctctctc 39468842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 245 - 387
Target Start/End: Original strand, 42426387 - 42426527
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| |||||||||||||||||||||  |||||| ||||||||||||||||| |||||||| |||  | |||||||| || || || ||| |    
T  42426387 tttctcaatctcaccaatgaacaagacactcaataattttcactcacccaaggtgtttac-aatgtttcccaa-tctaagagaactctaatcaaagaccc 42426484  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctct 387  Q
    |||||| |||||||||||||||| ||||||| | |||||||||    
T  42426485 tcaaccctaaagttacctcctttgatttcccaagtttctctct 42426527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 13488219 - 13488078
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||  |||||||||||||||||||||  |||||| ||||||||||||||||| |||||||  |||||| |||||||| || || || ||| |    
T  13488219 tttcccaatcttaccaatgaacaagacactcaataattttcactcacccaaggtgtttac-aatgttttccaaccc-aagagaactctaatcaaagaccc 13488122  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||| | ||||||||||    
T  13488121 tcaaccctaaagttacctcctttgatttcccaagtttctctctc 13488078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 42428582 - 42428723
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||| |||| |||||| |||||||| || || || |||      
T  42428582 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatatttcccaaccc-aagagaactctaatcaaagacct 42428679  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||| ||||||| ||||||| | ||||||||||    
T  42428680 tcaaccctaaagttatctcctttgatttcccaagtttctctctc 42428723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 245 - 375
Target Start/End: Original strand, 5887568 - 5887696
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| | ||||||||||||| |||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || ||  || |    
T  5887568 tttctcaatctcacaaatgaacaagacattcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaataccc 5887665  T
Q  345 tcaaccttaaagttacctcctttaatttccc 375  Q
    |||||| |||||||||||||||| |||||||    
T  5887666 tcaaccctaaagttacctcctttgatttccc 5887696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 250 - 375
Target Start/End: Complemental strand, 31182984 - 31182861
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| | |||||||||||||||||||| |||||| ||||| ||||||||||| |||||||| |||||| |||||||| || || || ||| ||||||    
T  31182984 caatctcacaaatgaacaagacactcaatgattttcactcacctaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccctcaac 31182887  T
Q  350 cttaaagttacctcctttaatttccc 375  Q
    | |||||||||||||||| |||||||    
T  31182886 cctaaagttacctcctttgatttccc 31182861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 32636840 - 32636699
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||| ||||||||||||| |||||| ||||||||||||||||| |||||||| | |||| |||||||| || || || ||| |    
T  32636840 tttcccaatctcaccaatgaataagacactcaatgattttcactcacccaaggtgtttac-aatgtttcactaccc-aagagaactctaatcaaagaccc 32636743  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| |||||||||||||||| ||||| | | ||||||||||    
T  32636742 ttaaccctaaagttacctcctttgatttctcaagtttctctctc 32636699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 250 - 372
Target Start/End: Complemental strand, 13239762 - 13239643
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || || ||| ||||||    
T  13239762 caatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccctcaac 13239666  T
Q  350 cttaaagttacctcctttaattt 372  Q
    | |||||||||||||||| ||||    
T  13239665 cataaagttacctcctttgattt 13239643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 25412777 - 25412637
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  25412777 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 25412681  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| ||| ||| |||||||| ||||||| | ||||||||||    
T  25412680 taaaccctaatgttgcctcctttgatttcccaagtttctctctc 25412637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 30683073 - 30683213
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | |||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  30683073 tttcccaatctcacaaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcgcaaccc-aagagaactctaatcaaagaccc 30683169  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||| ||||||||| | ||||||| | ||||||||||    
T  30683170 tcaaccctaaaattacctcctctgatttcccaagtttctctctc 30683213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 36074197 - 36074337
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  36074197 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 36074293  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| ||||||| | |||||| ||||||| | ||||||||||    
T  36074294 taaaccctaaagttgcttcctttgatttcccaagtttctctctc 36074337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 245 - 387
Target Start/End: Complemental strand, 538041 - 537901
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | |||||||||||||| ||||| |||||| |||||||||||||||||  ||||||| ||| || |||||||| || || || ||| |    
T  538041 tttcccaatctcactaatgaacaagacacgcaatgattttcactcacccaaggtgtttac-gatgtttcccaagcc-aagagaactctaatcaaagaccc 537944  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctct 387  Q
    |||||| |||||||||||||||| |||| || | |||||||||    
T  537943 tcaaccctaaagttacctcctttgattttccaagtttctctct 537901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 245 - 387
Target Start/End: Original strand, 42310087 - 42310227
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| ||||||| |||||||||||||| |||||| | ||||||  ||||||| ||||||| || | |||||||||||||| || || |||      
T  42310087 tttctcaatctcaccaatgagcaagacactcaatgattttcacttacccaaaatgtttac-aatgttt-tccaaccaaagagaaccctaatcaaagacca 42310184  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctct 387  Q
    | |||| |||||||||||||||| ||||||| | |||||||||    
T  42310185 taaaccctaaagttacctcctttgatttcccaagtttctctct 42310227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 245 - 374
Target Start/End: Original strand, 3075810 - 3075937
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| | ||||||| |||||||||||| |||||| ||| | ||||||||||| |||||||| |||||| ||||||||  | || || ||| |    
T  3075810 tttctcaatctcacaaatgaacgagacactcaatgattttcactcatcaaaggtgtttac-aatgtttcccaaccc-aagagaactttaatcaaagaccc 3075907  T
Q  345 tcaaccttaaagttacctcctttaatttcc 374  Q
    |||||| |||||||||||||||| ||||||    
T  3075908 tcaaccctaaagttacctcctttgatttcc 3075937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 250 - 394
Target Start/End: Complemental strand, 42926904 - 42926762
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| |||| ||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||| || |||||||| || || || |||  ||||     
T  42926904 caatctcaccaaagaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaatcc-aagagaactctaatcaaagaccatcaat 42926807  T
Q  350 cttaaagttacctcctttaatttccccaatttctctctcctgaag 394  Q
    | |||||||||||| ||| ||||||| | ||| |||||| |||||    
T  42926806 cctaaagttacctcatttgatttcccaagtttttctctcttgaag 42926762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 245 - 375
Target Start/End: Original strand, 8566098 - 8566227
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| | |||||||||||||||||||| |||||| ||||||||||||||||| ||||||||  ||||| |||||||| || || || ||| |    
T  8566098 tttctcaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttccgaaccc-aagagaactctaatcaaagaccc 8566195  T
Q  345 tca-accttaaagttacctcctttaatttccc 375  Q
    |||  || |||||||||||| ||| |||||||    
T  8566196 tcatgccctaaagttacctcatttgatttccc 8566227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 13343076 - 13342936
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || |  ||| |    
T  13343076 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcagagaccc 13342980  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| ||||||| | |||||| ||||||| | ||||||||||    
T  13342979 taaaccctaaagttgcttcctttgatttcccaagtttctctctc 13342936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 30182604 - 30182464
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||| | |||||||| |||||| |||||||| || || || ||| |    
T  30182604 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttgc-aatgtttcccaaccc-aagagaactctaatcaaagaccc 30182508  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | | || ||||||| | |||||| ||||||| | ||||||||||    
T  30182507 taatccctaaagttgcttcctttgatttcccaagtttctctctc 30182464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 16641092 - 16641158
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtt 311  Q
    |||||||||||| ||||||||||||||||| ||||  ||||| |||| |||||||||||||||||||    
T  16641092 tttctcaatctcgccaatgaacaagacacttaatgaatttcactcactcaaggtgtttacaaatgtt 16641158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 250 - 406
Target Start/End: Complemental strand, 16452091 - 16451937
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    |||||||  ||||||||||||||||||||| || ||| | ||| ||||||||||||| ||||||  ||||||| |||||| || || || ||  ||||||    
T  16452091 caatctcatcaatgaacaagacactcaatgattgtcacttacc-aaggtgtttacaa-tgtttccgaacccaa-gagaactctaatcaaagatcctcaac 16451995  T
Q  350 cttaaagttacctcctttaatttccccaatttctctctcctgaag-tcttcctcaaaa 406  Q
    | |||||||||||||||| ||||||| | |||  ||||| ||||| ||||||||||||    
T  16451994 cctaaagttacctcctttgatttcccaagttttcctctcttgaagctcttcctcaaaa 16451937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 250 - 375
Target Start/End: Complemental strand, 33831691 - 33831568
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| | |||||| ||||||||||||| |||||| ||||||||||||||||| |||||||  |||||| |||||||| || || || ||| || |||    
T  33831691 caatctcacaaatgaataagacactcaatgattttcactcacccaaggtgtttac-aatgttttccaaccc-aagagaactctaatcaaagacccttaac 33831594  T
Q  350 cttaaagttacctcctttaatttccc 375  Q
    | |||| ||| ||||||| |||||||    
T  33831593 cctaaaattaactcctttgatttccc 33831568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 15027008 - 15026936
Alignment:
Q  136 aagaacatcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaattcacaattatca 208  Q
    |||||||| |||||||||||||||||||||||||||||||||  |||||| || ||| |||| | ||||||||    
T  15027008 aagaacattaattttaattgagttctaatctatcaattttactcttcattcaataattaatttaaaattatca 15026936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 19806394 - 19806324
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 322  Q
    ||||||| ||||||||||||||||||||||  ||||| ||||||||||||||||| |||||||| ||||||||    
T  19806394 caatctcaccaatgaacaagacactcaatg-atttcactcacccaaggtgtttac-aatgtttcccaacccaa 19806324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 13695843 - 13695910
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgttt 312  Q
    |||| |||||||||||| ||| |||| |||||||| |||||| |||| ||||||||||||||||||||    
T  13695843 tttcccaatctctccaaagaaaaagatactcaatgattttcactcacacaaggtgtttacaaatgttt 13695910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 213481 - 213409
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| |||||| ||||    
T  213481 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcccaac 213409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 28278332 - 28278260
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || ||||| |||||||||| |||||| ||||    
T  28278332 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaatgtgtttacaattgtttcccaac 28278260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 40147277 - 40147205
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||||||||||||||| ||| ||| || || |||||||||||||||| |||||| ||||    
T  40147277 tttcccaatctcaccaatgaacaagacactc-atgatttccactctcccaaggtgtttacaattgtttcccaac 40147205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 282 - 318
Target Start/End: Complemental strand, 3325893 - 3325857
Alignment:
Q  282 tttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    ||||| |||||||||||||||||||||||||||||||    
T  3325893 tttcactcacccaaggtgtttacaaatgtttctcaac 3325857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 31300463 - 31300387
Alignment:
Q  290 acccaaggtgtttacaaatgtttctcaacccaaagagaaccctcatta--atgactctcaaccttaaagttacctccttt 367  Q
    ||||||||||||||||| ||||||||||||||| ||||||| ||| ||  | ||| ||||||||||||||||||||||||    
T  31300463 acccaaggtgtttacaa-tgtttctcaacccaa-gagaacc-tcactacaaagacactcaaccttaaagttacctccttt 31300387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 37439144 - 37439074
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 322  Q
    ||||||| |||||||| ||||||||||||| |||||| ||| |||| |||||||| |||||||| ||||||||    
T  37439144 caatctcaccaatgaataagacactcaatgattttcactca-ccaaagtgtttac-aatgtttcccaacccaa 37439074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 5058063 - 5057997
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgttt 312  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| ||  ||||||||||||||| |||||    
T  5058063 tttcccaatctcaccaatgaacaagacactc-atgattttcactcttccaaggtgtttacaattgttt 5057997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 9049512 - 9049561
Alignment:
Q  264 aacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttc 313  Q
    ||||||||||||| || |||| | |||||||| |||||||||||||||||    
T  9049512 aacaagacactcagtgatttttactcacccaaagtgtttacaaatgtttc 9049561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 340 - 429
Target Start/End: Original strand, 9049600 - 9049689
Alignment:
Q  340 gactctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaagtcttcctcaaaacatgaagaatgaagccttgtata 429  Q
    |||| |||||| |||||||| ||||||| ||||| | | |||||||||| ||||| ||  ||| |||||  |||||||||||||| ||||    
T  9049600 gactttcaaccctaaagttatctcctttgatttctcaagtttctctctcttgaagcctctctccaaacaataagaatgaagccttttata 9049689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 245 - 318
Target Start/End: Original strand, 27637765 - 27637838
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||||||||||| |||||||||||||||||||    |||||| ||  |||||||||| |||| |||||| ||||    
T  27637765 tttctcaatctcaccaatgaacaagacactcatgaattttcactcttccaaggtgttcacaattgtttcccaac 27637838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 7e-48; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 18 - 243
Target Start/End: Complemental strand, 36316100 - 36315875
Alignment:
Q  18 ggtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggcttagtcttatgacttagtcttcttctatcttttcc 117  Q
    |||| |||||||||||||  || ||||||||||||||||||| ||||||||||| ||||||||  ||||||||| |||||| ||||||||||| |||||     
T  36316100 ggtaggaagaaaaatgatgaaaatctctcctctctccctttgatactctctagtagagtaatgatttagtcttaggacttaatcttcttctatgttttct 36316001  T
Q  118 ttaatgtttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaattcacaattatcatttttattc 217  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||| | |||| |||||||||||| | | || |||| | | ||| |||||| |||||||     
T  36316000 ttaatgtttatatgtaccaagaacataaattttaattgagttctcaactattaattttacctttaaataaataatccaattacatttatcaattttattt 36315901  T
Q  218 cattataaattttaggaatcattaca 243  Q
    |||| | ||||||  |||||||||||    
T  36315900 cattctcaattttgagaatcattaca 36315875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 18 - 244
Target Start/End: Complemental strand, 11364681 - 11364458
Alignment:
Q  18 ggtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggctta-gtcttatgacttagtcttcttctatcttttc 116  Q
    |||||||||||||||||   | || ||||||||| ||||||||||||||| ||| ||||||||||||| |||||  ||||| ||||||||||||||||||    
T  11364681 ggtatgaagaaaaatgacata-gtatctcctctc-ccctttggtactctcaagtagagtaatggcttaagtctttcgacttggtcttcttctatcttttc 11364584  T
Q  117 cttaatgtttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaattcacaattatcatttttatt 216  Q
    |||    ||| ||||||| ||||||| |||||||||||| |||||||||  |||||||||||||| |||||| || ||||| ||||||||||  |||||     
T  11364583 ctttcccttt-tatgtactaagaacaccaattttaattgggttctaatccctcaattttacctttgatttaataaacaatttacaattatca-atttatc 11364486  T
Q  217 ccattataaattttaggaatcattacac 244  Q
     |||| | ||||||||||| ||||||||    
T  11364485 acattctcaattttaggaaccattacac 11364458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 245 - 430
Target Start/End: Complemental strand, 8153780 - 8153595
Alignment:
Q  245 tttctcaatctctccaatgaacaagacac--tcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgac 342  Q
    |||||||||||| |||||||||| |||||  |||||| |||||| ||| ||||||||| |||||||||||| ||||||||| |||||  | || || |||    
T  8153780 tttctcaatctcaccaatgaacatgacacactcaatgattttcactcatccaaggtgtatacaaatgtttcccaacccaaa-agaacattaatcaaagac 8153682  T
Q  343 tctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaagtcttcctcaaaacatgaagaatgaagccttgtataa 430  Q
    ||||||||||||| ||||||||||| ||||||  |||||||||||| | ||| ||| |  |||||||||||||||||||||| |||||    
T  8153681 tctcaaccttaaaattacctcctttgatttcctaaatttctctctcttaaagcctt-caaaaaacatgaagaatgaagccttttataa 8153595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 245 - 424
Target Start/End: Complemental strand, 18141837 - 18141660
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| || ||||||||||||||||||||||| ||| || ||||||||||| || || ||| |    
T  18141837 tttcacaatctcaccaatgaacaagacactcaatgattttcactcgcccaaggtgtttacaaatgtttcccaa-cctaagagaaccctaatcaaagaccc 18141739  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctcctgaagtcttcctcaaaacatgaagaatgaagcctt 424  Q
    |||||| |||| ||||||||||  |||| || | |||||||||| |||||   | ||||||| |||||||||||||||||    
T  18141738 tcaaccctaaaattacctccttcgattttcctagtttctctctcttgaagctctactcaaaa-atgaagaatgaagcctt 18141660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 43036439 - 43036298
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  43036439 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 43036342  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||| | ||||||||||    
T  43036341 tcaaccctaaagttacctcctttgatttcccaagtttctctctc 43036298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 33352166 - 33352025
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  33352166 tttcccaatctcaccaatgaacaagacactcaatgattttcaatcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 33352069  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| ||||||||||| |||| ||||||| | ||||||||||    
T  33352068 tcaaccctaaagttaccttctttgatttcccaagtttctctctc 33352025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 260 - 424
Target Start/End: Complemental strand, 5689272 - 5689110
Alignment:
Q  260 aatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagtta 359  Q
    |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||| |  ||||||||||| || || ||| ||||||| ||||||||    
T  5689272 aatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttc-caaactcaagagaaccctaatcaaagaccctcaaccctaaagtta 5689175  T
Q  360 cctcctttaatttccccaatttctctctcctgaag-tcttcctcaaaacatgaagaatgaagcctt 424  Q
     ||||||| ||||||| | |||||||||| ||||| |||| | ||||| |||||||||||||||||    
T  5689174 tctcctttgatttccctagtttctctctcttgaagctcttac-caaaaaatgaagaatgaagcctt 5689110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 245 - 372
Target Start/End: Complemental strand, 4731674 - 4731549
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  4731674 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 4731577  T
Q  345 tcaaccttaaagttacctcctttaattt 372  Q
    |||||| |||||||||||||||| ||||    
T  4731576 tcaaccctaaagttacctcctttgattt 4731549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 15212802 - 15212661
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| ||||||||||||||| |||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  15212802 tttcccaatctcaccaatgaacaagacattcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 15212705  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||| ||| ||||||| | ||||||||||    
T  15212704 tcaaccctaaagttacctcatttgatttcccaagtttctctctc 15212661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 245 - 323
Target Start/End: Complemental strand, 30291622 - 30291544
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaa 323  Q
    |||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||    
T  30291622 tttctcaatctcaccaatgaacaagacactcaatgattttcaatcacccaaggtgtttacaaatgtttcccaacccaaa 30291544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 245 - 393
Target Start/End: Original strand, 3303822 - 3303968
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| ||||| ||||||| |||||||| |||||| |||| |||||||||||| |||||||| |||||| ||||||||||| || || ||| |    
T  3303822 tttcccaatctcaccaataaacaagatactcaatgattttcactcactcaaggtgtttac-aatgtttcccaaccc-aagagaaccctaatcaaagaccc 3303919  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctcctgaa 393  Q
    |||||| |||||||||||||||| ||||||| | ||| |||||| ||||    
T  3303920 tcaaccgtaaagttacctcctttgatttcccaagtttttctctcttgaa 3303968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 27811294 - 27811153
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||||||| || | || |||||||| || || || ||| |    
T  27811294 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgttt-tccaacctaagagaactctaatcaaagaccc 27811197  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||| ||||||||||| ||||||| | ||||||||||    
T  27811196 tcaaccctaaatttacctcctttgatttcccaattttctctctc 27811153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 291 - 429
Target Start/End: Original strand, 29796520 - 29796656
Alignment:
Q  291 cccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcct 390  Q
    |||||| | |||||||||||||| |||||||| ||||||||||   || ||  ||||||| |||||||||||||||| ||||| | | |||||||||| |    
T  29796520 cccaagatatttacaaatgtttcccaacccaa-gagaaccctcgccaaagatcctcaaccctaaagttacctcctttgatttctcaagtttctctctctt 29796618  T
Q  391 gaagtcttcctcaaaacatgaagaatgaagccttgtata 429  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  29796619 gaagtc-tcctcaaaacatgaagaatgaagccttatata 29796656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 20 - 235
Target Start/End: Original strand, 26998274 - 26998489
Alignment:
Q  20 tatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggcttagtcttatgacttagtcttcttctatcttttcc-t 118  Q
    ||||||| ||||||||   |||||||| |||||| |||| ||||||||||||  |||||||||||||| ||| |||||||||||||||| | |||||| |    
T  26998274 tatgaagtaaaatgatgagagtctctcttctctctctttagtactctctagtaaagtaatggcttagttttaagacttagtcttcttctgtattttcctt 26998373  T
Q  119 taatgt-ttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaattcacaattatcatttttattc 217  Q
    |  | | |||||||||  ||||||| ||| | | |||||||||  |||||||||||||| |||| | |||| |||||||| |||||||||  |||||||     
T  26998374 ttctctcttctatgtaataagaacaccaaatattattgagttc-gatctatcaattttatctttaagttaataatcaatt-acaattatccattttattt 26998471  T
Q  218 cattataaattttaggaa 235  Q
    |||| | |||||||||||    
T  26998472 cattctcaattttaggaa 26998489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 12702791 - 12702931
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| ||||||||||||||||| |||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  12702791 tttcccaatctcaccaatgaacaagacacttaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 12702887  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||| ||||||||||| ||||||| | ||||||||||    
T  12702888 tcaaccctaaatttacctcctttgatttcccaagtttctctctc 12702931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 42498209 - 42498069
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| || ||||| |||||| ||||||||  | || || ||| |    
T  42498209 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aacgtttcccaaccc-aagagaactttaatcaaagaccc 42498113  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||| | ||||||||||    
T  42498112 tcaaccctaaagttacctcctttgatttcccaagtttctctctc 42498069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 19 - 177
Target Start/End: Complemental strand, 9617972 - 9617810
Alignment:
Q  19 gtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtc----gagtaatggcttagtcttatg-acttagtcttcttctatctt 113  Q
    ||||||||||||||||  ||||||| |||||||| ||| ||||||||||||||     |||||||| ||||   || || | ||||||||||||||||||    
T  9617972 gtatgaagaaaaatgaa-gaagtctttcctctcttcctgtggtactctctagtatagggagtaatgacttaagtttttgtatttagtcttcttctatctt 9617874  T
Q  114 ttccttaatgtttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttac 177  Q
    ||| ||||| ||||||||||| || ||||||||||||||||  ||||| | |||||||||||||    
T  9617873 ttctttaatatttctatgtaccaaaaacatcaattttaattcggttctcaactatcaattttac 9617810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 8965843 - 8965911
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttc 313  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  8965843 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttc 8965911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 30143356 - 30143217
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||  ||||||||||||||||  |||| |||||| |||||||| |||||||||| |||||| |||||||| |||||| || || || ||| |    
T  30143356 tttcccaatctggccaatgaacaagacac--aatgattttcactcacccaatgtgtttacaa-tgtttcccaacccaa-gagaactctaatcaaagaccc 30143261  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||| | ||||||||||    
T  30143260 tcaaccctaaagttacctcctttgatttcccaagtttctctctc 30143217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 249 - 388
Target Start/End: Original strand, 1746375 - 1746511
Alignment:
Q  249 tcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaa 348  Q
    |||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||| ||||||||||| || || || ||| || ||    
T  1746375 tcaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaa-ccaaagagaactctaatcaaggaccctaaa 1746471  T
Q  349 ccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    || ||||||| | |||||| ||||||| | ||||||||||    
T  1746472 ccctaaagttgcttcctttgatttcccaagtttctctctc 1746511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 17982668 - 17982528
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  17982668 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 17982572  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| ||||||| | |||||| ||||||| | ||||||||||    
T  17982571 taaaccctaaagttgcttcctttgatttcccaagtttctctctc 17982528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 31218272 - 31218132
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  31218272 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 31218176  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| ||||||| | |||||| ||||||| | ||||||||||    
T  31218175 taaaccctaaagttgcttcctttgatttcccaagtttctctctc 31218132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 262 - 373
Target Start/End: Original strand, 41365016 - 41365125
Alignment:
Q  262 tgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagttacc 361  Q
    |||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||| ||||| || || || ||| ||||||| ||||||||||    
T  41365016 tgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaaa-agaactctaatcaaagaccctcaaccctaaagttacc 41365113  T
Q  362 tcctttaatttc 373  Q
    || ||| |||||    
T  41365114 tcatttgatttc 41365125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 245 - 375
Target Start/End: Complemental strand, 6598988 - 6598860
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | ||||||||||||||| |||| |||||| |||| |||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  6598988 tttcccaatctcacaaatgaacaagacacttaatgattttcactcactcaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 6598891  T
Q  345 tcaaccttaaagttacctcctttaatttccc 375  Q
    |||||| |||||||| ||||||| |||||||    
T  6598890 tcaaccctaaagttatctcctttgatttccc 6598860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 245 - 375
Target Start/End: Complemental strand, 6674441 - 6674313
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | ||||||||||||||| |||| |||||| |||| |||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  6674441 tttcccaatctcacaaatgaacaagacacttaatgattttcactcactcaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 6674344  T
Q  345 tcaaccttaaagttacctcctttaatttccc 375  Q
    |||||| |||||||| ||||||| |||||||    
T  6674343 tcaaccctaaagttatctcctttgatttccc 6674313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 260 - 373
Target Start/End: Complemental strand, 4162501 - 4162390
Alignment:
Q  260 aatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagtta 359  Q
    |||||||||||||||||||| |||||| || | |||||||||||| |||||||  |||||| ||||||||||| || || ||| ||||||| ||||||||    
T  4162501 aatgaacaagacactcaatgattttcactcgctcaaggtgtttac-aatgttttccaaccc-aagagaaccctaatcaaagaccctcaaccctaaagtta 4162404  T
Q  360 cctcctttaatttc 373  Q
    |||| |||||||||    
T  4162403 cctcttttaatttc 4162390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 17011685 - 17011624
Alignment:
Q  18 ggtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaat 79  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||    
T  17011685 ggtatgaagaaaaatgatgcaagtctctcctctctccctttggtactctctagtagagtaat 17011624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 17545516 - 17545577
Alignment:
Q  18 ggtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaat 79  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||    
T  17545516 ggtatgaagaaaaatgatgcaagtctctcctctctccctttggtactctctagtagagtaat 17545577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 245 - 372
Target Start/End: Original strand, 1292615 - 1292740
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| |||| ||||||||||||||||  |||||| |||||||||||||| || | |||||| ||||||||| ||||| || || || ||| |    
T  1292615 tttctcaatctcaccaaagaacaagacactcaataattttcactcacccaaggtgttcac-agtgtttcccaacccaaa-agaactctaatcaaagaccc 1292712  T
Q  345 tcaaccttaaagttacctcctttaattt 372  Q
    |||||| |||||||||||| ||| ||||    
T  1292713 tcaaccctaaagttacctcatttgattt 1292740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 19945513 - 19945653
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| | |||| |||||||| || || || |||||    
T  19945513 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccgaccc-aagagaactctaatcaaagactc 19945609  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| ||||||| | |||||| ||||||| | ||| ||||||    
T  19945610 taaaccctaaagttgcttcctttgatttcccaagtttgtctctc 19945653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 34254482 - 34254621
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| ||||| || |||||| |||||||| || || || ||| |    
T  34254482 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtctc-caaccc-aagagaactctaatcaaagaccc 34254577  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| ||||||| |||||||| ||||||| | ||||||||||    
T  34254578 taaaccctaaagttgcctcctttgatttcccaagtttctctctc 34254621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 250 - 322
Target Start/End: Original strand, 4743360 - 4743431
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 322  Q
    ||||||| |||||||||||||||||||||| |||||  ||||||||||||||||| |||||||| ||||||||    
T  4743360 caatctcaccaatgaacaagacactcaatgattttcgctcacccaaggtgtttac-aatgtttcccaacccaa 4743431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 44303869 - 44303729
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  44303869 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 44303773  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| |||||||   |||||| ||||| | | ||||||||||    
T  44303772 taaaccctaaagttgtttcctttgatttctcaagtttctctctc 44303729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 344 - 420
Target Start/End: Original strand, 32902436 - 32902512
Alignment:
Q  344 ctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaagtcttcctcaaaacatgaagaatgaag 420  Q
    ||||||| |||||||||||| | | ||||||| | |||||||||| ||||| | |||||||||||||||||||||||    
T  32902436 ctcaaccctaaagttacctcatctgatttcccaagtttctctctcttgaagccctcctcaaaacatgaagaatgaag 32902512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 245 - 372
Target Start/End: Original strand, 1345523 - 1345648
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | ||||||||||||| |||||| |||||| ||||||||||||||||| ||| |||| |||| | |||||||| || || ||  || |    
T  1345523 tttcccaatctcacaaatgaacaagacattcaatgattttcactcacccaaggtgtttac-aatatttcccaactc-aagagaactctaatcaaaaaccc 1345620  T
Q  345 tcaaccttaaagttacctcctttaattt 372  Q
    |||||| ||||||||| |||||| ||||    
T  1345621 tcaaccctaaagttacatcctttgattt 1345648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 245 - 393
Target Start/End: Complemental strand, 40321096 - 40320937
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccca------------aagagaaccct 332  Q
    |||| ||||||| || ||||||||||||||||||| |||||| |||| |||||||||||| |||||||| |||| ||            |||||||||||    
T  40321096 tttcccaatctcacctatgaacaagacactcaatgattttcagtcactcaaggtgtttac-aatgtttcccaactcaagagaacccctcaagagaaccct 40320998  T
Q  333 cattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaa 393  Q
     || || ||| |||||||  ||||||||||||||| ||||||| | |||||||||| ||||    
T  40320997 aatcaaagaccctcaacccgaaagttacctcctttgatttccctagtttctctctcttgaa 40320937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 250 - 375
Target Start/End: Original strand, 18106235 - 18106358
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| || |||||||||||||||||   |||||| ||||||||||||||||| |||||||| |||||| |||||||  || ||||| ||| ||| |     
T  18106235 caatctcaccgatgaacaagacactcaacaattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaaatctaattaaagaccctctat 18106332  T
Q  350 cttaaagttacctcctttaatttccc 375  Q
    | |||||||  ||||||| |||||||    
T  18106333 cctaaagttctctcctttgatttccc 18106358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 250 - 375
Target Start/End: Original strand, 34256663 - 34256784
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| |||||||||||||||||||||| ||||||  || ||||||||||||| |||||||| |||||| |||| ||| || || || ||| || |||    
T  34256663 caatctcaccaatgaacaagacactcaatgattttcacaca-ccaaggtgtttac-aatgtttc-caaccc-aagataactctaatcaaagaccctaaac 34256758  T
Q  350 cttaaagttacctcctttaatttccc 375  Q
    | ||||||| |||||||| |||||||    
T  34256759 cctaaagttgcctcctttgatttccc 34256784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 292 - 388
Target Start/End: Complemental strand, 4733778 - 4733684
Alignment:
Q  292 ccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    ||||||||||||||| |||||| |||||||| |||||| || || || ||| ||||||| |||||||||||| ||| ||||||| | ||||||||||    
T  4733778 ccaaggtgtttacaa-tgtttcccaacccaa-gagaactctaatcaaagaccctcaaccctaaagttacctcttttgatttcccaagtttctctctc 4733684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 9765761 - 9765622
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccc-aaagagaaccctca-ttaatgac 342  Q
    |||| ||||||| ||||||||||||||||||||    ||||| ||||||||||||||||| |||||||| ||||||  ||||||| ||||| | || |||    
T  9765761 tttcccaatctcaccaatgaacaagacactcaa----tttcactcacccaaggtgtttac-aatgtttcccaaccctcaagagaa-cctcactcaaagac 9765668  T
Q  343 tctcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
     ||||||| | ||||||||||||||   ||||| | ||||||||||    
T  9765667 actcaaccctcaagttacctcctttgtattcccaagtttctctctc 9765622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 18655416 - 18655349
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttc 313  Q
    |||||||||||| ||||||||||| |||||| ||| |||||| || |||||||||||||||| ||||||    
T  18655416 tttctcaatctcaccaatgaacaaaacactc-atgattttcactctcccaaggtgtttacaattgtttc 18655349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 41366783 - 41366827
Alignment:
Q  262 tgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 306  Q
    |||||||||||||||||| |||||| |||||||||||||||||||    
T  41366783 tgaacaagacactcaatgattttcactcacccaaggtgtttacaa 41366827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 322 - 429
Target Start/End: Complemental strand, 7597542 - 7597436
Alignment:
Q  322 aagagaaccctcattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaagtcttcctcaaaacatgaagaatgaagc 421  Q
    |||||||||||||  || |||||| |||| |||||||| |||| || ||||| | | ||| |||||| ||||| ||||  ||||||||||||||||||||    
T  7597542 aagagaaccctcaccaaagactcttaaccataaagttatctcccttgatttctcaagtttatctctcttgaagccttca-caaaacatgaagaatgaagc 7597444  T
Q  422 cttgtata 429  Q
    ||| ||||    
T  7597443 cttatata 7597436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 252 - 375
Target Start/End: Complemental strand, 10929808 - 10929689
Alignment:
Q  252 atctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaacct 351  Q
    ||||| |||| ||||||||||||||||| |||||| | | ||||||||||||||| |||| | |||||||| |||||| || || || ||| | |||||     
T  10929808 atctcaccaaagaacaagacactcaatgattttcactaatccaaggtgtttacaa-tgttcc-caacccaa-gagaactctaatcaaagaccc-caaccc 10929713  T
Q  352 taaagttacctcctttaatttccc 375  Q
    |||||||||||||||| |||||||    
T  10929712 taaagttacctcctttgatttccc 10929689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 569 - 647
Target Start/End: Original strand, 29796770 - 29796849
Alignment:
Q  569 tgcacaaaatcgtgccccgatttctcctaatcgtatcacgatttttacctaatc-tcattcatcaattttgagtcaattc 647  Q
    |||| |||||||||||||||||||||  |||| | ||||||||||| || |||| ||| |||||||||||||| ||||||    
T  29796770 tgcataaaatcgtgccccgatttctcaaaatcatgtcacgatttttgccgaatcttcaatcatcaattttgagacaattc 29796849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 488 - 590
Target Start/End: Original strand, 29797243 - 29797345
Alignment:
Q  488 tatatgaatgttatccacaaaatcgggtcacgatttctacaaaacgtaccccgatttttgtccaaccaaaac-tccaaaacttgcacaaaatcgtgcccc 586  Q
    ||||||||  ||||||| ||||||| ||| | |||||||| || ||| |||||||||||||| ||||||||| | |||||| ||| |||||||||| |||    
T  29797243 tatatgaacattatcca-aaaatcgtgtcccaatttctacgaatcgtgccccgatttttgtcaaaccaaaactttcaaaacatgcgcaaaatcgtgtccc 29797341  T
Q  587 gatt 590  Q
    ||||    
T  29797342 gatt 29797345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 292 - 412
Target Start/End: Complemental strand, 38863841 - 38863720
Alignment:
Q  292 ccaaggtgtttacaaatgtttctcaacccaaagagaac-cctcattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcct 390  Q
    ||||| |||||||||||||||| |||||| |||||||| ||||| ||| ||| |||||||||||||||| ||| ||| |||| |  | |||||||||| |    
T  38863841 ccaagatgtttacaaatgtttcccaaccc-aagagaactcctcactaaagacactcaaccttaaagttagctcatttgattttcaaagtttctctctctt 38863743  T
Q  391 gaag-tcttcctcaaaacatgaa 412  Q
    | ||  ||||||||||| |||||    
T  38863742 ggagcccttcctcaaaaaatgaa 38863720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 4283540 - 4283468
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || || ||||||||||||| |||||| ||||    
T  4283540 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcctaaggtgtttacaattgtttcccaac 4283468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 17011600 - 17011543
Alignment:
Q  124 tttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttaccttt 181  Q
    ||||||||||| |||||| ||||||||||||| ||||| | |||||||||||| ||||    
T  17011600 tttctatgtaccaagaacttcaattttaattgggttctcaactatcaattttatcttt 17011543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 17545601 - 17545658
Alignment:
Q  124 tttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttaccttt 181  Q
    ||||||||||| |||||| ||||||||||||| ||||| | |||||||||||| ||||    
T  17545601 tttctatgtaccaagaacttcaattttaattgggttctcaactatcaattttatcttt 17545658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 44353809 - 44353736
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| | ||||||||||| |||||||| |||| | |||||||| |||||||||| |||||| ||||    
T  44353809 tttcccaatctcacaaatgaacaagatactcaatgatttttactcacccaatgtgtttacaattgtttcccaac 44353736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 3772208 - 3772160
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcaccc 293  Q
    |||||||||||| |||||||||||||||||||||  |||||| ||||||    
T  3772208 tttctcaatctcaccaatgaacaagacactcaatcattttcactcaccc 3772160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 318
Target Start/End: Complemental strand, 40221756 - 40221689
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    ||||||| |||| |||||||||||||| || |||||| || |||||||||||||||| |||||| ||||    
T  40221756 caatctcaccaaagaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 40221689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 304
Target Start/End: Original strand, 19491851 - 19491909
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttac 304  Q
    |||| ||||||| |||||||||||||||||||||  |||||| ||||||||| |||||||    
T  19491851 tttcccaatctcaccaatgaacaagacactcaat-attttcactcacccaagatgtttac 19491909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 39721197 - 39721118
Alignment:
Q  128 tatgtacgaagaacatcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaattcacaattatc 207  Q
    ||||||| ||||||||||| | ||| | |||||| |||| |||||||||||||| | |||| |||||||| || ||||||    
T  39721197 tatgtactaagaacatcaactctaagtaagttctcatctctcaattttacctttgaattaataatcaatttacgattatc 39721118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 288 - 424
Target Start/End: Original strand, 3318743 - 3318879
Alignment:
Q  288 tcacccaaggtgtttacaaatgtttctcaacccaaagagaacc-ctcattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctc 386  Q
    ||||||||||||||| ||||||||||  ||||| ||||||||| | ||  || ||| ||||||| |||||||||||| ||| | ||| | | ||||||||    
T  3318743 tcacccaaggtgttttcaaatgtttcctaaccc-aagagaacctcccaccaaagaccctcaaccctaaagttacctcatttgaattctcaactttctctc 3318841  T
Q  387 tcctgaag-tcttcctcaaaacatgaagaatgaagcctt 424  Q
    |  ||||| ||| |||||||| ||||| |||||||||||    
T  3318842 ttttgaagctctgcctcaaaa-atgaacaatgaagcctt 3318879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 250 - 312
Target Start/End: Original strand, 42435148 - 42435209
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgttt 312  Q
    ||||||| |||||||||||||||||| ||| |||||| || ||||| |||||||||| |||||    
T  42435148 caatctcaccaatgaacaagacactc-atgattttcactctcccaaagtgtttacaattgttt 42435209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 293 - 322
Target Start/End: Complemental strand, 31513198 - 31513169
Alignment:
Q  293 caaggtgtttacaaatgtttctcaacccaa 322  Q
    ||||||||||||||||||||||||||||||    
T  31513198 caaggtgtttacaaatgtttctcaacccaa 31513169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 1e-40; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 122 - 243
Target Start/End: Original strand, 13436794 - 13436914
Alignment:
Q  122 tgtttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaattcacaattatcatttttattccatt 221  Q
    |||||||| ||||  |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  13436794 tgtttctacgtacctagaacatcaattttaattgagttccaatctatcaattttacctttcatttcacaatcaattcacaattatca-ttttattccatt 13436892  T
Q  222 ataaattttaggaatcattaca 243  Q
    || ||||||||||| |||||||    
T  13436893 atcaattttaggaaccattaca 13436914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 9183183 - 9183324
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| | |||||| || || || ||| |    
T  9183183 tttctcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aggagaactctaatcaaagaccc 9183280  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||| | ||||||||||    
T  9183281 tcaaccctaaagttacctcctttgatttcccaagtttctctctc 9183324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 33211337 - 33211478
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| ||||||||||| |||||||||| |||||| | ||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  33211337 tttcccaatctcaccaatgaacaaaacactcaatgattttcagtgacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 33211434  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||  |||||||||||||||| ||||||| | ||||||||||    
T  33211435 tcaactgtaaagttacctcctttgatttcccaagtttctctctc 33211478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 253 - 372
Target Start/End: Original strand, 28137568 - 28137685
Alignment:
Q  253 tctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaacctt 352  Q
    |||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| ||||||| |    
T  28137568 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccctcaaccct 28137665  T
Q  353 aaagttacctcctttaattt 372  Q
    ||||||| ||||||| ||||    
T  28137666 aaagttaactcctttgattt 28137685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 245 - 334
Target Start/End: Complemental strand, 4045439 - 4045351
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctca 334  Q
    |||| ||||||||||||| |||||||||||||||| |||||| |||||| ||||||||||||||||||| |||| | |||||||||||||    
T  4045439 tttcccaatctctccaataaacaagacactcaatgattttcactcaccctaggtgtttacaaatgtttcccaactc-aagagaaccctca 4045351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 33160505 - 33160645
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatg-tttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgact 343  Q
    |||| ||||||| |||||||| ||||||||||||| ||||||| ||||| ||||||||||||| |||||| |||||||| |||||| || || || ||||    
T  33160505 tttcccaatctcaccaatgaataagacactcaatgatttttcactcacc-aaggtgtttacaa-tgtttcccaacccaa-gagaactctaatcaaagact 33160601  T
Q  344 ctcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    ||||||| |||||||||||||||| | |||||||| || ||||||    
T  33160602 ctcaaccctaaagttacctcctttga-ttccccaagttttctctc 33160645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 5406351 - 5406491
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||  ||||||| || || || ||| |    
T  5406351 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-gagagaactctaatcaaagaccc 5406447  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| ||||||| |||||||| ||||||| | ||||||||||    
T  5406448 taaaccctaaagttgcctcctttgatttcccaagtttctctctc 5406491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 5410676 - 5410816
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||  ||||||| || || || ||| |    
T  5410676 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-gagagaactctaatcaaagaccc 5410772  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| ||||||| |||||||| ||||||| | ||||||||||    
T  5410773 taaaccctaaagttgcctcctttgatttcccaagtttctctctc 5410816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 16452482 - 16452622
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| ||||||||||||||| |||||||| || || || ||| |    
T  16452482 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttctcaaccc-aagagaactctaatcaaagaccc 16452578  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||  ||||||| | | |||| ||||||| | ||||||||||    
T  16452579 taaactctaaagttgcttactttgatttcccaagtttctctctc 16452622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 261 - 375
Target Start/End: Original strand, 26954453 - 26954565
Alignment:
Q  261 atgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagttac 360  Q
    ||||||||||||||||||| |||||| || || ||||||||||| |||||||| ||| || |||| ||| || || || ||||||||||| |||||||||    
T  26954453 atgaacaagacactcaatgattttcactccccaaaggtgtttac-aatgtttcccaa-cctaagataactctaatcaaagactctcaaccctaaagttac 26954550  T
Q  361 ctcctttaatttccc 375  Q
    ||||||| |||||||    
T  26954551 ctcctttgatttccc 26954565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 39 - 181
Target Start/End: Original strand, 29181642 - 29181786
Alignment:
Q  39 agtctctcctctctccctttggtactctctagtcgagtaatggcttagtcttatgacttagtcttcttctatcttttccttaatgt--ttctatgtacga 136  Q
    |||||||||||||||||||| ||||||| |||| |||||||| |||||||||  |||||||| ||||| ||||||| | ||  | |  || ||||||| |    
T  29181642 agtctctcctctctccctttagtactctttagtagagtaatgacttagtcttgggacttagttttcttgtatctttccttttctcttcttttatgtacta 29181741  T
Q  137 agaacatcaattttaattgagttctaatctatcaattttaccttt 181  Q
    |||||| ||| | |||||| ||||| || ||||||||||| ||||    
T  29181742 agaacaccaactataattgtgttctcatttatcaattttatcttt 29181786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 245 - 385
Target Start/End: Original strand, 5413545 - 5413682
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| |||| |||||||| |||||||| ||||||  ||||||| || || || ||| |    
T  5413545 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaatgtgtttac-aatgtttcccaaccc-gagagaactctaatcaaagaccc 5413641  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctct 385  Q
    | |||| ||||||| |||||||| ||||||| | |||||||    
T  5413642 taaaccctaaagttgcctcctttgatttcccaagtttctct 5413682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 30834689 - 30834829
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| || |||||||||| ||||||||||||||| |||||||| || || || |||      
T  30834689 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccgaggtgtttac-aatgtttctcaaccc-aagagaactctaatcaaagacca 30834785  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| ||||||| | |||||| ||||| | | ||||||||||    
T  30834786 taaaccctaaagttgcttcctttgatttctcaagtttctctctc 30834829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 28983527 - 28983616
Alignment:
Q  25 agaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggctt-agtcttatgacttagtcttcttctatcttt 114  Q
    ||||||||||| |||||||| ||||||||| |||||||||||||| | |||||||| |||  |||||| |||| |||||||||||||||||    
T  28983527 agaaaaatgat-gaagtctcccctctctccgtttggtactctctaatagagtaatgacttgggtcttaggactaagtcttcttctatcttt 28983616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 2171683 - 2171758
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 322  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  2171683 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 2171758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 3039055 - 3039131
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 322  Q
    |||| ||||||| ||||||||||||||| |||||| |||||| |||| |||||||||||| |||||||| ||||||||    
T  3039055 tttcccaatctcaccaatgaacaagacattcaatgattttcactcactcaaggtgtttac-aatgtttcccaacccaa 3039131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 266 - 375
Target Start/End: Complemental strand, 16567201 - 16567094
Alignment:
Q  266 caagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagttacctcct 365  Q
    |||||||||||||| |||||| ||||||||||||||||| |||||||| ||| || |||||||| || || || ||| || |||| |||||||| |||||    
T  16567201 caagacactcaatgattttcactcacccaaggtgtttac-aatgtttc-caaacccaagagaactctaatcaaagacccttaaccctaaagttaactcct 16567104  T
Q  366 ttaatttccc 375  Q
    || |||||||    
T  16567103 ttgatttccc 16567094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 21593680 - 21593608
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| |||||| ||||    
T  21593680 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcccaac 21593608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 261 - 388
Target Start/End: Original strand, 31404842 - 31404967
Alignment:
Q  261 atgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcat-taatgactctcaaccttaaagtta 359  Q
    ||||||||||||||||||| |||||| ||| ||||||||||||| |||||||  |||||| |||||||| || ||  || ||| || |||| |||||||     
T  31404842 atgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgttttccaaccc-aagagaactctaatcaaaagaccctaaaccctaaagttg 31404938  T
Q  360 cctcctttaatttccccaatttctctctc 388  Q
    |||||||| ||||||| | ||||||||||    
T  31404939 cctcctttgatttcccaagtttctctctc 31404967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 5043643 - 5043571
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||||||||||| | |||||||||||||||| ||| |||||| || | |||||||||||||| |||||| ||||    
T  5043643 tttctcaatctcacgaatgaacaagacactc-atgattttcactctcacaaggtgtttacaattgtttcccaac 5043571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 318
Target Start/End: Original strand, 603237 - 603304
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    ||||||| |||||||||||||||||| ||| |||||| |  |||||||||||||||| |||||| ||||    
T  603237 caatctcaccaatgaacaagacactc-atgattttcactatcccaaggtgtttacaattgtttcccaac 603304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 258 - 312
Target Start/End: Original strand, 26830289 - 26830342
Alignment:
Q  258 ccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgttt 312  Q
    ||||||||||||||||||| || |||||| || |||||||||||||||| |||||    
T  26830289 ccaatgaacaagacactca-tgattttcactctcccaaggtgtttacaattgttt 26830342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 165904 - 165949
Alignment:
Q  136 aagaacatcaattttaattgagttctaatctatcaattttaccttt 181  Q
    ||||||| |||||||||||| |||||||||||||| ||||| ||||    
T  165904 aagaacaccaattttaattgtgttctaatctatcacttttatcttt 165949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 245 - 318
Target Start/End: Original strand, 2973091 - 2973163
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||||||| |||||| | || |||||| || |||||||||||||||| |||||| ||||    
T  2973091 tttcccaatctcaccaatgaacacgacactta-tgattttcactctcccaaggtgtttacaattgtttcccaac 2973163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 245 - 318
Target Start/End: Original strand, 3808861 - 3808933
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||||||||||||||   || |||||| || |||||||||||||||| |||||| ||||    
T  3808861 tttcccaatctcaccaatgaacaagacact-tgtgattttcactctcccaaggtgtttacaattgtttcccaac 3808933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 14003346 - 14003411
Alignment:
Q  143 tcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaattcacaattatca 208  Q
    |||||||||||  ||||||| ||||||||||||||||||||  | | ||||||||||  |||||||    
T  14003346 tcaattttaatgaagttctagtctatcaattttacctttcacatgataatcaattcatcattatca 14003411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 266 - 375
Target Start/End: Complemental strand, 16569038 - 16568931
Alignment:
Q  266 caagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagttacctcct 365  Q
    |||||||||||||| |||||| | ||||||||||||||| |||||||| ||| || |||||||| || || || ||| || |||| |||| |||  ||||    
T  16569038 caagacactcaatgattttcacttacccaaggtgtttac-aatgtttc-caaacccaagagaactctaatcaaagacccttaaccctaaatttaattcct 16568941  T
Q  366 ttaatttccc 375  Q
    || |||||||    
T  16568940 ttgatttccc 16568931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 17763006 - 17762933
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||||||||||| |||||||||||||||||||    |||||| || | ||| |||||||||| |||||| ||||    
T  17763006 tttctcaatctcaccaatgaacaagacactcatgaattttcactctctcaaagtgtttacaattgtttcccaac 17762933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 4e-37; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 249 - 423
Target Start/End: Original strand, 13138130 - 13138302
Alignment:
Q  249 tcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaa 348  Q
    |||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| | |||| ||||||||||| || || ||| |||||    
T  13138130 tcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttc-ccaccccaagagaaccctaatcaaagaccctcaa 13138227  T
Q  349 ccttaaagttacctcctttaatttccccaatttctctctcctgaag-tcttcctcaaaacatgaagaatgaagcct 423  Q
    || |||||||||||||||| ||||||| | ||| |||||| ||||| |||||||||||| || |||||||||||||    
T  13138228 ccctaaagttacctcctttgatttcccaagtttttctctcttgaagctcttcctcaaaa-attaagaatgaagcct 13138302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 245 - 375
Target Start/End: Original strand, 4552789 - 4552917
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| |||||||||||||||||||||| |||||  ||||||||||||||||| ||||||||||||||| |||||||||   ||||| ||| |    
T  4552789 tttctcaatctcaccaatgaacaagacactcaatgattttccctcacccaaggtgtttac-aatgtttctcaaccc-aagagaacctcaattaaagaccc 4552886  T
Q  345 tcaaccttaaagttacctcctttaatttccc 375  Q
    |||||| ||||||||||||||||||||||||    
T  4552887 tcaaccctaaagttacctcctttaatttccc 4552917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 250 - 424
Target Start/End: Original strand, 50169367 - 50169539
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||||| ||||| |||||||| |||||| |||| |||||| || ||  || ||||||    
T  50169367 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtatttac-aatgtttcccaaccc-aagataaccctaataaaaaaccctcaac 50169464  T
Q  350 cttaaagttacctcctttaatttccccaatttctctctcctgaag-tcttcctcaaaacatgaagaatgaagcctt 424  Q
    | |||||||||||||||| ||||||| | |||||||||| ||||| |||| | ||||| |||||||||||||||||    
T  50169465 cctaaagttacctcctttgatttccctagtttctctctcttgaagctcttac-caaaaaatgaagaatgaagcctt 50169539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 1833538 - 1833397
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||| || |||||||| || || || ||| |    
T  1833538 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaatcc-aagagaactctaatcaaagaccc 1833441  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    ||||||||||||||| ||||||| ||||||| | ||||||||||    
T  1833440 tcaaccttaaagttatctcctttgatttcccaagtttctctctc 1833397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 250 - 388
Target Start/End: Complemental strand, 31659249 - 31659113
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||  ||||| |||||||| || || || ||| ||||||    
T  31659249 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttccgaaccc-aagagaactctaatcaaagaccctcaac 31659152  T
Q  350 cttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||||||||||||||| ||||||| | ||||||||||    
T  31659151 cctaaagttacctcctttgatttcccaagtttctctctc 31659113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 45644507 - 45644684
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| ||||||||||||||||| |||| |||||| ||||||||| ||||||| ||||||| || | || ||||||||||| || || ||| |    
T  45644507 tttctcaatctcaccaatgaacaagacacttaatgattttcactcacccaagatgtttac-aatgttt-tccaacctaagagaaccctaatcaaagaccc 45644604  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctcctgaag-tcttcctcaaaacatgaagaatgaagcctt 424  Q
    |||||| |||||||| ||||||| ||||||| | ||| |||||| ||||| |||||| ||||| ||||||||| |||||||    
T  45644605 tcaaccctaaagttatctcctttgatttccctagtttttctctcttgaagctcttcc-caaaaaatgaagaataaagcctt 45644684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 245 - 372
Target Start/End: Original strand, 197060 - 197185
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| | |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  197060 tttctcaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 197157  T
Q  345 tcaaccttaaagttacctcctttaattt 372  Q
    |||||| |||||||||||||||| ||||    
T  197158 tcaaccctaaagttacctcctttgattt 197185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 249 - 388
Target Start/End: Complemental strand, 10925235 - 10925098
Alignment:
Q  249 tcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaa 348  Q
    |||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| ||||||||  | || || ||| |||||    
T  10925235 tcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactataatcaaagaccctcaa 10925138  T
Q  349 ccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    || |||||||||||||||| |||| || | ||||||||||    
T  10925137 ccctaaagttacctcctttgattttccaagtttctctctc 10925098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 28223573 - 28223714
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||| | | |||||||| |||||| |||||||| || || || ||| |    
T  28223573 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtcttc-aatgtttcccaaccc-aagagaactctaatcaaagaccc 28223670  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||| | ||||||||||    
T  28223671 tcaaccctaaagttacctcctttgatttcccaagtttctctctc 28223714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 44455176 - 44455035
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||| ||| || || || ||| |    
T  44455176 tttcccaatctcaccaatgaacaagacactcaatggttttcactcacccaaggtgtttac-aatgtttcccaaccc-aagaaaactctaatcaaagaccc 44455079  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| |||| || | ||||||||||    
T  44455078 tcaaccctaaagttacctcctttgatttaccaagtttctctctc 44455035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 245 - 429
Target Start/End: Original strand, 44650315 - 44650494
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||| |||||||||||||||| || | |  |||||||||||||  || |||||    
T  44650315 tttctcaatctctccaatgaacaagacactcaataattttcactcacccaaagtgtttacaaatgttt-tccaacttaagagaaccctcaccaaagactc 44650413  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctcctgaagtcttcctcaaaacatgaagaatgaagccttgtata 429  Q
    ||| || |||| ||  ||||||| ||||||| |     |||||| ||||||||  ||||||||| ||||||||||||||| ||||    
T  44650414 tcatccctaaaattttctcctttgatttcccaa----gtctctcttgaagtctcactcaaaacacgaagaatgaagccttttata 44650494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 49918366 - 49918224
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||   |||||||| ||| || |||||||| || || || |||      
T  49918366 tttctcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgttttataatgtttcccaatcc-aagagaactctaatcaaagacct 49918268  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||| | ||||||||||    
T  49918267 tcaaccctaaagttacctcctttgatttcccaagtttctctctc 49918224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 50167327 - 50167517
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccca------------aagagaaccct 332  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||||            |||||||||||    
T  50167327 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaacccctcaagagaaccct 50167425  T
Q  333 cattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaag-tcttcctcaaaacatgaagaatgaagcctt 424  Q
     || || ||| ||||||| |||||||||||||||| ||||||| | |||||||||| ||||| |||| | ||||| |||||||||||||||||    
T  50167426 aatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctcttac-caaaaaatgaagaatgaagcctt 50167517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 3156881 - 3156741
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||| ||| ||||||||| |||||||| ||| || |||||||| || || || ||| |    
T  3156881 tttctcaatctcaccaatgaacaagacactcaatgattttcactca-ccagggtgtttac-aatgtttc-caaacccaagagaactctaatcaaagaccc 3156785  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||| | ||||||||||    
T  3156784 tcaaccctaaagttacctcctttgatttcccaagtttctctctc 3156741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 245 - 375
Target Start/End: Original strand, 3847273 - 3847401
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  3847273 tttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 3847370  T
Q  345 tcaaccttaaagttacctcctttaatttccc 375  Q
    || ||| |||||||||||||||| |||||||    
T  3847371 tcgaccctaaagttacctcctttgatttccc 3847401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 258 - 375
Target Start/End: Original strand, 928142 - 928258
Alignment:
Q  258 ccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagt 357  Q
    |||| |||||||||||||| || |||||| |||||||||||||||||||||||||| |||||| ||||||| ||| || || |||  |||||| ||||||    
T  928142 ccaaagaacaagacactcattgattttcactcacccaaggtgtttacaaatgtttcccaaccc-aagagaatcctaatcaaagaccttcaaccataaagt 928240  T
Q  358 tacctcctttaatttccc 375  Q
    |||||||||| |||||||    
T  928241 tacctcctttgatttccc 928258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 251 - 388
Target Start/End: Original strand, 28220384 - 28220519
Alignment:
Q  251 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaacc 350  Q
    |||||| |||||||| ||||||||||||| |||||| ||||||||||||||| | |||| ||| |||||| |||||||| || || || ||| |||||||    
T  28220384 aatctcaccaatgaataagacactcaatgattttcactcacccaaggtgttttc-aatgcttcccaaccc-aagagaactctaatcaaagaccctcaacc 28220481  T
Q  351 ttaaagttacctcctttaatttccccaatttctctctc 388  Q
     |||||||||||||||| ||||||| | ||||||||||    
T  28220482 ctaaagttacctcctttgatttcccaagtttctctctc 28220519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 28265706 - 28265895
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccca------------aagagaaccct 332  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||| |            ||||||| |||    
T  28265706 tttcccaatctcgccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacctaagagaacccctcaagagaa-cct 28265803  T
Q  333 cattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaag-tcttcctcaaaacatgaagaatgaagcctt 424  Q
     || || ||| ||||||| |||||||||||||||| ||||||| | |||||||||| ||||| |||||| ||||| |||||||||||||||||    
T  28265804 aatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctcttcc-caaaaaatgaagaatgaagcctt 28265895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 37503706 - 37503847
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||| |||  |||||| || ||||| || || || ||| |    
T  37503706 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatattttccaaccc-aatagaactctaatcaaagaccc 37503803  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||| ||||||||| ||||||| | ||||||||||    
T  37503804 tcaaccctaaagtcacctcctttgatttcccaagtttctctctc 37503847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 245 - 375
Target Start/End: Original strand, 834319 - 834447
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | |||||||||||||||||||| ||||||  |||||||||||||||| |||||||| |||||| ||||||||  | || || ||| |    
T  834319 tttcccaatctcacaaatgaacaagacactcaatgattttcacgcacccaaggtgtttac-aatgtttcccaaccc-aagagaactttaatcaaagaccc 834416  T
Q  345 tcaaccttaaagttacctcctttaatttccc 375  Q
    |||||| |||||||||||||||| |||||||    
T  834417 tcaaccctaaagttacctcctttgatttccc 834447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 251 - 388
Target Start/End: Complemental strand, 3189340 - 3189206
Alignment:
Q  251 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaacc 350  Q
    |||||| ||||||||||||||||||| || |||||| ||||| ||||||||||||| |||||| |||||||| ||||||  | || || ||| |||||||    
T  3189340 aatctcaccaatgaacaagacactcagtgattttcactcacc-aaggtgtttacaa-tgtttcccaacccaa-gagaactttaatcaaagaccctcaacc 3189244  T
Q  351 ttaaagttacctcctttaatttccccaatttctctctc 388  Q
     |||||||||||||||| ||||||| | ||||||||||    
T  3189243 ctaaagttacctcctttgatttcccaagtttctctctc 3189206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 251 - 388
Target Start/End: Complemental strand, 3198157 - 3198023
Alignment:
Q  251 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaacc 350  Q
    |||||| ||||||||||||||||||| || |||||| ||||| ||||||||||||| |||||| |||||||| ||||||  | || || ||| |||||||    
T  3198157 aatctcaccaatgaacaagacactcagtgattttcactcacc-aaggtgtttacaa-tgtttcccaacccaa-gagaactttaatcaaagaccctcaacc 3198061  T
Q  351 ttaaagttacctcctttaatttccccaatttctctctc 388  Q
     |||||||||||||||| ||||||| | ||||||||||    
T  3198060 ctaaagttacctcctttgatttcccaagtttctctctc 3198023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 251 - 388
Target Start/End: Complemental strand, 3206996 - 3206862
Alignment:
Q  251 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaacc 350  Q
    |||||| ||||||||||||||||||| || |||||| ||||| ||||||||||||| |||||| |||||||| ||||||  | || || ||| |||||||    
T  3206996 aatctcaccaatgaacaagacactcagtgattttcactcacc-aaggtgtttacaa-tgtttcccaacccaa-gagaactttaatcaaagaccctcaacc 3206900  T
Q  351 ttaaagttacctcctttaatttccccaatttctctctc 388  Q
     |||||||||||||||| ||||||| | ||||||||||    
T  3206899 ctaaagttacctcctttgatttcccaagtttctctctc 3206862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 251 - 388
Target Start/End: Original strand, 37560027 - 37560162
Alignment:
Q  251 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaacc 350  Q
    |||||| |||||||||||||||||||||| |||||| ||||| || |||||||| ||||||| |||| || |||||||| || || || ||| |||||||    
T  37560027 aatctcaccaatgaacaagacactcaatgattttcactcacctaatgtgtttac-aatgttt-tcaaacccaagagaactctaatcaaagaccctcaacc 37560124  T
Q  351 ttaaagttacctcctttaatttccccaatttctctctc 388  Q
    ||||||||||||| ||| ||||| | | ||||||||||    
T  37560125 ttaaagttacctcatttgatttctcaagtttctctctc 37560162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 245 - 394
Target Start/End: Complemental strand, 46064934 - 46064787
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | |||||||||||||||||||| |||||| ||||||||||||||||| ||||||| || |||| ||||||||| | || || ||| |    
T  46064934 tttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgttt-tccaccccaagagaaccataatcaaagaccc 46064837  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctcctgaag 394  Q
    |||||  ||||||||||| |||| ||||||| | ||| |||||| |||||    
T  46064836 tcaacaataaagttaccttctttgatttcccaagtttttctctcttgaag 46064787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 258 - 394
Target Start/End: Complemental strand, 15820310 - 15820176
Alignment:
Q  258 ccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagt 357  Q
    |||| ||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||| | |||||||| || || || ||| ||||||| ||||||    
T  15820310 ccaaagaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaactc-aagagaactctaatcaaagaccctcaaccctaaagt 15820213  T
Q  358 tacctcctttaatttccccaatttctctctcctgaag 394  Q
    |||||| ||| ||||||| | ||| |||||| |||||    
T  15820212 tacctcttttgatttcccaagtttttctctcttgaag 15820176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 20762687 - 20762547
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| ||||||||||||| |||||||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  20762687 tttctcaatctcaccaatgaacaagatactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 20762591  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| ||||||| | |||||| ||||||| | ||||||||||    
T  20762590 taaaccctaaagttgcttcctttgatttcccaagtttctctctc 20762547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 250 - 393
Target Start/End: Original strand, 40122355 - 40122496
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| | ||||||||||||| |||||| |||| | ||||||||||||||||| |||||||| ||| || |||| ||| || ||||||||  ||||||    
T  40122355 caatctcacaaatgaacaagacattcaatgatttttactcacccaaggtgtttac-aatgtttcccaatcc-aagataactctaattaatgatcctcaac 40122452  T
Q  350 cttaaagttacctcctttaatttccccaatttctctctcctgaa 393  Q
    | |||||||||||||||| ||||||| | ||| |||||| ||||    
T  40122453 cataaagttacctcctttgatttcccaagtttttctctcttgaa 40122496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 245 - 375
Target Start/End: Original strand, 8550939 - 8551067
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | |||||||||||||||||||| |||||| |||||||| |||||||| ||||||||| ||||| |||||||| || || || ||| |    
T  8550939 tttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaatgtgtttac-aatgtttcttaaccc-aagagaactctaatcaaagaccc 8551036  T
Q  345 tcaaccttaaagttacctcctttaatttccc 375  Q
    | |||| |||||||| ||||||| |||||||    
T  8551037 ttaaccctaaagttaactcctttgatttccc 8551067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 250 - 394
Target Start/End: Original strand, 23555422 - 23555564
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| |||| ||| ||||||||||||  |||||||||||||||||||||||| |||||||| |||||| ||||||||  | || || ||  ||||||    
T  23555422 caatctcaccaaagaataagacactcaataattttcattcacccaaggtgtttac-aatgtttcccaaccc-aagagaactttaatcaaagatcctcaac 23555519  T
Q  350 cttaaagttacctcctttaatttccccaatttctctctcctgaag 394  Q
    | | |||||||||||||| ||||||| | ||| |||||| |||||    
T  23555520 cctgaagttacctcctttgatttcccaagtttttctctcttgaag 23555564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 245 - 375
Target Start/End: Original strand, 13659488 - 13659616
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | |||||||||||||||||||| |||||| |  |||||||||||||| |||||||||||| || |||||||| || || || ||| |    
T  13659488 tttcccaatctcacaaatgaacaagacactcaatgattttcactaccccaaggtgtttac-aatgtttctcaa-cctaagagaactctaatcaaagaccc 13659585  T
Q  345 tcaaccttaaagttacctcctttaatttccc 375  Q
    ||||||   |||||||||||||| |||||||    
T  13659586 tcaacccacaagttacctcctttgatttccc 13659616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 249 - 322
Target Start/End: Original strand, 37282847 - 37282920
Alignment:
Q  249 tcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 322  Q
    ||||||||||||||||||||||||||||||| |||||| |||  ||||||||||| ||| ||||  ||||||||    
T  37282847 tcaatctctccaatgaacaagacactcaatggttttcactcatacaaggtgtttaaaaaagttttccaacccaa 37282920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 441
Target Start/End: Original strand, 43342451 - 43342603
Alignment:
Q  289 cacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    ||||||| |||| || ||||||||| ||||| || |||||| ||||  || ||| |||| ||  |||||||| ||||||| |||||  | ||||||||||    
T  43342451 cacccaaagtgtatagaaatgtttcccaaccgaa-gagaactctcaccaaagaccctcatcccaaaagttacatcctttagtttcctaactttctctctc 43342549  T
Q  389 ctgaagtcttc-ctcaaaacatgaagaatgaagccttgtataaagtccagatcc 441  Q
     ||||| || | ||||||||||||||||||||| ||| |||| |||||||||||    
T  43342550 ttgaagcctccgctcaaaacatgaagaatgaagtcttatatagagtccagatcc 43342603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 44646936 - 44646999
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaat 308  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||| |||| || |||||||||    
T  44646936 tttctcaatctctccaatgaacaagacactcaataattttcactcatccaaagtatttacaaat 44646999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 29274575 - 29274719
Alignment:
Q  18 ggtatgaagaaaaatgattgaagtctctcctctctc-cctttggtactctctagtcgagtaatggctt-agtcttatgacttagtcttcttctatctttt 115  Q
    |||||||| || |||||| ||||||||||||||| | |||||| ||||||||||| ||||||||| || |||| |  ||||||| |||||||||||||||    
T  29274575 ggtatgaaaaataatgat-gaagtctctcctctccctcctttgatactctctagtagagtaatggtttaagtccttggacttagccttcttctatctttt 29274673  T
Q  116 ccttaatgtttctatgtacgaagaacatcaattttaattgagttcta 162  Q
     ||| || ||| ||||||| || || | || ||||||||| ||||||    
T  29274674 tctttatcttt-tatgtactaaaaataccagttttaattgggttcta 29274719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 193627 - 193555
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||||||||||| |||||||||||||||||| ||| ||||||  | |||||||||||||||| |||||| ||||    
T  193627 tttctcaatctcaccaatgaacaagacactc-atgattttcaccctcccaaggtgtttacaattgtttcccaac 193555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 11348714 - 11348642
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| |||||| ||||    
T  11348714 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcccaac 11348642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 19754510 - 19754438
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||||||||||| |||||||||||||||||| ||| |||||| || | |||||||||||| |||||||| ||||    
T  19754510 tttctcaatctcaccaatgaacaagacactc-atgattttcactctctcaaggtgtttacgaatgtttcccaac 19754438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 29136263 - 29136191
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| |||||| ||||    
T  29136263 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcacaac 29136191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 245 - 318
Target Start/End: Original strand, 37033225 - 37033297
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| |||||| ||||    
T  37033225 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcccaac 37033297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 245 - 318
Target Start/End: Original strand, 37879063 - 37879135
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| |||||| ||||    
T  37879063 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcccaac 37879135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 13547241 - 13547308
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttc 313  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| ||||||    
T  13547241 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttc 13547308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 13549152 - 13549219
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttc 313  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| ||||||    
T  13549152 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttc 13549219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 250 - 298
Target Start/End: Complemental strand, 16455633 - 16455585
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggt 298  Q
    ||||||| |||||||||||||||||||||| |||||| |||||||||||    
T  16455633 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggt 16455585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 322 - 424
Target Start/End: Complemental strand, 777171 - 777068
Alignment:
Q  322 aagagaaccctcattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaag-tcttcctcaaaacatgaagaatgaag 420  Q
    ||||||||||| || || |||  |||||| |||||||||||||||| ||||||| | |||||||||| ||||| |||| |  |||| ||||||||||||     
T  777171 aagagaaccctaatcaaagaccatcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctcttaccaaaaaaatgaagaatgaat 777072  T
Q  421 cctt 424  Q
    ||||    
T  777071 cctt 777068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 37168313 - 37168241
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || | |||||||||||||| |||||| ||||    
T  37168313 tttcccaatctcaccaatgaacaagacactc-atgattttcactctctcaaggtgtttacaattgtttcccaac 37168241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 318
Target Start/End: Original strand, 42298127 - 42298199
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||||||||||||||| ||| |||| | || |||||||||||||||| |||||| ||||    
T  42298127 tttcccaatctcaccaatgaacaagacactc-atgatttttactctcccaaggtgtttacaattgtttcacaac 42298199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 47115187 - 47115115
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||| ||||||||| |||||| ||||    
T  47115187 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaagatgtttacaattgtttcccaac 47115115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 304
Target Start/End: Complemental strand, 41360930 - 41360872
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttac 304  Q
    |||| ||||||| |||||||||||||||||||||  |||||| ||||||||| |||||||    
T  41360930 tttcccaatctcaccaatgaacaagacactcaat-attttcactcacccaagatgtttac 41360872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 6808446 - 6808389
Alignment:
Q  261 atgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    ||||||||||||||||||  |||||| || ||||| |||||| | |||||||||||||    
T  6808446 atgaacaagacactcaataattttcactctcccaaagtgtttcccaatgtttctcaac 6808389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 31925867 - 31925919
Alignment:
Q  253 tctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 306  Q
    |||| |||||||||||||||||| ||| |||||| || ||||||||||||||||    
T  31925867 tctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaa 31925919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 249 - 318
Target Start/End: Complemental strand, 34603588 - 34603519
Alignment:
Q  249 tcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||||||| |||||||||||||||||||    |||||| |  |||||||||||||||| |||||| ||||    
T  34603588 tcaatctcaccaatgaacaagacactcatgaattttcactttcccaaggtgtttacaattgtttcccaac 34603519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 2e-35; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 10 - 177
Target Start/End: Complemental strand, 29346890 - 29346722
Alignment:
Q  10 gaagcaaaggtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggctta-gtcttatgacttagtcttcttct 108  Q
    |||||||||| |||||||||||||||  ||||||||||| |||||||||||||||||||    | |||||| |||| |||||  |||| |||||||||||    
T  29346890 gaagcaaaggcatgaagaaaaatgatgaaagtctctcctttctccctttggtactctctttgagggtaatgacttaagtctttggactaagtcttcttct 29346791  T
Q  109 atcttttccttaatgtttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttac 177  Q
    |||||||| ||| | ||| ||||||| |||||||||||||||||||| ||||| | |||||||||||||    
T  29346790 atcttttctttagtatttttatgtaccaagaacatcaattttaattgggttctcaactatcaattttac 29346722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 248 - 451
Target Start/End: Original strand, 30843387 - 30843602
Alignment:
Q  248 ctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa------------agagaaccctcat 335  Q
    ||||||||||||||||||||||| |||||||| |||| | ||| | |||||||||||||||||||||||||||||            |||||||||| ||    
T  30843387 ctcaatctctccaatgaacaagatactcaatgattttaactcatctaaggtgtttacaaatgtttctcaacccaagagaacctttcaagagaacccttat 30843486  T
Q  336 taatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaagtcttcctcaaaacatgaagaatgaagccttgtataaagtcc 435  Q
     || |||||| || | |||||||||||||||| |||||   | |||||||||||||||  |||||||||||||||||||||| | |||| || | |||||    
T  30843487 caaagactctaaatcctaaagttacctcctttgatttcttaagtttctctctcctgaacccttcctcaaaacatgaagaatggacccttatacagagtcc 30843586  T
Q  436 agatcccaagaaatcg 451  Q
    | ||||||||||||||    
T  30843587 aaatcccaagaaatcg 30843602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 30024884 - 30025025
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| || |||| |||| || |||||||| || || || ||| |    
T  30024884 tttctcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aacgtttttcaa-cctaagagaactctaatcaaagaccc 30024981  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||| | ||||||||||    
T  30024982 tcaaccctaaagttacctcctttgatttcccaagtttctctctc 30025025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 47674095 - 47674236
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||  |||||| |||||||| || || || |||      
T  47674095 tttctcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgttttccaaccc-aagagaactctaatcaaagacct 47674192  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||||| |||||||||||||| ||||||| | ||||||||||    
T  47674193 tcaaccttgaagttacctcctttgatttcccaagtttctctctc 47674236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 47676288 - 47676429
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| ||||||||||||||||||| || |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  47676288 tttctcaatctcaccaatgaacaagacactcattgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 47676385  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||| ||||||| ||||||| | ||||||||||    
T  47676386 tcaaccctaaagttatctcctttgatttcccaagtttctctctc 47676429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 250 - 388
Target Start/End: Complemental strand, 43864255 - 43864119
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| ||||||||  | || || ||| ||||||    
T  43864255 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactttaatcaaagaccctcaac 43864158  T
Q  350 cttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||||||||||||||| ||||||| | ||||||||||    
T  43864157 cctaaagttacctcctttgatttcccaagtttctctctc 43864119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 250 - 419
Target Start/End: Original strand, 36574672 - 36574839
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||||||||| |||||||||||| ||  |||||| ||||| |||||||||||||||||||  |||||| |||||||||||||| || |||  |||||    
T  36574672 caatctctccaataaacaagacactcgataattttcactcacctaaggtgtttacaaatgttttccaaccc-aagagaaccctcatcaaagaccgtcaac 36574770  T
Q  350 cttaaagttacctcctttaatttccccaatttctctctcctgaagtcttcctcaaaacatgaagaatgaa 419  Q
    | |||||||||||||||| ||||| | | |||||||||| |||| || |||| |||| ||||| ||||||    
T  36574771 cctaaagttacctcctttgatttctcaattttctctctcttgaaatc-tccttaaaaaatgaacaatgaa 36574839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 1113673 - 1113532
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| | |||||||||||||||||||| |||||| ||||||||| ||||||| |||||||| |||||| |||||||| || || || ||| |    
T  1113673 tttctcaatctcacaaatgaacaagacactcaatgattttcactcacccaagttgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 1113576  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| ||||||||| |||||| ||||||| | ||||||||||    
T  1113575 tcaaccctaaagttacttcctttgatttcccaagtttctctctc 1113532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 14069985 - 14070126
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||| | |||||| |||||||| || || || ||| |    
T  14069985 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgttacccaaccc-aagagaactctaatcaaagaccc 14070082  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    ||| || |||||||||||||||| ||||||| | ||||||||||    
T  14070083 tcagccctaaagttacctcctttgatttcccaagtttctctctc 14070126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 14380013 - 14380154
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||| | |||||| |||||||| || || || ||| |    
T  14380013 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgttacccaaccc-aagagaactctaatcaaagaccc 14380110  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    ||| || |||||||||||||||| ||||||| | ||||||||||    
T  14380111 tcagccctaaagttacctcctttgatttcccaagtttctctctc 14380154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 258 - 388
Target Start/End: Original strand, 4253694 - 4253823
Alignment:
Q  258 ccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagt 357  Q
    ||||||||||||| |||||||| |||||| ||||| |||||||||||||||||||  |||||| |||||||||||||  ||  || ||||||| ||||||    
T  4253694 ccaatgaacaagaaactcaatgattttcactcacctaaggtgtttacaaatgttttccaaccc-aagagaaccctcaccaaataccctcaaccctaaagt 4253792  T
Q  358 tacctcctttaatttccccaatttctctctc 388  Q
    |||||||||| ||||||| | ||||||||||    
T  4253793 tacctcctttgatttcccaagtttctctctc 4253823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 250 - 375
Target Start/End: Original strand, 4538697 - 4538820
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||| |||| |||||| |||||||  || || || ||||||||||    
T  4538697 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatttttcccaaccc-aagagaattctaatcaaagactctcaac 4538794  T
Q  350 cttaaagttacctcctttaatttccc 375  Q
    |||||| ||||||||||| |||||||    
T  4538795 cttaaaattacctcctttgatttccc 4538820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 31733121 - 31733262
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    ||||||| |||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  31733121 tttctcagtctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 31733218  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||  |||||||||||| ||| ||||| | | ||||||||||    
T  31733219 tcaactctaaagttacctcttttgatttctcaagtttctctctc 31733262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 36146560 - 36146751
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccca------------aagagaaccct 332  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||            |||| |||| |    
T  36146560 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaacccaagagaacctctcaagaaaaccat 36146659  T
Q  333 cattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaag-tcttcctcaaaacatgaagaatgaagcctt 424  Q
     || || ||| ||||||  |||||||||||||||| ||||||| | ||| |||||| ||||| |||||| ||||| |||||||||||||||||    
T  36146660 aatcaaagaccctcaacactaaagttacctcctttgatttcccaagtttttctctcttgaagctcttcc-caaaaaatgaagaatgaagcctt 36146751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 245 - 372
Target Start/End: Complemental strand, 48491595 - 48491470
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| |||||||| |||||| |||||||| || || || ||| |    
T  48491595 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaagtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 48491498  T
Q  345 tcaaccttaaagttacctcctttaattt 372  Q
    |||||| |||||||||||||||| ||||    
T  48491497 tcaaccctaaagttacctcctttgattt 48491470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 245 - 375
Target Start/End: Original strand, 38671374 - 38671502
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | |||||||||||||||||||| |||||  ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  38671374 tttcccaatctcacaaatgaacaagacactcaatgattttcgctcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 38671471  T
Q  345 tcaaccttaaagttacctcctttaatttccc 375  Q
    |||||| |||||||||||||||| |||||||    
T  38671472 tcaaccctaaagttacctcctttgatttccc 38671502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 250 - 387
Target Start/End: Complemental strand, 18126655 - 18126520
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| ||||||||||| |||||||||| |||||| ||||||||| ||||||| |||||||| |||||| | |||||| || || || ||| ||||||    
T  18126655 caatctcaccaatgaacaaaacactcaatgattttcactcacccaagttgtttac-aatgtttcccaaccc-atgagaactctaatcaaagaccctcaac 18126558  T
Q  350 cttaaagttacctcctttaatttccccaatttctctct 387  Q
    | |||||||||||||||| ||||||| | |||||||||    
T  18126557 cctaaagttacctcctttgatttcccaagtttctctct 18126520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 24526049 - 24526196
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| |||| || |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||| || ||||||||| | || || ||| |    
T  24526049 tttcccaatttcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaa-cctaagagaaccataatcaaagaccc 24526146  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctcctgaag 394  Q
    |||||| |||||||| ||||||| ||||||| | ||| |||||| |||||    
T  24526147 tcaaccctaaagttatctcctttgatttccctagtttttctctcttgaag 24526196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 245 - 385
Target Start/End: Complemental strand, 48489447 - 48489309
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| ||||||||||||||| | |||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || |||      
T  48489447 tttcccaatctcaccaatgaacaagacatttaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagacca 48489350  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctct 385  Q
    |||||| |||||||||||||||| ||||||| | |||||||    
T  48489349 tcaaccctaaagttacctcctttgatttcccaagtttctct 48489309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 4586177 - 4586036
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| ||| || ||||||||||||||||| |||||||| |||||| |||||||| || || || ||  |    
T  4586177 tttcccaatctcaccaatgaacaagacactcaatgatttacactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagagcc 4586080  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| ||||||||| |||||| ||||||| | ||| ||||||    
T  4586079 tcaaccctaaagttacatcctttgatttcccaagtttttctctc 4586036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 41317586 - 41317776
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa------------agagaaccct 332  Q
    |||| ||||||| ||||||||||||| |||||||| |||||| ||| ||||||||||||||| |||||| ||||||||            ||||||||||    
T  41317586 tttcccaatctcaccaatgaacaagagactcaatgattttcactcatccaaggtgtttacaa-tgtttcccaacccaagagaacccctcaagagaaccct 41317684  T
Q  333 cattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaag-tcttcctcaaaacatgaagaatgaagcctt 424  Q
     || || ||| ||||||| |||||||||||||||| ||||||| | |||||||||| ||||| |||| | ||||| |||||||||||||||||    
T  41317685 aatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctcttac-caaaaaatgaagaatgaagcctt 41317776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 251 - 375
Target Start/End: Complemental strand, 23343985 - 23343862
Alignment:
Q  251 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaacc 350  Q
    |||||| ||||||||| ||||| |||||| |||||| |||||||||||||||  ||||||||| ||| || ||||||||||| || || ||||||| |||    
T  23343985 aatctcaccaatgaactagacattcaatgattttcactcacccaaggtgttttgaaatgtttc-caaacctaagagaaccctaatcaaagactctcgacc 23343887  T
Q  351 ttaaagttacctcctttaatttccc 375  Q
     ||||||||| |||||| |||||||    
T  23343886 ctaaagttacatcctttgatttccc 23343862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 245 - 373
Target Start/End: Original strand, 31105545 - 31105671
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | |||||||||||||||||||| |||||| ||||||||||||||||| |||||||||| |||| |||| |||  | || || ||| |    
T  31105545 tttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttctc-accccaagataactataatcaaagaccc 31105642  T
Q  345 tcaaccttaaagttacctcctttaatttc 373  Q
    |||||| |||||||||||||||| |||||    
T  31105643 tcaaccctaaagttacctcctttgatttc 31105671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 12098011 - 12098201
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccca------------aagagaaccct 332  Q
    |||| ||||||  |||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||| |||||||            |||| ||||||    
T  12098011 tttcccaatctaaccaatgaacaagacactcaatgattttcactcacccaagatgtttac-aatgtttcccaacccaagagaacctctcaagaaaaccct 12098109  T
Q  333 cattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaag-tcttcctcaaaacatgaagaatgaagcctt 424  Q
     || || ||| ||||||| |||||||||||||||| ||||||| | ||| |||||| ||||| |||||| ||||| |||||||||||||||||    
T  12098110 aatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgaagctcttcc-caaaaaatgaagaatgaagcctt 12098201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 23555055 - 23554915
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||| | |||||||| || || || |||      
T  23555055 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaactc-aagagaactctaatcaaagacct 23554959  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| | |||||||||||||| ||||||| | ||||||||||    
T  23554958 tcaaccctgaagttacctcctttgatttcccaagtttctctctc 23554915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 24514913 - 24515053
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  24514913 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 24515009  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| ||||||| | |||||| ||||||| | ||||||||||    
T  24515010 taaaccctaaagttgcttcctttgatttcccaagtttctctctc 24515053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 29991070 - 29990930
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  29991070 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 29990974  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| |||||||  ||||||| ||||||| | ||||||||||    
T  29990973 taaaccctaaagttgtctcctttgatttcccaagtttctctctc 29990930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 245 - 373
Target Start/End: Complemental strand, 26417332 - 26417206
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| ||||||  | | |||||||||||| |||||||| ||| || |||||||| || || || ||| |    
T  26417332 tttcccaatctcaccaatgaacaagacactcaatgattttcacccgctcaaggtgtttac-aatgtttcccaatcc-aagagaactctaatcaaagaccc 26417235  T
Q  345 tcaaccttaaagttacctcctttaatttc 373  Q
    |||||| |||||||||||||||| |||||    
T  26417234 tcaaccctaaagttacctcctttgatttc 26417206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 18 - 165
Target Start/End: Complemental strand, 29367405 - 29367259
Alignment:
Q  18 ggtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggctta-gtcttatgacttagtcttcttctatcttttc 116  Q
    ||||||||||||| |||| ||||||| || |||||| ||||  ||||||||||| |||||||| |||| |||||| ||||||||||||||||||| ||      
T  29367405 ggtatgaagaaaagtgat-gaagtctatcatctctctctttaatactctctagtagagtaatgacttaagtcttaggacttagtcttcttctatccttct 29367307  T
Q  117 cttaatgtttctatgtacgaagaacatcaattttaattgagttctaatc 165  Q
    |||  | ||| ||||||| ||||| |||||||||| || ||||||||||    
T  29367306 ctttctcttt-tatgtaccaagaagatcaattttatttaagttctaatc 29367259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 2761454 - 2761595
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| |||||||| |||||||| |||||||| |||||| |||||||| || || ||  |       
T  2761454 tttcccaatctcaccaatgaacaagacactcgatgattttcactcacccaatgtgtttac-aatgtttcccaaccc-aagagaactctaatcaaatatca 2761551  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||| | ||| ||||||    
T  2761552 tcaaccctaaagttacctcctttgatttcccaagtttatctctc 2761595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 4178790 - 4178650
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  4178790 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 4178694  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| ||||||| | |||||| ||||| | | ||||||||||    
T  4178693 taaaccctaaagttgcttcctttgatttctcaagtttctctctc 4178650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 245 - 424
Target Start/End: Complemental strand, 8153358 - 8153169
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccca------------aagagaaccct 332  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| |||||||| |||||||            ||||| |||||    
T  8153358 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaatgtgtttac-aatgtttcccaacccaagagaacccctcaagaggaccct 8153260  T
Q  333 cattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaag-tcttcctcaaaacatgaagaatgaagcctt 424  Q
     || || ||| | |||||||||||||||||||||| |||| || | |||||||||| ||||| |||| ||||||| |||||||||||| ||||    
T  8153259 aatcaaagacccccaaccttaaagttacctcctttgattttcctagtttctctctcttgaagctctt-ctcaaaa-atgaagaatgaaacctt 8153169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 245 - 374
Target Start/End: Complemental strand, 31518811 - 31518684
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| |||||||||||||||||  ||||||  ||||||||| |||||| | || || ||| |    
T  31518811 tttcccaatctcaccaatgaacaagacactcgatgattttcactcacccaaggtgtttac-gatgttttccaacccaaa-agaaccataatcaaagaccc 31518714  T
Q  345 tcaaccttaaagttacctcctttaatttcc 374  Q
    | |||| |||||||| ||||||| ||||||    
T  31518713 ttaaccctaaagttatctcctttgatttcc 31518684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 250 - 375
Target Start/End: Original strand, 41649167 - 41649289
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| | |||||||||||||||||||| |||||| | ||||||||||||||| |||||||| |||||| |||||||| || || || ||| || |||    
T  41649167 caatctcacaaatgaacaagacactcaatgattttcacttacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaataaaagac-cttaac 41649263  T
Q  350 cttaaagttacctcctttaatttccc 375  Q
    | |||||||| ||||||| |||||||    
T  41649264 cctaaagttaactcctttgatttccc 41649289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 245 - 373
Target Start/End: Complemental strand, 19502193 - 19502068
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| ||| |||||||||||||||||| || ||| ||| ||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  19502193 tttcgcaatctcaccactgaacaagacactcaatgattctcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 19502097  T
Q  345 tcaaccttaaagttacctcctttaatttc 373  Q
    |||||| |||||||||||| ||| |||||    
T  19502096 tcaaccctaaagttacctcatttgatttc 19502068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 29292251 - 29292199
Alignment:
Q  156 agttctaatctatcaattttacctttcatttaacaatcaattcacaattatca 208  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  29292251 agttctaatctatcaattttacctttcacttaataatcaattcacaattatca 29292199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 245 - 375
Target Start/End: Original strand, 496135 - 496263
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | ||| ||||| ||||| |||| |||||| ||||||||||| ||||| |||||||| ||| || |||||||| || || || ||| |    
T  496135 tttcccaatctcacaaattaacaaaacactaaatgattttcactcacccaaggtttttac-aatgtttcccaatcc-aagagaactctaatcaaagaccc 496232  T
Q  345 tcaaccttaaagttacctcctttaatttccc 375  Q
    ||||||||||||||||||| ||| |||||||    
T  496233 tcaaccttaaagttacctcatttgatttccc 496263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 245 - 319
Target Start/End: Complemental strand, 27347833 - 27347760
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacc 319  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| |||||||| |||||    
T  27347833 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaatgtgtttac-aatgtttcccaacc 27347760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 249 - 322
Target Start/End: Original strand, 5514165 - 5514238
Alignment:
Q  249 tcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 322  Q
    |||||||||| ||||||||||| |||||||| |||||| ||| | ||||||||||||| |||||| ||||||||    
T  5514165 tcaatctctcaaatgaacaagaaactcaatgattttcactcatcgaaggtgtttacaagtgtttcccaacccaa 5514238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 245 - 322
Target Start/End: Complemental strand, 35853930 - 35853855
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 322  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  35853930 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 35853855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 245 - 322
Target Start/End: Complemental strand, 48408818 - 48408743
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 322  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  48408818 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 48408743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 266 - 374
Target Start/End: Complemental strand, 25615858 - 25615752
Alignment:
Q  266 caagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagttacctcct 365  Q
    |||||||||||||| |||||  ||||||||||||||||| |||||||  |||||| |||||||| || || || ||| || ||||||||||||| |||||    
T  25615858 caagacactcaatgattttctctcacccaaggtgtttac-aatgttttccaaccc-aagagaactctaatcaaagacccttaaccttaaagttaactcct 25615761  T
Q  366 ttaatttcc 374  Q
    || ||||||    
T  25615760 ttgatttcc 25615752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 245 - 318
Target Start/End: Original strand, 2361124 - 2361196
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| |||||| ||||    
T  2361124 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcccaac 2361196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 32471234 - 32471143
Alignment:
Q  20 tatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggctta-gtcttatgacttagtcttcttctatc 111  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||    ||||||||  |||| |||||   ||||||||||||||||||    
T  32471234 tatgaagaaaattgat-gaagtctctcctctctccctttggtactctccttgcgagtaataacttatgtctttgaacttagtcttcttctatc 32471143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 251 - 394
Target Start/End: Original strand, 23565222 - 23565359
Alignment:
Q  251 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatg-tttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    |||||| |||||||||||||||||  |||||   || |||||||||||||||||||||| ||||| ||||  ||||||| ||| || || ||| || |||    
T  23565222 aatctcaccaatgaacaagacacttcatgtt---cactcacccaaggtgtttacaaatgttttctaaacc--aagagaa-cctaatcaaagacccttaac 23565315  T
Q  350 cttaaagttacctcctttaatttccccaatttctctctcctgaag 394  Q
    | |||||||||||||||| || |||| | |||||||||| |||||    
T  23565316 c-taaagttacctcctttgatatcccaagtttctctctcttgaag 23565359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 22328568 - 22328622
Alignment:
Q  264 aacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||||||||||||||| ||||||||| | |||||||||||||| |||||| ||||    
T  22328568 aacaagacactcaatgattttcattccctcaaggtgtttacaattgtttcccaac 22328622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 318
Target Start/End: Original strand, 4508858 - 4508930
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| ||||| ||||||||||||| || |||||| || |||||||||||||||| |||||| ||||    
T  4508858 tttcccaatctcaccaatcaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 4508930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 306
Target Start/End: Original strand, 34310868 - 34310928
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 306  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || ||||||||||||||||    
T  34310868 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaa 34310928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 3756762 - 3756682
Alignment:
Q  128 tatgtacgaagaacatcaattttaattgagttctaatctatcaa-ttttacctttcatttaacaatcaattcacaattatc 207  Q
    ||||||| ||||||| ||| | ||||||| |||| ||||||||| |||||||||| |||||| ||||||||  ||||||||    
T  3756762 tatgtactaagaacaccaactctaattgaattctcatctatcaatttttacctttaatttaataatcaatttgcaattatc 3756682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 8359469 - 8359535
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgttt 312  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || | |||||||||||||| |||||    
T  8359469 tttcccaatctccccaatgaacaagacactc-atgattttcactctctcaaggtgtttacaattgttt 8359535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 25767124 - 25767170
Alignment:
Q  259 caatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 306  Q
    ||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  25767124 caatgaacaagacactcaatgattttcactca-ccaaggtgtttacaa 25767170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 3259011 - 3258938
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||||||||||||||||    |||||| |  |||||||||||||||| |||||| ||||    
T  3259011 tttcccaatctcaccaatgaacaagacactcatgaattttcactttcccaaggtgtttacaattgtttcccaac 3258938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 6431987 - 6431915
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||  |||||||||||||||||| ||| |||||| || ||||| |||||||||| |||||| ||||    
T  6431987 tttcccaatctaaccaatgaacaagacactc-atgattttcactctcccaatgtgtttacaattgtttcccaac 6431915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 2e-33; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 260 - 424
Target Start/End: Original strand, 52467521 - 52467683
Alignment:
Q  260 aatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagtta 359  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||| ||||||||||| || || ||| ||||||| |||| |||    
T  52467521 aatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaaccc-aagagaaccctaatcaaagaccctcaaccctaaaatta 52467619  T
Q  360 cctcctttaatttccccaatttctctctcctgaagtcttc-ctcaaaacatgaagaatgaagcctt 424  Q
    |||||||| ||| ||| | |||||||||| ||||| || | ||||||| |||||||||||||||||    
T  52467620 cctcctttgattaccctagtttctctctcttgaag-ctccactcaaaa-atgaagaatgaagcctt 52467683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 48143058 - 48142917
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  48143058 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 48142961  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||| | ||||||||||    
T  48142960 tcaaccctaaagttacctcctttgatttcccaagtttctctctc 48142917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 250 - 395
Target Start/End: Complemental strand, 24969123 - 24968979
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| |||| ||||||||| ||||||| |||||| |||||||||||||||||||||||||| |||||| |||||||| || || || |||  |||||    
T  24969123 caatctcaccaaagaacaagactctcaatgattttcactcacccaaggtgtttacaaatgtttcccaaccc-aagagaactctaatcaaagaccgtcaac 24969025  T
Q  350 cttaaagttacctcctttaatttccccaatttctctctcctgaagt 395  Q
    |||||||||||||||||| ||||||| | ||| |||||| ||||||    
T  24969024 cttaaagttacctcctttgatttcccaagtttttctctcttgaagt 24968979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 5429695 - 5429554
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  5429695 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 5429598  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| ||||||||| |||||| ||||||| | ||||||||||    
T  5429597 tcaaccctaaagttacttcctttgatttcccaagtttctctctc 5429554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 52082809 - 52082950
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| ||||||||||||||| |||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  52082809 tttcccaatctcaccaatgaacaagacagtcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 52082906  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||| | ||||||||||    
T  52082907 tcaaccctaaagttacctcctttgatttcccaagtttctctctc 52082950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 52095514 - 52095655
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || | | |    
T  52095514 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagtccc 52095611  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||| | ||||||||||    
T  52095612 tcaaccctaaagttacctcctttgatttcccaagtttctctctc 52095655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 54200058 - 54200199
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| |||||||| |||||| |||||||| || || || ||| |    
T  54200058 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaatgtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 54200155  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||  | ||||||||||    
T  54200156 tcaaccctaaagttacctcctttgatttcctaagtttctctctc 54200199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 250 - 388
Target Start/End: Original strand, 5207999 - 5208136
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||| |||||||||||||| |||| |||| |||||| |||||||||||||||||||||||||| ||| || |||||||||||||  || ||| | ||||    
T  5207999 caatcactccaatgaacaagtcactaaatgattttcactcacccaaggtgtttacaaatgtttcccaatcc-aagagaaccctcaccaaagacccgcaac 5208097  T
Q  350 cttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | || ||||||||||||| |||| || ||||||||||||    
T  5208098 cctatagttacctcctttgattttccaaatttctctctc 5208136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 12739702 - 12739843
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| ||| || ||||| ||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  12739702 tttcccaatctcaccaatgaacaagacactcaatgatttccactcacctaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 12739799  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||| | | ||||||||||    
T  12739800 tcaaccctaaagttacctcctttgatttctcaagtttctctctc 12739843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 12747908 - 12748049
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| ||| || ||||| ||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  12747908 tttcccaatctcaccaatgaacaagacactcaatgatttccactcacctaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 12748005  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||| | | ||||||||||    
T  12748006 tcaaccctaaagttacctcctttgatttctcaagtttctctctc 12748049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 26175788 - 26175929
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| || |||||  | || || ||| |    
T  26175788 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aacagaactttaatcaaagaccc 26175885  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||  |||||||||||||||| ||||||| | ||||||||||    
T  26175886 tcaactctaaagttacctcctttgatttcccaagtttctctctc 26175929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 29254510 - 29254369
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||| |||||||| ||  | || |||      
T  29254510 tttcccaatctcaccaatgaacaagacactcaatgattttcattcacccaatgtgtttac-aatgtttcccaaccc-aagagaactctactcaaagacct 29254413  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||| ||||||| ||||||| | ||||||||||    
T  29254412 tcaaccctaaagttatctcctttgatttcccaagtttctctctc 29254369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 250 - 377
Target Start/End: Original strand, 47038566 - 47038691
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||  |||||||| |||||| |||||||| || || || ||| ||||||    
T  47038566 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgttta-taatgtttcccaaccc-aagagaactctaatcaaagaccctcaac 47038663  T
Q  350 cttaaagttacctcctttaatttcccca 377  Q
    | |||||||| ||||||| |||||||||    
T  47038664 cctaaagttaactcctttgatttcccca 47038691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 245 - 429
Target Start/End: Complemental strand, 53345233 - 53345048
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    ||||||||||||||| || |||||||||||||||| |||||| ||||  || ||||| |||||| ||||||| ||||| |||||| ||||   |  | ||    
T  53345233 tttctcaatctctccgataaacaagacactcaatgattttcactcacttaaagtgttaacaaatttttctcaccccaa-gagaactctcaccgaaaattc 53345135  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctcctgaag--tcttcctcaaaacatgaagaatgaagccttgtata 429  Q
    ||||||||||||||||||| ||||||||| | ||||| | |||| |||||  ||| |||| ||||||||||||||||| ||| ||||    
T  53345134 tcaaccttaaagttacctcatttaatttctcaaatttttttctcttgaagcctctacctcgaaacatgaagaatgaagtcttatata 53345048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 56178789 - 56178929
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || || |||      
T  56178789 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagacct 56178885  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||| | ||||||||||    
T  56178886 tcaaccctaaagttacctcctttgatttcccaagtttctctctc 56178929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 245 - 387
Target Start/End: Original strand, 34570566 - 34570706
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||| ||||| | |||||||| |||||| |||||||| || || || ||| |    
T  34570566 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaagatgttttc-aatgtttcccaaccc-aagagaactctaatcaaagaccc 34570663  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctct 387  Q
    |||||| ||||| |||||||||| ||||||| | |||||||||    
T  34570664 tcaaccctaaagctacctcctttgatttcccaagtttctctct 34570706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 250 - 375
Target Start/End: Complemental strand, 5871831 - 5871708
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |  |||    
T  5871831 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagacccataac 5871734  T
Q  350 cttaaagttacctcctttaatttccc 375  Q
    | |||||||||||||||| |||||||    
T  5871733 cctaaagttacctcctttgatttccc 5871708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 23407669 - 23407744
Alignment:
Q  167 atcaattttacctttcatttaacaatcaattcacaattatcatttttattccattataaattttaggaatcattaca 243  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||    
T  23407669 atcaattttacctttcatttcacaatcaattcacaattatca-ttttattccattatcaattttaggaaccattaca 23407744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 245 - 375
Target Start/End: Original strand, 13009583 - 13009711
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  13009583 tttcacaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 13009680  T
Q  345 tcaaccttaaagttacctcctttaatttccc 375  Q
    | |||| |||||||||||| ||| |||||||    
T  13009681 ttaaccctaaagttacctcatttgatttccc 13009711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 245 - 367
Target Start/End: Original strand, 6542333 - 6542454
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcatt--aatgac 342  Q
    |||| ||||||| |||||||||||||||||||||  |||||| ||||||||||||||||| |||||||| |||||| ||||||| |||||||  || |||    
T  6542333 tttcccaatctccccaatgaacaagacactcaataattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaa-cctcattacaaagac 6542429  T
Q  343 tctcaaccttaaagttacctccttt 367  Q
     ||||||| ||||||||||||||||    
T  6542430 actcaaccctaaagttacctccttt 6542454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 251 - 388
Target Start/End: Original strand, 12745594 - 12745729
Alignment:
Q  251 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaacc 350  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||||||||||| | |||||| ||| || |||||||| || || || ||| ||||||     
T  12745594 aatctcgccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-attgtttcccaaacc-aagagaactctaatcaaagaccctcaact 12745691  T
Q  351 ttaaagttacctcctttaatttccccaatttctctctc 388  Q
     ||||||||||||||||  |||||| | ||||||||||    
T  12745692 ctaaagttacctccttttttttcccaagtttctctctc 12745729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 251 - 388
Target Start/End: Complemental strand, 37740635 - 37740501
Alignment:
Q  251 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaacc 350  Q
    |||||| ||||||||||||||||||| || |||||| ||||| ||||||||||||| |||||| |||||||| |||||| || || || ||| |||||||    
T  37740635 aatctcaccaatgaacaagacactcagtgattttcactcacc-aaggtgtttacaa-tgtttcccaacccaa-gagaactctaatcaaagaccctcaacc 37740539  T
Q  351 ttaaagttacctcctttaatttccccaatttctctctc 388  Q
     |||| ||||||||||| ||||||| | ||||||||||    
T  37740538 ctaaacttacctcctttgatttcccaagtttctctctc 37740501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 9927610 - 9927750
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||| |||||||||| || |||||| ||||| ||||||||||||| |||||| |||||||| ||||||  | || || ||| |    
T  9927610 tttcccaatctcaccaatgaataagacactcagtgattttcactcacc-aaggtgtttacaa-tgtttcccaacccaa-gagaactttaatcaaagaccc 9927706  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||| | ||||||||||    
T  9927707 tcaaccctaaagttacctcctttgatttcccaagtttctctctc 9927750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 45687335 - 45687525
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa------------agagaaccct 332  Q
    |||| ||||||| ||||||||||||||| ||||    ||||| ||||||||||||||||||| |||||| ||||||||            ||||||||||    
T  45687335 tttcccaatctcaccaatgaacaagacaatcaaaaaatttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaacccctcaagagaaccct 45687433  T
Q  333 cattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaagtcttcctcaaaacatgaagaatgaagcctt 424  Q
     || || ||| ||||||| |||||||||||||||| ||||||| | |||||||||| ||||| | |  |||||| |||||||||||||||||    
T  45687434 aatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagcccttttcaaaaaatgaagaatgaagcctt 45687525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 245 - 330
Target Start/End: Original strand, 48893794 - 48893879
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccc-aaagagaacc 330  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||  ||||| ||||||||||    
T  48893794 tttctcaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttccaaaccctaaagagaacc 48893879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 300 - 420
Target Start/End: Original strand, 21704034 - 21704154
Alignment:
Q  300 tttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaagtct-t 398  Q
    ||||||||||||||||||||||| |||||||||||  || |||| ||||||||||||||||||| ||| ||||| | | |||||||||| ||||| || |    
T  21704034 tttacaaatgtttctcaacccaa-gagaaccctcaccaaagactttcaaccttaaagttacctcatttgatttctcaagtttctctctcttgaagcctct 21704132  T
Q  399 cctcaaaacatgaagaatgaag 420  Q
     | ||||||||||| |||||||    
T  21704133 acacaaaacatgaaaaatgaag 21704154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 37229874 - 37229951
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 322  Q
    |||| ||||||| ||||||||||||||||||| || |||||| |||||||||||||||||||||||||  ||||||||    
T  37229874 tttcccaatctcaccaatgaacaagacactcattgattttcactcacccaaggtgtttacaaatgttttccaacccaa 37229951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 36994540 - 36994400
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||  |||  | |||||||| || || || ||| |    
T  36994540 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttgccaaatc-aagagaactctaatcaaagaccc 36994443  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    ||||||  ||||||||||||||| |||| || | ||||||||||    
T  36994442 tcaacc-aaaagttacctcctttgattttccaagtttctctctc 36994400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 263 - 424
Target Start/End: Complemental strand, 6677466 - 6677307
Alignment:
Q  263 gaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccc-tcattaatgactctcaaccttaaagttacc 361  Q
    |||||||| ||||||| | ||||| ||| |||| ||||||||||||||||| |||||||| |||||||| | |  || ||| ||||||| ||||||||||    
T  6677466 gaacaagagactcaat-tatttcactcatccaatgtgtttacaaatgtttcccaacccaa-gagaacccctgaacaaagacactcaaccctaaagttacc 6677369  T
Q  362 tcctttaatttccccaatttctctctcctgaagtcttcctcaaaacatgaagaatgaagcctt 424  Q
    |||||| ||  ||  ||||||||| || ||||| || | ||||||||||||||||||||||||    
T  6677368 tcctttgataccctaaatttctctttcttgaagcctac-tcaaaacatgaagaatgaagcctt 6677307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 245 - 306
Target Start/End: Complemental strand, 31474166 - 31474105
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 306  Q
    |||||||||||| |||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  31474166 tttctcaatctcaccaatgaacaagacactcaatgattttcactcacccaaagtgtttacaa 31474105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 245 - 306
Target Start/End: Complemental strand, 51337080 - 51337019
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 306  Q
    |||||||||||| |||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  51337080 tttctcaatctcaccaatgaacaggacactcaatgattttcactcacccaaggtgtttacaa 51337019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 29999958 - 30000098
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||| | |||||| ||| ||||||||||||| |||||||| ||| || |||||||| || || || ||| |    
T  29999958 tttcccaatctcaccaatgaacaagacactcaacgattttcactca-ccaaggtgtttac-aatgtttc-caaacccaagagaactctaatcaaagaccc 30000054  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| |||||||  ||||||| ||||||| | ||||||||||    
T  30000055 taaaccctaaagttgtctcctttgatttcccaagtttctctctc 30000098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 250 - 313
Target Start/End: Original strand, 55085521 - 55085584
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttc 313  Q
    ||||||| ||||||||||||||| |||||| |||||| ||||||||||||||||||| ||||||    
T  55085521 caatctcaccaatgaacaagacagtcaatgattttcactcacccaaggtgtttacaattgtttc 55085584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 293 - 429
Target Start/End: Original strand, 39593958 - 39594093
Alignment:
Q  293 caaggtgtttacaaatgtttctcaacccaaagagaacc-ctcattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcctg 391  Q
    ||||||||||||||||||||||| | || |||||||||  |||| || ||||| |||||||||||||||||| ||| ||||||| |  ||||||||  ||    
T  39593958 caaggtgtttacaaatgtttctccaacccaagagaacctatcatcaaagactcccaaccttaaagttacctcatttgatttcccaaggttctctct--tg 39594055  T
Q  392 aagtcttcctcaaaacatgaagaatgaagccttgtata 429  Q
    |||  |||   |||| ||||||||||||||||| ||||    
T  39594056 aagctttctaaaaaaaatgaagaatgaagccttatata 39594093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 29056374 - 29056301
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||||| ||||||||| |||||||||| |||| | ||||||||||||||| |||||||||| ||||    
T  29056374 tttcccaatctctctaatgaacaaaacactcaatgatttttactcacccaaggtgtttccaaatgtttcccaac 29056301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 245 - 306
Target Start/End: Original strand, 36463541 - 36463602
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 306  Q
    |||| ||||||| ||||||||||||||||||||||  ||||| |||||||||||||||||||    
T  36463541 tttcccaatctcaccaatgaacaagacactcaatgaatttcactcacccaaggtgtttacaa 36463602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 40632461 - 40632389
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| ||||||||||||||||||| || |||||| || |||||||||||||||| |||||||||||    
T  40632461 tttcccaatctcaccaatgaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttctcaac 40632389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 266 - 367
Target Start/End: Original strand, 48142551 - 48142651
Alignment:
Q  266 caagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagttacctcct 365  Q
    |||||||||||||| |||||| |||||| | ||||||| ||||||||| |||| | ||||||||||| || || |||  |||||| ||||||||||||||    
T  48142551 caagacactcaatgattttcactcacccgaagtgtttaaaaatgtttcccaactc-aagagaaccctaatcaaagaccatcaaccctaaagttacctcct 48142649  T
Q  366 tt 367  Q
    ||    
T  48142650 tt 48142651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 4587974 - 4587899
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccca 321  Q
    |||| |||| || |||||||||| ||||||||||| |||||| ||||||||||||||||| |||||||| |||||||    
T  4587974 tttcccaatttcaccaatgaacatgacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccca 4587899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 4578364 - 4578541
Alignment:
Q  18 ggtatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggctt-agtcttatgacttagtcttcttctatcttttc 116  Q
    |||||||| ||||||||| ||||||||||||||| | ||||||||||||||||| ||| ||| |||| ||||||| ||  ||||||||||  ||||||||    
T  4578364 ggtatgaaaaaaaatgat-gaagtctctcctctccctctttggtactctctagtagagcaatagcttaagtctta-gagatagtcttctttaatcttttc 4578461  T
Q  117 c-ttaatgtttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttacctttcatttaacaatcaatt 197  Q
    | ||  |  || ||| ||| | ||||| ||| |||||||| ||||| ||| ||||||||||  ||| |||||||||||||||    
T  4578462 catttctcatt-tatttactacgaacaccaactttaattgtgttctcatcaatcaatttta-ttttgatttaacaatcaatt 4578541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 5349905 - 5349845
Alignment:
Q  262 tgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaa 323  Q
    |||||||||||||||| | |||||| ||| |||||||||||||||||||||| |||||||||    
T  5349905 tgaacaagacactcaaagattttcaatcatccaaggtgtttacaaatgtttc-caacccaaa 5349845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 23406633 - 23406698
Alignment:
Q  20 tatgaagaaaaatgattgaagtctctcctctctccctttggtactctctagtcgagtaatggctta 85  Q
    ||||||||||||||||  |||||||||||||||| ||||||||||||||    |||||||||||||    
T  23406633 tatgaagaaaaatgatgaaagtctctcctctctctctttggtactctctttgagagtaatggctta 23406698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 23407625 - 23407678
Alignment:
Q  98 agtcttcttctatcttttccttaatgtttctatgtacgaagaacatcaatttta 151  Q
    ||||||||||||||||||| |||||  |||||||||| ||||||||||||||||    
T  23407625 agtcttcttctatcttttctttaatagttctatgtaccaagaacatcaatttta 23407678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 282 - 421
Target Start/End: Original strand, 37755112 - 37755251
Alignment:
Q  282 tttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaacc-ctcattaatgactctcaaccttaaagttacctcctttaatttccccaatt 380  Q
    ||||| ||||| ||||||||||||||| ||||  || |||| ||||||| ||||  || ||||||||| | |||||||||||||||| |||| || | ||    
T  37755112 tttcactcacctaaggtgtttacaaatatttcataatccaa-gagaacctctcaccaaagactctcaatcctaaagttacctcctttgattttccaagtt 37755210  T
Q  381 tctctctcctg-aagtcttcctcaaaacatgaagaatgaagc 421  Q
    |||||||| || || || | ||||||||||||||||||||||    
T  37755211 tctctctcttgaaactcat-ctcaaaacatgaagaatgaagc 37755251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 54883036 - 54882964
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| |||||| ||||    
T  54883036 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcccaac 54882964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 3913464 - 3913408
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtt 301  Q
    |||| ||||||| | |||||||||||||||||||| |||||| ||||||||||||||    
T  3913464 tttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtt 3913408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 250 - 388
Target Start/End: Original strand, 5370244 - 5370379
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| |||||||||||||||||||||| |||||| ||| |||| |||||||| |||||||| || ||| ||||||||  | || || ||| || |||    
T  5370244 caatctcaccaatgaacaagacactcaatgattttcactca-ccaaagtgtttac-aatgtttcccagccc-aagagaactataatcaaagaccctaaac 5370340  T
Q  350 cttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||||||  ||||||| ||||| | | ||||||||||    
T  5370341 cctaaagttgtctcctttgatttctcaagtttctctctc 5370379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 21688264 - 21688192
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||||||||||| || ||||||||||||||| ||| |||||| || ||||||||||||| || |||||| ||||    
T  21688264 tttctcaatctcaccgatgaacaagacactc-atgattttcactcccccaaggtgtttagaattgtttcccaac 21688192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 46703516 - 46703443
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||||||||||||||||    |||||| || |||||||||||||||| |||||| ||||    
T  46703516 tttcccaatctcaccaatgaacaagacactcatgaattttcactctcccaaggtgtttacaattgtttcccaac 46703443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 318
Target Start/End: Complemental strand, 12119549 - 12119481
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    ||||||| || |||||||||||||||| || |||||| || |||||||| ||||||| |||||| ||||    
T  12119549 caatctcacctatgaacaagacactcattgattttcactctcccaaggtatttacaattgtttcccaac 12119481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 43208285 - 43208344
Alignment:
Q  537 cccgatttttgtccaaccaaaactccaaaacttgcac-aaaatcgtgccccgatttctcc 595  Q
    ||||||||||||| || ||||||||||||  ||| || ||||||||||||||||||||||    
T  43208285 cccgatttttgtcaaatcaaaactccaaattttgaaccaaaatcgtgccccgatttctcc 43208344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 50673998 - 50674064
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgttt 312  Q
    |||||||||||| | |||||||| ||||||| ||| |||||| || |||||||||||||||| |||||    
T  50673998 tttctcaatctcacaaatgaacacgacactc-atgattttcactctcccaaggtgtttacaattgttt 50674064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 52093891 - 52093957
Alignment:
Q  322 aagagaaccctcattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||||| || || || ||| ||||||| |||||||||||||||| ||||||| | ||||||||||    
T  52093891 aagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctc 52093957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 245 - 306
Target Start/End: Complemental strand, 2209729 - 2209669
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 306  Q
    |||| |||||||  ||||||||||||||||| ||| |||||| || ||||||||||||||||    
T  2209729 tttcccaatctcaacaatgaacaagacactc-atgattttcactctcccaaggtgtttacaa 2209669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 249 - 318
Target Start/End: Complemental strand, 6655968 - 6655900
Alignment:
Q  249 tcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||||||| | | ||||||||||||||| || |||||| || |||||||||||||||| |||||| ||||    
T  6655968 tcaatctcacaagtgaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 6655900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 249 - 318
Target Start/End: Complemental strand, 35662453 - 35662384
Alignment:
Q  249 tcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||||||| |||||||||||||||||||   |||||||  | | |||||||||||||| |||||| ||||    
T  35662453 tcaatctcaccaatgaacaagacactcatgatttttcacactctcaaggtgtttacaattgtttcccaac 35662384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 49272623 - 49272660
Alignment:
Q  22 tgaagaaaaatgattgaagtctctcctctctccctttg 59  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  49272623 tgaagaaaaatgatgaaagtctctcctctctccctttg 49272660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 6e-30; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 5236608 - 5236749
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  5236608 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 5236705  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||  ||||||| | ||||||||||    
T  5236706 tcaaccctaaagttacctccttcgatttcccaagtttctctctc 5236749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 250 - 420
Target Start/End: Original strand, 9666624 - 9666792
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| | |||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||| |  ||||||||||| || || ||| ||||||    
T  9666624 caatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaa-ctgaagagaaccctaatcaaagaccctcaac 9666722  T
Q  350 cttaaagttacctcctttaatttccccaatttctctctcctgaagtcttcctcaaaacatgaagaatgaag 420  Q
    | |||||||||||| ||| ||||||| | | |||||||| |||||   | ||||||| |||||||||||||    
T  9666723 cctaaagttacctcatttgatttccctagtgtctctctcttgaagctctactcaaaa-atgaagaatgaag 9666792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 44700630 - 44700820
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccca------------aagagaaccct 332  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||            |||| ||||||    
T  44700630 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaacccaagagaacccctcaagataaccct 44700729  T
Q  333 cattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaag-tcttcctcaaaacatgaagaatgaagcctt 424  Q
     || || |||  |||||| |||||||||||||||| ||||||| | |||||||||| ||||| |||| ||||||| |||||||||||||||||    
T  44700730 aatcaaagaccatcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctctt-ctcaaaa-atgaagaatgaagcctt 44700820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 245 - 424
Target Start/End: Original strand, 29196539 - 29196729
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaaccca------------aagagaaccct 332  Q
    |||| ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||            |||| ||||||    
T  29196539 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaacccaagagaacctctcaagaaaaccct 29196638  T
Q  333 cattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaagtcttcctcaaaacatgaagaatgaagcctt 424  Q
     || || ||| ||||||| |||||||||||||||| ||||||| | ||| |||||| || || ||  ||||||| |||||||||||||||||    
T  29196639 aatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgtag-ctctctcaaaaaatgaagaatgaagcctt 29196729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 261 - 375
Target Start/End: Original strand, 39153529 - 39153641
Alignment:
Q  261 atgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagttac 360  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||| |||||||| || || || ||| ||||||| |||||||||    
T  39153529 atgaacaagacactcaatgattttcattcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccctcaaccctaaagttac 39153626  T
Q  361 ctcctttaatttccc 375  Q
    ||||||| |||||||    
T  39153627 ctcctttgatttccc 39153641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 245 - 372
Target Start/End: Complemental strand, 40734514 - 40734389
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  40734514 tttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 40734417  T
Q  345 tcaaccttaaagttacctcctttaattt 372  Q
    |||||| |||||||| ||||||| ||||    
T  40734416 tcaaccctaaagttatctcctttgattt 40734389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 250 - 388
Target Start/End: Original strand, 53921660 - 53921796
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||||| ||||| |||||||  |||||| |||| |||||| || || ||||||||||    
T  53921660 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtttttac-aatgttttccaaccc-aagaaaaccctaatcaaagactctcaac 53921757  T
Q  350 cttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||||||||||| ||| ||||||| | ||| ||||||    
T  53921758 cctaaagttacctcatttgatttcccaagtttttctctc 53921796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 245 - 424
Target Start/End: Complemental strand, 32891119 - 32890942
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| || | ||||||||||||||||| |||| | ||||||||||||||||| |||||||| | |||| ||||||||||| || || ||| |    
T  32891119 tttctcaatctcaccgaagaacaagacactcaatgatttttactcacccaaggtgtttac-aatgtttc-ccaccccaagagaaccctaatcaaagaccc 32891022  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctcctgaag-tcttcctcaaaacatgaagaatgaagcctt 424  Q
    |||||| |||||||||||||||| | || || |||||  ||||| ||||| |||| || |||| |||||||||||| ||||    
T  32891021 tcaaccctaaagttacctcctttgactttccaaattttcctctcttgaagctctttct-aaaaaatgaagaatgaaacctt 32890942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 7762281 - 7762141
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| |||||||| ||||||||||||| |||||| ||| |||||||||| || ||| |||| |||||| |||||||| || || || ||| |    
T  7762281 tttctcaatctcaccaatgaataagacactcaatgattttcactca-ccaaggtgttcac-aatatttcccaaccc-aagagaactctaatcaaagaccc 7762185  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||| | ||||||||||    
T  7762184 tcaaccctaaagttacctcctttgatttcccaagtttctctctc 7762141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 40735399 - 40735258
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||||||||||| |||||||||||||||||||||| |||||| |   ||||||||||||| ||||||||  ||||| ||||||||  | || || ||| |    
T  40735399 tttctcaatctcaccaatgaacaagacactcaatgattttcacttttccaaggtgtttac-aatgtttcctaaccc-aagagaactttaatcaaagaccc 40735302  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||| | ||||||||||    
T  40735301 tcaaccctaaagttacctcctttgatttcccaagtttctctctc 40735258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 250 - 388
Target Start/End: Complemental strand, 51398825 - 51398689
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    |||||||  ||||||||||||||||||||| |||||| ||| ||||||||||||| ||| |||| |||||| |||| ||| || || || ||||||||||    
T  51398825 caatctcatcaatgaacaagacactcaatgattttcactcatccaaggtgtttac-aatatttcccaaccc-aagaaaactctaatcaaagactctcaac 51398728  T
Q  350 cttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||||||||||||||| ||||||| | ||||| ||||    
T  51398727 cctaaagttacctcctttgatttcccaagtttctatctc 51398689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 245 - 393
Target Start/End: Complemental strand, 5373247 - 5373093
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcaccca-------aggtgtttacaaatgtttctcaacccaaagagaaccctcatta 337  Q
    |||| |||||||| ||||||||||||||||||||| |||||  |||||||       |||||||||| |||||||| |||||||| ||||||| |||  |    
T  5373247 tttcccaatctcttcaatgaacaagacactcaatgattttccctcacccacccaataaggtgtttaccaatgtttcccaacccaa-gagaaccttcacca 5373149  T
Q  338 atgactctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaa 393  Q
    | |||||||||||||||||||||||||||| ||||  | | |||||||||| ||||    
T  5373148 aagactctcaaccttaaagttacctcctttgatttttcaagtttctctctcttgaa 5373093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 251 - 375
Target Start/End: Complemental strand, 29810878 - 29810756
Alignment:
Q  251 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaacc 350  Q
    |||||| |||||||| |||||| |||||| |||||| ||||||||||||||||| |||||||| ||||||||| ||||| || || || ||| |||||||    
T  29810878 aatctcaccaatgaataagacattcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaaa-agaactctaatcaaagaccctcaacc 29810781  T
Q  351 ttaaagttacctcctttaatttccc 375  Q
     |||| ||||||||||| |||||||    
T  29810780 ctaaaattacctcctttgatttccc 29810756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 5260476 - 5260616
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| ||||||| |||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  5260476 tttcccaatctcaccaatgaccaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 5260572  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| ||||||| |||||||| ||||||| | ||||||||||    
T  5260573 taaaccctaaagttgcctcctttgatttcccaagtttctctctc 5260616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 9581284 - 9581171
Alignment:
Q  260 aatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagtta 359  Q
    |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| || |||| ||||||||    
T  9581284 aatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagacccttaaccctaaagtta 9581187  T
Q  360 cctcctttaatttccc 375  Q
     ||||||| |||||||    
T  9581186 actcctttgatttccc 9581171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 372
Target Start/End: Original strand, 22835154 - 22835279
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | |||||||||||||||||||| |||||| |||||||||||| |||| |||||||| |||| | |||||||| || || || ||| |    
T  22835154 tttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgattac-aatgtttcccaacac-aagagaactctaatcaaagaccc 22835251  T
Q  345 tcaaccttaaagttacctcctttaattt 372  Q
    |||||| |||||||||||||||| ||||    
T  22835252 tcaaccctaaagttacctcctttgattt 22835279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 45095180 - 45095040
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  45095180 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 45095084  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| ||||||| |||| ||| ||||||| | ||||||||||    
T  45095083 taaaccctaaagttgcctcttttgatttcccaagtttctctctc 45095040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 245 - 375
Target Start/End: Original strand, 19684041 - 19684169
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | ||||||||||||| |||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  19684041 tttcccaatctcacaaatgaacaagacattcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 19684138  T
Q  345 tcaaccttaaagttacctcctttaatttccc 375  Q
    | |||| |||||||| ||||||| |||||||    
T  19684139 ttaaccctaaagttaactcctttgatttccc 19684169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 245 - 429
Target Start/End: Original strand, 2075209 - 2075403
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa------------agagaaccct 332  Q
    |||| |||| || |||||||||||||||||||||| |||||| ||| | |||||||||| ||||||||| ||||||||            | ||||| ||    
T  2075209 tttcccaatatcaccaatgaacaagacactcaatgattttcactcagc-aaggtgtttataaatgtttcccaacccaagataacttctcaaaagaactct 2075307  T
Q  333 cattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaagtcttcctcaaaacatgaagaatgaagccttgtata 429  Q
     || || ||||||||||| ||||||||| || ||| ||||||| | |||||||||| ||||| ||  ||||||||||||||||||||||||| ||||    
T  2075308 aatcaaagactctcaaccctaaagttac-tcatttgatttcccaagtttctctctcttgaagcctcactcaaaacatgaagaatgaagccttatata 2075403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 253 - 388
Target Start/End: Complemental strand, 7764475 - 7764343
Alignment:
Q  253 tctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaacctt 352  Q
    |||| |||||||||||||||||||||| |||||| ||| ||||||||||||| ||||||||  ||||| |||||||  || || || ||| ||||||  |    
T  7764475 tctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcctaaccc-aagagaaatctaatcaaagaccctcaactct 7764379  T
Q  353 aaagttacctcctttaatttccccaatttctctctc 388  Q
    ||||||||||||||| ||||||| | ||||||||||    
T  7764378 aaagttacctcctttgatttcccaagtttctctctc 7764343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 44331555 - 44331485
Alignment:
Q  251 aatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 322  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  44331555 aatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 44331485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 245 - 375
Target Start/End: Complemental strand, 760863 - 760735
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | |||||||||||||||||||| |||||| ||| ||||||||||||  |||||||| |||||| |||||||| || || || ||| |    
T  760863 tttcccaatctcacaaatgaacaagacactcaatgattttcactcatccaaggtgttta-taatgtttcccaaccc-aagagaactctaatcaaagaccc 760766  T
Q  345 tcaaccttaaagttacctcctttaatttccc 375  Q
    | |||| |||||||| ||||||| |||||||    
T  760765 ttaaccctaaagttaactcctttgatttccc 760735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 245 - 375
Target Start/End: Complemental strand, 16499046 - 16498918
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | |||||||||||||||||||| |||||| |  |||||||||||||| |||||||||||| || |||||||| || || || ||| |    
T  16499046 tttcccaatctcacaaatgaacaagacactcaatgattttcactaccccaaggtgtttac-aatgtttctcaa-cctaagagaactctaatcaaagaccc 16498949  T
Q  345 tcaaccttaaagttacctcctttaatttccc 375  Q
    ||||||   |||||||||||||| |||||||    
T  16498948 tcaacccacaagttacctcctttgatttccc 16498918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 245 - 375
Target Start/End: Original strand, 26386633 - 26386761
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | |||||||||||||||||||| |||||| |||||||| || |||||   |||||| ||| || |||||||| || || || |||||    
T  26386633 tttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaagtatttac-cctgtttcccaa-cctaagagaactctaatcaaagactc 26386730  T
Q  345 tcaaccttaaagttacctcctttaatttccc 375  Q
    |||||| |||||||||||||||| |||||||    
T  26386731 tcaaccctaaagttacctcctttgatttccc 26386761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 245 - 375
Target Start/End: Complemental strand, 29682375 - 29682247
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | ||| |||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  29682375 tttcccaatctcacaaataaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 29682278  T
Q  345 tcaaccttaaagttacctcctttaatttccc 375  Q
    | |||| |||| ||| ||||||| |||||||    
T  29682277 ttaaccctaaatttaactcctttgatttccc 29682247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 250 - 388
Target Start/End: Complemental strand, 29813074 - 29812938
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| ||||| |||||| | ||||||| |||||| |||||||| |||||||||| || ||| |||||||| ||||||  | || || ||| ||||||    
T  29813074 caatctcaccaattaacaagcccctcaatgattttcactcacccaatgtgtttacaa-tgcttcccaacccaa-gagaactttaatcaaagaccctcaac 29812977  T
Q  350 cttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||||||||||||||| ||||||| | ||||||||||    
T  29812976 cctaaagttacctcctttgatttcccaagtttctctctc 29812938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 245 - 331
Target Start/End: Complemental strand, 31314461 - 31314377
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccc 331  Q
    |||||||||||| || ||||||||||||||||||| |||||| |||||||| |||||||| |||||||| |||||| ||||||||||    
T  31314461 tttctcaatctcacctatgaacaagacactcaatgattttcactcacccaaagtgtttac-aatgtttcccaaccc-aagagaaccc 31314377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 5258297 - 5258437
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  5258297 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 5258393  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| ||||||| |  ||||| ||||| | | ||||||||||    
T  5258394 taaaccctaaagtttctccctttgatttctcaagtttctctctc 5258437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 37408474 - 37408334
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||||||||||||||||  |||||| ||| | ||||||||||| |||||||| |||||| |||||||| || || || |||      
T  37408474 tttcccaatctcaccaatgaacaagacactcaataattttcactca-ctaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagacca 37408378  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| ||||||| |||||||| ||||||| | ||||||||||    
T  37408377 taaaccctaaagttgcctcctttgatttcccaagtttctctctc 37408334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 46860490 - 46860416
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatg-tttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||||||||||| ||||||||||||||||||| ||  |||||| || |||||||||||||||| |||||||||||    
T  46860490 tttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttctcaac 46860416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 250 - 318
Target Start/End: Original strand, 5434035 - 5434102
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||||| |||||| ||||    
T  5434035 caatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttacaattgtttcccaac 5434102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 249 - 393
Target Start/End: Original strand, 8166612 - 8166757
Alignment:
Q  249 tcaatctctccaatgaacaagacac--tcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaacc-ctcattaatgactct 345  Q
    ||||||||| | |||||||||||||  |||||| ||||||  ||||||| |||||||||||||||| ||||| | |||||||||  |||  ||  || ||    
T  8166612 tcaatctcttccatgaacaagacacactcaatgattttcacccacccaatgtgtttacaaatgtttttcaactc-aagagaacctttcaagaa-aaccct 8166709  T
Q  346 caaccttaaagttacctcctttaatttccccaatttctctctcctgaa 393  Q
    ||||| |||||||||||| ||| ||||||| |||||||||||| ||||    
T  8166710 caaccctaaagttacctcattttatttcccaaatttctctctcttgaa 8166757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 4569968 - 4569901
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgttt 312  Q
    |||| ||||||| |||| |||||| |||||||||| |||||| ||||||||||||||||||| |||||    
T  4569968 tttcccaatctcaccaaagaacaaaacactcaatgattttcactcacccaaggtgtttacaattgttt 4569901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 272 - 394
Target Start/End: Original strand, 32744606 - 32744725
Alignment:
Q  272 actcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaaagttacctcctttaatt 371  Q
    |||||||| |||||| ||||| || |||||||||| |||||| |||||||| |||||| || || || ||| ||||||| |||||||||||||||| |||    
T  32744606 actcaatgattttcactcacc-aatgtgtttacaa-tgtttcccaacccaa-gagaactctaatcaaagaccctcaaccctaaagttacctcctttgatt 32744702  T
Q  372 tccccaatttctctctcctgaag 394  Q
    |||| | ||| |||||| |||||    
T  32744703 tcccaagtttttctctcttgaag 32744725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 23392061 - 23392137
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 322  Q
    |||| ||| ||| |||||||| |||||||| |||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  23392061 tttcccaaactcaccaatgaaaaagacactaaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaa 23392137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 32756569 - 32756502
Alignment:
Q  38 aagtctctcctctctccctttggtactctctagtcgagtaatggcttagtcttatgacttagtcttcttc 107  Q
    ||||||||||||||||||||||||||||| | || ||||||||||| ||||||| ||||| |||||||||    
T  32756569 aagtctctcctctctccctttggtactct-tggtagagtaatggctaagtctta-gacttggtcttcttc 32756502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 54593720 - 54593648
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| |||||| ||||    
T  54593720 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcccaac 54593648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 250 - 388
Target Start/End: Original strand, 9636284 - 9636420
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa-agagaaccctcattaatgactctcaa 348  Q
    ||||||| ||||||| |||||||||||||| |||||| ||| ||||||||||||| ||| |||| |||||||| |||| || || || || ||| || ||    
T  9636284 caatctcaccaatgaccaagacactcaatgattttcactca-ccaaggtgtttac-aatatttcccaacccaagagag-actctaatcaaagaccctaaa 9636380  T
Q  349 ccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    || ||||||| | |||||| ||||||| | ||||||||||    
T  9636381 ccctaaagtttcttcctttgatttcccaagtttctctctc 9636420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 260 - 306
Target Start/End: Original strand, 23410496 - 23410542
Alignment:
Q  260 aatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 306  Q
    |||||||||||||||||||| |||||| |||| ||||||||||||||    
T  23410496 aatgaacaagacactcaatgattttcactcactcaaggtgtttacaa 23410542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 519 - 641
Target Start/End: Original strand, 37761896 - 37762018
Alignment:
Q  519 gatttctacaaaacgtaccccgatttttgtccaaccaaaactccaaaacttgcacaaaatcgtgccccgatttctcctaatcgtatcacgatttttacct 618  Q
    |||||||||||| | | | ||| |||||||| ||||||||||| |||| ||||| ||||| || || | | |||| | ||| ||  |||||||||| |      
T  37761896 gatttctacaaatcatgctccggtttttgtcgaaccaaaactcaaaaatttgcataaaattgtacctcaacttcttcaaattgtgccacgatttttgctg 37761995  T
Q  619 aatctcattcatcaattttgagt 641  Q
    |||||||||||||||||||||||    
T  37761996 aatctcattcatcaattttgagt 37762018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 46506041 - 46506095
Alignment:
Q  36 tgaagtctctcctctctccctttggtactctctagtcgagtaatggcttagtctt 90  Q
    ||||||||||||||||| |||| ||||||| ||||| |||||||| |||||||||    
T  46506041 tgaagtctctcctctcttccttgggtactccctagtagagtaatgacttagtctt 46506095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 46506083 - 46506171
Alignment:
Q  91 atgacttagtcttcttctatcttttccttaatgtttctatgtacgaagaacatcaattttaattgagttctaatctatcaattttaccttt 181  Q
    |||||||||||||||| ||||||| ||||  | |||| ||||||  ||||||| | |||||||||| ||||||||||||||||||| ||||    
T  46506083 atgacttagtcttcttgtatcttt-cctttctctttc-atgtacttagaacataagttttaattgatttctaatctatcaattttatcttt 46506171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 318
Target Start/End: Original strand, 6095751 - 6095823
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||||| |||||||||| || |||||| || |||||||||||||||| |||||| ||||    
T  6095751 tttcccaatctcaccaatgaataagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 6095823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 23198091 - 23198165
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 322  Q
    |||| ||||||| |||| ||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  23198091 tttcccaatctcaccaa-gaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 23198165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 23200290 - 23200364
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaa 322  Q
    |||| ||||||| |||| ||||||||||||||||| |||||| ||| ||||||||||||| |||||||| ||||||||    
T  23200290 tttcccaatctcaccaa-gaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaacccaa 23200364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 318
Target Start/End: Original strand, 31340353 - 31340425
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| ||||||||||| ||||||| || |||||| || |||||||||||||||| |||||| ||||    
T  31340353 tttcccaatctcaccaatgaacaaaacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 31340425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 306
Target Start/End: Original strand, 43401954 - 43402014
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 306  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || ||||||||||||||||    
T  43401954 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaa 43402014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 318
Target Start/End: Original strand, 43403897 - 43403969
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||||||||||||||||| ||| |||||| || ||||| |||||||||| |||||| ||||    
T  43403897 tttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaaagtgtttacaattgtttcccaac 43403969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 46173369 - 46173315
Alignment:
Q  258 ccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttc 313  Q
    ||||||||||||||||||| || |||||| || |||||||||||||||| ||||||    
T  46173369 ccaatgaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttc 46173315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 35138857 - 35138915
Alignment:
Q  245 tttctcaatctctc-caatgaacaagacactcaatgtttttcattcacccaaggtgttt 302  Q
    |||||||||||||  | ||||||||||||||||||| |||||| || ||||||||||||    
T  35138857 tttctcaatctctttccatgaacaagacactcaatgattttcactctcccaaggtgttt 35138915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 255 - 373
Target Start/End: Original strand, 54739941 - 54740056
Alignment:
Q  255 tctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaaccttaa 354  Q
    ||||||||||| |||||| |||||| | |||| | | |||| |||||| |||||||| | |||| |||| |||||| |||  || |||| |||||| |||    
T  54739941 tctccaatgaataagacattcaatgatattcacttatccaatgtgtttgcaaatgttcc-caacacaaa-agaacc-tcaccaaagactttcaaccctaa 54740037  T
Q  355 agttacctcctttaatttc 373  Q
    |||||||||||||||||||    
T  54740038 agttacctcctttaatttc 54740056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 30236141 - 30236069
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| |||||||  |||||||||||||||||| || |||||| |  |||||||||||||||| |||||| ||||    
T  30236141 tttcccaatctcatcaatgaacaagacactca-tgattttcactatcccaaggtgtttacaattgtttcccaac 30236069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 245 - 306
Target Start/End: Original strand, 41819675 - 41819736
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 306  Q
    |||| ||||||| |||||||||||||||||||    |||||| || ||||||||||||||||    
T  41819675 tttcccaatctcaccaatgaacaagacactcatgaattttcactctcccaaggtgtttacaa 41819736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 245 - 318
Target Start/End: Original strand, 49199622 - 49199694
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaac 318  Q
    |||| ||||||| |||| ||||||||||||| ||| |||||| || ||||| |||||||||| |||||| ||||    
T  49199622 tttcccaatctcaccaacgaacaagacactc-atgattttcactctcccaaagtgtttacaattgtttcccaac 49199694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 519 - 653
Target Start/End: Original strand, 27909 - 28043
Alignment:
Q  519 gatttctacaaaacgtaccccgatttttgtccaaccaaaactccaaaacttgcacaaaatcgtgccccgatttctcctaatcgtatcacgatttttacct 618  Q
    |||||| ||||| ||| |||||||||||||||| | |||||||||||||||||||||||| |||| ||||||||||| |||| |  || ||||||| ||     
T  27909 gatttcaacaaatcgtgccccgatttttgtccagctaaaactccaaaacttgcacaaaattgtgctccgatttctccaaatcatgccatgatttttgccg 28008  T
Q  619 aatctcattcatcaattttgagtcaattcccaaca 653  Q
    ||||||||||||||||||| ||||| ||| |||||    
T  28009 aatctcattcatcaattttaagtcatttctcaaca 28043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 326 - 430
Target Start/End: Original strand, 27688 - 27792
Alignment:
Q  326 gaaccctcattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctcctgaagtcttcctcaaaacatgaagaatgaagccttg 425  Q
    ||||||||| ||| ||||||||  ||| |||||||||||||| ||||||| | ||| || ||| ||||| ||  |  ||||||||||||||||| ||||     
T  27688 gaaccctcactaaagactctcattcttgaagttacctcctttgatttcccaagtttttcgctcttgaagcctcacaaaaaacatgaagaatgaatcctta 27787  T
Q  426 tataa 430  Q
    |||||    
T  27788 tataa 27792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 20567 - 20708
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||||||| || | |||||||| |||||| ||||||||||||||||| ||||| || |||||| |||| ||| || || || ||| |    
T  20567 tttcccaatctcaccaatgaataataaactcaatgattttcactcacccaaggtgtttac-aatgtctcccaaccc-aagataactctaatcaaagaccc 20664  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    |||||| |||||||||||||||| ||||||  | ||||||||||    
T  20665 tcaaccctaaagttacctcctttgatttccaaagtttctctctc 20708  T

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Target: scaffold0006 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 245 - 375
Target Start/End: Original strand, 149249 - 149377
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| | |||||||||||||||||||| |||||| |  |||||||||||||| |||||||||||| || |||||||| || || || ||| |    
T  149249 tttcccaatctcacaaatgaacaagacactcaatgattttcactaccccaaggtgtttac-aatgtttctcaa-cctaagagaactctaatcaaagaccc 149346  T
Q  345 tcaaccttaaagttacctcctttaatttccc 375  Q
    ||||||   |||||||||||||| |||||||    
T  149347 tcaacccacaagttacctcctttgatttccc 149377  T

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Target: scaffold0016 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 245 - 331
Target Start/End: Complemental strand, 114618 - 114535
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccc 331  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||| ||||||||||    
T  114618 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaaccc 114535  T

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Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 114531 - 114465
Alignment:
Q  322 aagagaaccctcattaatgactctcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    ||||||||||| || || ||| ||||||| |||||||||||||||| ||||| | | ||||||||||    
T  114531 aagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 114465  T

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Target: scaffold1519 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 245 - 388
Target Start/End: Complemental strand, 931 - 792
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactc 344  Q
    |||| ||||||| |||| ||||||||||||||||| |||||| ||| ||||||||||||| |||||||| |||||| |||||||| || || || ||| |    
T  931 tttcccaatctcaccaa-gaacaagacactcaatgattttcactca-ccaaggtgtttac-aatgtttcccaaccc-aagagaactctaatcaaagaccc 836  T
Q  345 tcaaccttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | |||| ||||||| |  ||||| ||||||| | ||||||||||    
T  835 taaaccctaaagttgctgcctttgatttcccaagtttctctctc 792  T

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Target: scaffold0002 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 250 - 388
Target Start/End: Complemental strand, 434543 - 434408
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctcaac 349  Q
    ||||||| |||||||||||||||||||||| |||||| ||| ||||||| |||||  ||||||  |||||| |||||||| || || || ||| || |||    
T  434543 caatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtatttac-catgttttccaaccc-aagagaactctaatcaaagaccctaaac 434447  T
Q  350 cttaaagttacctcctttaatttccccaatttctctctc 388  Q
    | ||||||| | |||||| ||||||| | ||||||||||    
T  434446 cctaaagttgcttcctttgatttcccaagtttctctctc 434408  T

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Target: scaffold0286 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 245 - 306
Target Start/End: Complemental strand, 11573 - 11513
Alignment:
Q  245 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaa 306  Q
    |||| ||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  11573 tttcccaatctcaccaatgaacaagacactcaatgattttcactca-ccaaggtgtttacaa 11513  T

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Target: scaffold0129 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 271 - 347
Target Start/End: Original strand, 19117 - 19191
Alignment:
Q  271 cactcaatgtttttcattcacccaaggtgtttacaaatgtttctcaacccaaagagaaccctcattaatgactctca 347  Q
    ||||||||| |||||| ||||||||| |||||||||||||||| |||||| |||||||||||||  || ||||||||    
T  19117 cactcaatgattttcactcacccaag-tgtttacaaatgtttcccaaccc-aagagaaccctcaccaaagactctca 19191  T

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Target: scaffold0466 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 250 - 313
Target Start/End: Complemental strand, 7338 - 7276
Alignment:
Q  250 caatctctccaatgaacaagacactcaatgtttttcattcacccaaggtgtttacaaatgtttc 313  Q
    ||||||| |||||||||||||||||| ||| |||||| || |||||||||||||||| ||||||    
T  7338 caatctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttc 7276  T

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Target: scaffold0027 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 172
Target Start/End: Complemental strand, 16548 - 16415
Alignment:
Q  36 tgaagtctctcctctctccctttggtactctctagtcgagtaatggcttagtcttatgacttagtcttcttctatcttttccttaatgtttctatgtacg 135  Q
    ||||||| || ||||||||||||| || |||||||| || ||||| |||||||||| ||||||    |||||||||||||||||  |  ||  ||||||     
T  16548 tgaagtcactactctctccctttgatattctctagtagactaatgacttagtcttaggactta---atcttctatcttttcctttcttctttcatgtact 16452  T
Q  136 aagaacatcaattttaattgagttctaatctatcaat 172  Q
    ||||||| ||| | ||||||  |||| ||||||||||    
T  16451 aagaacaccaactctaattggattctcatctatcaat 16415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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