View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14236_low_16 (Length: 497)

Name: NF14236_low_16
Description: NF14236
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14236_low_16
NF14236_low_16
[»] chr8 (58 HSPs)
chr8 (100-425)||(6805601-6805946)
chr8 (73-312)||(25837635-25837871)
chr8 (72-312)||(18297835-18298072)
chr8 (73-312)||(37392657-37392893)
chr8 (73-312)||(38363805-38364041)
chr8 (73-289)||(3049733-3049946)
chr8 (73-293)||(38132868-38133085)
chr8 (73-312)||(16313618-16313854)
chr8 (73-312)||(35818535-35818771)
chr8 (73-312)||(12710369-12710605)
chr8 (68-293)||(7930958-7931180)
chr8 (73-273)||(26061868-26062065)
chr8 (172-303)||(7317196-7317326)
chr8 (78-273)||(10896366-10896558)
chr8 (78-153)||(41432468-41432543)
chr8 (78-312)||(42755596-42755827)
chr8 (78-304)||(5020612-5020833)
chr8 (73-293)||(18726750-18726967)
chr8 (65-293)||(26602067-26602292)
chr8 (68-273)||(32661084-32661286)
chr8 (176-314)||(29421598-29421736)
chr8 (78-299)||(21137257-21137472)
chr8 (73-248)||(31117699-31117873)
chr8 (172-273)||(41228864-41228965)
chr8 (78-250)||(40197226-40197395)
chr8 (73-147)||(34672085-34672161)
chr8 (73-290)||(33444757-33444969)
chr8 (73-153)||(43872232-43872312)
chr8 (172-283)||(35394210-35394321)
chr8 (87-312)||(1554465-1554688)
chr8 (172-289)||(19160875-19160992)
chr8 (69-153)||(37982054-37982138)
chr8 (73-149)||(25899383-25899459)
chr8 (73-153)||(15226690-15226770)
chr8 (306-341)||(26602003-26602038)
chr8 (73-152)||(33533660-33533739)
chr8 (68-231)||(16219134-16219293)
chr8 (309-342)||(41432714-41432747)
chr8 (309-341)||(1554419-1554451)
chr8 (309-341)||(3049983-3050015)
chr8 (309-341)||(7317347-7317379)
chr8 (309-341)||(16313572-16313604)
chr8 (309-341)||(18298086-18298118)
chr8 (309-341)||(18726684-18726716)
chr8 (309-341)||(21137197-21137229)
chr8 (309-341)||(35394364-35394396)
chr8 (309-341)||(35818489-35818521)
chr8 (309-341)||(38364055-38364087)
chr8 (311-342)||(15226940-15226971)
chr8 (70-149)||(37124070-37124149)
chr8 (173-314)||(12649957-12650097)
chr8 (308-341)||(12710618-12710651)
chr8 (308-341)||(26062117-26062150)
chr8 (308-341)||(38132802-38132835)
chr8 (309-341)||(16219008-16219040)
chr8 (73-137)||(19161024-19161088)
chr8 (309-341)||(25837885-25837917)
chr8 (310-342)||(29421553-29421585)
[»] chr3 (66 HSPs)
chr3 (72-283)||(26849286-26849493)
chr3 (68-312)||(8476419-8476660)
chr3 (68-309)||(53165839-53166076)
chr3 (78-295)||(43132285-43132498)
chr3 (73-312)||(1098923-1099158)
chr3 (73-309)||(24574291-24574524)
chr3 (73-293)||(6231631-6231848)
chr3 (73-312)||(11239231-11239467)
chr3 (73-312)||(33218024-33218260)
chr3 (67-293)||(44952026-44952249)
chr3 (78-292)||(47114988-47115199)
chr3 (73-304)||(46359676-46359904)
chr3 (172-312)||(19532964-19533104)
chr3 (68-312)||(26848741-26848982)
chr3 (68-292)||(20414596-20414817)
chr3 (78-273)||(31611135-31611327)
chr3 (73-273)||(20297517-20297714)
chr3 (73-293)||(48339887-48340104)
chr3 (73-312)||(40907990-40908225)
chr3 (73-312)||(10822829-10823064)
chr3 (78-293)||(28124566-28124778)
chr3 (73-314)||(9320557-9320796)
chr3 (69-293)||(29512320-29512540)
chr3 (72-289)||(12228390-12228602)
chr3 (73-137)||(31267630-31267694)
chr3 (73-153)||(32070994-32071074)
chr3 (172-308)||(32071266-32071401)
chr3 (78-149)||(6927820-6927891)
chr3 (78-153)||(49216029-49216104)
chr3 (76-160)||(38140628-38140712)
chr3 (71-312)||(31436034-31436271)
chr3 (78-153)||(43719192-43719267)
chr3 (73-304)||(28770329-28770556)
chr3 (309-344)||(1246964-1246999)
chr3 (78-137)||(18460582-18460641)
chr3 (306-341)||(24574546-24574581)
chr3 (306-341)||(31435988-31436023)
chr3 (306-341)||(33647768-33647803)
chr3 (78-149)||(33650285-33650356)
chr3 (309-344)||(53165787-53165822)
chr3 (238-304)||(2565578-2565644)
chr3 (309-343)||(9320511-9320545)
chr3 (64-153)||(6832189-6832278)
chr3 (78-111)||(13642828-13642861)
chr3 (309-341)||(6231566-6231598)
chr3 (309-341)||(6832021-6832053)
chr3 (309-341)||(12931006-12931038)
chr3 (309-341)||(26848996-26849028)
chr3 (309-341)||(31611050-31611082)
chr3 (309-341)||(40908239-40908271)
chr3 (309-341)||(46359926-46359958)
chr3 (309-341)||(47114922-47114954)
chr3 (310-341)||(18460914-18460945)
chr3 (78-149)||(24783938-24784009)
chr3 (244-303)||(40584502-40584561)
chr3 (308-338)||(24784180-24784210)
chr3 (73-115)||(27822995-27823037)
chr3 (311-341)||(32071420-32071450)
chr3 (308-341)||(1099171-1099204)
chr3 (309-342)||(39932589-39932622)
chr3 (308-341)||(44952281-44952314)
chr3 (308-341)||(48339822-48339855)
chr3 (244-304)||(12931059-12931119)
chr3 (89-153)||(27093769-27093833)
chr3 (309-341)||(28124501-28124533)
chr3 (172-208)||(43719141-43719177)
[»] chr2 (79 HSPs)
chr2 (73-312)||(20426594-20426829)
chr2 (78-292)||(3902186-3902396)
chr2 (78-312)||(28311808-28312038)
chr2 (78-312)||(37233159-37233389)
chr2 (68-312)||(6171510-6171751)
chr2 (78-312)||(21737519-21737750)
chr2 (67-312)||(346456-346698)
chr2 (73-312)||(4559283-4559519)
chr2 (78-293)||(9733976-9734188)
chr2 (73-312)||(14777609-14777845)
chr2 (73-312)||(41729241-41729477)
chr2 (73-292)||(7007309-7007524)
chr2 (78-312)||(26309996-26310227)
chr2 (68-312)||(11071324-11071565)
chr2 (73-312)||(2050590-2050826)
chr2 (78-293)||(13760696-13760908)
chr2 (172-312)||(39995250-39995391)
chr2 (73-273)||(17965707-17965904)
chr2 (73-312)||(5770221-5770457)
chr2 (73-312)||(37192246-37192482)
chr2 (73-312)||(42674772-42675008)
chr2 (79-314)||(27358072-27358303)
chr2 (79-314)||(45408981-45409212)
chr2 (73-273)||(638318-638515)
chr2 (96-312)||(41750276-41750489)
chr2 (108-312)||(2521434-2521635)
chr2 (73-312)||(23943887-23944123)
chr2 (78-273)||(40951009-40951201)
chr2 (73-293)||(18713787-18714003)
chr2 (68-293)||(37533672-37533893)
chr2 (66-312)||(40569735-40569980)
chr2 (73-147)||(14403477-14403553)
chr2 (172-312)||(34356811-34356951)
chr2 (172-304)||(1988131-1988263)
chr2 (78-149)||(13790019-13790090)
chr2 (78-304)||(14832540-14832762)
chr2 (66-153)||(5003102-5003189)
chr2 (74-152)||(4875501-4875579)
chr2 (78-208)||(3254308-3254434)
chr2 (79-148)||(41298186-41298255)
chr2 (79-152)||(45212662-45212735)
chr2 (175-294)||(1623206-1623325)
chr2 (81-148)||(25444932-25444999)
chr2 (78-133)||(25625054-25625109)
chr2 (78-153)||(45693918-45693993)
chr2 (87-153)||(11763667-11763733)
chr2 (72-150)||(39819413-39819491)
chr2 (173-289)||(37851678-37851794)
chr2 (305-341)||(39995196-39995232)
chr2 (306-341)||(2521646-2521681)
chr2 (306-341)||(21737465-21737500)
chr2 (306-341)||(37533923-37533958)
chr2 (78-148)||(14253255-14253325)
chr2 (239-304)||(45694075-45694140)
chr2 (309-341)||(2050840-2050872)
chr2 (309-341)||(5770175-5770207)
chr2 (309-341)||(6171765-6171797)
chr2 (309-341)||(11071579-11071611)
chr2 (218-314)||(11763480-11763576)
chr2 (309-341)||(14253496-14253528)
chr2 (309-341)||(14777563-14777595)
chr2 (309-341)||(18713722-18713754)
chr2 (309-341)||(27358028-27358060)
chr2 (309-341)||(37233403-37233435)
chr2 (173-293)||(41298048-41298168)
chr2 (309-341)||(42674726-42674758)
chr2 (309-341)||(45694162-45694194)
chr2 (310-341)||(3902431-3902462)
chr2 (310-341)||(6571662-6571693)
chr2 (79-149)||(13539399-13539469)
chr2 (311-341)||(41729195-41729225)
chr2 (242-295)||(3254192-3254245)
chr2 (312-341)||(20426548-20426577)
chr2 (78-115)||(36590878-36590915)
chr2 (308-341)||(41750502-41750535)
chr2 (309-341)||(14832784-14832816)
chr2 (309-341)||(17965957-17965989)
chr2 (309-341)||(24499416-24499448)
chr2 (309-341)||(39819670-39819702)
[»] chr7 (75 HSPs)
chr7 (73-341)||(48160656-48160920)
chr7 (72-312)||(27419335-27419572)
chr7 (78-273)||(30686142-30686333)
chr7 (78-312)||(45045355-45045586)
chr7 (73-312)||(33378558-33378794)
chr7 (73-312)||(45265159-45265395)
chr7 (78-293)||(37534233-37534444)
chr7 (68-293)||(44565764-44565986)
chr7 (73-312)||(48341088-48341323)
chr7 (73-312)||(35488300-35488536)
chr7 (73-312)||(9947101-9947338)
chr7 (73-312)||(27213966-27214202)
chr7 (79-312)||(43948975-43949205)
chr7 (70-312)||(34930578-34930817)
chr7 (73-312)||(11329717-11329953)
chr7 (78-293)||(39553911-39554124)
chr7 (73-293)||(48313846-48314063)
chr7 (78-293)||(44819983-44820195)
chr7 (87-283)||(38543932-38544125)
chr7 (109-312)||(8419700-8419900)
chr7 (78-312)||(25097797-25098029)
chr7 (73-273)||(28904336-28904533)
chr7 (78-293)||(27248022-27248234)
chr7 (87-304)||(45722897-45723101)
chr7 (172-309)||(6656585-6656722)
chr7 (172-312)||(38396477-38396618)
chr7 (185-312)||(16825465-16825593)
chr7 (73-312)||(25924748-25924984)
chr7 (172-312)||(9814325-9814466)
chr7 (172-312)||(40212708-40212849)
chr7 (172-304)||(41684141-41684273)
chr7 (78-153)||(31598452-31598527)
chr7 (172-273)||(41632514-41632616)
chr7 (73-312)||(45448666-45448902)
chr7 (189-314)||(6656332-6656457)
chr7 (78-160)||(22156438-22156520)
chr7 (78-160)||(22212353-22212435)
chr7 (172-289)||(31921861-31921976)
chr7 (73-157)||(17276422-17276506)
chr7 (172-255)||(43569853-43569936)
chr7 (218-304)||(18824012-18824097)
chr7 (203-312)||(25045728-25045837)
chr7 (78-133)||(24769243-24769298)
chr7 (306-341)||(33378813-33378848)
chr7 (310-342)||(5543195-5543227)
chr7 (73-149)||(5543401-5543477)
chr7 (309-341)||(9947055-9947087)
chr7 (238-314)||(11000588-11000664)
chr7 (309-341)||(11000676-11000708)
chr7 (309-341)||(25045682-25045714)
chr7 (309-341)||(27248267-27248299)
chr7 (309-341)||(30686057-30686089)
chr7 (309-341)||(35488254-35488286)
chr7 (309-341)||(40212863-40212895)
chr7 (309-341)||(45440881-45440913)
chr7 (309-341)||(45448916-45448948)
chr7 (78-149)||(18823891-18823962)
chr7 (311-342)||(41684086-41684117)
chr7 (311-341)||(10902715-10902745)
chr7 (310-344)||(38528769-38528803)
chr7 (244-294)||(43446012-43446062)
chr7 (308-341)||(11329966-11329999)
chr7 (311-340)||(25098045-25098074)
chr7 (308-341)||(28904251-28904284)
chr7 (311-344)||(31598653-31598686)
chr7 (308-341)||(39554156-39554189)
chr7 (87-148)||(40385899-40385960)
chr7 (308-341)||(43949218-43949251)
chr7 (173-294)||(45440728-45440849)
chr7 (309-341)||(18824119-18824151)
chr7 (73-153)||(38396633-38396712)
chr7 (309-341)||(44566019-44566051)
chr7 (309-341)||(45723123-45723155)
chr7 (309-341)||(48314096-48314128)
chr7 (309-341)||(48341336-48341368)
[»] chr5 (51 HSPs)
chr5 (69-304)||(27480731-27480961)
chr5 (68-312)||(8406613-8406854)
chr5 (73-312)||(22936023-22936259)
chr5 (66-312)||(18411926-18412169)
chr5 (73-293)||(28602280-28602497)
chr5 (78-312)||(11855766-11855997)
chr5 (78-312)||(19065616-19065847)
chr5 (72-293)||(555836-556054)
chr5 (68-312)||(4765671-4765912)
chr5 (73-273)||(12970680-12970877)
chr5 (73-337)||(26637112-26637368)
chr5 (73-273)||(29543165-29543362)
chr5 (78-304)||(1664460-1664682)
chr5 (78-314)||(27481086-27481319)
chr5 (73-273)||(32535661-32535858)
chr5 (172-293)||(14206951-14207073)
chr5 (73-304)||(6091439-6091667)
chr5 (172-312)||(36703693-36703834)
chr5 (73-293)||(6930366-6930582)
chr5 (78-312)||(8646502-8646732)
chr5 (78-145)||(20962289-20962356)
chr5 (73-152)||(28429452-28429531)
chr5 (244-314)||(40275864-40275934)
chr5 (78-157)||(31583322-31583401)
chr5 (78-145)||(42012459-42012526)
chr5 (307-341)||(27480981-27481015)
chr5 (294-344)||(30899514-30899564)
chr5 (100-149)||(35603045-35603094)
chr5 (309-341)||(8646456-8646488)
chr5 (309-341)||(11855720-11855752)
chr5 (309-341)||(12970595-12970627)
chr5 (173-293)||(17251634-17251753)
chr5 (309-341)||(27481331-27481363)
chr5 (309-341)||(28602529-28602561)
chr5 (309-341)||(29543080-29543112)
chr5 (309-341)||(31583127-31583159)
chr5 (311-342)||(6930616-6930647)
chr5 (310-341)||(18412184-18412215)
chr5 (310-341)||(20962565-20962596)
chr5 (311-341)||(19065570-19065600)
chr5 (240-294)||(35348653-35348707)
chr5 (309-339)||(43346962-43346992)
chr5 (308-341)||(555771-555804)
chr5 (308-341)||(6091688-6091721)
chr5 (172-309)||(20962410-20962547)
chr5 (83-148)||(35348797-35348862)
chr5 (308-341)||(36703847-36703880)
chr5 (73-153)||(14207088-14207168)
chr5 (309-337)||(28429675-28429703)
chr5 (309-341)||(40275820-40275852)
chr5 (73-137)||(43347177-43347241)
[»] chr4 (87 HSPs)
chr4 (72-312)||(40435627-40435864)
chr4 (73-312)||(43722992-43723228)
chr4 (73-312)||(25932169-25932405)
chr4 (73-312)||(27763010-27763246)
chr4 (73-312)||(39730404-39730640)
chr4 (73-312)||(13230100-13230336)
chr4 (73-273)||(31938020-31938216)
chr4 (73-312)||(45595996-45596232)
chr4 (73-289)||(18405367-18405580)
chr4 (78-312)||(35999419-35999650)
chr4 (66-314)||(23686508-23686753)
chr4 (67-312)||(48879047-48879289)
chr4 (73-273)||(55968150-55968347)
chr4 (73-312)||(39835418-39835654)
chr4 (70-312)||(41744332-41744571)
chr4 (79-293)||(50673035-50673245)
chr4 (67-293)||(48873743-48873966)
chr4 (73-273)||(45747946-45748142)
chr4 (78-312)||(48519002-48519233)
chr4 (73-312)||(6280032-6280268)
chr4 (73-341)||(27555155-27555420)
chr4 (73-293)||(41859176-41859393)
chr4 (78-293)||(42773681-42773893)
chr4 (73-312)||(47670090-47670326)
chr4 (79-293)||(34238084-34238295)
chr4 (68-273)||(8321968-8322170)
chr4 (78-283)||(18931486-18931688)
chr4 (73-273)||(935854-936051)
chr4 (78-293)||(32953256-32953468)
chr4 (172-312)||(34049708-34049849)
chr4 (78-304)||(52469430-52469654)
chr4 (173-293)||(38414032-38414152)
chr4 (172-322)||(36858230-36858378)
chr4 (172-293)||(25916163-25916285)
chr4 (172-312)||(27942560-27942701)
chr4 (73-153)||(7258692-7258772)
chr4 (78-148)||(14796296-14796366)
chr4 (73-138)||(18405131-18405196)
chr4 (176-272)||(39498652-39498749)
chr4 (176-272)||(39501991-39502088)
chr4 (78-160)||(10401040-10401122)
chr4 (305-342)||(12275975-12276012)
chr4 (280-341)||(52414168-52414229)
chr4 (173-289)||(18094073-18094189)
chr4 (189-293)||(30415743-30415847)
chr4 (73-149)||(36860027-36860103)
chr4 (308-344)||(38394883-38394919)
chr4 (78-153)||(38413909-38413984)
chr4 (79-157)||(37014646-37014724)
chr4 (176-272)||(47426393-47426482)
chr4 (309-341)||(936104-936136)
chr4 (309-341)||(6279986-6280018)
chr4 (309-341)||(13230054-13230086)
chr4 (309-341)||(25916098-25916130)
chr4 (310-342)||(26165343-26165375)
chr4 (309-341)||(27762964-27762996)
chr4 (309-341)||(34049662-34049694)
chr4 (312-344)||(36858438-36858470)
chr4 (309-341)||(39730358-39730390)
chr4 (309-341)||(42773926-42773958)
chr4 (309-341)||(45747861-45747893)
chr4 (309-341)||(48518956-48518988)
chr4 (181-304)||(18405586-18405709)
chr4 (73-152)||(30790276-30790354)
chr4 (310-341)||(50672970-50673001)
chr4 (312-346)||(9297138-9297172)
chr4 (79-157)||(12276173-12276250)
chr4 (309-339)||(30415880-30415910)
chr4 (308-342)||(39498802-39498836)
chr4 (308-342)||(39502141-39502175)
chr4 (311-341)||(47426306-47426336)
chr4 (261-302)||(4689649-4689690)
chr4 (308-341)||(8322222-8322255)
chr4 (308-341)||(18405299-18405332)
chr4 (308-341)||(25932418-25932451)
chr4 (308-341)||(34238019-34238052)
chr4 (308-341)||(35999663-35999696)
chr4 (172-273)||(36858527-36858628)
chr4 (308-341)||(40435877-40435910)
chr4 (308-341)||(43723241-43723274)
chr4 (308-341)||(44309737-44309770)
chr4 (308-341)||(45596245-45596278)
chr4 (308-341)||(47670339-47670372)
chr4 (308-341)||(48879302-48879335)
chr4 (311-339)||(7258943-7258971)
chr4 (73-153)||(38394635-38394715)
chr4 (81-137)||(44309497-44309553)
[»] chr1 (97 HSPs)
chr1 (71-312)||(1597453-1597691)
chr1 (72-293)||(32202443-32202661)
chr1 (73-294)||(37436749-37436966)
chr1 (78-293)||(48916152-48916364)
chr1 (76-312)||(13653579-13653812)
chr1 (73-312)||(14788448-14788684)
chr1 (73-312)||(25789488-25789724)
chr1 (78-312)||(9831981-9832212)
chr1 (80-273)||(4683523-4683713)
chr1 (73-312)||(20260197-20260433)
chr1 (65-312)||(5518615-5518858)
chr1 (73-312)||(6911210-6911446)
chr1 (73-273)||(8331739-8331936)
chr1 (73-312)||(9115562-9115798)
chr1 (73-312)||(52630498-52630734)
chr1 (87-273)||(35187195-35187378)
chr1 (68-312)||(46666428-46666669)
chr1 (73-312)||(12190288-12190524)
chr1 (78-312)||(51445190-51445421)
chr1 (172-312)||(2632673-2632813)
chr1 (73-273)||(5806426-5806623)
chr1 (79-286)||(48462263-48462465)
chr1 (172-312)||(3572676-3572817)
chr1 (73-312)||(32824646-32824883)
chr1 (73-273)||(39930182-39930379)
chr1 (87-312)||(52699577-52699798)
chr1 (67-273)||(36361502-36361705)
chr1 (73-304)||(47677369-47677596)
chr1 (73-293)||(29091397-29091608)
chr1 (172-341)||(49822982-49823148)
chr1 (172-273)||(39329428-39329530)
chr1 (73-273)||(38964829-38965026)
chr1 (67-250)||(47031578-47031758)
chr1 (78-312)||(2430227-2430457)
chr1 (172-273)||(6978590-6978692)
chr1 (73-145)||(9011437-9011509)
chr1 (172-292)||(30240831-30240951)
chr1 (172-250)||(1007591-1007669)
chr1 (79-152)||(52186265-52186338)
chr1 (73-157)||(19923726-19923810)
chr1 (78-153)||(13932139-13932214)
chr1 (73-152)||(25473980-25474059)
chr1 (78-148)||(49627304-49627374)
chr1 (172-293)||(50190895-50191016)
chr1 (73-160)||(24116594-24116681)
chr1 (78-149)||(31807018-31807089)
chr1 (233-312)||(47037339-47037418)
chr1 (78-152)||(1228147-1228221)
chr1 (87-148)||(45813666-45813727)
chr1 (73-133)||(3939226-3939286)
chr1 (73-157)||(46960353-46960437)
chr1 (306-341)||(6911465-6911500)
chr1 (309-344)||(38519124-38519159)
chr1 (78-129)||(47845422-47845473)
chr1 (190-257)||(52186195-52186262)
chr1 (78-115)||(11014842-11014879)
chr1 (173-250)||(37336617-37336694)
chr1 (309-341)||(1597407-1597439)
chr1 (309-341)||(2430471-2430503)
chr1 (79-151)||(2632584-2632656)
chr1 (308-344)||(3939514-3939550)
chr1 (309-341)||(5518569-5518601)
chr1 (309-341)||(12190242-12190274)
chr1 (309-341)||(20260151-20260183)
chr1 (309-341)||(36361757-36361789)
chr1 (78-231)||(38519253-38519402)
chr1 (309-341)||(39329583-39329615)
chr1 (309-341)||(46666683-46666715)
chr1 (309-341)||(46960602-46960634)
chr1 (310-341)||(20505054-20505085)
chr1 (310-341)||(29091642-29091673)
chr1 (78-149)||(37261549-37261620)
chr1 (73-148)||(50191036-50191111)
chr1 (310-341)||(52630749-52630780)
chr1 (311-341)||(13931949-13931979)
chr1 (311-341)||(32824899-32824929)
chr1 (308-342)||(35187430-35187464)
chr1 (311-341)||(37436686-37436716)
chr1 (311-341)||(48916087-48916117)
chr1 (309-338)||(1007722-1007751)
chr1 (308-341)||(6978744-6978777)
chr1 (308-341)||(9115811-9115844)
chr1 (310-339)||(13521297-13521326)
chr1 (309-338)||(13653826-13653855)
chr1 (309-342)||(17475385-17475418)
chr1 (309-342)||(24116399-24116432)
chr1 (308-341)||(25789737-25789770)
chr1 (308-341)||(39930431-39930464)
chr1 (308-341)||(47037431-47037464)
chr1 (309-338)||(50190833-50190862)
chr1 (309-341)||(2632827-2632859)
chr1 (309-341)||(4683439-4683471)
chr1 (309-341)||(8331989-8332021)
chr1 (73-153)||(17475576-17475656)
chr1 (309-341)||(30240984-30241016)
chr1 (309-341)||(37261822-37261854)
chr1 (309-337)||(52186115-52186143)
[»] chr6 (24 HSPs)
chr6 (73-312)||(8029027-8029263)
chr6 (68-312)||(7053689-7053930)
chr6 (68-293)||(16968644-16968866)
chr6 (68-273)||(10246266-10246468)
chr6 (73-293)||(18897645-18897862)
chr6 (73-312)||(2657424-2657660)
chr6 (78-273)||(14170744-14170935)
chr6 (73-293)||(1316743-1316960)
chr6 (187-312)||(7344194-7344320)
chr6 (201-304)||(345950-346053)
chr6 (78-153)||(21008246-21008321)
chr6 (78-149)||(6706023-6706094)
chr6 (77-157)||(8314622-8314702)
chr6 (297-341)||(14170975-14171019)
chr6 (306-341)||(7053635-7053670)
chr6 (238-312)||(6705876-6705950)
chr6 (83-149)||(7344765-7344831)
chr6 (308-341)||(6705830-6705863)
chr6 (308-341)||(14781685-14781718)
chr6 (309-341)||(2657674-2657706)
chr6 (309-341)||(8314887-8314919)
chr6 (310-341)||(345896-345927)
chr6 (310-341)||(16968900-16968931)
chr6 (237-304)||(3869391-3869461)
[»] scaffold0006 (5 HSPs)
scaffold0006 (76-312)||(143340-143573)
scaffold0006 (73-314)||(201650-201887)
scaffold0006 (310-341)||(119295-119326)
scaffold0006 (311-341)||(201901-201931)
scaffold0006 (309-338)||(143587-143616)
[»] scaffold0189 (2 HSPs)
scaffold0189 (78-312)||(29063-29294)
scaffold0189 (309-341)||(29017-29049)
[»] scaffold0238 (2 HSPs)
scaffold0238 (69-149)||(23604-23683)
scaffold0238 (310-341)||(23361-23392)
[»] scaffold0005 (1 HSPs)
scaffold0005 (78-148)||(43365-43435)
[»] scaffold0702 (3 HSPs)
scaffold0702 (309-341)||(3630-3662)
scaffold0702 (252-312)||(3676-3736)
scaffold0702 (73-157)||(3828-3912)
[»] scaffold0662 (3 HSPs)
scaffold0662 (252-312)||(4368-4428)
scaffold0662 (309-341)||(4442-4474)
scaffold0662 (73-153)||(4190-4270)


Alignment Details
Target: chr8 (Bit Score: 140; Significance: 4e-73; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 100 - 425
Target Start/End: Complemental strand, 6805946 - 6805601
Alignment:
Q  100 ttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtttggttaactttataatattctt 199  Q
    ||||||||| |||||| ||| |||||||||||||||||| |||||||||||||| |||||||||        ||||||||||||||||||||||||||      
T  6805946 ttatttttaagaataacattccttgaaatataaagatgggaattttattccaaggtatatatttaggaaaaatatgtttggttaactttataatattccc 6805847  T
Q  200 agaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctcatcattttctttgggaaaaatatt 299  Q
    || |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| | |||||||| |||||||| ||    
T  6805846 aggaaccatgaaaatagagattttaataggtatctatttatgaatttattctcatctccatgagaactttattctcacccttttctttaggaaaaatttt 6805747  T
Q  300 ctatttcca-----------------ggaataaaatttagtaaac----ttgtaacaaacataagcttagggttgtaacttcaaagtaataaannnnnnn 378  Q
    ||||| |||                 |||||||||||||||||||    |||||||||||||||| ||||| |||||||||||||||||||||           
T  6805746 ctattcccaagaacatattatactcgggaataaaatttagtaaacttgtttgtaacaaacataagtttaggcttgtaacttcaaagtaataaa-tttttt 6805648  T
Q  379 cttaatttccatatttaaaagaaatattaatttactcaatttgttac 425  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||    
T  6805647 cttattttctatatttaaaagaaatattaatttactcaatttgttac 6805601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 25837635 - 25837871
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||||||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  25837635 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaat 25837730  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||  |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  25837731 atgtttggttagctttataatattcctatgaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccatgggaactttat 25837830  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    |  || | |||| |||||||||| | ||||||| |||||||    
T  25837831 tgccacccttttttttgggaaaatttttctattcccaggaa 25837871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 72 - 312
Target Start/End: Original strand, 18297835 - 18298072
Alignment:
Q  72 aggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnn 171  Q
    ||||| |||||||| ||||||||||||||||||| ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||            
T  18297835 aggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaa 18297930  T
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaacttta 270  Q
    |||||||||||| ||||||||||||  ||| |||||| ||| ||| |||| |||||||| | |||||||||||||||||| ||| ||||| |||||||||    
T  18297931 tatgtttggttagctttataatatttctaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatttccatgggaacttta 18298030  T
Q  271 ttctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||| || | ||||| ||||||||  | ||||||| |||||||    
T  18298031 ttcccacccttttccttgggaaattttttctattcccaggaa 18298072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 37392893 - 37392657
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  37392893 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaat 37392798  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  37392797 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 37392698  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  37392697 tcccacccttttccttgggaaattttttctattcccaggaa 37392657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 38363805 - 38364041
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  38363805 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaat 38363900  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  38363901 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 38364000  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||  ||||||||  | ||||||| |||||||    
T  38364001 tcccaccctttttcttgggaaattttttctattcccaggaa 38364041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 73 - 289
Target Start/End: Original strand, 3049733 - 3049946
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||||||||||||||||| |||||||||| |||  ||    ||        |    
T  3049733 ggtgtgtttgtttcaagtttatcaaatttattcataggaataacattccttgaaatataaagatgggaattttattcgaaggaat----ttagaaaaaat 3049828  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| || ||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  3049829 atgtttggttatctttataatattcctaggaatcataaaaatagggattataataggtaaactatttatgaatttattctcatctccatgggaactttat 3049928  T
Q  272 tctcatcattttctttgg 289  Q
    || || | ||||||||||    
T  3049929 tcccacccttttctttgg 3049946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 73 - 293
Target Start/End: Complemental strand, 38133085 - 38132868
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| |||||||||| |||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        |    
T  38133085 ggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttaggaaaaat 38132990  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  ||||||||||||||||||||||||||||  |||||||||    
T  38132989 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcacatctccatgagaactttat 38132890  T
Q  272 tctcatcattttctttgggaaa 293  Q
    || || | ||||| ||||||||    
T  38132889 tcccacccttttccttgggaaa 38132868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 16313854 - 16313618
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||||  ||||||||||||||      ||||        |    
T  16313854 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgagaattttattccaag----gaatttaggaaaaat 16313759  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaatagg-tatctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| || ||| ||| ||| |||| |||||||  |  ||||||||||||||||| ||||||||| ||||||||||    
T  16313758 atgtttggttagctttataatattcctaggaatcataaaaatagggattataataggaaaattatttatgaatttattctcatctccatgggaactttat 16313659  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || ||||||  ||||||||  | ||||||| |||||||    
T  16313658 tcccaccatttttcttgggaaattttttctattcccaggaa 16313618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 35818771 - 35818535
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        |    
T  35818771 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttaggaaaaat 35818676  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  35818675 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 35818576  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  35818575 tcccacccttttccttgggaaattttttctattcccaggaa 35818535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 12710369 - 12710605
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||| || ||           |    
T  12710369 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagaaatgta----ggaaaaat 12710464  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    |||||| |||| ||||||||||||| ||| |||||| ||| ||  |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  12710465 atgtttcgttagctttataatattcctaggaaccataaaaataaggattataataggtaaactatttatgaatttattctcatctccatgggaactttat 12710564  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  12710565 tcccacccttttccttgggaaattttttctattcccaggaa 12710605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 293
Target Start/End: Original strand, 7930958 - 7931180
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||| ||||||||||| ||||||||| |||  ||| ||||||||||||  ||||||||||||||  ||    ||        
T  7930958 cttagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattctttggaatataaagatgagaattttattccaaggaat----ttagga 7931053  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaac 266  Q
        |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||    
T  7931054 aaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaac 7931153  T
Q  267 tttattctcatcattttctttgggaaa 293  Q
    ||||||| || | ||||| ||||||||    
T  7931154 tttattcccacccttttccttgggaaa 7931180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 26061868 - 26062065
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||||||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        |    
T  26061868 ggtgtgtttgttttaagtttaccaaatttattcctaggaataacattccttgtaatataaagatgagaattttattccaaggaat----ttaggaaaaat 26061963  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||| |  ||||||||||||||||| ||||||||| ||||||||||    
T  26061964 atgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaattatttatgaatttattcccatctccatgggaactttat 26062063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 172 - 303
Target Start/End: Original strand, 7317196 - 7317326
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttat 271  Q
    |||||||||||||||||||||||||| ||||| |||||||| ||| |||| ||||||||| ||||||| |||||||||| ||||||||| ||||||||||    
T  7317196 tatgtttggttaactttataatattcctagaa-ccatgaaaatagggattataataggtaactatttacgaatttattcccatctccatgggaactttat 7317294  T
Q  272 tctcatcattttctttgggaaaaatattctat 303  Q
    || || ||||||  ||||||||| | ||||||    
T  7317295 tcccaccatttttcttgggaaaatttttctat 7317326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 78 - 273
Target Start/End: Complemental strand, 10896558 - 10896366
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        ||||||    
T  10896558 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttaggaaaaatatgtt 10896463  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaactttattc 273  Q
    |||||| ||||||||||||||||| |||||| ||| ||| |||| |||||||| | |||||||||||||||||| ||||||||| ||||||||||||    
T  10896462 tggttagctttataatattcttaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttattc 10896366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 41432468 - 41432543
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  41432468 gtttgttttaagtttatcaaatttatttttaggaataacatttcttgaaacataaagatggaaattttattccaag 41432543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 78 - 312
Target Start/End: Original strand, 42755596 - 42755827
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||| ||||||| ||||||||||||||  ||    ||        ||| ||    
T  42755596 gtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatatgaagatgggaattttattccaaggaat----ttaggaaaaatatatt 42755691  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| |||||||||  ||||||||||| ||    
T  42755692 tggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccatgagaactttattccca 42755791  T
Q  277 tcattttctttgggaaaaatattctatttccaggaa 312  Q
     | ||||| ||||||||  | ||||||| |||||||    
T  42755792 cccttttccttgggaaattttttctattcccaggaa 42755827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 78 - 304
Target Start/End: Complemental strand, 5020833 - 5020612
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||||||||||||||||||||||||| |||  ||| ||||||||||||  |||||||||| |||     |||||        ||||||    
T  5020833 gtttgtttcaagtttatcaaatttatttttaggaataacattctttggaatataaagatgataattttattctaag----gtatttaggaaaaatatgtt 5020738  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctcat 277  Q
    |||||||||||||||||||| | | || ||| ||| ||  |||| ||||||||| ||| |||||||||||||| ||||| ||| |||||||||||| ||     
T  5020737 tggttaactttataatattc-tgggaatcataaaaatatggattataataggtaactacttatgaatttattcccatcttcatgggaactttattcccac 5020639  T
Q  278 cattttctttgggaaaaatattctatt 304  Q
    | ||||| ||||||||| | |||||||    
T  5020638 ccttttccttgggaaaatttttctatt 5020612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 73 - 293
Target Start/End: Complemental strand, 18726967 - 18726750
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||| ||||||||| |||  ||| |||||||||||| |||||||||||||||  ||    ||        |    
T  18726967 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattaattggaatataaagatgaaaattttattccaaggaat----ttaggaaaaat 18726872  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | |||||||||||||||||  |||||||||  |||||||||    
T  18726871 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttatttccatctccatgagaactttat 18726772  T
Q  272 tctcatcattttctttgggaaa 293  Q
    || || | ||||| ||||||||    
T  18726771 tcccacccttttccttgggaaa 18726750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 65 - 293
Target Start/End: Complemental strand, 26602292 - 26602067
Alignment:
Q  65 gaacttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttn 164  Q
    ||||||| |||| |||||||| ||||||| ||||||||||  ||| ||||| ||| ||||||| |||||||||| ||||||||||||||  ||    ||     
T  26602292 gaacttagggtgtgtttgtttcaagtttaccaaatttattgctagaaataacattccttgaaacataaagatgggaattttattccaaggaat----tta 26602197  T
Q  165 nnnnnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattgg 263  Q
           |||||||||||| ||||||||||||| | | |||||| ||| ||| |||| |||||| ||  |||||||||||||||||| ||||||||| ||    
T  26602196 ggaaaaatatgtttggttagctttataatattccttggaaccataaaaatagggattataatagctaaactatttatgaatttattctcatctccatggg 26602097  T
Q  264 aactttattctcatcattttctttgggaaa 293  Q
    |||||||||| || | ||||| ||||||||    
T  26602096 aactttattcccacccttttccttgggaaa 26602067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 68 - 273
Target Start/End: Complemental strand, 32661286 - 32661084
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| |||||||  |||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  || |||          
T  32661286 cttagggtgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttat----ga 32661191  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaac 266  Q
        |||||||||||| ||||||||||||| ||  |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||    
T  32661190 aaaatatgtttggttagctttataatattcctaagaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaac 32661091  T
Q  267 tttattc 273  Q
    |||||||    
T  32661090 tttattc 32661084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 176 - 314
Target Start/End: Complemental strand, 29421736 - 29421598
Alignment:
Q  176 tttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctc 275  Q
    |||| ||||||||||||||||| ||| |||||| ||| ||| |||| ||||||||| |||  ||| ||||||||| ||||||||| |||||||||||| |    
T  29421736 tttgattaactttataatattcctaggaaccataaaaatagggattataataggtaactacatataaatttattctcatctccatgggaactttattccc 29421637  T
Q  276 atcattttctttgggaaaaatattctatttccaggaata 314  Q
    | ||||||||||||||||| | ||||||| |||| ||||    
T  29421636 accattttctttgggaaaatttttctattcccagaaata 29421598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 78 - 299
Target Start/End: Complemental strand, 21137472 - 21137257
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    ||||||||| |||||||||||||||||  ||| ||||| |||| ||| ||||||||||||  |||||||||  ||| |||    ||        ||||||    
T  21137472 gtttgtttttagtttatcaaatttattactag-aataacattttttggaatataaagatgagaattttattttaaggtat----ttaaaaaaaatatgtt 21137378  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctcat 277  Q
    |||||||||||||||||||| ||| |||||| ||| ||  |||| ||||||||| |||  ||||||||||||| ||||||||   ||||||||||  ||     
T  21137377 tggttaactttataatattcctaggaaccataaaaatacggattataataggtaactacatatgaatttattctcatctccacgagaactttatttccac 21137278  T
Q  278 cattttctttgggaaaaatatt 299  Q
    |||||||||| |||||||||||    
T  21137277 cattttcttt-ggaaaaatatt 21137257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 248
Target Start/End: Complemental strand, 31117873 - 31117699
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||| ||||||||||| |||  ||| ||||||||||||  ||||||||| |||  ||| ||           |    
T  31117873 ggtgtgtttgtttcaagtttatcaaatttatatttaggaataacattcattggaatataaagatgagaattttatttcaaagtatttaga-aaaaaatat 31117775  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttat 248  Q
    ||| ||||||||||||||||||||| ||| |||||| ||| |||| ||| ||||||||| ||||||||||||||||    
T  31117774 atgcttggttaactttataatattcctaggaaccataaaaatagatattataataggtaactatttatgaatttat 31117699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 172 - 273
Target Start/End: Complemental strand, 41228965 - 41228864
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaacttta 270  Q
    |||||||||||| ||||||||||||| |||||||||| ||| ||| |||| |||||||| | ||||||||||||||||||  |||||||| |||||||||    
T  41228965 tatgtttggttagctttataatattcctagaaaccataaaaatagggattataataggtaaactatttatgaatttattc-tatctccataggaacttta 41228867  T
Q  271 ttc 273  Q
    |||    
T  41228866 ttc 41228864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 78 - 250
Target Start/End: Complemental strand, 40197395 - 40197226
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    ||||| || ||||||| ||||||||||  |||||||||||||  ||| ||||||||||||| |||||||||| |||  ||    ||        ||||||    
T  40197395 gtttgcttcaagtttaccaaatttattcctaggaataatattctttggaatataaagatgggaattttattctaaggaat----ttaggaaaaatatgtt 40197300  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  40197299 tggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 40197226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 34672085 - 34672161
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatat--aaagatggaaattttat 147  Q
    |||| |||||||||||||||||||||||||||||||| ||||| | | ||||||||||  |||||||||||||||||    
T  34672085 ggtgtgtttgttttaagtttatcaaatttatttttagaaataacagtccttgaaatataaaaagatggaaattttat 34672161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 290
Target Start/End: Complemental strand, 33444969 - 33444757
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| |||||||   ||||||||  || |||||| ||||| || |||||||||||| |||||||||| |||| |||    ||        |    
T  33444969 ggtgtgtttgtttcaagtttactgaatttattcataagaataacatttcatggaatataaagatgaaaattttatttcaaggtat----ttagaaaaaat 33444874  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttatt 272  Q
    ||||||||||||||||||||||||| ||| || |||  || ||| |||| ||||||||| |||  |||||| ||| || ||||| ||| |||||||||||    
T  33444873 atgtttggttaactttataatattcctagcaatcatacaaatagtgattctaataggtaactacatatgaaatta-tctcatcttcatgggaactttatt 33444775  T
Q  273 ctcatcattttctttggg 290  Q
    | || |||||||||||||    
T  33444774 cccaccattttctttggg 33444757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 43872312 - 43872232
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||||| ||||||  ||||||||||| ||||||||| ||| ||||||||||| ||||| |||||||||||||||    
T  43872312 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaag 43872232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 172 - 283
Target Start/End: Original strand, 35394210 - 35394321
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttat 271  Q
    |||||||||||||||||||||||||| ||  |||||| ||| ||  |||| ||||||||| |||| ||||| ||| ||| ||||||| | ||||||||||    
T  35394210 tatgtttggttaactttataatattcctatgaaccataaaaataaggattataataggtaactatatatgagtttgttcccatctccttaggaactttat 35394309  T
Q  272 tctcatcatttt 283  Q
    || || ||||||    
T  35394310 tcccaccatttt 35394321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 312
Target Start/End: Complemental strand, 1554688 - 1554465
Alignment:
Q  87 aagtttatcaaatttatttttaggaataatatttcttgaaatataaa-gatggaaattttattccaagatatatatttnnnnnnnntatgtttggttaac 185  Q
    ||||||| |||||||||| |||||||||| ||| |||| |||||||| ||||| ||||||||||||||  ||    ||        |||| |||||||      
T  1554688 aagtttaccaaatttattcttaggaataacattccttggaatataaaagatgggaattttattccaaggaat----ttaggaaaaatatggttggttagt 1554593  T
Q  186 tttataatattcttagaaaccatgaaagtagagattttaataggtatct-atttatgaatttattcacatctccattggaactttattctcatcattttc 284  Q
    |||||||||||| ||| |||||| ||| ||| |||| |||||||||  | || ||||||||||||| ||||||||| | |||||||||| || | |||||    
T  1554592 tttataatattcctaggaaccataaaattagggattataataggtaaattatgtatgaatttattcccatctccatggaaactttattcccacccttttc 1554493  T
Q  285 tttgggaaaaatattctatttccaggaa 312  Q
     ||| ||||  | ||||||| |||||||    
T  1554492 cttgagaaattttttctattcccaggaa 1554465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 289
Target Start/End: Complemental strand, 19160992 - 19160875
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttat 271  Q
    |||||||||||| | ||||||||||||||| |||||| ||| ||| |||| |||||||||  ||  |||||||| |||| |||||||||   ||||||||    
T  19160992 tatgtttggttagcattataatattcttaggaaccataaaaatagggattataataggtaattacatatgaattcattctcatctccatgacaactttat 19160893  T
Q  272 tctcatcattttctttgg 289  Q
    || || | ||||||||||    
T  19160892 tcccacccttttctttgg 19160875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 37982138 - 37982054
Alignment:
Q  69 ttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatg-gaaattttattccaag 153  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||||| ||| |||| || ||||||||| ||| ||||||||||||    
T  37982138 ttaaggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttg-aacataaagatgagaatttttattccaag 37982054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 25899383 - 25899459
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||| |||||||| |||| || ||||||||||||||||||||| ||| |||| ||||||||||| | ||||||||||    
T  25899383 ggtgtgtttgtttcaagtgtaacaaatttatttttaggaataacattccttggaatataaagataggaattttattc 25899459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 15226690 - 15226770
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    ||||||||||||| || |||| |||||||||| ||||||||||  || |||| ||||||||||||  ||||||||| ||||    
T  15226690 ggtgcgtttgtttcaattttaccaaatttattattaggaataactttccttggaatataaagatgagaattttatttcaag 15226770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 306 - 341
Target Start/End: Complemental strand, 26602038 - 26602003
Alignment:
Q  306 ccaggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||||||    
T  26602038 ccaggaataaaatttagtaaacttgtaacaaacata 26602003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 73 - 152
Target Start/End: Complemental strand, 33533739 - 33533660
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaa 152  Q
    |||| |||||||| |||||| |||||||||||  |||||||| |||| |||  ||||||||||||  |||||||||||||    
T  33533739 ggtgtgtttgtttcaagtttgtcaaatttattcctaggaatattattcctttgaatataaagatgtgaattttattccaa 33533660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 231
Target Start/End: Complemental strand, 16219293 - 16219134
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||||||||||||| ||||||||  |||||||||  || |||| ||  ||||||||  ||||||||||||||     |||||        
T  16219293 cttagggtgtgtttgttttaagtttatccaatttattcctaggaataacgttccttggaacttaaagatgagaattttattccaag----gtatttagaa 16219198  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggta 231  Q
         ||||||||||||| ||||||||||||| | |||||||||| | | |||| |||||||||    
T  16219197 aaaagatgtttggttaacattataatattcttgggaaccatgaaaatggggattataataggta 16219134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 41432714 - 41432747
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacataa 342  Q
    ||||||||||||||||||||||||||||||||||    
T  41432714 ggaataaaatttagtaaacttgtaacaaacataa 41432747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 1554451 - 1554419
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  1554451 ggaataaaatttagtaaacttgtaacaaacata 1554419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 3049983 - 3050015
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  3049983 ggaataaaatttagtaaacttgtaacaaacata 3050015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 7317347 - 7317379
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  7317347 ggaataaaatttagtaaacttgtaacaaacata 7317379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 16313604 - 16313572
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  16313604 ggaataaaatttagtaaacttgtaacaaacata 16313572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 18298086 - 18298118
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  18298086 ggaataaaatttagtaaacttgtaacaaacata 18298118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 18726716 - 18726684
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  18726716 ggaataaaatttagtaaacttgtaacaaacata 18726684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 21137229 - 21137197
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  21137229 ggaataaaatttagtaaacttgtaacaaacata 21137197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 35394364 - 35394396
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  35394364 ggaataaaatttagtaaacttgtaacaaacata 35394396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 35818521 - 35818489
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  35818521 ggaataaaatttagtaaacttgtaacaaacata 35818489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 38364055 - 38364087
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  38364055 ggaataaaatttagtaaacttgtaacaaacata 38364087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 342
Target Start/End: Original strand, 15226940 - 15226971
Alignment:
Q  311 aataaaatttagtaaacttgtaacaaacataa 342  Q
    ||||||||||||||||||||||||||||||||    
T  15226940 aataaaatttagtaaacttgtaacaaacataa 15226971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 149
Target Start/End: Original strand, 37124070 - 37124149
Alignment:
Q  70 taaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    ||||||| |||| |||||||||||||||||||||| |||  ||||| | |  ||| ||||||||||||  ||||||||||    
T  37124070 taaggtgtgtttattttaagtttatcaaatttattgttaaaaataacaatatttggaatataaagatgagaattttattc 37124149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 314
Target Start/End: Original strand, 12649957 - 12650097
Alignment:
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttatt 272  Q
    ||||||| ||||| ||||||||||||||| |||    ||| |||||||| |||||||||  ||  | ||||||||||  ||| | ||| |||||||||||    
T  12649957 atgtttgattaacattataatattcttaggaacttaaaaaatagagattataataggtagttacatgtgaatttattttcattttcatgggaactttatt 12650056  T
Q  273 ctcatcattttctttgggaaaaatattctatttccaggaata 314  Q
    | ||  |||||||||| |  |||| ||||||||||| |||||    
T  12650057 cccactattttctttgcg-taaattttctatttccatgaata 12650097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 12710618 - 12710651
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  12710618 aggaataaattttagtaaacttgtaacaaacata 12710651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 26062117 - 26062150
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  26062117 aggaataaattttagtaaacttgtaacaaacata 26062150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 38132835 - 38132802
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  38132835 aggaataaattttagtaaacttgtaacaaacata 38132802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 16219040 - 16219008
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||| ||||||||||||||||||||||    
T  16219040 ggaataaaatctagtaaacttgtaacaaacata 16219008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 19161088 - 19161024
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatg 137  Q
    |||| |||||||| |||||||||||||||||| | | |||||| |||  ||| ||||||||||||    
T  19161088 ggtgtgtttgtttcaagtttatcaaatttattctcaagaataacattctttggaatataaagatg 19161024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 25837885 - 25837917
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||| ||||||||||||||||||||    
T  25837885 ggaataaaattttgtaaacttgtaacaaacata 25837917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 342
Target Start/End: Complemental strand, 29421585 - 29421553
Alignment:
Q  310 gaataaaatttagtaaacttgtaacaaacataa 342  Q
    |||||||||||| ||||||||||||||||||||    
T  29421585 gaataaaatttaataaacttgtaacaaacataa 29421553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 5e-51; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 72 - 283
Target Start/End: Complemental strand, 26849493 - 26849286
Alignment:
Q  72 aggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnn 171  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||     |||||            
T  26849493 aggtgtgtttgttttaagtttaccaaatttatttttaggaataatatttcttggaatataaagatggaaattttatttcaag----gtatttagaaaaaa 26849398  T
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttat 271  Q
    |||||||||||||||||||||||||| ||| |||||| ||| |||||||| ||||||||| |||||||||||||||||| ||||||  | ||||||||||    
T  26849397 tatgtttggttaactttataatattcataggaaccataaaaatagagattataataggtaactatttatgaatttattctcatctctgtaggaactttat 26849298  T
Q  272 tctcatcatttt 283  Q
    || || ||||||    
T  26849297 tcccaccatttt 26849286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 68 - 312
Target Start/End: Complemental strand, 8476660 - 8476419
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||| ||||||||||| ||||||||| ||| |||| ||||||||||||||||||||||||||||  ||    ||        
T  8476660 cttagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatggaaattttattccaaggaat----ttagga 8476565  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaac 266  Q
        |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||    
T  8476564 aaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaac 8476465  T
Q  267 tttattctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||||||| || | ||||| ||||||||  | ||||||| |||||||    
T  8476464 tttattcccacccttttccttgggaaattttttctattcccaggaa 8476419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 68 - 309
Target Start/End: Complemental strand, 53166076 - 53165839
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||||| ||||||||| || |||||| ||| ||||||||||||||||||  ||||||||||||| |||    ||        
T  53166076 cttagggtgtgtttgtttcaagtttatccaatttatttctaagaataacattccttgaaatataaagatgggtattttattccaaggtat----ttagga 53165981  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaact 267  Q
        |||||||||||||| ||||||||||| ||| || ||| ||| |||| ||| ||||||||| |||||||||||||||||| ||||||||| ||||||    
T  53165980 aaaatatgtttggttaaccttataatattcctaggaatcataaaaatagatattataataggtaactatttatgaatttattctcatctccatgggaact 53165881  T
Q  268 ttattctcatcattttctttgggaaaaatattctatttccag 309  Q
    |||||| || | ||||  |||| |||||| ||||||| ||||    
T  53165880 ttattcccaccctttttcttggaaaaaattttctattcccag 53165839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 78 - 295
Target Start/End: Complemental strand, 43132498 - 43132285
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| |||||||  ||||||||| |||||||||| ||| |||| ||||||||||||  |||||||||||||| |||    ||        ||||||    
T  43132498 gtttgtttcaagtttactaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaaggtat----ttaggaaaaatatgtt 43132403  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctcat 277  Q
    |||||||||||||||||||| ||| |||||||||| ||| |||| ||||||||| ||||||||||||||| || ||||||| | |||||| ||||| ||     
T  43132402 tggttaactttataatattcctaggaaccatgaaaatagggattataataggtaactatttatgaatttaatctcatctccgtgggaactctattcccac 43132303  T
Q  278 cattttctttgggaaaaa 295  Q
    | ||||| ||||||||||    
T  43132302 ccttttccttgggaaaaa 43132285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 1098923 - 1099158
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| |||||||||| |||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  1098923 ggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaat 1099018  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttatt 272  Q
    |||||||| || ||||||||||||  ||| |||||| ||| ||| |||| |||||||||  ||||||||||||||||| ||||||||| |||||||||||    
T  1099019 atgtttggctagctttataatatttctaggaaccataaaaatagggattataataggtaaatatttatgaatttattcccatctccatgggaactttatt 1099118  T
Q  273 ctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    | || | ||||| ||||||||  | ||||||| |||||||    
T  1099119 cccacccttttccttgggaaattttttctattcccaggaa 1099158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 73 - 309
Target Start/End: Original strand, 24574291 - 24574524
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||||||||||||||||  ||||||||||||||  || |||          |    
T  24574291 ggtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttgaaatataaagatgagaattttattccaaggaatttat----gaaaaat 24574386  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||  |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  24574387 atgtttggttagctttataatattcctaggaaccataaaaataaggattataataggtaaactatttatgaatttattctcatctccatgggaactttat 24574486  T
Q  272 tctcatcattttctttgggaaaaatattctatttccag 309  Q
    || || ||||||  ||||||||  | ||||||||||||    
T  24574487 tcccaccatttttcttgggaaattttttctatttccag 24574524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 73 - 293
Target Start/End: Complemental strand, 6231848 - 6231631
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||||||||||||||| | ||||||||||||||  ||    ||        |    
T  6231848 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttgaaatataaagataggaattttattccaaggaat----ttaagaaaaat 6231753  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatct-atttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| ||||||| |  | |||||||||||||||| ||||||||| ||||||||||    
T  6231752 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggaaaattatttatgaatttattcccatctccatgggaactttat 6231653  T
Q  272 tctcatcattttctttgggaaa 293  Q
    || || ||||||| ||||||||    
T  6231652 tcccaccattttcattgggaaa 6231631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 11239467 - 11239231
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        |    
T  11239467 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttaggaaaaat 11239372  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  11239371 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 11239272  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  11239271 tcccacccttttccttgggaaattttttctattcccaggaa 11239231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 33218260 - 33218024
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        |    
T  33218260 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttaggaaaaat 33218165  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| |||||| || ||||||||||    
T  33218164 atgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctctatgggaactttat 33218065  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  33218064 tcccacccttttccttgggaaattttttctattcccaggaa 33218024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 67 - 293
Target Start/End: Original strand, 44952026 - 44952249
Alignment:
Q  67 acttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnn 166  Q
    ||||| |||| |||||||| ||||||| |||||||||| |||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||       
T  44952026 acttagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttagg 44952121  T
Q  167 nnnnntatgtttggttaactttataatattc-ttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattgga 264  Q
         |||||||||||||||||||||||||| |||| ||| || ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||    
T  44952122 aaaaatatgtttggttaactttataatattccttaggaac-ataaaaatagggattataataggtaaactatttatgaatttattctcatctccatggga 44952220  T
Q  265 actttattctcatcattttctttgggaaa 293  Q
    ||||||||| || | ||||| ||||||||    
T  44952221 actttattcccacccttttccttgggaaa 44952249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 78 - 292
Target Start/End: Complemental strand, 47115199 - 47114988
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        ||||||    
T  47115199 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaatatgtt 47115104  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| ||    
T  47115103 tggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttattccca 47115004  T
Q  277 tcattttctttgggaa 292  Q
     | ||||| |||||||    
T  47115003 cccttttccttgggaa 47114988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 73 - 304
Target Start/End: Original strand, 46359676 - 46359904
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  || |||          |    
T  46359676 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttat----gaaaaat 46359771  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatct-atttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| || ||| ||| ||| |||| ||||||| |  | |||||||||||||||| ||||||||| ||||||||||    
T  46359772 atgtttggttagctttataatattcctaggaatcataaaaatagggattataataggaaaattatttatgaatttattcccatctccatgggaactttat 46359871  T
Q  272 tctcatcattttctttgggaaaaatattctatt 304  Q
    || || | ||||| |||||||| || |||||||    
T  46359872 tcccacccttttccttgggaaatattttctatt 46359904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 172 - 312
Target Start/End: Original strand, 19532964 - 19533104
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttat 271  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||| |||| ||||||||| |||||||||||||||||| ||||||||  | ||||||||    
T  19532964 tatgtttggttaactttataatattcctaggaaccatgaaaatagggattataataggtaactatttatgaatttattcccatctccaaggaaactttat 19533063  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| |||| |||||  ||||||| |||||||    
T  19533064 tcccacccttttccttggaaaaaaatttctattcccaggaa 19533104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 68 - 312
Target Start/End: Original strand, 26848741 - 26848982
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        
T  26848741 cttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttagga 26848836  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaac 266  Q
        |||||||||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||| | |||||||||||||||||| ||| ||||| |||||    
T  26848837 aaaatatgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatttccatgggaac 26848936  T
Q  267 tttattctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||||||| || | ||||| || |||||  | ||||||| |||||||    
T  26848937 tttattcccacccttttccttaggaaattttttctattcccaggaa 26848982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 68 - 292
Target Start/End: Complemental strand, 20414817 - 20414596
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    ||||||||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| |||||||||||||   | | ||||        
T  20414817 cttaaggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaa---aga-atttagga 20414722  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaac 266  Q
        |||||||| ||| ||||||||||||| ||  |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||    
T  20414721 aaaatatgtttgattagctttataatattcctaagaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaac 20414622  T
Q  267 tttattctcatcattttctttgggaa 292  Q
    ||||||| || | ||||| |||||||    
T  20414621 tttattcccacccttttccttgggaa 20414596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 78 - 273
Target Start/End: Complemental strand, 31611327 - 31611135
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| |||||||||| ||| |||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        ||||||    
T  31611327 gtttgtttcaagtttaccaaatttattcttatgaataacattccttggaatataaagatgggaattttattccaaggaat----ttagaaaaaatatgtt 31611232  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattc 273  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||||    
T  31611231 tggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccataggaactttattc 31611135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 20297517 - 20297714
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||||||||||| |||||||||| |||||||||| |||  ||| ||||||||||||| ||||||||| ||||  ||    ||        |    
T  20297517 ggtgtgtttgttttaagtttaccaaatttattcttaggaataacattctttggaatataaagatgggaattttatttcaaggaat----ttaggaaaaat 20297612  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaactttat 271  Q
    |||||||||| |||||||||||||| ||| |||||| ||| ||| |||| |||||||| |  ||||||||||||||||| ||||||||| ||||||||||    
T  20297613 atgtttggttgactttataatattcctaggaaccataaaaatagggattataataggtaaattatttatgaatttattcccatctccatgggaactttat 20297712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 73 - 293
Target Start/End: Complemental strand, 48340104 - 48339887
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||  ||||||||||||  ||||||||||||||  ||    ||        |    
T  48340104 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttagaatataaagatgagaattttattccaaggaat----ttaggaaaaat 48340009  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  48340008 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 48339909  T
Q  272 tctcatcattttctttgggaaa 293  Q
    || || | ||||| ||||||||    
T  48339908 tcccacccttttccttgggaaa 48339887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 40907990 - 40908225
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||||||||||||||||| ||||||||||||||      ||||        |    
T  40907990 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgaaatataaagatgggaattttattccaag----gaatttaggaaaaat 40908085  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| |||||| |||||| ||| |||||| ||| ||| |||| |||||||| |  ||||||||||||||||| ||||| ||| ||||||||||    
T  40908086 atgtttggttagctttat-atattcctaggaaccataaaaatagggattataataggtaaattatttatgaatttattcccatcttcatgggaactttat 40908184  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  40908185 tcccacccttttccttgggaaattttttctattcccaggaa 40908225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 10823064 - 10822829
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||| ||||||||| ||| |||  ||||||||||||  |||||||||||||| |||    ||        |    
T  10823064 ggtgtgtttgtttcaagtttagcaaatttatttctaggaataacattccttacaatataaagatgagaattttattccaaggtat----ttaggaaaaat 10822969  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttatt 272  Q
    ||||||||||||||||||||||||||||| ||||||  || ||| |||| | |||| || |||||||||| ||||||| |||||||||   |||||||||    
T  10822968 atgtttggttaactttataatattcttaggaaccatacaaatagggattattatagataactatttatgattttattcccatctccatgaaaactttatt 10822869  T
Q  273 ctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    | || | ||||| | ||||||  | ||||||| |||||||    
T  10822868 cccacccttttcctagggaaattttttctattcccaggaa 10822829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 78 - 293
Target Start/End: Complemental strand, 28124778 - 28124566
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||||||||| ||| ||| |||| |||||||| |||  ||||||||||||||  ||    ||        ||||||    
T  28124778 gtttgtttcaagtttaccaaatttatttttaggattaacattccttggaatataaatatgagaattttattccaaggaat----ttaggaaaaatatgtt 28124683  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||||||||| ||  |||||| ||| ||| |||| ||||| |||  |||||||||||||||||| ||||| ||| |||||||||||| ||    
T  28124682 tggttagctttataatattcctaagaaccataaaaatagggattataatatgtaaactatttatgaatttattcccatcttcatgggaactttattccca 28124583  T
Q  277 tcattttctttgggaaa 293  Q
     | ||||| ||||||||    
T  28124582 cccttttccttgggaaa 28124566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 73 - 314
Target Start/End: Complemental strand, 9320796 - 9320557
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| |||||||| |||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||| |   |   ||||        |    
T  9320796 ggtgtgtttgtttcaagtttatgaaatttattcataggaataacattccttggaatataaagatgagaattttattcctaagga---atttaggaaaaat 9320700  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||  ||||| |||  |||||||||||||||||  ||||||||| ||||||||||    
T  9320699 atgtttggttagctttataatattcctaggaaccataaaaatagggatcataataagtaaactatttatgaatttatttccatctccatgggaactttat 9320600  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaata 314  Q
    || || | ||||| || |||||  | ||||||| |||||||||    
T  9320599 tcccacctttttccttaggaaattttttctattcccaggaata 9320557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 69 - 293
Target Start/End: Original strand, 29512320 - 29512540
Alignment:
Q  69 ttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnn 168  Q
    |||||||| |||||||| || |||| ||||||||||  ||||||||| ||| |||  ||||||||||||| ||||||||| ||||| ||    ||         
T  29512320 ttaaggtgtgtttgtttcaaatttaccaaatttattcctaggaataacattccttagaatataaagatgggaattttatttcaagaaat----ttaggaa 29512415  T
Q  169 nnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaact 267  Q
       || ||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | |||||||||||||||||| |||||| || ||||||    
T  29512416 aaatacgtttggttagctttataatattcataggaaccataaaaatagggattataataggtaaactatttatgaatttattc-catctctatgggaact 29512514  T
Q  268 ttattctcatcattttctttgggaaa 293  Q
    |||||  || | ||||| ||||||||    
T  29512515 ttatttccacccttttccttgggaaa 29512540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 72 - 289
Target Start/End: Complemental strand, 12228602 - 12228390
Alignment:
Q  72 aggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnn 171  Q
    ||||| |||||||  |||||||||||||||||| || ||||||| |||  ||||||||||||||||  |||||||||| |||     |||||            
T  12228602 aggtgtgtttgttacaagtttatcaaatttattcttgggaataacattatttgaaatataaagatgagaattttattctaag----gtatttaaaaaaaa 12228507  T
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||||  ||||| |||||||||| || ||| ||| ||   ||| |||||| || |||  ||||| ||||||| ||||||||| ||||||||||    
T  12228506 tatgtttggttagttttatgatattcttaggaatcataaaaataagtattataatagataactacatatgattttattctcatctccatgggaactttat 12228407  T
Q  272 tctcatcattttctttgg 289  Q
    ||||| | ||||||||||    
T  12228406 tctca-ccttttctttgg 12228390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 31267694 - 31267630
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatg 137  Q
    |||| ||||||||||||||||||  |||||||||||||||||| ||||||| |||||||||||||    
T  31267694 ggtgtgtttgttttaagtttatcggatttatttttaggaataacatttcttaaaatataaagatg 31267630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 32070994 - 32071074
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| ||||||||||| |||||||||||||||  || |||||| |||||||| ||||||||||||  ||||||||||||||    
T  32070994 ggtgggtttgttttaaatttatcaaatttattcctatgaataacatttcttggaatataaagatgagaattttattccaag 32071074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 308
Target Start/End: Original strand, 32071266 - 32071401
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttat 271  Q
    |||||||||||||||||||||||||| ||| |||||| ||| || ||||| ||||||||| |||  ||  ||||||||| |||||||| || ||||||||    
T  32071266 tatgtttggttaactttataatattcctaggaaccataaaaataaagattataataggtaactacatacaaatttattctcatctcca-tgtaactttat 32071364  T
Q  272 tctcatcattttctttgggaaaaatattctatttcca 308  Q
    ||||  | ||||||||  |||||   |||||||||||    
T  32071365 tctcgcccttttctttaagaaaatctttctatttcca 32071401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 6927820 - 6927891
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||||||||||||||||||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||    
T  6927820 gtttgttttaagtttatcaaatttattactaggaataacattccttggaatataaagatgagaattttattc 6927891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 49216029 - 49216104
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||||||||||||  |||| ||||| ||||||||||| || |||| ||||||||||||| ||||||||||||||    
T  49216029 gtttgttttaagttttccaaaattattcttaggaataatgttccttggaatataaagatgggaattttattccaag 49216104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 160
Target Start/End: Complemental strand, 38140712 - 38140628
Alignment:
Q  76 gcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatata 160  Q
    |||||||||| || ||||| |||||||||| ||||||||| ||| |||| ||||||||| ||  |||||||||||||| ||||||    
T  38140712 gcgtttgtttcaattttataaaatttatttctaggaataacattccttggaatataaaggtgtgaattttattccaaggtatata 38140628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 312
Target Start/End: Complemental strand, 31436271 - 31436034
Alignment:
Q  71 aaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnn 170  Q
    |||||| |||||||| ||||||| ||||||||||  | | ||||| |||  ||  ||||||||||| | |||||||||||||| ||||||              
T  31436271 aaggtgtgtttgtttcaagtttaccaaatttattcctggaaataacattctttagaatataaagataggaattttattccaaggtatata----gaaaaa 31436176  T
Q  171 ntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaacttta 270  Q
      |||||||||||  |||||||||||  | | || ||| ||| ||  |||| ||||||||| |||  |  |||||||||| ||||||||| |||||||||    
T  31436175 acatgtttggttagttttataatatttcttggaatcataaaaataaggattataataggtaactacattagaatttattctcatctccatgggaacttta 31436076  T
Q  271 ttctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||| || || |||||||||||||| | |||||||| ||||||    
T  31436075 ttcccaccaatttctttgggaaaatttttctattttcaggaa 31436034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 43719267 - 43719192
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||||| ||||||| ||||||||||| ||||||||| ||| |||| ||||||||| ||  ||||||||||||||    
T  43719267 gtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagttgagaattttattccaag 43719192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 304
Target Start/End: Complemental strand, 28770556 - 28770329
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| || |||| ||||||||||  ||||||||| ||| |||| || |||| ||||  |||||||||||||| ||||||                
T  28770556 ggtgtgtttgtttcaaatttaccaaatttattcctaggaataacattccttggaacataatgatgagaattttattccaaggtatata----gaaaaatg 28770461  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttatt 272  Q
    ||||||| ||||| |||||||||| |  | |||||| ||| ||| |||| |||||||||  ||  |||||| | |||| ||||| |||  ||||||||||    
T  28770460 atgtttgtttaacgttataatattatcgggaaccataaaaatagggattataataggtaattacatatgaaatcattcccatcttcatgagaactttatt 28770361  T
Q  273 ctcatcattttctttgggaaaaatattctatt 304  Q
    | || ||||||||||||||||| | |||||||    
T  28770360 cccaccattttctttgggaaaatttttctatt 28770329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 309 - 344
Target Start/End: Complemental strand, 1246999 - 1246964
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacataagc 344  Q
    ||||||||||||||||||||||||||||||||||||    
T  1246999 ggaataaaatttagtaaacttgtaacaaacataagc 1246964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 137
Target Start/End: Original strand, 18460582 - 18460641
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatg 137  Q
    |||||||| ||||||||||||||||||| || |||||| |||| | ||||||||||||||    
T  18460582 gtttgtttcaagtttatcaaatttatttctacgaataacatttttcgaaatataaagatg 18460641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 306 - 341
Target Start/End: Original strand, 24574546 - 24574581
Alignment:
Q  306 ccaggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||||||    
T  24574546 ccaggaataaaatttagtaaacttgtaacaaacata 24574581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 306 - 341
Target Start/End: Complemental strand, 31436023 - 31435988
Alignment:
Q  306 ccaggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||||||    
T  31436023 ccaggaataaaatttagtaaacttgtaacaaacata 31435988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 306 - 341
Target Start/End: Complemental strand, 33647803 - 33647768
Alignment:
Q  306 ccaggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||||||    
T  33647803 ccaggaataaaatttagtaaacttgtaacaaacata 33647768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 149
Target Start/End: Complemental strand, 33650356 - 33650285
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||||||| ||||||| |||||||||||||| |||||| |||  ||||||| ||||||||  ||||||||||    
T  33650356 gtttgtttcaagtttaccaaatttatttttatgaataacattatttgaaatctaaagatgagaattttattc 33650285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 309 - 344
Target Start/End: Complemental strand, 53165822 - 53165787
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacataagc 344  Q
    ||||||||||||||||||||||||||||||||||||    
T  53165822 ggaataaaatttagtaaacttgtaacaaacataagc 53165787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 304
Target Start/End: Complemental strand, 2565644 - 2565578
Alignment:
Q  238 tatgaatttattcacatctccattggaactttattctcatcattttctttgggaaaaatattctatt 304  Q
    |||||||||| || ||||| ||| |||||||||||| || |||||||||||| |||||| |||||||    
T  2565644 tatgaatttactctcatcttcatgggaactttattcccaccattttctttggaaaaaattttctatt 2565578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 343
Target Start/End: Complemental strand, 9320545 - 9320511
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacataag 343  Q
    |||||||||||||||||||||||||||||||||||    
T  9320545 ggaataaaatttagtaaacttgtaacaaacataag 9320511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 64 - 153
Target Start/End: Complemental strand, 6832278 - 6832189
Alignment:
Q  64 agaacttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||| | |||| |||||||| || |||| ||||||||||  || |||||| ||| |||| ||||||||||||  ||||||||||||||    
T  6832278 agaactaagggtgtgtttgtttcaaatttaccaaatttattcctaagaataacattacttggaatataaagatgagaattttattccaag 6832189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 111
Target Start/End: Original strand, 13642828 - 13642861
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttagga 111  Q
    ||||||||||||||||||||||||||||||||||    
T  13642828 gtttgttttaagtttatcaaatttatttttagga 13642861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 6231598 - 6231566
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  6231598 ggaataaaatttagtaaacttgtaacaaacata 6231566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 6832053 - 6832021
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  6832053 ggaataaaatttagtaaacttgtaacaaacata 6832021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 12931038 - 12931006
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  12931038 ggaataaaatttagtaaacttgtaacaaacata 12931006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 26848996 - 26849028
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  26848996 ggaataaaatttagtaaacttgtaacaaacata 26849028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 31611082 - 31611050
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  31611082 ggaataaaatttagtaaacttgtaacaaacata 31611050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 40908239 - 40908271
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  40908239 ggaataaaatttagtaaacttgtaacaaacata 40908271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 46359926 - 46359958
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  46359926 ggaataaaatttagtaaacttgtaacaaacata 46359958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 47114954 - 47114922
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  47114954 ggaataaaatttagtaaacttgtaacaaacata 47114922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 341
Target Start/End: Original strand, 18460914 - 18460945
Alignment:
Q  310 gaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||    
T  18460914 gaataaaatttagtaaacttgtaacaaacata 18460945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 24783938 - 24784009
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||||||| ||||||| ||||||||||  || |||||| ||| |||| ||||||||||||  ||||||||||    
T  24783938 gtttgtttcaagtttaccaaatttattcataagaataacattccttggaatataaagatgagaattttattc 24784009  T

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Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 303
Target Start/End: Original strand, 40584502 - 40584561
Alignment:
Q  244 tttattcacatctccattggaactttattctcatcattttctttgggaaaaatattctat 303  Q
    ||||||| ||||||||| |||||||||||| || |||||||||||| |||| | ||||||    
T  40584502 tttattcccatctccatgggaactttattcccaccattttctttggaaaaacttttctat 40584561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 338
Target Start/End: Original strand, 24784180 - 24784210
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaac 338  Q
    |||||||||||||||||||||||||||||||    
T  24784180 aggaataaaatttagtaaacttgtaacaaac 24784210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 115
Target Start/End: Original strand, 27822995 - 27823037
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataa 115  Q
    |||| |||||||| ||||||| |||||||||||||||||||||    
T  27822995 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataa 27823037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 341
Target Start/End: Original strand, 32071420 - 32071450
Alignment:
Q  311 aataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||    
T  32071420 aataaaatttagtaaacttgtaacaaacata 32071450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 1099171 - 1099204
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  1099171 aggaataaattttagtaaacttgtaacaaacata 1099204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 39932622 - 39932589
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacataa 342  Q
    ||||||||||||||||||||| ||||||||||||    
T  39932622 ggaataaaatttagtaaacttataacaaacataa 39932589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 44952281 - 44952314
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  44952281 aggaataaattttagtaaacttgtaacaaacata 44952314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 48339855 - 48339822
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  48339855 aggaataaattttagtaaacttgtaacaaacata 48339822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 12931119 - 12931059
Alignment:
Q  244 tttattcacatctccattggaactttattctcatcattttctttgggaaaaatattctatt 304  Q
    ||||||| |||||| || |||||||||||| || ||||||||||| ||||| | |||||||    
T  12931119 tttattcccatctctatgggaactttattcccaccattttctttgagaaaacttttctatt 12931059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 27093769 - 27093833
Alignment:
Q  89 gtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||||||||||||| |||  ||||||||| |||  ||||||||||||  ||||||||| ||||    
T  27093769 gtttatcaaatttattcttaaaaataatattccttagaatataaagatgtgaattttatttcaag 27093833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 28124533 - 28124501
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||| |||||||||||    
T  28124533 ggaataaaatttagtaaacttataacaaacata 28124501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 43719177 - 43719141
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccat 208  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  43719177 tatgtttggttagctttataatattcttaggaaccat 43719141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 1e-48; HSPs: 79)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 20426829 - 20426594
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||| |||    | |||||        |    
T  20426829 ggtgtgtttgtttaaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatttcaa----tgtatttagaaaaaat 20426734  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttatt 272  Q
    ||||||||||||||||||||||||| ||  |||||| ||| |||||||| ||||||||| |||||||||||||||||| ||||||||| |||||||||||    
T  20426733 atgtttggttaactttataatattcctaccaaccataaaaatagagattataataggtaactatttatgaatttattctcatctccataggaactttatt 20426634  T
Q  273 ctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    |||| | ||||| ||||||||||| ||||||| |||||||    
T  20426633 ctcacccttttccttgggaaaaattttctattcccaggaa 20426594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 78 - 292
Target Start/End: Original strand, 3902186 - 3902396
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| || |||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||    ||        ||||||    
T  3902186 gtttgtttcaagtttaccatatttatttttaggaataacattccttgaaatataaagatgggaattttattccaagatat----ttagaaaaaatatgtt 3902281  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctcat 277  Q
    ||||||||||||||||||||  || |||||| ||| ||| |||| ||||||||| |||| ||||||||||||| ||||||||  |||||||||||| ||     
T  3902282 tggttaactttataatattcacaggaaccataaaaatagggattataataggtaactatatatgaatttattctcatctccaagggaactttattcccac 3902381  T
Q  278 cattttctttgggaa 292  Q
    |||||||||||||||    
T  3902382 cattttctttgggaa 3902396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 78 - 312
Target Start/End: Complemental strand, 28312038 - 28311808
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| |||||||||||||| |||    ||        ||||||    
T  28312038 gtttgtttcaagtttaccaaatttattcataggaataacattccttggaatataaagatgggaattttattccaaggtat----ttaggaaaaatatgtt 28311943  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctcat 277  Q
    |||||||||||||||||||| ||| |||||||||| ||| |||| ||||||||| |||||||||||||||||| ||||||||  |||||||||||| ||     
T  28311942 tggttaactttataatattcctaggaaccatgaaaatagggattataataggtaactatttatgaatttattcccatctccacgggaactttattcccac 28311843  T
Q  278 cattttctttgggaaaaatattctatttccaggaa 312  Q
    | ||||| |||||||| || ||||||| |||||||    
T  28311842 ccttttccttgggaaagattttctattcccaggaa 28311808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 78 - 312
Target Start/End: Original strand, 37233159 - 37233389
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| |||||||||||||| |||    ||        ||||||    
T  37233159 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggtat----ttaggaaaaatatgtt 37233254  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctcat 277  Q
    |||||||||||||||||||| ||| |||||||||| ||  |||| ||||||||| |||||||||||||||||| ||||||||| |||||||||||| ||     
T  37233255 tggttaactttataatattcctaggaaccatgaaaataaggattataataggtaactatttatgaatttattcccatctccatgggaactttattcccac 37233354  T
Q  278 cattttctttgggaaaaatattctatttccaggaa 312  Q
    | ||||| |||||||  || ||||||| |||||||    
T  37233355 ccttttccttgggaacgattttctattcccaggaa 37233389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 68 - 312
Target Start/End: Original strand, 6171510 - 6171751
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        
T  6171510 cttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttagga 6171605  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaac 266  Q
        |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||    
T  6171606 aaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaac 6171705  T
Q  267 tttattctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||||||| || ||||||| ||||||||  | ||||||| |||||||    
T  6171706 tttattcccaccattttccttgggaaattttttctattcccaggaa 6171751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 78 - 312
Target Start/End: Complemental strand, 21737750 - 21737519
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| |||||||||| |||||||||| ||| |||| |||||||| |||| ||||||||||||||  || |||          ||||||    
T  21737750 gtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaatatgggaattttattccaaggaatttat----gaaaaatatgtt 21737655  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| ||    
T  21737654 tggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttattccca 21737555  T
Q  277 tcattttctttgggaaaaatattctatttccaggaa 312  Q
     ||||||| ||||||||  | ||||||| |||||||    
T  21737554 ccattttccttgggaaattttttctattcccaggaa 21737519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 67 - 312
Target Start/End: Complemental strand, 346698 - 346456
Alignment:
Q  67 acttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnn 166  Q
    ||||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||       
T  346698 acttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttagg 346603  T
Q  167 nnnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaa 265  Q
         |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||    
T  346602 aaaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaa 346503  T
Q  266 ctttattctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    |||||||| || | ||||| ||||||||  | ||||||| |||||||    
T  346502 ctttattcccacccttttccttgggaaattttttctattcccaggaa 346456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 4559283 - 4559519
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||| || |||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  4559283 ggtgtgtttgtttcaagtttaccaaatttatttctaagaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaat 4559378  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  4559379 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 4559478  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  4559479 tcccacccttttccttgggaaattttttctattcccaggaa 4559519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 78 - 293
Target Start/End: Complemental strand, 9734188 - 9733976
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||||||||||| ||||||||||| ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        ||||||    
T  9734188 gtttgttttaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaatatgtt 9734093  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||  ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| ||    
T  9734092 tggttggctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttattccca 9733993  T
Q  277 tcattttctttgggaaa 293  Q
     | ||||| ||||||||    
T  9733992 cccttttccttgggaaa 9733976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 14777845 - 14777609
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  14777845 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaat 14777750  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| ||| || ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||| |||||    
T  14777749 atgtttggttagctttataatattcctaggaactataaaaatagggattataataggtaaactatttatgaatttattcccatctccataggaattttat 14777650  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || ||||||| ||||||||  | ||||||| |||||||    
T  14777649 tcccaccattttccttgggaaattttttctattcccaggaa 14777609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 41729477 - 41729241
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| |||||||||| |||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  41729477 ggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaat 41729382  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| | ||||||||    
T  41729381 atgtttggttagctttataatattcctagtaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccatggaaactttat 41729282  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  41729281 tcccacccttttccttgggaaattttttctattcccaggaa 41729241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 73 - 292
Target Start/End: Original strand, 7007309 - 7007524
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||  |||||||||| |    |  |||||        |    
T  7007309 ggtgtgtttgttttaagtttaccaaatttattattaggaataacatttcttgaaatataaagatgagaattttattcta----aagtatttagaaaaaat 7007404  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttatt 272  Q
    ||||||||||||||||||||||||| ||  |||||| ||| ||| || | ||||||||| |||  ||||||||||||| ||||||||| | || ||||||    
T  7007405 atgtttggttaactttataatattcctaagaaccattaaaatagggagtataataggtaactacatatgaatttattctcatctccatggtaattttatt 7007504  T
Q  273 ctcatcattttctttgggaa 292  Q
    | || |||||||||||||||    
T  7007505 cccaccattttctttgggaa 7007524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 78 - 312
Target Start/End: Original strand, 26309996 - 26310227
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||  ||| |||| ||||||||||||| ||||||||| ||||| ||    ||        |||| |    
T  26309996 gtttgtttcaagtttaccaaatttattcctaggaatagcattccttggaatataaagatgggaattttattacaagaaat----ttaggaaaaatatggt 26310091  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||||||||||||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| ||    
T  26310092 tggttagctttataatattcttaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttattccca 26310191  T
Q  277 tcattttctttgggaaaaatattctatttccaggaa 312  Q
     | ||||||||||||||  | ||||||| |||||||    
T  26310192 cccttttctttgggaaattttttctattcccaggaa 26310227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 68 - 312
Target Start/End: Original strand, 11071324 - 11071565
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||||||||||||||||| ||||||||||||||  ||    ||        
T  11071324 cttagggtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttgaaatataaagatgggaattttattccaaggaat----ttagga 11071419  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaac 266  Q
        |||||||||||||||||||||||||| ||| |||||| ||| ||  |||| |||||||| | |||||||||||||||||| ||||| ||| |||||    
T  11071420 aaaatatgtttggttaactttataatattcctaggaaccataaaaatatggattataataggtaaactatttatgaatttattcccatcttcatgggaac 11071519  T
Q  267 tttattctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||||||| || | ||||  ||||||||  | ||||||| |||||||    
T  11071520 tttattcccaccctttttcttgggaaattttttctattcccaggaa 11071565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 2050590 - 2050826
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  2050590 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaat 2050685  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaatagg-tatctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| || ||| ||| |||  ||| |||||||  |  ||||||||||||||||| ||||||||| ||||||||||    
T  2050686 atgtttggttagctttataatattcctaggaatcataaaaataggaattataataggaaaattatttatgaatttattcccatctccatgggaactttat 2050785  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  2050786 tcccacccttttccttgggaaattttttctattcccaggaa 2050826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 78 - 293
Target Start/End: Original strand, 13760696 - 13760908
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||  ||||||||||| ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        ||||||    
T  13760696 gtttgtttcaagtttgccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttagaaaaaatatgtt 13760791  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| ||    
T  13760792 tggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttattccca 13760891  T
Q  277 tcattttctttgggaaa 293  Q
     | ||||| ||||||||    
T  13760892 cccttttccttgggaaa 13760908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 172 - 312
Target Start/End: Complemental strand, 39995391 - 39995250
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaacttta 270  Q
    |||||||||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||    
T  39995391 tatgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccatgggaacttta 39995292  T
Q  271 ttctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||| || ||||||| ||||||||  | ||||||| |||||||    
T  39995291 ttcccaccattttccttgggaaattttttctattcccaggaa 39995250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 17965707 - 17965904
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||| ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  17965707 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaat 17965802  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | |||||||||||||||||| |||||| || ||||||||||    
T  17965803 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctctatgggaactttat 17965902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 5770457 - 5770221
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||| ||||||||| ||| |||| ||||||||||| | ||||||||||||||  ||    ||        |    
T  5770457 ggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagataggaattttattccaaggaat----ttaagaaaaat 5770362  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatct-atttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| ||||||| |  | |||||||||||||||| ||||| ||| ||||||||||    
T  5770361 atgtttggttagctttataatattcctagcaaccataaaaatagggattataataggaaaattatttatgaatttattcccatcttcatgggaactttat 5770262  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || ||||||  ||||||||  | ||||||| |||||||    
T  5770261 tcccaccatttttcttgggaaattttttctattcccaggaa 5770221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 37192246 - 37192482
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||| ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        |    
T  37192246 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttaggaaaaat 37192341  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||  |||||||| | ||||||||    
T  37192342 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattccaatctccatggaaactttat 37192441  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  37192442 tcccacccttttccttgggaaattttttctattcccaggaa 37192482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 42675008 - 42674772
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| |||||||| ||||||||||| | ||||||||||||||  ||    ||        |    
T  42675008 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacatttcttggaatataaagataggaattttattccaaggaat----ttaggaaaaat 42674913  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||| ||||| ||||||||||    
T  42674912 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatttccatgggaactttat 42674813  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||  ||||||||  | ||||||| |||||||    
T  42674812 tcccaccctttttcttgggaaattttttctattcccaggaa 42674772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 314
Target Start/End: Complemental strand, 27358303 - 27358072
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgttt 178  Q
    ||||||||||||||| ||||||||||  ||||||||| |||| ||| ||||||||||||  ||||||||| |||| |||    ||        |||||||    
T  27358303 tttgttttaagtttaccaaatttattcctaggaataacatttattggaatataaagatgagaattttatttcaaggtat----ttagcaaaaatatgttt 27358208  T
Q  179 ggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctcatc 278  Q
    | |||| |||||||||||| ||| |||||| ||| ||  |||| ||||||||| |||||||||||||||||| |||||| || |||||||||||| || |    
T  27358207 gattaaatttataatattcctaggaaccataaaaataaggattataataggtaactatttatgaatttattctcatctctatgggaactttattcccacc 27358108  T
Q  279 attttctttgggaaaaatattctatttccaggaata 314  Q
     ||||| ||||| ||| | ||||||| ||| |||||    
T  27358107 cttttccttgggtaaatttttctattcccatgaata 27358072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 314
Target Start/End: Original strand, 45408981 - 45409212
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgttt 178  Q
    ||||||||||||||| ||||||||||  ||||||||| |||| ||| ||||||||||||  |||||||||||||| |||    ||        |||||||    
T  45408981 tttgttttaagtttaccaaatttattcctaggaataacatttattggaatataaagatgagaattttattccaaggtat----ttagcaaaaatatgttt 45409076  T
Q  179 ggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctcatc 278  Q
    | |||| |||||||||||  ||| |||||| ||| ||  |||| ||||||||| |||||||||||||||||  ||||||||| |||||||||||| || |    
T  45409077 gattaaatttataatatttctaggaaccataaaaataaggattataataggtaactatttatgaatttatttccatctccatgggaactttattcccacc 45409176  T
Q  279 attttctttgggaaaaatattctatttccaggaata 314  Q
     ||||| ||||| ||| | ||||||| ||| |||||    
T  45409177 cttttccttgggtaaatttttctattcccatgaata 45409212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 638318 - 638515
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| ||||| |||||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  638318 ggtgtgtttgatttaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaagaaaaat 638413  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | |||||||||||||||||| |||||||||  |||||||||    
T  638414 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccatgagaactttat 638513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 96 - 312
Target Start/End: Original strand, 41750276 - 41750489
Alignment:
Q  96 aaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtttggttaactttataatat 195  Q
    |||||||||  ||||||||| ||| |||||||||||||||||| ||||||||| ||||  ||    ||        ||||||||||||||||||||||||    
T  41750276 aaatttattcctaggaataacattccttgaaatataaagatgggaattttatttcaaggaat----ttaggaaaaatatgtttggttaactttataatat 41750371  T
Q  196 tcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctcatcattttctttgggaaaa 294  Q
    || ||  |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| || | ||||| ||||||||     
T  41750372 tcctaagaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttattcccacccttttccttgggaaat 41750471  T
Q  295 atattctatttccaggaa 312  Q
     | ||||||| |||||||    
T  41750472 tttttctattcccaggaa 41750489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 108 - 312
Target Start/End: Original strand, 2521434 - 2521635
Alignment:
Q  108 aggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtttggttaactttataatattcttagaaacca 207  Q
    |||||||| ||| |||| ||||||||||||||||||||||||||||  ||    ||        |||||||||||| ||||||||||||| ||| |||||    
T  2521434 aggaataacattccttggaatataaagatggaaattttattccaaggaat----ttaggaaaaatatgtttggttagctttataatattcctaggaacca 2521529  T
Q  208 tgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctcatcattttctttgggaaaaatattctatttc 306  Q
    | ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||| ||||||| || | ||||| ||||||||  | ||||||| |    
T  2521530 taaaaatagggattataataggtaaactatttatgaatttattcccatctccataggaattttattcccacccttttccttgggaaattttttctattcc 2521629  T
Q  307 caggaa 312  Q
    ||||||    
T  2521630 caggaa 2521635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 23943887 - 23944123
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| |||||||||  ||   | | ||||        |    
T  23943887 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattgtaa---aga-atttagaaaaaat 23943982  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatct-atttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| || ||||| |||||||||  | |||||||||||||||| ||||||||| ||||||||||    
T  23943983 atgtttggttacctttataatattcctaggaaccataaaaataaagattataataggtaaattatttatgaatttattctcatctccatgggaactttat 23944082  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||| ||||  | ||||||| |||||||    
T  23944083 tcccacccttttcgttgagaaattttttctattcccaggaa 23944123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 78 - 273
Target Start/End: Complemental strand, 40951201 - 40951009
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| || |||| ||||||||||  ||||||||| ||| |||| |||||||||||| ||||||||||||||   | | ||||        ||||||    
T  40951201 gtttgtttcaaatttaccaaatttattcctaggaataacattccttggaatataaagatgaaaattttattccaa---aga-atttaggaaaaatatgtt 40951106  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattc 273  Q
    |||||| ||||||||||||| ||  |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||||    
T  40951105 tggttagctttataatattcctaagaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccatgggaactttattc 40951009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 73 - 293
Target Start/End: Complemental strand, 18714003 - 18713787
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| ||||| || ||| ||| ||||||||||| ||||||||| ||| |||| ||||||||||||  ||| ||||||||||||||    ||        |    
T  18714003 ggtgtgtttgattcaagcttaccaaatttatttataggaataacattccttggaatataaagatgagaatattattccaagatat----ttagaaaaaat 18713908  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttatt 272  Q
    ||||||||||||||||||||||||| ||  |||||| ||| ||| | || ||||||||  |||  ||| ||||||||  ||||||||| |||||||||||    
T  18713907 atgtttggttaactttataatattcctatgaaccataaaaatagggtttataataggttactacgtataaatttatttccatctccatgggaactttatt 18713808  T
Q  273 ctcatcattttctttgggaaa 293  Q
    | || | ||||||||||||||    
T  18713807 cccacccttttctttgggaaa 18713787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 68 - 293
Target Start/End: Original strand, 37533672 - 37533893
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| |||||||  |||||||||| ||||||||| ||| |||| |||| |||||||| ||||||||||||||  ||    ||        
T  37533672 cttagggtgtgtttgtttcaagtttactaaatttatttctaggaataacattccttggaataaaaagatgggaattttattccaaggaat----ttagga 37533767  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatct-atttatgaatttattcacatctccattggaac 266  Q
        |||||||||||| ||||||| ||||| | | |||||| ||| ||| |||| |||||||||  | |||||||||||||||| ||||||||| |||||    
T  37533768 aaattatgtttggttagctttata-tattcctgggaaccataaaaatagggattataataggtaaattatttatgaatttattcccatctccatgggaac 37533866  T
Q  267 tttattctcatcattttctttgggaaa 293  Q
    ||||||| || | |||| |||||||||    
T  37533867 tttattcccacccttttttttgggaaa 37533893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 66 - 312
Target Start/End: Original strand, 40569735 - 40569980
Alignment:
Q  66 aacttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnn 165  Q
    |||||| |||| |||||||| ||||||| ||||||||||| ||||||||| ||| |||| |||||| | ||| |||||||||||||||     |||||      
T  40569735 aacttagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatatatatatgtaaattttattccaag----gtatttag 40569830  T
Q  166 nnnnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaa 265  Q
           ||||||||||||| ||||||| |||  || ||||   ||| ||| |||| |||||||||  |||  |||| ||||||| ||| ||||| ||||    
T  40569831 aaaaaagatgtttggttaacattataatgttccaaggaacctcaaaaatagggattataataggtaattatacatgattttattcccatttccatgggaa 40569930  T
Q  266 ---ctttattctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
       |||||||| || ||||||||||||||||||| ||||||| |||||||    
T  40569931 cttctttattcccaccattttctttgggaaaaattttctattcccaggaa 40569980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 14403553 - 14403477
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatat--aaagatggaaattttat 147  Q
    |||| |||||||||||||||||||||||||||||||| ||||| | ||||||||||||  |||||||||||||||||    
T  14403553 ggtgagtttgttttaagtttatcaaatttatttttagaaataacagttcttgaaatataaaaagatggaaattttat 14403477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 172 - 312
Target Start/End: Complemental strand, 34356951 - 34356811
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaatagg-tatctatttatgaatttattcacatctccattggaacttta 270  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| |||||||| |||||||  |  ||||||||||||||||| ||| ||| | |||||||||    
T  34356951 tatgtttggttagctttataatattcctaggaaccataaaaatagagattataataggaaaattatttatgaatttattcccat-tccgtgggaacttta 34356853  T
Q  271 ttctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||| || ||||||| ||||||||  | ||||||| |||||||    
T  34356852 ttcccaccattttccttgggaaattttttctattcccaggaa 34356811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 172 - 304
Target Start/End: Original strand, 1988131 - 1988263
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttat 271  Q
    |||||||||||||||||||||||||| | | |||||  ||| ||| |||| ||||||||| |||| || |||||||||| ||||||||| | ||||||||    
T  1988131 tatgtttggttaactttataatattccttggaaccaaaaaaatagggattataataggtaactatataagaatttattctcatctccatggaaactttat 1988230  T
Q  272 tctcatcattttctttgggaaaaatattctatt 304  Q
    || || | ||||| ||| ||||| | |||||||    
T  1988231 tcccacccttttccttgagaaaatttttctatt 1988263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 13790019 - 13790090
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||||||| ||||||||||||||||||| ||||||||| ||| ||||||||||| ||||| |||||||||||    
T  13790019 gtttgtttcaagtttatcaaatttatttgtaggaataacattccttgaaatatatagatgtaaattttattc 13790090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 78 - 304
Target Start/End: Original strand, 14832540 - 14832762
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| |||||||||||  | |||||| ||| ||| |||||||||||||  ||||||||||| ||||||    ||        ||||||    
T  14832540 gtttgtttcaagtttaccaaatttatttccaagaataacattccttaaaatataaagatgataattttattcctagatat----ttagaaaaaatatgtt 14832635  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctcat 277  Q
    |||||| ||||||||||||| ||  |||||| ||| ||  |||| ||||||| |  ||  ||| ||||||||| |||||| ||  ||||||||||| ||     
T  14832636 tggttagctttataatattcctatgaaccataaaaataaggattataataggaaattacgtataaatttattctcatctcaatgagaactttattcccac 14832735  T
Q  278 cattttctttgggaaaaatattctatt 304  Q
    | ||||||||||||||| | |||||||    
T  14832736 ccttttctttgggaaaatttttctatt 14832762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 5003189 - 5003102
Alignment:
Q  66 aacttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||| |||||||| || |||| ||||||||||| ||||||||| ||| |||| ||||||||||||  ||||||||||||||    
T  5003189 aactaaaggtgtgtttgtttaaaatttaccaaatttatttataggaataacattccttggaatataaagatgcgaattttattccaag 5003102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 74 - 152
Target Start/End: Original strand, 4875501 - 4875579
Alignment:
Q  74 gtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaa 152  Q
    |||| ||||||| |||||| ||||||||||| ||||||||||||||  ||| ||||||||||||  |||||||||||||    
T  4875501 gtgcatttgtttcaagtttgtcaaatttattcttaggaataatattctttggaatataaagatgtgaattttattccaa 4875579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 208
Target Start/End: Complemental strand, 3254434 - 3254308
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||||||||||| ||||||||||||||||||||| |||  ||| |||||||| |||  |||||||||| |||     |||||        ||||||    
T  3254434 gtttgttttaagtttaccaaatttatttttaggaataacattctttggaatataaaaatgagaattttattctaag----gtatttagaaaaaatatgtt 3254339  T
Q  178 tggttaactttataatattcttagaaaccat 208  Q
    |||||||||| ||||||||| ||||||||||    
T  3254338 tggttaacttcataatattcctagaaaccat 3254308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 41298255 - 41298186
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttatt 148  Q
    |||||||||||| |||||||||||||||||||||||| |||  ||| ||||||||||||  |||||||||    
T  41298255 tttgttttaagtatatcaaatttatttttaggaataacattcattggaatataaagatgagaattttatt 41298186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 45212662 - 45212735
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaa 152  Q
    |||||||||| |||||||||||||||||||||||| | |||  ||||||| ||||||||  |||||||||||||    
T  45212662 tttgttttaaatttatcaaatttatttttaggaattacattctttgaaatgtaaagatgagaattttattccaa 45212735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 294
Target Start/End: Original strand, 1623206 - 1623325
Alignment:
Q  175 gtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattct 274  Q
    ||||| ||||||||||| ||||| ||| |||||| ||| |||||||| |||| |||| |||  ||||||||||||| ||| | ||||| ||||||||||     
T  1623206 gtttgattaactttatattattcgtaggaaccataaaaatagagattataattggtaactacatatgaatttattctcatattcattgaaactttattcc 1623305  T
Q  275 catcattttctttgggaaaa 294  Q
    |  ||| |||||||| ||||    
T  1623306 cgccatgttctttggaaaaa 1623325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 25444932 - 25444999
Alignment:
Q  81 tgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttatt 148  Q
    |||||||||||| ||||||||||||| |||||||| |||| ||| ||||||||||||  |||||||||    
T  25444932 tgttttaagtttgtcaaatttattttaaggaataacattttttggaatataaagatgataattttatt 25444999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 133
Target Start/End: Original strand, 25625054 - 25625109
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaa 133  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||| | |||||||    
T  25625054 gtttgttttaaatttatcaaatttatttttaggaataacatttcttaacatataaa 25625109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 45693918 - 45693993
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||||| ||||||| |||||||||| |||||||||| ||| |||| || |||||||||  ||||||||||||||    
T  45693918 gtttgtttcaagtttaccaaatttattcttaggaataacattccttggaacataaagatgagaattttattccaag 45693993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 11763733 - 11763667
Alignment:
Q  87 aagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    ||||||| |||||||||| |||||||||| ||| |||| ||||||||||||  ||||||||||||||    
T  11763733 aagtttaccaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaag 11763667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 72 - 150
Target Start/End: Original strand, 39819413 - 39819491
Alignment:
Q  72 aggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattcc 150  Q
    ||||| |||||||| || |||| ||||||||||  ||||||||| |||  ||| |||||||||||||||||||||||||    
T  39819413 aggtgtgtttgtttcaaatttaccaaatttattcataggaataacattctttggaatataaagatggaaattttattcc 39819491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 289
Target Start/End: Original strand, 37851678 - 37851794
Alignment:
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttatt 272  Q
    |||||| |||||| |||||||||| |||| || ||| ||| ||   ||| |||||||||  ||   |||||||||||| ||||| ||| |||||||||||    
T  37851678 atgtttagttaacattataatatttttaggaatcataaaaatatgaattataataggtagttacacatgaatttattctcatcttcatgggaactttatt 37851777  T
Q  273 ctcatcattttctttgg 289  Q
    |||| ||||||||||||    
T  37851778 ctcaccattttctttgg 37851794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 341
Target Start/End: Complemental strand, 39995232 - 39995196
Alignment:
Q  305 tccaggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||||||    
T  39995232 tccaggaataaaatttagtaaacttgtaacaaacata 39995196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 306 - 341
Target Start/End: Original strand, 2521646 - 2521681
Alignment:
Q  306 ccaggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||||||    
T  2521646 ccaggaataaaatttagtaaacttgtaacaaacata 2521681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 306 - 341
Target Start/End: Complemental strand, 21737500 - 21737465
Alignment:
Q  306 ccaggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||||||    
T  21737500 ccaggaataaaatttagtaaacttgtaacaaacata 21737465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 306 - 341
Target Start/End: Original strand, 37533923 - 37533958
Alignment:
Q  306 ccaggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||||||    
T  37533923 ccaggaataaaatttagtaaacttgtaacaaacata 37533958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 14253255 - 14253325
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttatt 148  Q
    ||||||||||| |||| ||||||||||||||||||||| |||  ||| ||||||| ||||  |||||||||    
T  14253255 gtttgttttaaatttaccaaatttatttttaggaataacattctttggaatataaggatgagaattttatt 14253325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 304
Target Start/End: Original strand, 45694075 - 45694140
Alignment:
Q  239 atgaatttattcacatctccattggaactttattctcatcattttctttgggaaaaatattctatt 304  Q
    |||||||||||  ||||||||| |||||||||||| || | ||||| ||||||||||| |||||||    
T  45694075 atgaatttattttcatctccatgggaactttattcccacccttttccttgggaaaaattttctatt 45694140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 2050840 - 2050872
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  2050840 ggaataaaatttagtaaacttgtaacaaacata 2050872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 5770207 - 5770175
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  5770207 ggaataaaatttagtaaacttgtaacaaacata 5770175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 6171765 - 6171797
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  6171765 ggaataaaatttagtaaacttgtaacaaacata 6171797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 11071579 - 11071611
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  11071579 ggaataaaatttagtaaacttgtaacaaacata 11071611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 11763576 - 11763480
Alignment:
Q  218 gattttaataggtatctatttatgaatttattcacatctccattggaactttattctcatcattttctttgggaaaaatattctatttccaggaata 314  Q
    |||| ||||||||| |||||||||||||||||| ||||| ||| | |||||||||| || | ||||| || |||||  | ||||||| |||| ||||    
T  11763576 gattataataggtaactatttatgaatttattctcatcttcatggaaactttattcccacctttttcctttggaaattttttctattcccagaaata 11763480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 14253496 - 14253528
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  14253496 ggaataaaatttagtaaacttgtaacaaacata 14253528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 14777595 - 14777563
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  14777595 ggaataaaatttagtaaacttgtaacaaacata 14777563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 18713754 - 18713722
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  18713754 ggaataaaatttagtaaacttgtaacaaacata 18713722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 27358060 - 27358028
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  27358060 ggaataaaatttagtaaacttgtaacaaacata 27358028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 37233403 - 37233435
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  37233403 ggaataaaatttagtaaacttgtaacaaacata 37233435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 41298168 - 41298048
Alignment:
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttatt 272  Q
    ||||||| ||||| |||||||||||  || |||||| | | |||||||| |||||||||  |||  |||||| ||||| ||||| |||  ||||||||||    
T  41298168 atgtttgtttaacattataatattccaaggaaccataagaatagagattataataggtaattataaatgaatatattctcatcttcatgagaactttatt 41298069  T
Q  273 ctcatcattttctttgggaaa 293  Q
    | || | ||| ||||||||||    
T  41298068 cacaccctttgctttgggaaa 41298048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 42674758 - 42674726
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  42674758 ggaataaaatttagtaaacttgtaacaaacata 42674726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 45694162 - 45694194
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  45694162 ggaataaaatttagtaaacttgtaacaaacata 45694194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 341
Target Start/End: Original strand, 3902431 - 3902462
Alignment:
Q  310 gaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||    
T  3902431 gaataaaatttagtaaacttgtaacaaacata 3902462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 341
Target Start/End: Original strand, 6571662 - 6571693
Alignment:
Q  310 gaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||    
T  6571662 gaataaaatttagtaaacttgtaacaaacata 6571693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 13539399 - 13539469
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    ||||||| ||||||| ||||||||||||| |  |||| |||||||| || |||||||||  ||||||||||    
T  13539399 tttgtttcaagtttaccaaatttatttttggtgataacatttcttggaacataaagatgagaattttattc 13539469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 341
Target Start/End: Complemental strand, 41729225 - 41729195
Alignment:
Q  311 aataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||    
T  41729225 aataaaatttagtaaacttgtaacaaacata 41729195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 295
Target Start/End: Complemental strand, 3254245 - 3254192
Alignment:
Q  242 aatttattcacatctccattggaactttattctcatcattttctttgggaaaaa 295  Q
    ||||||||| ||||| ||| |||||||||||| || ||||| ||||||||||||    
T  3254245 aatttattctcatcttcatgggaactttattcccaccatttcctttgggaaaaa 3254192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 341
Target Start/End: Complemental strand, 20426577 - 20426548
Alignment:
Q  312 ataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||    
T  20426577 ataaaatttagtaaacttgtaacaaacata 20426548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 115
Target Start/End: Complemental strand, 36590915 - 36590878
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataa 115  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  36590915 gtttgttttaagtttactaaatttatttttaggaataa 36590878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 41750502 - 41750535
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  41750502 aggaataaattttagtaaacttgtaacaaacata 41750535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 14832784 - 14832816
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||| |||||||||||    
T  14832784 ggaataaaatttagtaaacttttaacaaacata 14832816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 17965957 - 17965989
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||| ||||||||||||||||||||    
T  17965957 ggaataaaatttggtaaacttgtaacaaacata 17965989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 24499416 - 24499448
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||| |||||||||||    
T  24499416 ggaataaaatttagtaaacttataacaaacata 24499448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 39819670 - 39819702
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||| |||||||||||||||||||||||||||    
T  39819670 ggaatgaaatttagtaaacttgtaacaaacata 39819702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 7e-44; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 73 - 341
Target Start/End: Complemental strand, 48160920 - 48160656
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| |||||||  |||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  || |||          |    
T  48160920 ggtgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttat----gaaaaat 48160825  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatct-atttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  | |||||||||||||||| ||||||||| ||||||||||    
T  48160824 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaattatttatgaatttattcccatctccatgggaactttat 48160725  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaataaaatttagtaaacttgtaacaaacata 341  Q
    || || ||||||| |||| |||  | |||| || ||||||||||||||||||||||||||||||||||||    
T  48160724 tcccaccattttccttgg-aaattttttctcttcccaggaataaaatttagtaaacttgtaacaaacata 48160656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 72 - 312
Target Start/End: Complemental strand, 27419572 - 27419335
Alignment:
Q  72 aggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnn 171  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||   | | ||||            
T  27419572 aggtgtgtttgtttcaagtttaccaaatttatttttaggaataacatttcttggaatataaagatgggaattttattccaa---aga-atttagaaaaaa 27419477  T
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaacttta 270  Q
    |||||||||||| ||||||||||||| |||  ||||| ||| |||||||| |||||||||  |||||||||||||||||| ||||||||| |||||||||    
T  27419476 tatgtttggttagctttataatattcctagggaccataaaaatagagattataataggtaaactatttatgaatttattcccatctccatgggaacttta 27419377  T
Q  271 ttctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||| || | ||||| ||||||||  | ||||||| |||||||    
T  27419376 ttcccacccttttccttgggaaattttttctattcccaggaa 27419335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 78 - 273
Target Start/End: Complemental strand, 30686333 - 30686142
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||| |||||||||||| |||||||||| |||| |||    ||        ||||||    
T  30686333 gtttgttttaagtttatcaaatttatttctaggaataacattccttggaatataaagatgaaaattttattgcaaggtat----ttaggaaaaatatgtt 30686238  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattc 273  Q
    |||||||||||||||||||| ||| |||||| ||| ||| |||| ||||| ||| |||||||||||||||||| ||||||| | ||||||||||||    
T  30686237 tggttaactttataatattcctaggaaccataaaaatagcgattataataagtaactatttatgaatttattcccatctccctaggaactttattc 30686142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 78 - 312
Target Start/End: Original strand, 45045355 - 45045586
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| |||||||||| |||||||||||||| |||| ||||||||||||| ||||||||||||||  ||    ||        ||||||    
T  45045355 gtttgtttcaagtttaccaaatttattcttaggaataatattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaatatgtt 45045450  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| ||    
T  45045451 tggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttattccca 45045550  T
Q  277 tcattttctttgggaaaaatattctatttccaggaa 312  Q
     | ||||| ||||||||  | ||||||| |||||||    
T  45045551 cccttttccttgggaaattttttctattcccaggaa 45045586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 33378558 - 33378794
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  || |||          |    
T  33378558 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttat----gaaaaat 33378653  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  33378654 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 33378753  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || ||||||| ||||||||  | ||||||| |||||||    
T  33378754 tcccaccattttccttgggaaattttttctattcccaggaa 33378794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 45265395 - 45265159
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  45265395 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaat 45265300  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  45265299 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccatgggaactttat 45265200  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  45265199 tcccacccttttccttgggaaattttttctattcccaggaa 45265159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 78 - 293
Target Start/End: Complemental strand, 37534444 - 37534233
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||||||||||||||| ||| ||||| ||| |||| ||||||||||||  ||||||||| |||| |||    ||        ||||||    
T  37534444 gtttgtttcaagtttatcaaatttatttctagaaataacattccttggaatataaagatgagaattttatttcaaggtat----ttaggaaaaatatgtt 37534349  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctcat 277  Q
    |||||||||||||||||||||||| ||| || | | ||| |||| ||||| ||| |||||||||||||||||||||||||||| |||||||||||| ||     
T  37534348 tggttaactttataatattcttaggaactataataatagggattataataagtaactatttatgaatttattcacatctccatgggaactttattcccac 37534249  T
Q  278 cattttctttgggaaa 293  Q
    | ||||| ||||||||    
T  37534248 ccttttccttgggaaa 37534233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 68 - 293
Target Start/End: Original strand, 44565764 - 44565986
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||||||||||||||||||  ||    ||        
T  44565764 cttagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatggaaattttattccaaggaat----ttagga 44565859  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaac 266  Q
        |||||||||||| ||||||||||||| ||| |||||| ||| ||  |||| |||||||||  |||||||||||||||||| ||||||||| |||||    
T  44565860 aaaatatgtttggttagctttataatattcctaggaaccataaaaatatggattataataggtaaactatttatgaatttattctcatctccatgggaac 44565959  T
Q  267 tttattctcatcattttctttgggaaa 293  Q
    ||||||| || | ||||| ||||||||    
T  44565960 tttattcccacccttttccttgggaaa 44565986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 48341088 - 48341323
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| |||||||||| |||| ||||||||||||  || |||          |    
T  48341088 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagagggaa-ttttattccaaggaatttat----gaaaaat 48341182  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  48341183 atgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 48341282  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || ||||||| ||||||||  | ||||||| |||||||    
T  48341283 tcccaccattttccttgggaaattttttctattcccaggaa 48341323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 35488536 - 35488300
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  35488536 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaat 35488441  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  35488440 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccataggaactttat 35488341  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  35488340 tcccacccttttccttgggaaattttttctattcccaggaa 35488300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 9947338 - 9947101
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||| ||||||||| ||| |||| ||||||||||||| ||||||||||||||  || ||           |    
T  9947338 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttgtaatataaagatgggaattttattccaaggaatgta---gaaaaaaat 9947242  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  ||||||||||||||| || ||||||||| ||||||||||    
T  9947241 atgtttggttagctttataatattcataggaaccataaaaatagggattgtaataggtaaactatttatgaatttaatctcatctccatgggaactttat 9947142  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  9947141 tcccacccttttccttgggaaattttttctattcccaggaa 9947101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 27214202 - 27213966
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  || |||          |    
T  27214202 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttat----gaaaaat 27214107  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| |||  || |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  27214106 atgtttggttagctttataatattcctaggaaccataaaaacagggattataataggtaaactatttatgaatttattctcatctccataggaactttat 27214007  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  27214006 tcccacccttttccttgggaaattttttctattcccaggaa 27213966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 79 - 312
Target Start/End: Original strand, 43948975 - 43949205
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgttt 178  Q
    ||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |||||||    
T  43948975 tttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaatatgttt 43949070  T
Q  179 ggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctcat 277  Q
    ||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||| ||| |||||||||||| ||     
T  43949071 ggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatcttcatgggaactttattcccac 43949170  T
Q  278 cattttctttgggaaaaatattctatttccaggaa 312  Q
    | ||||| ||||||||  | |||||||||||||||    
T  43949171 ccttttccttgggaaattttttctatttccaggaa 43949205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 70 - 312
Target Start/End: Complemental strand, 34930817 - 34930578
Alignment:
Q  70 taaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnn 169  Q
    ||||||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  || |||            
T  34930817 taaggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttat----gaaa 34930722  T
Q  170 nntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactt 268  Q
      |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||| ||  |||||||||||||||||| ||||||||| |||||||    
T  34930721 aatatgtttggttagctttataatattcctaggaaccataaaaatagggattataatagataaactatttatgaatttattcccatctccatgggaactt 34930622  T
Q  269 tattctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||||| || | ||||  ||||||||  | ||||||| |||||||    
T  34930621 tattcccaccctttttcttgggaaattttttctattcccaggaa 34930578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 11329717 - 11329953
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        |    
T  11329717 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttaggaaaaat 11329812  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  11329813 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 11329912  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  11329913 tcccacccttttccttgggaaattttttctattcccaggaa 11329953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 78 - 293
Target Start/End: Original strand, 39553911 - 39554124
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| |||||||||||||||||| |||| ||||| ||| |||| ||||||||||||| ||||||||||||||  || ||           ||| ||    
T  39553911 gtttgtttgaagtttatcaaatttattcttagtaataacattccttggaatataaagatgggaattttattccaaggaattta---ggaaaaaatatttt 39554007  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| ||    
T  39554008 tggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttattccca 39554107  T
Q  277 tcattttctttgggaaa 293  Q
     | ||||| ||||||||    
T  39554108 cccttttccttgggaaa 39554124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 73 - 293
Target Start/End: Original strand, 48313846 - 48314063
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||| ||||||||| |||||||| ||||||||||||  |||||||||| |||  ||    ||        |    
T  48313846 ggtgtgtttgtttcaagtttatcaaatttatttctaggaataacatttcttggaatataaagatgagaattttattctaaggaat----ttaggaaaaat 48313941  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| |||||||||||||  || |||||| ||| ||| |||| ||||||| |  |||||||| ||||||||| ||||||||| ||||||||||    
T  48313942 atgtttggttagctttataatattccaaggaaccataaaaatagggattataataggaaaactatttataaatttattcccatctccatgggaactttat 48314041  T
Q  272 tctcatcattttctttgggaaa 293  Q
    || || ||||||| ||||||||    
T  48314042 tcccaccattttccttgggaaa 48314063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 78 - 293
Target Start/End: Original strand, 44819983 - 44820195
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||||||||||||| ||| ||| |||||||||||||  ||||||||||||||  ||    ||        ||| ||    
T  44819983 gtttgtttcaagtttaccaaatttatttttaggaataacattccttaaaatataaagatgagaattttattccaaggaat----ttaggaaaaatatatt 44820078  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| || | |||||||||  |||||||||||||||||| ||||||||| |||||||||||| ||    
T  44820079 tggttagctttataatattcctaggaaccataaaaatagggactataataggtaaactatttatgaatttattcccatctccatgggaactttattccca 44820178  T
Q  277 tcattttctttgggaaa 293  Q
     | ||||| ||||||||    
T  44820179 cccttttccttgggaaa 44820195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 87 - 283
Target Start/End: Original strand, 38543932 - 38544125
Alignment:
Q  87 aagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtttggttaact 186  Q
    |||||||  ||||||||| |||||||||| ||| |||| ||||||||||||  ||||||||||||||| ||    ||        |||||||||||| ||    
T  38543932 aagtttactaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaagaaat----ttaggaaaaatatgtttggttagct 38544027  T
Q  187 ttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctcatcatttt 283  Q
    ||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| || ||||||    
T  38544028 ttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccatgggaactttattcccaccatttt 38544125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 109 - 312
Target Start/End: Complemental strand, 8419900 - 8419700
Alignment:
Q  109 ggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtttggttaactttataatattcttagaaaccat 208  Q
    ||||||| ||| |||| ||||||||||||| ||||||||||||||| ||    ||        |||||||||||| ||||||||||||| ||| ||||||    
T  8419900 ggaataacattccttggaatataaagatgggaattttattccaagaaat----ttaggaaaaatatgtttggttagctttataatattcctaggaaccat 8419805  T
Q  209 gaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctcatcattttctttgggaaaaatattctatttcc 307  Q
     ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| || | ||||| ||||||||  | ||||||| ||    
T  8419804 aaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttattcccacccttttccttgggaaattttttctattccc 8419705  T
Q  308 aggaa 312  Q
    |||||    
T  8419704 aggaa 8419700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 78 - 312
Target Start/End: Original strand, 25097797 - 25098029
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttctt-gaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgt 176  Q
    |||||||||||||||| ||||||||||  |||||||||||||| || | ||||||||||||  ||||||||||||||  ||    ||        |||||    
T  25097797 gtttgttttaagtttaccaaatttattcctaggaataatatttttttggaatataaagatgagaattttattccaaggaat----ttaggaaaaatatgt 25097892  T
Q  177 ttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctc 275  Q
    ||||||| ||||||||||||| ||| |||||| ||  ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| |    
T  25097893 ttggttagctttataatattcctaggaaccataaatatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttattccc 25097992  T
Q  276 atcattttctttgggaaaaatattctatttccaggaa 312  Q
    | | ||||| || |||||  | ||||||| |||||||    
T  25097993 acccttttccttaggaaattttttctattcccaggaa 25098029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 28904533 - 28904336
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  |||||||||| |||  ||    ||        |    
T  28904533 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattctaaggaat----ttaggaaaaat 28904438  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||||||||||||||||| ||| |||||| ||| ||  |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  28904437 atgtttggttaactttataatattcctaggaaccataaaaatatggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 28904338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 78 - 293
Target Start/End: Original strand, 27248022 - 27248234
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||| ||| |||  ||||||||||||| ||||||||||||||  ||    ||        ||||||    
T  27248022 gtttgtttcaagtttaccaaatttattcctaggaataacattccttagaatataaagatgggaattttattccaaggaat----ttaggaaaaatatgtt 27248117  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||||||||| ||  ||| || ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| ||    
T  27248118 tggttagctttataatattcctatgaactataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttattccca 27248217  T
Q  277 tcattttctttgggaaa 293  Q
     | ||||| ||||||||    
T  27248218 cccttttccttgggaaa 27248234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 87 - 304
Target Start/End: Original strand, 45722897 - 45723101
Alignment:
Q  87 aagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtttggttaact 186  Q
    ||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| | |             |||||||  ||||||    
T  45722897 aagtttaccaaatttatttttaggaataacattccttgaaatataaagatggaaattttattcc-agaaaaa------------atatgtttaattaact 45722983  T
Q  187 ttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctcatcattttctt 286  Q
    ||||||||||| |||||| ||| ||| ||  |||| ||||||||| |||||||||||||||||   || | ||| |||||||||||| || ||||||  |    
T  45722984 ttataatattcctagaaatcataaaaatatggattataataggtaactatttatgaatttatttctattttcatgggaactttattcccaccatttttct 45723083  T
Q  287 tgggaaaaatattctatt 304  Q
    |||||||| | |||||||    
T  45723084 tgggaaaatttttctatt 45723101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 172 - 309
Target Start/End: Complemental strand, 6656722 - 6656585
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||| |||||||||||||||||  ||  |||||  ||| || ||||| ||||||||| |||||||||| ||||||| ||||||||| ||||||||||    
T  6656722 tatgttttgttaactttataatatttctaagaaccaaaaaaatatagattataataggtaactatttatgactttattcccatctccatgggaactttat 6656623  T
Q  272 tctcatcattttctttgggaaaaatattctatttccag 309  Q
    || |||  ||||| ||||||||| | ||||||| ||||    
T  6656622 tcccatatttttcattgggaaaacttttctattcccag 6656585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 172 - 312
Target Start/End: Complemental strand, 38396618 - 38396477
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatct-atttatgaatttattcacatctccattggaacttta 270  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| ||||||| |  | |||||||||||||||| ||||||| | |||||||||    
T  38396618 tatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggaaaattatttatgaatttattcccatctccgtgggaacttta 38396519  T
Q  271 ttctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||| || ||||||| ||||||||  | ||||||| |||||||    
T  38396518 ttcccaccattttccttgggaaattttttctattcccaggaa 38396477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 185 - 312
Target Start/End: Complemental strand, 16825593 - 16825465
Alignment:
Q  185 ctttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctcatcatttt 283  Q
    ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| || | ||||    
T  16825593 ctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttattcccaccctttt 16825494  T
Q  284 ctttgggaaaaatattctatttccaggaa 312  Q
    | ||||||||  | ||||||| |||||||    
T  16825493 ccttgggaaattttttctattcccaggaa 16825465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 25924984 - 25924748
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| | ||||| ||||||||||  || |||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        |    
T  25924984 ggtgtgtttgtttcatgtttaccaaatttattcctaagaataacattccttggaatataaagatgagaattttattccaaggaat----ttaggaaaaat 25924889  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||  |||| |||||||||  |||||||||||||||||| |||||| || ||||||||||    
T  25924888 atgtttggttagctttataatattcctaggaaccataaaaatatggattataataggtaaactatttatgaatttattctcatctctatgggaactttat 25924789  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| | ||||||  | ||||||| |||||||    
T  25924788 tcccacccttttcctggggaaattttttctattcccaggaa 25924748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 172 - 312
Target Start/End: Complemental strand, 9814466 - 9814325
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaacttta 270  Q
    |||||||| ||| ||||||||||||| ||| |||||| ||| |||||||| |||||| ||  |||||||||||||||||| |||||||||  ||||||||    
T  9814466 tatgtttgattagctttataatattcctaggaaccataaaaatagagattataatagataaactatttatgaatttattcccatctccatgagaacttta 9814367  T
Q  271 ttctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||| || | ||||  ||||||||  | ||||||| |||||||    
T  9814366 ttcccaccctttttcttgggaaattttttctattcccaggaa 9814325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 172 - 312
Target Start/End: Original strand, 40212708 - 40212849
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaacttta 270  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||| ||  |||||||||||||||||| |||||||||  ||||||||    
T  40212708 tatgtttggttagctttataatattcctaggaaccataaaaatagggattataatagataaactatttatgaatttattcccatctccatgagaacttta 40212807  T
Q  271 ttctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||| || | ||||  ||||||||  | ||||||| |||||||    
T  40212808 ttcccaccctttttcttgggaaattttttctattcccaggaa 40212849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 172 - 304
Target Start/End: Complemental strand, 41684273 - 41684141
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||||| |||||||||||  ||| |||||| ||| |||||||| ||||||||| |||  ||| ||||||||  |||||||||  |||||||||    
T  41684273 tatgtttggttaattttataatatttataggaaccataaaaatagagattataataggtaactacatataaatttattttcatctccatgagaactttat 41684174  T
Q  272 tctcatcattttctttgggaaaaatattctatt 304  Q
    || ||   ||||||||||| ||||| |||||||    
T  41684173 tcccactcttttctttgggcaaaattttctatt 41684141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 31598452 - 31598527
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||| ||||||||||| | ||||||||| ||||    
T  31598452 gtttgttttaagtttaccaaatttatttttgggaataacatttcttggaatataaagataggaattttatttcaag 31598527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 273
Target Start/End: Complemental strand, 41632616 - 41632514
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaacttta 270  Q
    |||||||||||| ||||||||||||| ||  |||||| ||| ||  |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||    
T  41632616 tatgtttggttagctttataatattcctatgaaccataaaaatatggattataataggtaaactatttatgaatttattctcatctccatgggaacttta 41632517  T
Q  271 ttc 273  Q
    |||    
T  41632516 ttc 41632514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 45448666 - 45448902
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  || |||||| ||| |||| ||||||||||||| |||||||||| ||   | | ||||        |    
T  45448666 ggtgtgtttgtttcaagtttaccaaatttattcctatgaataacattccttggaatataaagatgggaattttattctaa---aga-atttaggaaaaat 45448761  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||  |||| |||||| ||  |||||||||||||||||| | |||| || ||||||||||    
T  45448762 atgtttggttagctttataatattcctaggaaccataaaaataaggattataatagataaactatttatgaatttattcccctctctatgggaactttat 45448861  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||  ||||||||  | ||||||| |||||||    
T  45448862 tcccaccctttttcttgggaaattttttctattcccaggaa 45448902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 189 - 314
Target Start/End: Complemental strand, 6656457 - 6656332
Alignment:
Q  189 ataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctcatcattttctttg 288  Q
    ||||||||||||| |||||  ||| || ||||| ||||||||| |||||||||| ||||||| ||||||||| | |||||||||  || | ||||  |||    
T  6656457 ataatattcttaggaaccaaaaaaatacagattataataggtaactatttatgattttattcccatctccatggaaactttatttccaccctttttattg 6656358  T
Q  289 ggaaaaatattctatttccaggaata 314  Q
    |||||| | |||||||||||| ||||    
T  6656357 ggaaaacttttctatttccagaaata 6656332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 22156520 - 22156438
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatata 160  Q
    |||||||| || |||||||||||||||||||||||||| |||| ||| |||||||||||   |||||||||| ||| ||||||    
T  22156520 gtttgtttcaaatttatcaaatttatttttaggaataacattttttggaatataaagataagaattttattctaaggtatata 22156438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 22212435 - 22212353
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatata 160  Q
    |||||||| || |||||||||||||||||||||||||| |||| ||| |||||||||||   |||||||||| ||| ||||||    
T  22212435 gtttgtttcaaatttatcaaatttatttttaggaataacattttttggaatataaagataagaattttattctaaggtatata 22212353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 172 - 289
Target Start/End: Complemental strand, 31921976 - 31921861
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||| |||||||||||||||||||  ||| |||||| ||| |||| ||| |||||||   |||| ||||||||||||| |||||| || ||||||||||    
T  31921976 tatgtatggttaactttataatatttctaggaaccataaaaatagacattataatagga--ctatatatgaatttattctcatctctatgggaactttat 31921879  T
Q  272 tctcatcattttctttgg 289  Q
    || || | ||||||||||    
T  31921878 tcccacccttttctttgg 31921861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 73 - 157
Target Start/End: Complemental strand, 17276506 - 17276422
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatat 157  Q
    |||| |||||||| || ||||  |||||||||| ||||||||| ||| |||| |||||| ||||| |||||||||||||||||||    
T  17276506 ggtgtgtttgtttcaattttacaaaatttatttctaggaataacattccttggaatatatagatgtaaattttattccaagatat 17276422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 255
Target Start/End: Complemental strand, 43569936 - 43569853
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatc 255  Q
    |||||||| |||||||||||||||| ||||||| ||| ||| ||| |||| |||||| ||  |||||||||||||||| |||||    
T  43569936 tatgtttgattaactttataatatttttagaaatcataaaaatagggattataatagataattatttatgaatttatttacatc 43569853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 218 - 304
Target Start/End: Original strand, 18824012 - 18824097
Alignment:
Q  218 gattttaataggtatctatttatgaatttattcacatctccattggaactttattctcatcattttctttgggaaaaatattctatt 304  Q
    |||| |||||||||  ||||||||||||||||| |||||||| ||||||||||||| || | ||||| ||||||||| | |||||||    
T  18824012 gattataataggtaattatttatgaatttattcccatctcca-tggaactttattcccacctttttccttgggaaaatttttctatt 18824097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 25045837 - 25045728
Alignment:
Q  203 aaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctcatcattttctttgggaaaaatattcta 302  Q
    |||||||||| ||  |||| ||||| |||  ||||||||||||||||| ||||||||| |||||||||||| || | ||||| ||  ||||| | |||||    
T  25045837 aaccatgaaaatatggattataatatgtaattatttatgaatttattcccatctccatgggaactttattcccacccttttccttacgaaaatttttcta 25045738  T
Q  303 tttccaggaa 312  Q
    || |||||||    
T  25045737 ttcccaggaa 25045728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 133
Target Start/End: Original strand, 24769243 - 24769298
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaa 133  Q
    |||||||| || ||||||||||||||||||| ||||||||||| || |||||||||    
T  24769243 gtttgtttgaaatttatcaaatttatttttaagaataatattttttaaaatataaa 24769298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 306 - 341
Target Start/End: Original strand, 33378813 - 33378848
Alignment:
Q  306 ccaggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||||||    
T  33378813 ccaggaataaaatttagtaaacttgtaacaaacata 33378848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 342
Target Start/End: Complemental strand, 5543227 - 5543195
Alignment:
Q  310 gaataaaatttagtaaacttgtaacaaacataa 342  Q
    |||||||||||||||||||||||||||||||||    
T  5543227 gaataaaatttagtaaacttgtaacaaacataa 5543195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 5543477 - 5543401
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||| |||||||||||||||| ||||||||||| || |||||  |||  |||||| |||||||||  ||||||||||    
T  5543477 ggtgtgtttgttttaagtttaccaaatttatttctaagaatatcattatttgaaacataaagatgagaattttattc 5543401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 9947087 - 9947055
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  9947087 ggaataaaatttagtaaacttgtaacaaacata 9947055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 314
Target Start/End: Original strand, 11000588 - 11000664
Alignment:
Q  238 tatgaatttattcacatctccattggaactttattctcatcattttctttgggaaaaatattctatttccaggaata 314  Q
    ||||||||||||| ||| | ||| |||||||||||| || | ||||||||||||||| | ||||||| ||| |||||    
T  11000588 tatgaatttattctcatatgcatgggaactttattcccacccttttctttgggaaaatttttctattcccaagaata 11000664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 11000676 - 11000708
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  11000676 ggaataaaatttagtaaacttgtaacaaacata 11000708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 25045714 - 25045682
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  25045714 ggaataaaatttagtaaacttgtaacaaacata 25045682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 27248267 - 27248299
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  27248267 ggaataaaatttagtaaacttgtaacaaacata 27248299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 30686089 - 30686057
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  30686089 ggaataaaatttagtaaacttgtaacaaacata 30686057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 35488286 - 35488254
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  35488286 ggaataaaatttagtaaacttgtaacaaacata 35488254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 40212863 - 40212895
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  40212863 ggaataaaatttagtaaacttgtaacaaacata 40212895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 45440881 - 45440913
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  45440881 ggaataaaatttagtaaacttgtaacaaacata 45440913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 45448916 - 45448948
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  45448916 ggaataaaatttagtaaacttgtaacaaacata 45448948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 18823891 - 18823962
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||||||| ||||||| ||||||||||  ||||||||| |||  ||| ||||||||||||  ||||||||||    
T  18823891 gtttgtttcaagtttaccaaatttattcctaggaataacattctttggaatataaagatgagaattttattc 18823962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 342
Target Start/End: Complemental strand, 41684117 - 41684086
Alignment:
Q  311 aataaaatttagtaaacttgtaacaaacataa 342  Q
    ||||||||||||||||||||||||||||||||    
T  41684117 aataaaatttagtaaacttgtaacaaacataa 41684086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 341
Target Start/End: Complemental strand, 10902745 - 10902715
Alignment:
Q  311 aataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||    
T  10902745 aataaaatttagtaaacttgtaacaaacata 10902715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 344
Target Start/End: Complemental strand, 38528803 - 38528769
Alignment:
Q  310 gaataaaatttagtaaacttgtaacaaacataagc 344  Q
    ||||||||| |||||||||||||||||||||||||    
T  38528803 gaataaaatctagtaaacttgtaacaaacataagc 38528769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 43446062 - 43446012
Alignment:
Q  244 tttattcacatctccattggaactttattctcatcattttctttgggaaaa 294  Q
    ||||||| |||||||||  ||||||||||| || |||||||||||||||||    
T  43446062 tttattctcatctccatgagaactttattcccaccattttctttgggaaaa 43446012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 11329966 - 11329999
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  11329966 aggaataaattttagtaaacttgtaacaaacata 11329999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 340
Target Start/End: Original strand, 25098045 - 25098074
Alignment:
Q  311 aataaaatttagtaaacttgtaacaaacat 340  Q
    ||||||||||||||||||||||||||||||    
T  25098045 aataaaatttagtaaacttgtaacaaacat 25098074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 28904284 - 28904251
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  28904284 aggaataaattttagtaaacttgtaacaaacata 28904251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 344
Target Start/End: Original strand, 31598653 - 31598686
Alignment:
Q  311 aataaaatttagtaaacttgtaacaaacataagc 344  Q
    ||||||||||||||||||||||||||| ||||||    
T  31598653 aataaaatttagtaaacttgtaacaaatataagc 31598686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 39554156 - 39554189
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  39554156 aggaataaattttagtaaacttgtaacaaacata 39554189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 40385960 - 40385899
Alignment:
Q  87 aagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttatt 148  Q
    |||| ||||||||||||| |||| ||||| |||| ||| ||||||||||||  |||||||||    
T  40385960 aagtgtatcaaatttattcttagtaataacattttttggaatataaagatgagaattttatt 40385899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 43949218 - 43949251
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  43949218 aggaataaattttagtaaacttgtaacaaacata 43949251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 294
Target Start/End: Original strand, 45440728 - 45440849
Alignment:
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttatt 272  Q
    ||||||| ||||| |||||||||||  || |||| | ||| ||| |||| |||||||||  |||  |||| ||| ||| |||||||||  ||||||||||    
T  45440728 atgtttgattaacattataatattccaagtaaccttaaaactagggattataataggtaattatacatgatttttttcccatctccatgagaactttatt 45440827  T
Q  273 ctcatcattttctttgggaaaa 294  Q
    | ||  | ||||||||||||||    
T  45440828 cccactactttctttgggaaaa 45440849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 18824119 - 18824151
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||| |||||||||||||||||    
T  18824119 ggaataaaatttagtgaacttgtaacaaacata 18824151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 38396712 - 38396633
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||||| ||||||||||||||||||  ||||||||  |||  ||| ||||| ||||| | ||||||||||||||    
T  38396712 ggtgtgtttgtttcaagtttatcaaatttattcctaggaatagcattcattggaatat-aagataggaattttattccaag 38396633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 44566019 - 44566051
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||| |||||||||||||||||||    
T  44566019 ggaataaaatttaataaacttgtaacaaacata 44566051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 45723123 - 45723155
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||| |||||||||    
T  45723123 ggaataaaatttagtaaacttgtgacaaacata 45723155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 48314096 - 48314128
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||| |||||||||||    
T  48314096 ggaataaaatttagtaaacttctaacaaacata 48314128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 48341336 - 48341368
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||| |||||||||||||||||||    
T  48341336 ggaataaaatttaataaacttgtaacaaacata 48341368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 7e-44; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 69 - 304
Target Start/End: Original strand, 27480731 - 27480961
Alignment:
Q  69 ttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnn 168  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||     |||||         
T  27480731 ttaaggtgtgtttattttaagtttaccaaatttatttttaggaataatatttcttgaaatataaagatgagaattttatttcaag----gtatttagaaa 27480826  T
Q  169 nnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactt 268  Q
       |||| ||||||||||||||||||||  ||  |||||| ||| |||| ||| ||||||||| |||||||||||||||||| ||||||||| | |||||    
T  27480827 aaatatgcttggttaactttataatatttctatgaaccataaaaatagaaattataataggtagctatttatgaatttattctcatctccatggaaactt 27480926  T
Q  269 tattctcatcattttctttgggaaaaatattctatt 304  Q
    |||||||| | ||||| |||| |||||| |||||||    
T  27480927 tattctca-ccttttccttggaaaaaattttctatt 27480961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 68 - 312
Target Start/End: Original strand, 8406613 - 8406854
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||||||||||||||| ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        
T  8406613 cttagggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttagga 8406708  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaatagg-tatctatttatgaatttattcacatctccattggaac 266  Q
        |||||||||||| |||||||||||||  || |||||  ||| ||| |||| |||||||  | |||||||||||||||||| ||||||||| |||||    
T  8406709 aaaatatgtttggttagctttataatattccaaggaaccaaaaaaatagggattataataggaaaactatttatgaatttattcccatctccatgggaac 8406808  T
Q  267 tttattctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||||||| || ||||||| ||||||||  | ||||||| |||||||    
T  8406809 tttattcccaccattttccttgggaaattttttctattcccaggaa 8406854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 22936259 - 22936023
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  22936259 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaat 22936164  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  22936163 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 22936064  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  22936063 tcccacccttttccttgggaaattttttctattcccaggaa 22936023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 66 - 312
Target Start/End: Original strand, 18411926 - 18412169
Alignment:
Q  66 aacttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnn 165  Q
    |||||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||      
T  18411926 aacttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttag 18412021  T
Q  166 nnnnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattgga 264  Q
          |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||    
T  18412022 gaaaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccatggga 18412121  T
Q  265 actttattctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||||||||| || | ||||| ||||||||  | ||||||| |||||||    
T  18412122 actttattcccacctttttccttgggaaattttttctattcccaggaa 18412169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 73 - 293
Target Start/End: Original strand, 28602280 - 28602497
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||||||||||||| ||| |||| ||||||||||| | ||||||||||||||  ||    ||        |    
T  28602280 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttggaatataaagataggaattttattccaaggaat----ttaggaaaaat 28602375  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| ||||||  || ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  28602376 atgtttggttagctttataatattcctaggaaccatacaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 28602475  T
Q  272 tctcatcattttctttgggaaa 293  Q
    || || | ||||| ||||||||    
T  28602476 tcccacccttttccttgggaaa 28602497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 78 - 312
Target Start/End: Complemental strand, 11855997 - 11855766
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        ||||||    
T  11855997 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttaggaaaaatatgtt 11855902  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| | |||||||||| ||    
T  11855901 tggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatggaaactttattccca 11855802  T
Q  277 tcattttctttgggaaaaatattctatttccaggaa 312  Q
     | ||||| ||||||||  | ||||||| |||||||    
T  11855801 cccttttccttgggaaattttttctattcccaggaa 11855766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 78 - 312
Target Start/End: Complemental strand, 19065847 - 19065616
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        ||||||    
T  19065847 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttagaaaatatatgtt 19065752  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||||||||| ||| |||||| ||  ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| ||    
T  19065751 tggttagctttataatattcctaggaaccataaatatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttattccca 19065652  T
Q  277 tcattttctttgggaaaaatattctatttccaggaa 312  Q
     | ||||| ||||||||  | ||||||| |||||||    
T  19065651 cccttttccttgggaaattttttctattcccaggaa 19065616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 72 - 293
Target Start/End: Complemental strand, 556054 - 555836
Alignment:
Q  72 aggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnn 171  Q
    ||||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||            
T  556054 aggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaa 555959  T
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaacttta 270  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| | |||||||    
T  555958 tatgtttggttagctttataatattcctaggaaccatcaaattagggattataataggtaaactatttatgaatttattcccatctccatggaaacttta 555859  T
Q  271 ttctcatcattttctttgggaaa 293  Q
    ||| || | ||||| ||||||||    
T  555858 ttcccacccttttccttgggaaa 555836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 68 - 312
Target Start/End: Complemental strand, 4765912 - 4765671
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  |||||||||| |||  ||    ||        
T  4765912 cttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattctaaggaat----ttagga 4765817  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaac 266  Q
        |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||    
T  4765816 aaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaac 4765717  T
Q  267 tttattctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||||||| || | ||||| ||||||||  | ||||||| |||||||    
T  4765716 tttattcccacccttttccttgggaaattttttctattcccaggaa 4765671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 12970877 - 12970680
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||| ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        |    
T  12970877 ggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttaggaaaaat 12970782  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | |||||||||||||||||| ||||||||| | ||||||||    
T  12970781 atgtttggttagctttataatattcataggaaccataaaaatagggattgtaataggtaaactatttatgaatttattcccatctccatggaaactttat 12970682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 73 - 337
Target Start/End: Complemental strand, 26637368 - 26637112
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||| ||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||||| ||||||||||||||     |||||        |    
T  26637368 ggtgtgtttatttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaag----gtatttagaaaaaat 26637273  T
Q  173 atgtttggttaactttataatattcttagaaaccat-gaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttat 271  Q
     |||||||||||||||||||||||| ||| ||||||  ||| ||  |||| |||||||||  ||  | ||||||||||| ||| ||||| |||||||       
T  26637272 gtgtttggttaactttataatattcctaggaaccataaaaaatatggattataataggtagttacatttgaatttattctcatatccataggaactt--- 26637176  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaataaaatttagtaaacttgtaacaaa 337  Q
      ||| | |||||| |  ||||  | ||||||||||||||||||||||||||||||||||||||||    
T  26637175 --tcacccttttctctcagaaattttttctatttccaggaataaaatttagtaaacttgtaacaaa 26637112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 29543362 - 29543165
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  29543362 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttagaaaaaat 29543267  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  29543266 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccatgggaactttat 29543167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 78 - 304
Target Start/End: Original strand, 1664460 - 1664682
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  |  ||||||||||||||||||||||||||||  ||||||||| |||| |||    ||        ||||||    
T  1664460 gtttgtttcaagtttaccaaatttattcctgagaataatatttcttgaaatataaagatgagaattttatttcaaggtat----ttagaaaaaatatgtt 1664555  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctcat 277  Q
    |||||||||||||||||||||||  |||||| ||| ||| |||| ||||||||| |||  ||| ||||||||| ||||||||| |||| || |||| ||     
T  1664556 tggttaactttataatattcttatgaaccataaaaatagggattataataggtaactacatataaatttattctcatctccatgggaatttaattcccac 1664655  T
Q  278 cattttctttgggaaaaatattctatt 304  Q
    |  |||||||||||||||  |||||||    
T  1664656 ccgtttctttgggaaaaaatttctatt 1664682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 78 - 314
Target Start/End: Original strand, 27481086 - 27481319
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        ||||||    
T  27481086 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttaggaaaaatatgtt 27481181  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||||||||| ||| |||||| ||| |||||||| ||||| |||  |||||||||||||||||| ||||| ||| |||||||||||| ||    
T  27481182 tggttagctttataatattcctaggaaccataaaaatagagattataatatgtaaactatttatgaatttattctcatcttcatgggaactttattccca 27481281  T
Q  277 tcattttctttgggaaaaatattctatttccaggaata 314  Q
     | ||||| |||||||| || || ||||  ||||||||    
T  27481282 cccttttccttgggaaatattttttattctcaggaata 27481319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 32535661 - 32535858
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| |||||||||| |||||||||| ||| |||| ||||||||||||| ||||||| ||||||  ||    ||        |    
T  32535661 ggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttaatccaaggaat----ttaggaaaaat 32535756  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| |||||||||||||| || |||||| ||| ||| | || |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  32535757 atgtttggttagctttataatattctcaggaaccataaaaataggggttataataggtaaactatttatgaatttattcccatctccatgggaactttat 32535856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 14207073 - 14206951
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaacttta 270  Q
    |||||||||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||    
T  14207073 tatgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaacttta 14206974  T
Q  271 ttctcatcattttctttgggaaa 293  Q
    ||| || | ||||| ||||||||    
T  14206973 ttcccacccttttccttgggaaa 14206951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 73 - 304
Target Start/End: Original strand, 6091439 - 6091667
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        |    
T  6091439 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttaggaaaaat 6091534  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatct-atttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| |||  ||| |||||||||  | |||||||||||||||| ||||||||| ||||||||||    
T  6091535 atgtttggttagctttataatattcctaggaaccataaaaataggaattataataggtaaattatttatgaatttattctcatctccatgggaactttat 6091634  T
Q  272 tctcatcattttctttgggaaaaatattctatt 304  Q
    || ||   ||||| ||||||||| | |||||||    
T  6091635 tcccactcttttccttgggaaaatttttctatt 6091667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 172 - 312
Target Start/End: Original strand, 36703693 - 36703834
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaacttta 270  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||    
T  36703693 tatgtttggttagctttataatattcctaggaaccatcaaaatagggattataataggtaaactatttatgaatttattctcatctccataggaacttta 36703792  T
Q  271 ttctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||| || | ||||  ||||||||  | ||||||| |||||||    
T  36703793 ttcccaccctttttcttgggaaattttttctattcccaggaa 36703834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 73 - 293
Target Start/End: Original strand, 6930366 - 6930582
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||||||||||||||||||||||  || |||||| ||| |||||||||| ||||||  |||||||||  ||| |||    ||        |    
T  6930366 ggtgtgtttgttttaagtttatcaaatttattcatatgaataacattccttgaaatatcaagatgagaattttattttaaggtat----ttaaaaaaaat 6930461  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttatt 272  Q
    ||||||||||||||||||||||||| |||||||| |  |  |||||||| |||||| || |||  ||| ||||||||  ||||| ||| |||||||||||    
T  6930462 atgtttggttaactttataatattcctagaaaccttacagatagagattataatagataactagatataaatttatttccatcttcatgggaactttatt 6930561  T
Q  273 ctcatcattttctttgggaaa 293  Q
    | ||  |||||||||||||||    
T  6930562 cccacaattttctttgggaaa 6930582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 78 - 312
Target Start/End: Complemental strand, 8646732 - 8646502
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| |||||||  |||||||||  ||||||||| ||| |||| ||||||||||| | ||||||||||||||  ||    ||        ||||||    
T  8646732 gtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagataggaattttattccaaggaat----ttaggaaaattatgtt 8646637  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatct-atttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||| ||||| ||| |||||| ||| ||| |||| |||||||||  | |||||||||||||||| ||||||||| |||||||||||| ||    
T  8646636 tggttagctttata-tattcctaggaaccataaaaatagggattataataggtaaattatttatgaatttattctcatctccatgggaactttattccca 8646538  T
Q  277 tcattttctttgggaaaaatattctatttccaggaa 312  Q
     | ||||| ||||||||  | ||||||| |||||||    
T  8646537 cccttttccttgggaaattttttctattcccaggaa 8646502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 78 - 145
Target Start/End: Original strand, 20962289 - 20962356
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaatttt 145  Q
    |||||||||||||||||||||||||||  ||||||||| ||| |||| || |||||||||||||||||    
T  20962289 gtttgttttaagtttatcaaatttattcataggaataacattccttggaacataaagatggaaatttt 20962356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 28429452 - 28429531
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaa 152  Q
    |||| |||||||| ||||||| ||||||||||| ||| ||||| ||| |||||||||||||||||  |||||||||||||    
T  28429452 ggtgtgtttgtttcaagtttaccaaatttatttctagaaataacattccttgaaatataaagatgtgaattttattccaa 28429531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 244 - 314
Target Start/End: Complemental strand, 40275934 - 40275864
Alignment:
Q  244 tttattcacatctccattggaactttattctcatcattttctttgggaaaaatattctatttccaggaata 314  Q
    ||||||| ||||| ||| |||||||||||| |||||||||||||||||||| | ||||||| |||||||||    
T  40275934 tttattcccatcttcatgggaactttattcccatcattttctttgggaaaacttttctattcccaggaata 40275864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 31583401 - 31583322
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatat 157  Q
    ||||||||||||||||  |||||||||| || |||||| |||  |||||| |||||||||||||| ||||| ||||||||    
T  31583401 gtttgttttaagtttactaaatttatttctacgaataacattctttgaaacataaagatggaaatattatttcaagatat 31583322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 145
Target Start/End: Complemental strand, 42012526 - 42012459
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaatttt 145  Q
    |||||||| |||||||  |||||||||||||||||||| |||| ||| |||| |||||||| ||||||    
T  42012526 gtttgtttcaagtttactaaatttatttttaggaataacattttttggaataaaaagatgggaatttt 42012459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 341
Target Start/End: Original strand, 27480981 - 27481015
Alignment:
Q  307 caggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||||    
T  27480981 caggaataaaatttagtaaacttgtaacaaacata 27481015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 30899514 - 30899564
Alignment:
Q  294 aatattctatttccaggaataaaatttagtaaacttgtaacaaacataagc 344  Q
    |||||| ||| |||||||||||||||||| |||||||||||| ||||||||    
T  30899514 aatattttatatccaggaataaaatttagaaaacttgtaacatacataagc 30899564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 35603094 - 35603045
Alignment:
Q  100 ttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||||||||||||||| |||| ||| ||||||||||| ||||||||||||    
T  35603094 ttatttttaggaataacattttttggaatataaagatagaaattttattc 35603045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 8646488 - 8646456
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  8646488 ggaataaaatttagtaaacttgtaacaaacata 8646456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 11855752 - 11855720
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  11855752 ggaataaaatttagtaaacttgtaacaaacata 11855720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 12970627 - 12970595
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  12970627 ggaataaaatttagtaaacttgtaacaaacata 12970595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 17251634 - 17251753
Alignment:
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttatt 272  Q
    ||||||||||||| || |||||||| ||||| |||| ||| ||| |||| |||||  ||  ||   |||||||||||  ||||| ||| | |||||||||    
T  17251634 atgtttggttaacattttaatattcctagaa-ccataaaaatagggattataatatatagttacacatgaatttattttcatcttcatggaaactttatt 17251732  T
Q  273 ctcatcattttctttgggaaa 293  Q
    | |||||||||||||||||||    
T  17251733 cccatcattttctttgggaaa 17251753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 27481331 - 27481363
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  27481331 ggaataaaatttagtaaacttgtaacaaacata 27481363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 28602529 - 28602561
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  28602529 ggaataaaatttagtaaacttgtaacaaacata 28602561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 29543112 - 29543080
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  29543112 ggaataaaatttagtaaacttgtaacaaacata 29543080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 31583159 - 31583127
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  31583159 ggaataaaatttagtaaacttgtaacaaacata 31583127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 342
Target Start/End: Original strand, 6930616 - 6930647
Alignment:
Q  311 aataaaatttagtaaacttgtaacaaacataa 342  Q
    ||||||||||||||||||||||||||||||||    
T  6930616 aataaaatttagtaaacttgtaacaaacataa 6930647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 341
Target Start/End: Original strand, 18412184 - 18412215
Alignment:
Q  310 gaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||    
T  18412184 gaataaaatttagtaaacttgtaacaaacata 18412215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 341
Target Start/End: Original strand, 20962565 - 20962596
Alignment:
Q  310 gaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||    
T  20962565 gaataaaatttagtaaacttgtaacaaacata 20962596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 341
Target Start/End: Complemental strand, 19065600 - 19065570
Alignment:
Q  311 aataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||    
T  19065600 aataaaatttagtaaacttgtaacaaacata 19065570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 35348707 - 35348653
Alignment:
Q  240 tgaatttattcacatctccattggaactttattctcatcattttctttgggaaaa 294  Q
    ||||||||||| ||||| ||| |||||||||||| || | |||||||||||||||    
T  35348707 tgaatttattctcatcttcatgggaactttattcccacccttttctttgggaaaa 35348653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 339
Target Start/End: Complemental strand, 43346992 - 43346962
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaaca 339  Q
    |||||||||||||||||||||||||||||||    
T  43346992 ggaataaaatttagtaaacttgtaacaaaca 43346962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 555804 - 555771
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  555804 aggaataaattttagtaaacttgtaacaaacata 555771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 6091688 - 6091721
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  6091688 aggaataaattttagtaaacttgtaacaaacata 6091721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 309
Target Start/End: Original strand, 20962410 - 20962547
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttat 271  Q
    |||||||| ||||| ||||||||||  | | |||||| ||| |||  ||| ||||||| |  || | || ||||||||| |||||||||  ||||||||     
T  20962410 tatgtttgcttaacattataatatttctgggaaccataaaaataggaattataataggaaattactcattaatttattctcatctccatgagaactttac 20962509  T
Q  272 tctcatcattttctttgggaaaaatattctatttccag 309  Q
    || || | ||||| ||||||||||| ||||||| ||||    
T  20962510 tcccacccttttccttgggaaaaattttctattcccag 20962547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 35348862 - 35348797
Alignment:
Q  83 ttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttatt 148  Q
    |||||||||||||||||||||| ||| |||||| |||  ||| || |||||||||  |||||||||    
T  35348862 ttttaagtttatcaaatttattcttaagaataacattcattggaacataaagatgagaattttatt 35348797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 36703847 - 36703880
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  36703847 aggaataaattttagtaaacttgtaacaaacata 36703880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 14207168 - 14207088
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||||| |||||||  |||||||||  ||||||||| |||  ||| ||||||||||||  ||||||||| ||||    
T  14207168 ggtgtgtttgtttcaagtttacaaaatttattcctaggaataacattcattggaatataaagatgagaattttatttcaag 14207088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 337
Target Start/End: Original strand, 28429675 - 28429703
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaa 337  Q
    |||||||||||||||||||||||||||||    
T  28429675 ggaataaaatttagtaaacttgtaacaaa 28429703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 40275852 - 40275820
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||| ||||||||||||||||||    
T  40275852 ggaataaaatttagcaaacttgtaacaaacata 40275820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 43347241 - 43347177
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatg 137  Q
    |||| |||||||| ||||||   ||||||||| |||||||||| |||| ||| ||||||||||||    
T  43347241 ggtgtgtttgtttcaagttttcgaaatttattcttaggaataacatttattggaatataaagatg 43347177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 1e-42; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 72 - 312
Target Start/End: Original strand, 40435627 - 40435864
Alignment:
Q  72 aggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnn 171  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||            
T  40435627 aggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaa 40435722  T
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaacttta 270  Q
    |||||||||||||||||||||||||| ||| |||||| ||| |||||||| |||||||| | |||||||||||||||||| |||||| || |||||||||    
T  40435723 tatgtttggttaactttataatattcctaggaaccataaaaatagagattataataggtaaactatttatgaatttattcccatctctatgggaacttta 40435822  T
Q  271 ttctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||| || | ||||| ||||||||  | ||||||| |||||||    
T  40435823 ttcccacccttttccttgggaaattttttctattcccaggaa 40435864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 43722992 - 43723228
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||| ||||||||| ||| |||| ||||||||||||| |||||||||||||   | | ||||        |    
T  43722992 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaa---aga-atttaggaaaaat 43723087  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  43723088 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccatgggaactttat 43723187  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||||| | ||||| ||||||||  | ||||||| |||||||    
T  43723188 tctcacccttttccttgggaaattttttctattcccaggaa 43723228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 25932169 - 25932405
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||  ||||||||||  ||||||||| ||| |||||||||||||||||| ||||||||||||||  ||    ||        |    
T  25932169 ggtgtgtttgtttcaagtttcccaaatttattcctaggaataacattccttgaaatataaagatgggaattttattccaaggaat----ttaggaaaaat 25932264  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  25932265 atgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 25932364  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  25932365 tcccacccttttccttgggaaattttttctattcccaggaa 25932405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 27763246 - 27763010
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||| | ||||||||||||||  ||    ||        |    
T  27763246 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagataggaattttattccaaggaat----ttaggaaaaat 27763151  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  27763150 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 27763051  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| |||||||| || ||||||| |||||||    
T  27763050 tcccacccttttccttgggaaatattttctattcccaggaa 27763010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 39730640 - 39730404
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        |    
T  39730640 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttaggaaaaat 39730545  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||||||||||||||||| ||| |||||||||| ||| |||| |||||||| | |||||||||||||||||| |||||||||  |||||||||    
T  39730544 atgtttggttaactttataatattcctaggaaccatgaaaatagggattataataggtaaactatttatgaatttattcccatctccatgtgaactttat 39730445  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  39730444 tcccacccttttccttgggaaattttttctattcccaggaa 39730404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 13230336 - 13230100
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  13230336 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaat 13230241  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  13230240 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 13230141  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  13230140 tcccacccttttccttgggaaattttttctattcccaggaa 13230100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 31938216 - 31938020
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||| |||||||| ||||||||||||||| |||    ||        |    
T  31938216 ggtgtgtttgtttcaagtttatcaaatttattcataggaataacattccttggaatttaaagatgaaaattttattccaaggtat----ttaggaaaaat 31938121  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttatt 272  Q
    ||||||||||||||||||||||||| ||| |||||| ||| ||  |||| ||||||||| || ||||||||||||||| ||||||||| |||||||||||    
T  31938120 atgtttggttaactttataatattcctaggaaccataaaaataaggattataataggtaactgtttatgaatttattctcatctccatgggaactttatt 31938021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 45595996 - 45596232
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| |||||||||| |||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  45595996 ggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaat 45596091  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||| ||||| ||||||||||    
T  45596092 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatttccatgggaactttat 45596191  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  45596192 tcccacccttttccttgggaaattttttctattcccaggaa 45596232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 73 - 289
Target Start/End: Complemental strand, 18405580 - 18405367
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc-caagatatatatttnnnnnnnn 171  Q
    |||| |||||||| ||||||| |||||||||| |||||||||| ||| |||| |||||||||||||||||||||||| || ||     ||||            
T  18405580 ggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatggaaattttattctcagga-----atttaggaaaaa 18405486  T
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaacttta 270  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||    
T  18405485 tatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccatgggaacttta 18405386  T
Q  271 ttctcatcattttctttgg 289  Q
    |||||| | ||||| ||||    
T  18405385 ttctcacccttttccttgg 18405367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 78 - 312
Target Start/End: Original strand, 35999419 - 35999650
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| |||||||||| ||| |||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        ||||||    
T  35999419 gtttgtttcaagtttaccaaatttattcttaagaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaatatgtt 35999514  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| ||    
T  35999515 tggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttattccca 35999614  T
Q  277 tcattttctttgggaaaaatattctatttccaggaa 312  Q
     | ||||| ||||||||  | ||||||| |||||||    
T  35999615 cccttttccttgggaaattttttctattcccaggaa 35999650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 66 - 314
Target Start/End: Original strand, 23686508 - 23686753
Alignment:
Q  66 aacttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnn 165  Q
    |||||| |||| |||||||| ||||||| |||||||||| |||||||||| ||| |||||||||||||||||| ||||||||||||||      ||||      
T  23686508 aacttagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttgaaatataaagatgggaattttattccaag----gaatttag 23686603  T
Q  166 nnnnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattgga 264  Q
          ||||||||||||  |||||||||||| ||| |||||| ||| ||   ||| |||||||| | |||||||||||||||||| ||||||||| |||    
T  23686604 gaaaaatatgtttggttagttttataatattcctaggaaccataaaaatatgaattataataggtaaactatttatgaatttattcccatctccatggga 23686703  T
Q  265 actttattctcatcattttctttgggaaaaatattctatttccaggaata 314  Q
    ||||||||| || | ||||| ||||||||  | ||||||| |||| ||||    
T  23686704 actttattcccacccttttccttgggaaattttttctattcccagaaata 23686753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 67 - 312
Target Start/End: Original strand, 48879047 - 48879289
Alignment:
Q  67 acttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnn 166  Q
    ||||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||| ||||||||||  || ||          
T  48879047 acttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaatattattccaaggaatgta----gg 48879142  T
Q  167 nnnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaa 265  Q
         |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||    
T  48879143 aaaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaa 48879242  T
Q  266 ctttattctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    |||||||| || | ||||| ||||||||  | ||||||| |||||||    
T  48879243 ctttattcccacccttttccttgggaaattttttctattcccaggaa 48879289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 55968347 - 55968150
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  55968347 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttagaaaaaat 55968252  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||| | |||||||||||||||||| ||||||||| ||||||||||    
T  55968251 atgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 55968152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 39835654 - 39835418
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||| || |||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  39835654 ggtgtgtttgtttcaagtttaccaaatttatttctatgaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaat 39835559  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||||||||||||||||| |||||| ||| ||| ||  |||| |||||||||  ||||||||||||||||||  |||||||| ||||||||||    
T  39835558 atgtttggttaactttataatattcctagaaatcataaaaataaggattataataggtaaactatttatgaatttattctaatctccatgggaactttat 39835459  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  39835458 tcccacccttttccttgggaaattttttctattcccaggaa 39835418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 70 - 312
Target Start/End: Complemental strand, 41744571 - 41744332
Alignment:
Q  70 taaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnn 169  Q
    ||||||| |||||||| ||||||| ||||||||||| ||||||||| |||  ||| ||||||||||||  ||||||||||||||  ||    ||          
T  41744571 taaggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattcattggaatataaagatgagaattttattccaaggaat----ttaggaaa 41744476  T
Q  170 nntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactt 268  Q
      |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  ||| |||||||||||||| ||||||||| |||||||    
T  41744475 aatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactaattatgaatttattctcatctccataggaactt 41744376  T
Q  269 tattctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||||| || | ||||| ||||||||  | ||||||| |||||||    
T  41744375 tattcccacccttttccttgggaaattttttctattcccaggaa 41744332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 79 - 293
Target Start/End: Complemental strand, 50673245 - 50673035
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgttt 178  Q
    ||||||| ||||||||||||||||||  ||||||||| ||| |||||||||||||||||  ||||||||||||||  ||    ||        |||||||    
T  50673245 tttgtttcaagtttatcaaatttattcctaggaataacattccttgaaatataaagatgagaattttattccaaggaat----ttaggaaaaatatgttt 50673150  T
Q  179 ggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctcat 277  Q
    ||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| ||     
T  50673149 ggttagctttataatattcctaggaaccataaaa-tagggattataataggtaaactatttatgaatttattcccatctccatgggaactttattcccac 50673051  T
Q  278 cattttctttgggaaa 293  Q
    | ||||| ||||||||    
T  50673050 ccttttccttgggaaa 50673035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 67 - 293
Target Start/End: Original strand, 48873743 - 48873966
Alignment:
Q  67 acttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnn 166  Q
    ||||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||| ||||||||||  || ||          
T  48873743 acttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaatattattccaaggaatgta----gg 48873838  T
Q  167 nnnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaa 265  Q
         |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||    
T  48873839 aaaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaa 48873938  T
Q  266 ctttattctcatcattttctttgggaaa 293  Q
    |||||||| || | ||||| ||||||||    
T  48873939 ctttattcccacccttttccttgggaaa 48873966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 45748142 - 45747946
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  45748142 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttagaaaaaat 45748047  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttatt 272  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| |||||||| |||| |  | |||||||||||||||||| ||||||||| |||||||||||    
T  45748046 atgtttggttagctttataatattcctaggaaccataaaaatagagattataatggtaaactatttatgaatttattctcatctccatgggaactttatt 45747947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 78 - 312
Target Start/End: Complemental strand, 48519233 - 48519002
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        ||||||    
T  48519233 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgtgaattttattccaaggaat----ttaggaaaaatatgtt 48519138  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||||||||| ||| |||||| ||| |||  ||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| ||    
T  48519137 tggttagctttataatattcctaggaaccataaaaataggtattataataggtaaactatttatgaatttattcccatctccatgggaactttattccca 48519038  T
Q  277 tcattttctttgggaaaaatattctatttccaggaa 312  Q
     | ||||| ||||||||  | ||||||| |||||||    
T  48519037 cccttttccttgggaaattttttctattcccaggaa 48519002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 6280268 - 6280032
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| |||||||| || | ||||||||||||||  || |||          |    
T  6280268 ggtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttggaatataaaaataggaattttattccaaggaatttat----gaaaaat 6280173  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    || |||||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| |||||||||  |||||||||    
T  6280172 atatttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgagaactttat 6280073  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  6280072 tcccacccttttccttgggaaattttttctattcccaggaa 6280032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 73 - 341
Target Start/End: Original strand, 27555155 - 27555420
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| |||||||  |||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  27555155 ggtgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaat 27555250  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatct-atttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||| ||||| ||| |||||| ||| ||| |||| |||||||||  | |||||||||||||||| ||||||||| ||||||||||    
T  27555251 atgtttggttagctttata-tattcctaggaaccataaaaatagggattataataggtaaattatttatgaatttattcccatctccatgggaactttat 27555349  T
Q  272 tctcatcattttctttgggaaa-aatattctatttccaggaataaaatttagtaaacttgtaacaaacata 341  Q
    || || | ||||| ||||||||   | || |||  ||  ||||||||||||||||||||||||||||||||    
T  27555350 tcccacccttttccttgggaaatttttttttatacccgcgaataaaatttagtaaacttgtaacaaacata 27555420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 73 - 293
Target Start/End: Complemental strand, 41859393 - 41859176
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||| ||||  ||    ||        |    
T  41859393 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatttcaaggaat----ttaggaaaaat 41859298  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  41859297 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 41859198  T
Q  272 tctcatcattttctttgggaaa 293  Q
    || || | ||||| ||||||||    
T  41859197 tcccacccttttccttgggaaa 41859176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 78 - 293
Target Start/End: Original strand, 42773681 - 42773893
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||| ||||| ||| |||| | ||||||||||| ||||||||||||||  ||    ||        ||||||    
T  42773681 gtttgtttcaagtttaccaaatttattcctagaaataacattccttggagtataaagatgggaattttattccaaggaat----ttaggaaaaatatgtt 42773776  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| ||    
T  42773777 tggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttattccca 42773876  T
Q  277 tcattttctttgggaaa 293  Q
     | ||||| ||||||||    
T  42773877 cccttttccttgggaaa 42773893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 47670090 - 47670326
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  47670090 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaat 47670185  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    || |||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||| ||| | ||||||||    
T  47670186 atatttggttatctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatcttcatggaaactttat 47670285  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    |  || ||||||| ||||||||  | ||||||| |||||||    
T  47670286 ttccaccattttccttgggaaattttttctattcccaggaa 47670326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 79 - 293
Target Start/End: Complemental strand, 34238295 - 34238084
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgttt 178  Q
    ||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        |||||||    
T  34238295 tttgtttcaagtttatcaaatttattcataggaataacattccttggaatataaagatgagaattttattccaaggaat----ttaagaaaaatatgttt 34238200  T
Q  179 ggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctcat 277  Q
    ||||| ||||||||||||| ||| ||| |  ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| ||     
T  34238199 ggttagctttataatattcctaggaacaaaaaaaatagggattataataggtaaactatttatgaatttattctcatctccatgggaactttattcccac 34238100  T
Q  278 cattttctttgggaaa 293  Q
    | ||||| ||||||||    
T  34238099 ccttttccttgggaaa 34238084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 273
Target Start/End: Original strand, 8321968 - 8322170
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||| ||||||||||||||||||||| |||  ||| ||||||||||||  ||||||||| ||||  ||    ||        
T  8321968 cttagggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattctttggaatataaagatgagaattttattacaaggaat----ttagga 8322063  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaac 266  Q
        |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| |  ||||||||||||||||| ||||||||| |||||    
T  8322064 aaaatatgtttggttagctttataatattcataggaaccataaaaatagggattataataggtaaattatttatgaatttattctcatctccatgggaac 8322163  T
Q  267 tttattc 273  Q
    |||||||    
T  8322164 tttattc 8322170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 78 - 283
Target Start/End: Original strand, 18931486 - 18931688
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    ||||||||||||||||||||||||||| |||||||||| ||| |||| ||||||||||| ||||||||||||||||      ||||        ||||||    
T  18931486 gtttgttttaagtttatcaaatttattcttaggaataacattccttggaatataaagatagaaattttattccaag----gaatttaagaaaaatatgtt 18931581  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaatagg-tatctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||||||||| ||  ||| || ||| ||| |||| |||||||  |  ||||||| ||||||||| ||||||||| |||||||||||| ||    
T  18931582 tggttagctttataatattcctatgaactataaaaatagggattataataggaaaattatttataaatttattcccatctccatgggaactttattccca 18931681  T
Q  277 tcatttt 283  Q
     ||||||    
T  18931682 ccatttt 18931688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 935854 - 936051
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| |||||||||| ||| |||||| |||||||| ||||||||||| | |||||||||||||   | | ||||        |    
T  935854 ggtgtgtttgtttcaagtttaccaaatttattcttaagaataacatttcttggaatataaagataggaattttattccaa---aga-atttaggaaaaat 935949  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| ||| || ||| ||| |||| |||||||||  |||||||||||||||||| ||| ||||| ||||||||||    
T  935950 atgtttggttagctttataatattcctaggaactataaaaatagggattataataggtaaactatttatgaatttattctcatttccatgggaactttat 936049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 78 - 293
Target Start/End: Original strand, 32953256 - 32953468
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||||| ||||||||| ||| |||||||||  ||| ||||||||||||| ||||||||||||||  ||    ||        ||||||    
T  32953256 gtttgtttcaagtttatctaatttatttctagaaataatattcattggaatataaagatgggaattttattccaaggaat----ttaggaaaaatatgtt 32953351  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||||||||   || |||||| ||| ||| |||| ||||||| |  |||||||||||||||||| |||||||||  ||||||||||| ||    
T  32953352 tggttagctttataatatttcaaggaaccataaaaatagggattataataggaaaactatttatgaatttattcccatctccatgagaactttattccca 32953451  T
Q  277 tcattttctttgggaaa 293  Q
     ||||||| ||||||||    
T  32953452 ccattttccttgggaaa 32953468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 172 - 312
Target Start/End: Complemental strand, 34049849 - 34049708
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaacttta 270  Q
    |||||||||||| |||||||||||||  || |||||| ||| ||| |||| ||||||| |  |||||||||||||||||| ||||||||| |||||||||    
T  34049849 tatgtttggttagctttataatattccaaggaaccataaaaatagggattataataggaaaactatttatgaatttattcccatctccatgggaacttta 34049750  T
Q  271 ttctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||| || ||||||  ||||||||  | ||||||| |||||||    
T  34049749 ttcccaccatttttcttgggaaattttttctattcccaggaa 34049708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 78 - 304
Target Start/End: Original strand, 52469430 - 52469654
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttctt-gaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgt 176  Q
    |||||||||||||| |||||||||||| |||||||||| ||| ||| | ||||||||||| |||||||||| |||| |||| ||            ||||    
T  52469430 gtttgttttaagttaatcaaatttattcttaggaataacattcctttggaatataaagattgaaattttataccaaaatattta---gaaaaaaacatgt 52469526  T
Q  177 ttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctca 276  Q
    ||||||| ||||||||||||| ||  |||||| ||  |||||||| ||||||||| |||| |  |||||||||  ||||||||| |||||||||||| ||    
T  52469527 ttggttagctttataatattcctatgaaccataaatatagagattataataggtaactatattggaatttatttccatctccatgggaactttattccca 52469626  T
Q  277 tcattttctttgggaaaaatattctatt 304  Q
     || |||| |||| |||||  |||||||    
T  52469627 ccaatttccttggaaaaaaatttctatt 52469654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 38414032 - 38414152
Alignment:
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttatt 272  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||  ||| ||||||||| |||  ||||||||||||  |||||||||  ||||||||||    
T  38414032 atgtttgggtaactttataatattcttagaaaccataaaaataggaattataataggtaactacatatgaatttattaccatctccatgagaactttatt 38414131  T
Q  273 ctcatcattttctttgggaaa 293  Q
    | || | ||||| ||||||||    
T  38414132 cccacccttttccttgggaaa 38414152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 172 - 322
Target Start/End: Original strand, 36858230 - 36858378
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||| ||||||| |||||||| ||| |||||| ||| ||  |||| ||| ||||| |||| ||||||||||||| |||||||||  ||| |||||    
T  36858230 tatgtttggataactttgtaatattcctaggaaccataaaaataaggattataacaggtaactatatatgaatttattcccatctccatgagaattttat 36858329  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaataaaatttag 322  Q
    || || | |||||||||||||||  ||| |||  |||||||||||||||||    
T  36858330 tcccacccttttctttgggaaaa--attttatacccaggaataaaatttag 36858378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 25916285 - 25916163
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaacttta 270  Q
    |||||||| ||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||| ||| |||||||||    
T  25916285 tatgtttgattagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatcttcatgggaacttta 25916186  T
Q  271 ttctcatcattttctttgggaaa 293  Q
    ||| || | ||||| ||||||||    
T  25916185 ttcccacccttttccttgggaaa 25916163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 172 - 312
Target Start/End: Original strand, 27942560 - 27942701
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatct-atttatgaatttattcacatctccattggaacttta 270  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| ||  |||| |||||||||  | |||||||||||||||| ||| || || |||||||||    
T  27942560 tatgtttggttagctttataatattcctaggaaccataaaaataaggattataataggtaaattatttatgaatttattctcatttcaatgggaacttta 27942659  T
Q  271 ttctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||| || | ||||| ||||||||  | ||||||| |||||||    
T  27942660 ttcccacccttttccttgggaaattttttctattcccaggaa 27942701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 7258692 - 7258772
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||||| |||||||||||||||||| | |||||||| ||| |||| |||||||| |||| ||||||||||||||    
T  7258692 ggtgtgtttgtttcaagtttatcaaatttattctcaggaataacattccttggaatataaatatgggaattttattccaag 7258772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 14796296 - 14796366
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttatt 148  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||  ||||||||||||  |||||||||    
T  14796296 gtttattttaagtttgtcaaatttatttttaggaataatattttttagaatataaagatgtgaattttatt 14796366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 18405131 - 18405196
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatgg 138  Q
    |||| |||||||||||||||  |||||||||| |||||||||| ||| ||||||||||||||||||    
T  18405131 ggtgtgtttgttttaagtttgccaaatttattcttaggaataacattccttgaaatataaagatgg 18405196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 272
Target Start/End: Original strand, 39498652 - 39498749
Alignment:
Q  176 tttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaactttatt 272  Q
    |||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | |||||||||||||||||| |||||| ||  ||||||||||    
T  39498652 tttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctctatgagaactttatt 39498749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 272
Target Start/End: Original strand, 39501991 - 39502088
Alignment:
Q  176 tttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaactttatt 272  Q
    |||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | |||||||||||||||||| |||||| ||  ||||||||||    
T  39501991 tttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctctatgagaactttatt 39502088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 10401122 - 10401040
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatata 160  Q
    |||||||||||||||| ||||||||||| | | ||||| |||  ||||| |||||| |||  |||||||||||||||||||||    
T  10401122 gtttgttttaagtttaccaaatttatttctggaaataacattctttgaagtataaaaatgagaattttattccaagatatata 10401040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 342
Target Start/End: Complemental strand, 12276012 - 12275975
Alignment:
Q  305 tccaggaataaaatttagtaaacttgtaacaaacataa 342  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12276012 tccaggaataaaatttagtaaacttgtaacaaacataa 12275975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 341
Target Start/End: Original strand, 52414168 - 52414229
Alignment:
Q  280 ttttctttgggaaaaatattctatttccaggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||| |||||| |||||| ||||| ||||||||||| |||||||| ||||||||||    
T  52414168 ttttctttggaaaaaatgttctatatccagaaataaaatttaataaacttgcaacaaacata 52414229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 289
Target Start/End: Original strand, 18094073 - 18094189
Alignment:
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttatt 272  Q
    |||||| |||||| |||||||||| |||| || ||| ||| ||   ||| |||||||||  ||   |||||||||||| ||||| ||| |||||||||||    
T  18094073 atgtttagttaacattataatatttttaggaatcataaaaatatgaattataataggtagttacacatgaatttattctcatcttcatgggaactttatt 18094172  T
Q  273 ctcatcattttctttgg 289  Q
    |||| ||||||||||||    
T  18094173 ctcaccattttctttgg 18094189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 293
Target Start/End: Original strand, 30415743 - 30415847
Alignment:
Q  189 ataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctcatcattttctttg 288  Q
    ||||||||||||| |||||| ||| ||| |||| |||||||||  |||||||||| |||||  |||||  || | || ||||||| || |||||||||||    
T  30415743 ataatattcttaggaaccataaaaatagggattataataggtaattatttatgaaattattttcatctttatggaaattttattcccaccattttctttg 30415842  T
Q  289 ggaaa 293  Q
    |||||    
T  30415843 ggaaa 30415847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 36860103 - 36860027
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| || ||||| |||||||||||||||    
T  36860103 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaacataaaaatggaaattttattc 36860027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 38394883 - 38394919
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacataagc 344  Q
    |||||||||||||||||||||||||||||||||||||    
T  38394883 aggaataaaatttagtaaacttgtaacaaacataagc 38394919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 38413909 - 38413984
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||||| ||||||| |||||||| |||||| ||||| ||| |||| ||||||||||||  ||||| ||||||||    
T  38413909 gtttgtttcaagtttaccaaatttaattttagaaataacattccttggaatataaagatgagaatttaattccaag 38413984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 37014724 - 37014646
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatat 157  Q
    ||||||| |||||||  |||||||||  || ||||||||||| ||| ||||||||||||  |||||||||| |||||||    
T  37014724 tttgtttcaagtttacaaaatttattcctaagaataatattttttggaatataaagatgcgaattttattcgaagatat 37014646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 272
Target Start/End: Complemental strand, 47426482 - 47426393
Alignment:
Q  176 tttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttatt 272  Q
    |||||||||||||||||||||| ||| ||||       ||| |||| ||||||||| |||||||||||||||||  ||||| ||| |||||||||||    
T  47426482 tttggttaactttataatattcctaggaacc-------tagggattataataggtaactatttatgaatttattttcatcttcatgggaactttatt 47426393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 936104 - 936136
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  936104 ggaataaaatttagtaaacttgtaacaaacata 936136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 6280018 - 6279986
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  6280018 ggaataaaatttagtaaacttgtaacaaacata 6279986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 13230086 - 13230054
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  13230086 ggaataaaatttagtaaacttgtaacaaacata 13230054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 25916130 - 25916098
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  25916130 ggaataaaatttagtaaacttgtaacaaacata 25916098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 342
Target Start/End: Original strand, 26165343 - 26165375
Alignment:
Q  310 gaataaaatttagtaaacttgtaacaaacataa 342  Q
    |||||||||||||||||||||||||||||||||    
T  26165343 gaataaaatttagtaaacttgtaacaaacataa 26165375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 27762996 - 27762964
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  27762996 ggaataaaatttagtaaacttgtaacaaacata 27762964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 34049694 - 34049662
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  34049694 ggaataaaatttagtaaacttgtaacaaacata 34049662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 344
Target Start/End: Complemental strand, 36858470 - 36858438
Alignment:
Q  312 ataaaatttagtaaacttgtaacaaacataagc 344  Q
    |||||||||||||||||||||||||||||||||    
T  36858470 ataaaatttagtaaacttgtaacaaacataagc 36858438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 39730390 - 39730358
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  39730390 ggaataaaatttagtaaacttgtaacaaacata 39730358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 42773926 - 42773958
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  42773926 ggaataaaatttagtaaacttgtaacaaacata 42773958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 45747893 - 45747861
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  45747893 ggaataaaatttagtaaacttgtaacaaacata 45747861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 48518988 - 48518956
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  48518988 ggaataaaatttagtaaacttgtaacaaacata 48518956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 304
Target Start/End: Original strand, 18405586 - 18405709
Alignment:
Q  181 ttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctcatcat 280  Q
    ||||| ||||||||||  ||| |||||| ||| |||||||| |||||||||  ||   ||| |||||||| |||||  ||  ||||||||||| || | |    
T  18405586 ttaacattataatatttctaggaaccataaaaatagagattataataggtaattacacatggatttattcccatcttaatgagaactttattcccaccct 18405685  T
Q  281 tttctttgggaaaaatattctatt 304  Q
    ||||||| |||||||| |||||||    
T  18405686 tttctttaggaaaaattttctatt 18405709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 30790276 - 30790354
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaa 152  Q
    |||| |||||||| ||||||| ||||||||||| ||||| ||| | |||||| ||||||||||||  || ||||||||||    
T  30790276 ggtgtgtttgtttcaagtttagcaaatttatttctaggagtaaca-ttcttggaatataaagatgagaaatttattccaa 30790354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 341
Target Start/End: Complemental strand, 50673001 - 50672970
Alignment:
Q  310 gaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||    
T  50673001 gaataaaatttagtaaacttgtaacaaacata 50672970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 346
Target Start/End: Complemental strand, 9297172 - 9297138
Alignment:
Q  312 ataaaatttagtaaacttgtaacaaacataagctt 346  Q
    ||||||||||||||||||||||||||||| |||||    
T  9297172 ataaaatttagtaaacttgtaacaaacatgagctt 9297138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 12276250 - 12276173
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatat 157  Q
    ||||||| |||||||  |||||||||| ||||||||| |||| ||||| ||||||||||  ||||||||| ||| ||||    
T  12276250 tttgtttcaagtttactaaatttatttataggaataacattttttgaa-tataaagatgtgaattttatttcaaaatat 12276173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 339
Target Start/End: Original strand, 30415880 - 30415910
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaaca 339  Q
    |||||||||||||||||||||||||||||||    
T  30415880 ggaataaaatttagtaaacttgtaacaaaca 30415910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 342
Target Start/End: Original strand, 39498802 - 39498836
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacataa 342  Q
    ||||||||| |||||||||||||||||||||||||    
T  39498802 aggaataaattttagtaaacttgtaacaaacataa 39498836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 342
Target Start/End: Original strand, 39502141 - 39502175
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacataa 342  Q
    ||||||||| |||||||||||||||||||||||||    
T  39502141 aggaataaattttagtaaacttgtaacaaacataa 39502175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 341
Target Start/End: Complemental strand, 47426336 - 47426306
Alignment:
Q  311 aataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||    
T  47426336 aataaaatttagtaaacttgtaacaaacata 47426306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 302
Target Start/End: Original strand, 4689649 - 4689690
Alignment:
Q  261 tggaactttattctcatcattttctttgggaaaaatattcta 302  Q
    |||||||||||||||| |||||||||||| ||||| ||||||    
T  4689649 tggaactttattctcaccattttctttggaaaaaaaattcta 4689690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 8322222 - 8322255
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  8322222 aggaataaattttagtaaacttgtaacaaacata 8322255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 18405332 - 18405299
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  18405332 aggaataaattttagtaaacttgtaacaaacata 18405299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 25932418 - 25932451
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  25932418 aggaataaattttagtaaacttgtaacaaacata 25932451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 34238052 - 34238019
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  34238052 aggaataaattttagtaaacttgtaacaaacata 34238019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 35999663 - 35999696
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  35999663 aggaataaattttagtaaacttgtaacaaacata 35999696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 273
Target Start/End: Complemental strand, 36858628 - 36858527
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttat 271  Q
    |||||||| ||||| |||||||||||   |||||||| ||| ||| |||| ||||| |||  ||  |||||| |||||| ||||| ||| ||||||||||    
T  36858628 tatgtttgtttaacattataatattcccggaaaccataaaaatagggattataatatgtaattacatatgaaattattctcatcttcatgggaactttat 36858529  T
Q  272 tc 273  Q
    ||    
T  36858528 tc 36858527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 40435877 - 40435910
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  40435877 aggaataaattttagtaaacttgtaacaaacata 40435910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 43723241 - 43723274
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  43723241 aggaataaattttagtaaacttgtaacaaacata 43723274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 44309737 - 44309770
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||| |||||||||||||||    
T  44309737 aggaataaaatttagtaaccttgtaacaaacata 44309770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 45596245 - 45596278
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  45596245 aggaataaattttagtaaacttgtaacaaacata 45596278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 47670339 - 47670372
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  47670339 aggaataaattttagtaaacttgtaacaaacata 47670372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 48879302 - 48879335
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  48879302 aggaataaattttagtaaacttgtaacaaacata 48879335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 339
Target Start/End: Original strand, 7258943 - 7258971
Alignment:
Q  311 aataaaatttagtaaacttgtaacaaaca 339  Q
    |||||||||||||||||||||||||||||    
T  7258943 aataaaatttagtaaacttgtaacaaaca 7258971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 38394635 - 38394715
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||||| ||||||| ||||||||||| || || |||||||||||  || ||||| |||  ||||||||| ||||    
T  38394635 ggtgtgtttgtttcaagtttaccaaatttatttctaagactaatatttcttagaacataaatatgagaattttatttcaag 38394715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 44309497 - 44309553
Alignment:
Q  81 tgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatg 137  Q
    ||||| |||||||  ||||||||||||| ||||||||||||||  || |||||||||    
T  44309497 tgtttgaagtttactaaatttatttttaagaataatatttcttagaacataaagatg 44309553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 7e-41; HSPs: 97)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 71 - 312
Target Start/End: Complemental strand, 1597691 - 1597453
Alignment:
Q  71 aaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnn 170  Q
    |||||| |||||||| ||||||| ||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||      ||||           
T  1597691 aaggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttgaaatataaagatgggaattttattccaag----gaatttaggaaaa 1597596  T
Q  171 ntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaacttt 269  Q
     |||||||||||||||||||||||||||||| |||||| ||| ||  |||| |||||||| | |||||||||||||||||| ||||| ||| ||||||||    
T  1597595 atatgtttggttaactttataatattcttaggaaccataaaaatatggattataataggtaaactatttatgaatttattcccatcttcatgggaacttt 1597496  T
Q  270 attctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    |||| || | ||||  |||| |||| | ||||||| |||||||    
T  1597495 attcccaccctttttcttggaaaaatttttctattcccaggaa 1597453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 72 - 293
Target Start/End: Complemental strand, 32202661 - 32202443
Alignment:
Q  72 aggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnn 171  Q
    ||||| |||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||||  ||||||||||||||| ||    ||            
T  32202661 aggtgtgtttgtttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgagaattttattccaagaaat----ttaggaaaaa 32202566  T
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaacttta 270  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||    
T  32202565 tatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaacttta 32202466  T
Q  271 ttctcatcattttctttgggaaa 293  Q
    ||| || | ||||| ||||||||    
T  32202465 ttcccacccttttccttgggaaa 32202443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 73 - 294
Target Start/End: Complemental strand, 37436966 - 37436749
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| |||||||||| ||| |||||| ||| |||| |||||||| |||||||||||||| |||| | |    ||        |    
T  37436966 ggtgtgtttgtttcaagtttaccaaatttattcttaagaataacattccttggaatataaatatggaaattttatttcaaggtgt----ttaggaaaaat 37436871  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttatt 272  Q
    ||||||||||||||||||||||||||||| |||||| ||| ||  |||| |||||| || |||||||||||||||||| ||||||||| |||||||||||    
T  37436870 atgtttggttaactttataatattcttaggaaccataaaaataaggattataatagataactatttatgaatttattctcatctccatgggaactttatt 37436771  T
Q  273 ctcatcattttctttgggaaaa 294  Q
    |||| | |||||||||||||||    
T  37436770 ctcacccttttctttgggaaaa 37436749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 78 - 293
Target Start/End: Complemental strand, 48916364 - 48916152
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| |||||||||||||||||| |||||||||| ||| |||  ||||||||||||  |||||||||||||| ||| ||           ||||||    
T  48916364 gtttgtttcaagtttatcaaatttattcttaggaataacattccttagaatataaagatgagaattttattccaaggtattta---gaaaaaaatatgtt 48916268  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctcat 277  Q
    |||||||||||||||||||| |||||||||| ||| ||| |||| ||||||| | |||  ||||||||||||| ||||||||| |||||||||||| |||    
T  48916267 tggttaactttataatattcctagaaaccataaaaatagggattataataggcaactacatatgaatttattcccatctccatgggaactttattcccat 48916168  T
Q  278 cattttctttgggaaa 293  Q
    | || |||||||||||    
T  48916167 ccttatctttgggaaa 48916152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 76 - 312
Target Start/End: Original strand, 13653579 - 13653812
Alignment:
Q  76 gcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatg-gaaattttattccaagatatatatttnnnnnnnntat 174  Q
    |||||||||| ||||||| ||||||||||  ||||||||| ||| |||| |||||||||||| ||| ||||||| |||| |||    ||        |||    
T  13653579 gcgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaatttttatttcaaggtat----ttggaaaaaatat 13653674  T
Q  175 gtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattct 274  Q
    ||||||||||||||||||||||| ||| |||||| ||| ||| |||| ||||||||| |||  ||||||||||||| ||||||||| ||||||||||||     
T  13653675 gtttggttaactttataatattcctaggaaccataaaattagggattataataggtaactacatatgaatttattctcatctccatgggaactttattcc 13653774  T
Q  275 catcattttctttgggaaaaatattctatttccaggaa 312  Q
    || ||||||||||||||||  | ||||||| |||||||    
T  13653775 caccattttctttgggaaattttttctattcccaggaa 13653812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 14788448 - 14788684
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||||||||||| |||||||||| |||||||||| ||| |||| ||||||||||||| ||||||||| ||||  ||    ||        |    
T  14788448 ggtgtgtttgttttaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttatttcaaggaat----ttaggcaaaat 14788543  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  14788544 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 14788643  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  14788644 tcccacccttttccttgggaaattttttctattcccaggaa 14788684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 25789488 - 25789724
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||| ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        |    
T  25789488 ggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttaggaaaaat 25789583  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  25789584 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 25789683  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  25789684 tcccacccttttccttgggaaattttttctattcccaggaa 25789724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 78 - 312
Target Start/End: Complemental strand, 9832212 - 9831981
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||||||||||||||  ||||||||| ||| || | ||||||||||||| ||||||||||||||  ||    ||        ||||||    
T  9832212 gtttgtttcaagtttatcaaatttattcctaggaataacattcctcggaatataaagatgggaattttattccaaggaat----ttaagaaaaatatgtt 9832117  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| ||    
T  9832116 tggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttattccca 9832017  T
Q  277 tcattttctttgggaaaaatattctatttccaggaa 312  Q
     | ||||| ||||||||| | ||||||| |||||||    
T  9832016 cccttttccttgggaaaatttttctattcccaggaa 9831981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 80 - 273
Target Start/End: Complemental strand, 4683713 - 4683523
Alignment:
Q  80 ttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtttg 179  Q
    |||||| ||||||||||||||||||| || |||||| |||| ||| ||||||||||||| ||||||||||||||  ||    ||        ||||||||    
T  4683713 ttgtttcaagtttatcaaatttatttctaagaataacattttttggaatataaagatgggaattttattccaaggaat----ttaggaaaaatatgtttg 4683618  T
Q  180 gttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattc 273  Q
    |||| ||||||||||||||||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||||||||||||| ||||||||||||    
T  4683617 gttagctttataatattcttaggaaccataaaaatagggattataataggtaaactatttatgaatttattcacatctccatgggaactttattc 4683523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 20260433 - 20260197
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||| ||    ||        |    
T  20260433 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagaaat----ttaggaaaaat 20260338  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||| ||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  20260337 atgtttgcttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 20260238  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  20260237 tcccacccttttccttgggaaattttttctattcccaggaa 20260197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 65 - 312
Target Start/End: Complemental strand, 5518858 - 5518615
Alignment:
Q  65 gaacttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttn 164  Q
    ||||||| |||  |||||||| ||||||| ||||||||||  | ||||||| ||| |||| ||||||||||||| |||||||||||||| |||    ||     
T  5518858 gaacttagggtctgtttgtttgaagtttaccaaatttattcattggaataacattccttggaatataaagatgggaattttattccaaggtat----tta 5518763  T
Q  165 nnnnnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattgga 264  Q
           |||||| |||||||||||||| |||| ||| |||||| ||| ||| |||| ||||||||| |||| ||| ||||||||| ||||||||| |||    
T  5518762 ggaaaaatatgttcggttaactttataacattcctaggaaccataaaaatagggattataataggtaactatatataaatttattctcatctccatggga 5518663  T
Q  265 actttattctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||||||||| || | ||||| ||||||||| | ||||||| |||||||    
T  5518662 actttattcccacctttttccttgggaaaatttttctattcccaggaa 5518615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 6911210 - 6911446
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  || |||          |    
T  6911210 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttat----gaaaaat 6911305  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| |||| |||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| |||||| || ||||||||||    
T  6911306 atgtttggttagctttttaatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctctatgggaactttat 6911405  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || ||||||| ||||||||  | ||||||| |||||||    
T  6911406 tcccaccattttccttgggaaattttttctattcccaggaa 6911446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 8331739 - 8331936
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||| |||||||||||||   | | ||||        |    
T  8331739 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaa---aga-atttaggaaaaat 8331834  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  8331835 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccatgggaactttat 8331934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 9115562 - 9115798
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        |    
T  9115562 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttaggaaaaat 9115657  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  9115658 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 9115757  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  9115758 tcccacccttttccttgggaaattttttctattcccaggaa 9115798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 52630498 - 52630734
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||| ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        |    
T  52630498 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttaggaaaaat 52630593  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| |||  ||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  52630594 atgtttggttagctttataatattcctaggaaccataaaaataggaattataataggtaaactatttatgaatttattctcatctccatgggaactttat 52630693  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||||||| ||||  | ||||||| |||||||    
T  52630694 tcccacccttttctttgagaaattttttctattcccaggaa 52630734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 87 - 273
Target Start/End: Original strand, 35187195 - 35187378
Alignment:
Q  87 aagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtttggttaact 186  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| || | |   ||||        ||||||||||||  |    
T  35187195 aagtttaccaaatttattcttaggaataatatttcttgaaatataaagatggaaattttattctaa-aga---atttaggaaatatatgtttggttagtt 35187290  T
Q  187 ttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaactttattc 273  Q
    ||||||||||| |||||||||| ||| ||| |||| |||||||| | ||||||||||| ||||||  |||||||| ||||||||||||    
T  35187291 ttataatattcctagaaaccataaaaatagggattataataggtaaactatttatgaacttattcttatctccatgggaactttattc 35187378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 68 - 312
Target Start/End: Original strand, 46666428 - 46666669
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  |||||||||| |||  ||    ||        
T  46666428 cttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattctaaggaat----ttagga 46666523  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaac 266  Q
        |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||    
T  46666524 aaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaac 46666623  T
Q  267 tttattctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||||||| || | ||||| ||||||||  | ||||||| |||||||    
T  46666624 tttattcccacccttttccttgggaaattttttctattcccaggaa 46666669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 12190524 - 12190288
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  || |||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  12190524 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaat 12190429  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| |||||||||||||  || |||||| ||| ||| |||| ||||||| |  |||||||||||||||||| ||||| ||| ||||||||||    
T  12190428 atgtttggttagctttataatattccaaggaaccataaaaatagggattataataggaaaactatttatgaatttattcccatcttcatgggaactttat 12190329  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || ||||||| ||||||||  | ||||||| |||||||    
T  12190328 tcccaccattttccttgggaaattttttctattcccaggaa 12190288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 78 - 312
Target Start/End: Complemental strand, 51445421 - 51445190
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||| ||| |||| |||||| |||||  ||||||||||||||  ||    ||        ||||||    
T  51445421 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatatatagatgagaattttattccaaggaat----ttaggaaaaatatgtt 51445326  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| ||    
T  51445325 tggttacctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccatgggaactttattccca 51445226  T
Q  277 tcattttctttgggaaaaatattctatttccaggaa 312  Q
     | ||||| ||||||||  | ||||||| |||||||    
T  51445225 cccttttccttgggaaattttttctattcccaggaa 51445190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 172 - 312
Target Start/End: Original strand, 2632673 - 2632813
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaacttta 270  Q
    |||||||||||||||||||||||||  ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||||||||||||| |||||||||    
T  2632673 tatgtttggttaactttataatatttctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcacatctccatgggaacttta 2632772  T
Q  271 ttctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||| || ||||||| ||||||||  | ||||||| |||||||    
T  2632773 ttc-caccattttccttgggaaattttttctattcccaggaa 2632813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 5806623 - 5806426
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  5806623 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaat 5806528  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | |||||||||||||||||  ||||||||| ||||||||||    
T  5806527 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttatttccatctccatgggaactttat 5806428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 79 - 286
Target Start/End: Original strand, 48462263 - 48462465
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgttt 178  Q
    |||||||||||||||||||||||||||||| |||||| |||  ||| | ||||||||||  |||| ||||||||     ||||||        |||||||    
T  48462263 tttgttttaagtttatcaaatttatttttatgaataacattctttggagtataaagatgagaattatattccaa-----atatttagaaaaaatatgttt 48462357  T
Q  179 ggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctcatc 278  Q
    ||||||||||||||||||  ||| |||||| ||| ||  |||| ||||||||| |||||||||||||||||| ||  ||||| |||||||||| | ||||    
T  48462358 ggttaactttataatatttgtaggaaccataaaaataaggattataataggtaactatttatgaatttattcccaattccatgggaactttatacccatc 48462457  T
Q  279 attttctt 286  Q
     |||||||    
T  48462458 cttttctt 48462465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 172 - 312
Target Start/End: Complemental strand, 3572817 - 3572676
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaacttta 270  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||    
T  3572817 tatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaacttta 3572718  T
Q  271 ttctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||| || | ||||| ||||||||  | ||||||| |||||||    
T  3572717 ttcccacccttttccttgggaaattttttctattcccaggaa 3572676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 32824646 - 32824883
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| || ||||  |||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  32824646 ggtgtgtttgtttcaaatttacgaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaagaaaaat 32824741  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | |||||||||||||||||| ||||| ||| ||||||||||    
T  32824742 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatcttcatgggaactttat 32824841  T
Q  272 tctcatcatttt-ctttgggaaaaatattctatttccaggaa 312  Q
    || || | |||| ||||||||||  | ||||||| |||||||    
T  32824842 tcccacccttttcctttgggaaattttttctattcccaggaa 32824883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 39930182 - 39930379
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| |||  ||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  39930182 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattctttggaatataaagatgggaattttattccaaggaat----ttaagaaaaat 39930277  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | |||||||||||||||||| ||||||||| | ||||||||    
T  39930278 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccatggaaactttat 39930377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 87 - 312
Target Start/End: Complemental strand, 52699798 - 52699577
Alignment:
Q  87 aagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtttggttaact 186  Q
    ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  |||||||||||||| |||    ||        || ||||| |||||     
T  52699798 aagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggtat----ttagaaaaaataagtttgcttaaca 52699703  T
Q  187 ttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctcatcattttctt 286  Q
    ||||||||||| | | |||||||||| |||  ||| ||||||| |  || | |||||||||||| ||||||||| |||||||||||| || | |||||||    
T  52699702 ttataatattcctgggaaccatgaaaataggaattataataggaaattactcatgaatttattcccatctccatgggaactttattcccacccttttctt 52699603  T
Q  287 tgggaaaaatattctatttccaggaa 312  Q
    |||||||||| ||||||| |||||||    
T  52699602 tgggaaaaatgttctattcccaggaa 52699577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 67 - 273
Target Start/End: Original strand, 36361502 - 36361705
Alignment:
Q  67 acttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnn 166  Q
    ||||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| |||||||| |||| ||||||||||||||  ||    ||       
T  36361502 acttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaaaatgggaattttattccaaggaat----ttagg 36361597  T
Q  167 nnnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaa 265  Q
         |||||||||||| ||||||||||||| ||  |||||| ||| ||| |||| |||||||||  ||||||||||||||| || ||||||||| ||||    
T  36361598 aaaaatatgtttggttagctttataatattcctatgaaccataaaaatagggattataataggtaaactatttatgaatttactctcatctccatgggaa 36361697  T
Q  266 ctttattc 273  Q
    ||||||||    
T  36361698 ctttattc 36361705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 73 - 304
Target Start/End: Original strand, 47677369 - 47677596
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||| ||| |||||||| ||||||||| |||||||||| |||||||| ||||||||||||  ||||||||||||||    ||||||        |    
T  47677369 ggtgtgtttatttaaagtttatgaaatttattcttaggaataaaatttcttggaatataaagatgagaattttattccaag----atatttaaaaaaaat 47677464  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttatt 272  Q
    |||||||||||||||| ||||||||| || |||| | ||| ||| |||| ||||| |||  ||   || | ||||||| ||||| ||| |||||||||||    
T  47677465 atgtttggttaactttgtaatattctaaggaaccttaaaaatagggattataatatgtaattacacataattttattcccatcttcatgggaactttatt 47677564  T
Q  273 ctcatcattttctttgggaaaaatattctatt 304  Q
    | |||| ||| ||||||||||| | |||||||    
T  47677565 cccatcctttcctttgggaaaacttttctatt 47677596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 73 - 293
Target Start/End: Original strand, 29091397 - 29091608
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| |||||||||| |||||||||| ||| ||| |||||||||||||| |||||||||||||| ||| |||          |    
T  29091397 ggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttaaaatataaagatgggaattttattccaaggtatttat----aaaaaat 29091492  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttatt 272  Q
    ||||||||||||||||||||||||  ||| |||||| ||| ||| | || ||||||||| |||| | | |||||||     ||||||| |||||||||||    
T  29091493 atgtttggttaactttataatattactaggaaccataaaaatagggtttataataggtaactatgtgtaaatttat-----tctccatgggaactttatt 29091587  T
Q  273 ctcatcattttctttgggaaa 293  Q
    | || | |||| |||||||||    
T  29091588 cccacctttttttttgggaaa 29091608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 172 - 341
Target Start/End: Complemental strand, 49823148 - 49822982
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatct-atttatgaatttattcacatctccattggaacttta 270  Q
    ||||||||||||  |||||||||||| ||| |||||| ||| ||| |||| |||||||||  | |||||||||||||||  ||||||||| |||||||||    
T  49823148 tatgtttggttaggtttataatattcctaggaaccataaaaatagggattataataggtaaattatttatgaatttattatcatctccatgggaacttta 49823049  T
Q  271 ttctcatcattttctttgggaaaaatattctatttccaggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||| || | ||||| ||||||||  | |||||||  |||    ||||||||||||||||||||||||||||    
T  49823048 ttcccacccttttccttgggaaattttttctattctcag----aaaatttagtaaacttgtaacaaacata 49822982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 172 - 273
Target Start/End: Original strand, 39329428 - 39329530
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaacttta 270  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||    
T  39329428 tatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaacttta 39329527  T
Q  271 ttc 273  Q
    |||    
T  39329528 ttc 39329530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 73 - 273
Target Start/End: Complemental strand, 38965026 - 38964829
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||||||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  38965026 ggtgtgtttgttttaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaatat 38964931  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaactttat 271  Q
    || ||||| || ||||||||||||| ||  |||||| ||| ||| |||| |||||||| |  |||||||||||||||||  |||||||| ||||||||||    
T  38964930 atctttggatagctttataatattcctaataaccataaaaatagggattataataggtaaattatttatgaatttattccaatctccatgggaactttat 38964831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 67 - 250
Target Start/End: Original strand, 47031578 - 47031758
Alignment:
Q  67 acttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnn 166  Q
    ||||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||      ||||       
T  47031578 acttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaag----gaatttagg 47031673  T
Q  167 nnnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
         |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  47031674 aaaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 47031758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 78 - 312
Target Start/End: Original strand, 2430227 - 2430457
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| |||||||  |||||||||  |||||||||  || |||| ||||||||||||| ||||||||||||||  ||    ||        ||||||    
T  2430227 gtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttattccaaggaat----ttaggaaaattatgtt 2430322  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatct-atttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||| ||||| ||| |||||| ||| ||| |||| ||||| |||  | |||||||||||||||| ||||||||| |||||||||||| ||    
T  2430323 tggttagctttata-tattcctaggaaccataaaaatagggattataataagtaaattatttatgaatttattcccatctccatgggaactttattccca 2430421  T
Q  277 tcattttctttgggaaaaatattctatttccaggaa 312  Q
     | ||||| ||||||||  | ||||||| |||||||    
T  2430422 cccttttccttgggaaattttttctattcccaggaa 2430457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 172 - 273
Target Start/End: Original strand, 6978590 - 6978692
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaacttta 270  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | |||||||||||||||||| ||||||||| | |||||||    
T  6978590 tatgtttggttagctttataatattcctaggaaccataaaattagggattataataggtaaactatttatgaatttattctcatctccatggaaacttta 6978689  T
Q  271 ttc 273  Q
    |||    
T  6978690 ttc 6978692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 73 - 145
Target Start/End: Complemental strand, 9011509 - 9011437
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaatttt 145  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| || | || ||||||||| |||||||    
T  9011509 ggtgtgtttgttttaagtttatcaaatttatttttaggaataatattcctcggaacataaagatgaaaatttt 9011437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 172 - 292
Target Start/End: Original strand, 30240831 - 30240951
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttat 271  Q
    |||||||||||||||||||||||||| ||  |||||| ||||||| |||| |||||||||  ||  ||| ||||||||| ||||| |||  |||||||||    
T  30240831 tatgtttggttaactttataatattcctaagaaccataaaagtagggattataataggtaattacatataaatttattctcatcttcatgagaactttat 30240930  T
Q  272 tctcatcattttctttgggaa 292  Q
    |||||   |||||||||||||    
T  30240931 tctcactcttttctttgggaa 30240951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 1007591 - 1007669
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    |||||||| ||||||||||||||||||||| |||||| ||| ||  |||| ||||||||| ||||||||||||||||||    
T  1007591 tatgtttgattaactttataatattcttaggaaccataaaaatatggattataataggtaactatttatgaatttattc 1007669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 52186338 - 52186265
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaa 152  Q
    ||||||||||||||| |||||||||||| |||||||| ||| |||| ||||||||||||  |||||||||||||    
T  52186338 tttgttttaagtttaccaaatttattttaaggaataacattccttggaatataaagatgagaattttattccaa 52186265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 157
Target Start/End: Complemental strand, 19923810 - 19923726
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatat 157  Q
    |||| |||||||||||||| ||||||||||||||||| ||||| |||||||  || |||||||||  |||||||||| |||||||    
T  19923810 ggtgtgtttgttttaagttcatcaaatttatttttagaaataacatttcttagaacataaagatgagaattttattctaagatat 19923726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 13932214 - 13932139
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||||| |||||||||||||||||||  |||||||| |||  |||||||||||||||||||| |||||| ||||    
T  13932214 gtttgtttcaagtttatcaaatttatttcaaggaataacattcattgaaatataaagatggaaactttatttcaag 13932139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 25473980 - 25474059
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaa 152  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||  |||||||||||||    
T  25473980 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaa 25474059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 49627304 - 49627374
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttatt 148  Q
    |||||||| || |||| |||||||||||||| |||||| |||||||| ||||||||||||| |||||||||    
T  49627304 gtttgtttcaaatttaccaaatttatttttaagaataacatttcttggaatataaagatgggaattttatt 49627374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 50191016 - 50190895
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaacttta 270  Q
    |||||||| ||| ||||||||||||| ||| || ||| ||| ||| |||| |||||||| | |||||||||||||||||| ||||| ||| |||||||||    
T  50191016 tatgtttgattagctttataatattcctaggaatcataaaaatagggattataataggtaaactatttatgaatttattc-catcttcatgggaacttta 50190918  T
Q  271 ttctcatcattttctttgggaaa 293  Q
    ||| || | ||||| ||||||||    
T  50190917 ttcccacctttttccttgggaaa 50190895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 24116681 - 24116594
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatata 160  Q
    |||| |||||||||||||||| |||||||||| ||| |||||| ||| |||  ||||||||||||  ||||||||| |||| ||||||    
T  24116681 ggtgtgtttgttttaagtttaacaaatttattcttaagaataacattccttagaatataaagatgagaattttatttcaaggtatata 24116594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 149
Target Start/End: Complemental strand, 31807089 - 31807018
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||| ||| ||||| ||||||||||||| || ||||||||||||||| || ||||||||| |||||||||||    
T  31807089 gtttatttcaagttgatcaaatttatttctaagaataatatttcttggaacataaagatgaaaattttattc 31807018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 47037339 - 47037418
Alignment:
Q  233 ctatttatgaatttattcacatctccattggaactttattctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    |||||||||||||||||| ||||||||| |||||||||||| || | ||||| ||||||||  | ||||||| |||||||    
T  47037339 ctatttatgaatttattcccatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaa 47037418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 1228221 - 1228147
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaa 152  Q
    |||||||||||||||| ||||||||||| || ||||||  || |||| ||||||||||||  |||||||||||||    
T  1228221 gtttgttttaagtttaccaaatttatttctatgaataaccttccttggaatataaagatgagaattttattccaa 1228147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 45813727 - 45813666
Alignment:
Q  87 aagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttatt 148  Q
    |||||||||||||||||| |||||||||| |||  ||||||||||||||||  |||||||||    
T  45813727 aagtttatcaaatttattcttaggaataacattcattgaaatataaagatgtgaattttatt 45813666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 3939226 - 3939286
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaa 133  Q
    |||| |||||||||||||||||||||| ||||||||||||||| |||  ||| ||||||||    
T  3939226 ggtgtgtttgttttaagtttatcaaatatatttttaggaataacattctttggaatataaa 3939286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 157
Target Start/End: Original strand, 46960353 - 46960437
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatat 157  Q
    |||| |||||||| || |||||||||||||||  ||||||||| |||  ||| ||||||||||||  || |||||||||||||||    
T  46960353 ggtgtgtttgtttcaaatttatcaaatttattcctaggaataacattctttggaatataaagatgagaaatttattccaagatat 46960437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 306 - 341
Target Start/End: Original strand, 6911465 - 6911500
Alignment:
Q  306 ccaggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||||||    
T  6911465 ccaggaataaaatttagtaaacttgtaacaaacata 6911500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 309 - 344
Target Start/End: Complemental strand, 38519159 - 38519124
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacataagc 344  Q
    ||||||||||||||||||||||||||||||||||||    
T  38519159 ggaataaaatttagtaaacttgtaacaaacataagc 38519124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 47845473 - 47845422
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaata 129  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| ||||    
T  47845473 gtttgttttaactttatcaaatttatttttagcaataacatttcttggaata 47845422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 257
Target Start/End: Complemental strand, 52186262 - 52186195
Alignment:
Q  190 taatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctc 257  Q
    ||||||||||||||||||| ||| |||| ||| ||||||||| |||| ||  ||||||||||||||||    
T  52186262 taatattcttagaaaccataaaaatagaaattataataggtaactatgtagaaatttattcacatctc 52186195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 115
Target Start/End: Complemental strand, 11014879 - 11014842
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataa 115  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  11014879 gtttgttttaaatttatcaaatttatttttaggaataa 11014842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 37336694 - 37336617
Alignment:
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    ||||||||||||| || ||||||| | ||||||||| ||| |||||||| |||||||||  |||  ||||||||||||    
T  37336694 atgtttggttaacattttaatattttaagaaaccataaaaatagagattataataggtaattatacatgaatttattc 37336617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 1597439 - 1597407
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  1597439 ggaataaaatttagtaaacttgtaacaaacata 1597407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 2430471 - 2430503
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  2430471 ggaataaaatttagtaaacttgtaacaaacata 2430503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 151
Target Start/End: Original strand, 2632584 - 2632656
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattcca 151  Q
    ||||||| |||||||  |||||||||| ||||||||| ||| |||  |||||||| |||| ||||||||||||    
T  2632584 tttgtttcaagtttactaaatttatttctaggaataacattccttagaatataaatatgggaattttattcca 2632656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 3939514 - 3939550
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacataagc 344  Q
    ||||||||||||||| |||||||||||||||||||||    
T  3939514 aggaataaaatttagcaaacttgtaacaaacataagc 3939550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 5518601 - 5518569
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  5518601 ggaataaaatttagtaaacttgtaacaaacata 5518569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 12190274 - 12190242
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  12190274 ggaataaaatttagtaaacttgtaacaaacata 12190242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 20260183 - 20260151
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  20260183 ggaataaaatttagtaaacttgtaacaaacata 20260151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 36361757 - 36361789
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  36361757 ggaataaaatttagtaaacttgtaacaaacata 36361789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 231
Target Start/End: Complemental strand, 38519402 - 38519253
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| || |||| ||||||||||  ||||||||| |||| ||| || ||||| ||| ||||||||||||||    | |||||         |||||    
T  38519402 gtttgtttcaaatttaccaaatttattcgtaggaataacattttttggaacataaaaatgaaaattttattccaa----tgtatttagaaaaaagatgtt 38519307  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggta 231  Q
    || ||||| ||||||||||||| |||||||| ||| ||| |||| |||||||||    
T  38519306 tgtttaacattataatattcttggaaaccataaaaatagggattataataggta 38519253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 39329583 - 39329615
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  39329583 ggaataaaatttagtaaacttgtaacaaacata 39329615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 46666683 - 46666715
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  46666683 ggaataaaatttagtaaacttgtaacaaacata 46666715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 46960602 - 46960634
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  46960602 ggaataaaatttagtaaacttgtaacaaacata 46960634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 341
Target Start/End: Complemental strand, 20505085 - 20505054
Alignment:
Q  310 gaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||    
T  20505085 gaataaaatttagtaaacttgtaacaaacata 20505054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 341
Target Start/End: Original strand, 29091642 - 29091673
Alignment:
Q  310 gaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||    
T  29091642 gaataaaatttagtaaacttgtaacaaacata 29091673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 37261549 - 37261620
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||||||| |||||||||||||||||||||| || ||| |||  ||| |||||||| |||  ||||||||||    
T  37261549 gtttgtttcaagtttatcaaatttatttttatgattaacattcattggaatataaatatgtgaattttattc 37261620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 148
Target Start/End: Complemental strand, 50191111 - 50191036
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttatt 148  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||  ||||||||||||  |||||||||    
T  50191111 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttagaatataaagatgagaattttatt 50191036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 341
Target Start/End: Original strand, 52630749 - 52630780
Alignment:
Q  310 gaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||    
T  52630749 gaataaaatttagtaaacttgtaacaaacata 52630780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 341
Target Start/End: Complemental strand, 13931979 - 13931949
Alignment:
Q  311 aataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||    
T  13931979 aataaaatttagtaaacttgtaacaaacata 13931949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 341
Target Start/End: Original strand, 32824899 - 32824929
Alignment:
Q  311 aataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||    
T  32824899 aataaaatttagtaaacttgtaacaaacata 32824929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 342
Target Start/End: Original strand, 35187430 - 35187464
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacataa 342  Q
    ||||||||| |||||||||||||||||||||||||    
T  35187430 aggaataaattttagtaaacttgtaacaaacataa 35187464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 341
Target Start/End: Complemental strand, 37436716 - 37436686
Alignment:
Q  311 aataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||    
T  37436716 aataaaatttagtaaacttgtaacaaacata 37436686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 341
Target Start/End: Complemental strand, 48916117 - 48916087
Alignment:
Q  311 aataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||    
T  48916117 aataaaatttagtaaacttgtaacaaacata 48916087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 338
Target Start/End: Original strand, 1007722 - 1007751
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaac 338  Q
    ||||||||||||||||||||||||||||||    
T  1007722 ggaataaaatttagtaaacttgtaacaaac 1007751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 6978744 - 6978777
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  6978744 aggaataaattttagtaaacttgtaacaaacata 6978777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 9115811 - 9115844
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  9115811 aggaataaattttagtaaacttgtaacaaacata 9115844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 339
Target Start/End: Original strand, 13521297 - 13521326
Alignment:
Q  310 gaataaaatttagtaaacttgtaacaaaca 339  Q
    ||||||||||||||||||||||||||||||    
T  13521297 gaataaaatttagtaaacttgtaacaaaca 13521326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 338
Target Start/End: Original strand, 13653826 - 13653855
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaac 338  Q
    ||||||||||||||||||||||||||||||    
T  13653826 ggaataaaatttagtaaacttgtaacaaac 13653855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 17475418 - 17475385
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacataa 342  Q
    ||||||||||||||||||||| ||||||||||||    
T  17475418 ggaataaaatttagtaaacttataacaaacataa 17475385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 24116432 - 24116399
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacataa 342  Q
    ||||||||||||||||||||||| ||||||||||    
T  24116432 ggaataaaatttagtaaacttgtgacaaacataa 24116399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 25789737 - 25789770
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  25789737 aggaataaattttagtaaacttgtaacaaacata 25789770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 39930431 - 39930464
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  39930431 aggaataaattttagtaaacttgtaacaaacata 39930464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 47037431 - 47037464
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  47037431 aggaataaattttagtaaacttgtaacaaacata 47037464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 338
Target Start/End: Complemental strand, 50190862 - 50190833
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaac 338  Q
    ||||||||||||||||||||||||||||||    
T  50190862 ggaataaaatttagtaaacttgtaacaaac 50190833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 2632827 - 2632859
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||| |||||||||||||||||||    
T  2632827 ggaataaaatttaataaacttgtaacaaacata 2632859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 4683471 - 4683439
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||| ||||||||||||||    
T  4683471 ggaataaaatttagtaaatttgtaacaaacata 4683439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 8331989 - 8332021
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||| ||||||||||    
T  8331989 ggaataaaatttagtaaacttgcaacaaacata 8332021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 17475656 - 17475576
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| ||| |||| ||||||||||||||||||  || |||||| |||   || || ||||| |||||||||||||||||||    
T  17475656 ggtgtgttcgtttcaagtttatcaaatttattcctaagaataacattctatggaaaataaaaatggaaattttattccaag 17475576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 30240984 - 30241016
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||| |||||||||||||||||||    
T  30240984 ggaataaaatttaataaacttgtaacaaacata 30241016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 37261822 - 37261854
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||| |||||||||||||||||||    
T  37261822 ggaataaaatttaataaacttgtaacaaacata 37261854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 337
Target Start/End: Complemental strand, 52186143 - 52186115
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaa 337  Q
    |||||||||||||||||||||||||||||    
T  52186143 ggaataaaatttagtaaacttgtaacaaa 52186115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 1e-39; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 8029027 - 8029263
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||||||||||||||||||| ||    ||        |    
T  8029027 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatggaaattttattccaagaaat----ttaggaaaaat 8029122  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||  ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  8029123 atgtttggttggctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttat 8029222  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||||||||||||  | ||||||| |||||||    
T  8029223 tcccacccttttctttgggaaattttttctattcccaggaa 8029263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 68 - 312
Target Start/End: Complemental strand, 7053930 - 7053689
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||| |||||||||| |||||||||| ||| |||| |||||||| |||| ||||||||||||||  || |||          
T  7053930 cttagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaatatgggaattttattccaaggaatttat----ga 7053835  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaac 266  Q
        |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||    
T  7053834 aaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaac 7053735  T
Q  267 tttattctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||||||| || ||||||| ||||||||  | ||||||| |||||||    
T  7053734 tttattcccaccattttccttgggaaattttttctattcccaggaa 7053689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 68 - 293
Target Start/End: Original strand, 16968644 - 16968866
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||||| |||  ||| ||||||||||||  ||||||||||||||  ||    ||        
T  16968644 cttaaggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattctttggaatataaagatgagaattttattccaaggaat----ttagga 16968739  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaac 266  Q
        |||||||||||| ||||||||||||||||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||    
T  16968740 aaaatatgtttggttagctttataatattcttaggaaccataaaaatagggattataataggtaaactatttatgaatttattctcatctccataggaac 16968839  T
Q  267 tttattctcatcattttctttgggaaa 293  Q
    ||||||| || | ||||| ||||||||    
T  16968840 tttattcccacccttttccttgggaaa 16968866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 273
Target Start/End: Complemental strand, 10246468 - 10246266
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        
T  10246468 cttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttagga 10246373  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaac 266  Q
        |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||    
T  10246372 aaaatatgtttggttagctttataatattcctaggaaccataaaattagggattataataggtaaactatttatgaatttattcccatctccatgggaac 10246273  T
Q  267 tttattc 273  Q
    |||||||    
T  10246272 tttattc 10246266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 73 - 293
Target Start/End: Original strand, 18897645 - 18897862
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  18897645 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaat 18897740  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| |||  ||| |||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  18897741 atgtttggttagctttataatattcctaggaaccataaaaataggaattataataggtaaactatttatgaatttattcccatctccatgggaactttat 18897840  T
Q  272 tctcatcattttctttgggaaa 293  Q
    |  || | ||||| ||||||||    
T  18897841 ttccacccttttccttgggaaa 18897862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 73 - 312
Target Start/End: Original strand, 2657424 - 2657660
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  2657424 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaat 2657519  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatct-atttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||||||||||||||||| ||| || ||| ||| ||  |||| ||||||| |  | |||||||||||||||| ||||||||| ||||||||||    
T  2657520 atgtttggttaactttataatattcctagtaatcataaaaatatggattataataggaaaattatttatgaatttattcccatctccatgggaactttat 2657619  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    || || | ||||| ||||||||  | ||||||| |||||||    
T  2657620 tcccacccttttccttgggaaattttttctattcccaggaa 2657660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 78 - 273
Target Start/End: Original strand, 14170744 - 14170935
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||| ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        ||||||    
T  14170744 gtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaggaaaaatatgtt 14170839  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattcacatctccattggaactttattc 273  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | |||||||||||||||||| ||||||||| ||||||||||||    
T  14170840 tggttagctttataatattcctaggaaccataaaaatagggattgtaataggtaaactatttatgaatttattc-catctccatgggaactttattc 14170935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 73 - 293
Target Start/End: Original strand, 1316743 - 1316960
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| |||  ||| ||||||||||||  ||||||||||||||  ||    ||        |    
T  1316743 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattctttggaatataaagatgagaattttattccaaggaat----ttaggaaaaat 1316838  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||| ||| ||||||||||    
T  1316839 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatcttcatgggaactttat 1316938  T
Q  272 tctcatcattttctttgggaaa 293  Q
    || || | ||||| ||||||||    
T  1316939 tcccacccttttccttgggaaa 1316960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 187 - 312
Target Start/End: Complemental strand, 7344320 - 7344194
Alignment:
Q  187 ttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctcatcattttct 285  Q
    ||||||||||| ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| || | |||||     
T  7344320 ttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattcccatctccatgggaactttattcccacccttttcc 7344221  T
Q  286 ttgggaaaaatattctatttccaggaa 312  Q
    ||||||||  | ||||||| |||||||    
T  7344220 ttgggaaattttttctattcccaggaa 7344194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 346053 - 345950
Alignment:
Q  201 gaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattctcatcattttctttgggaaaaatattc 300  Q
    |||||||| ||| |||  ||||||||||| |  || | |||||||||||| |||||||||||||||||||||| || | ||||||||||||||||| |||    
T  346053 gaaaccataaaaataggaattttaataggaaattactcatgaatttattctcatctccattggaactttattcccacccttttctttgggaaaaattttc 345954  T
Q  301 tatt 304  Q
    ||||    
T  345953 tatt 345950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 21008321 - 21008246
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||||| |||||||| ||||||||||||| |||||| |||||||| ||||||||||||  ||||||||||||||    
T  21008321 gtttgtttcaagtttattaaatttatttttatgaataacatttcttggaatataaagatgagaattttattccaag 21008246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 149
Target Start/End: Complemental strand, 6706094 - 6706023
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||||||| ||||||| ||| ||||||| ||||||||| ||| |||||||||||||||||  ||||||||||    
T  6706094 gtttgtttcaagtttaccaattttatttctaggaataacattccttgaaatataaagatgagaattttattc 6706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 157
Target Start/End: Original strand, 8314622 - 8314702
Alignment:
Q  77 cgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatat 157  Q
    ||||||||||||||||||||||||||||  ||| | ||| ||| |||| |||||| | ||| ||||||||||| |||||||    
T  8314622 cgtttgttttaagtttatcaaatttattcctagaattaacattacttgcaatatacacatgtaaattttattctaagatat 8314702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 14170975 - 14171019
Alignment:
Q  297 attctatttccaggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||    
T  14170975 attttatatccaggaataaaatttagtaaacttgtaacaaacata 14171019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 306 - 341
Target Start/End: Complemental strand, 7053670 - 7053635
Alignment:
Q  306 ccaggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||||||    
T  7053670 ccaggaataaaatttagtaaacttgtaacaaacata 7053635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 6705950 - 6705876
Alignment:
Q  238 tatgaatttattcacatctccattggaactttattctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    |||||| |||||| ||||||||| |||||||||||| || | ||||||||||||| | | ||||||| |||||||    
T  6705950 tatgaaattattctcatctccatgggaactttattcccacccttttctttgggaacatttttctattcccaggaa 6705876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 7344831 - 7344765
Alignment:
Q  83 ttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    ||||||||||||||||||||||  ||||||||| ||| |||| |||||||| |||  ||||||||||    
T  7344831 ttttaagtttatcaaatttattcctaggaataacattccttggaatataaatatgagaattttattc 7344765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 6705863 - 6705830
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||||    
T  6705863 aggaataaaatttagtaaacttgtaacaaacata 6705830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 14781718 - 14781685
Alignment:
Q  308 aggaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||||    
T  14781718 aggaataaaatttagtaaacttgtaacaaacata 14781685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 2657674 - 2657706
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  2657674 ggaataaaatttagtaaacttgtaacaaacata 2657706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 8314887 - 8314919
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  8314887 ggaataaaatttagtaaacttgtaacaaacata 8314919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 341
Target Start/End: Complemental strand, 345927 - 345896
Alignment:
Q  310 gaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||    
T  345927 gaataaaatttagtaaacttgtaacaaacata 345896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 341
Target Start/End: Original strand, 16968900 - 16968931
Alignment:
Q  310 gaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||    
T  16968900 gaataaaatttagtaaacttgtaacaaacata 16968931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 304
Target Start/End: Original strand, 3869391 - 3869461
Alignment:
Q  237 ttatgaatttattcacatctccattggaactttattct---catcattttctttgggaaaaatattctatt 304  Q
    |||||||||||||| ||||| | | |||||||||||||   || ||||||||||||||||| | |||||||    
T  3869391 ttatgaatttattctcatcttcgtgggaactttattctcaccaccattttctttgggaaaacttttctatt 3869461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 81; Significance: 6e-38; HSPs: 5)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 76 - 312
Target Start/End: Original strand, 143340 - 143573
Alignment:
Q  76 gcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatg-gaaattttattccaagatatatatttnnnnnnnntat 174  Q
    |||||||||| ||||||| ||||||||||  ||||||||| ||| |||| |||||||||||| ||| ||||||| |||| |||    ||        |||    
T  143340 gcgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaatttttatttcaaggtat----ttggaaaaaatat 143435  T
Q  175 gtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattcacatctccattggaactttattct 274  Q
    ||||||||||||||||||||||| ||| |||||| ||| ||| |||| ||||||||| |||  ||||||||||||| ||||||||| ||||||||||||     
T  143436 gtttggttaactttataatattcctaggaaccataaaattagggattataataggtaactacatatgaatttattctcatctccatgggaactttattcc 143535  T
Q  275 catcattttctttgggaaaaatattctatttccaggaa 312  Q
    || ||||||||||||||||  | ||||||| |||||||    
T  143536 caccattttctttgggaaattttttctattcccaggaa 143573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 73 - 314
Target Start/End: Original strand, 201650 - 201887
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| |||||||||| |||  ||    ||        |    
T  201650 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattctaaggaat----ttaggaaaaat 201745  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatct-atttatgaatttattcacatctccattggaactttat 271  Q
    ||||||||||| ||||||| ||||| ||| |||||| ||| ||| |||| |||||||||  | |||||||||||||||| ||||||||| ||||||||||    
T  201746 atgtttggttagctttata-tattcctaggaaccataaaaatagggattataataggtaaattatttatgaatttattctcatctccatgggaactttat 201844  T
Q  272 tctcatcattttctttgggaaaaatattctatttccaggaata 314  Q
    || || | ||||| ||||||||  | ||||||| |||||||||    
T  201845 tcccacccttttccttgggaaattttttctattcccaggaata 201887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 341
Target Start/End: Original strand, 119295 - 119326
Alignment:
Q  310 gaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||    
T  119295 gaataaaatttagtaaacttgtaacaaacata 119326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 341
Target Start/End: Original strand, 201901 - 201931
Alignment:
Q  311 aataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||    
T  201901 aataaaatttagtaaacttgtaacaaacata 201931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 338
Target Start/End: Original strand, 143587 - 143616
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaac 338  Q
    ||||||||||||||||||||||||||||||    
T  143587 ggaataaaatttagtaaacttgtaacaaac 143616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 78 - 312
Target Start/End: Complemental strand, 29294 - 29063
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||| ||||||||||||||||||||||  || |||||| |||| ||| ||||||||||| | ||||||||||||||  ||    ||        ||||||    
T  29294 gtttattttaagtttatcaaatttattcctatgaataacattttttggaatataaagataggaattttattccaaggaat----ttagaaaaaatatgtt 29199  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtat-ctatttatgaatttattcacatctccattggaactttattctca 276  Q
    |||||| ||||||||||||| ||| ||  || ||| ||| |||| ||||||| |  |||||||||||||||||| ||| ||||| |||||||||||| ||    
T  29198 tggttagctttataatattcctaggaattataaaaatagggattataataggaaaactatttatgaatttattctcatttccatgggaactttattccca 29099  T
Q  277 tcattttctttgggaaaaatattctatttccaggaa 312  Q
     | ||||| ||| ||||  | ||||||| |||||||    
T  29098 cccttttccttgagaaattttttctattcccaggaa 29063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 29049 - 29017
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  29049 ggaataaaatttagtaaacttgtaacaaacata 29017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 23683 - 23604
Alignment:
Q  69 ttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||||||  |||| ||||||||||| |||||||||||||| ||||||||||||||| |||||||| |||| ||||||||||    
T  23683 ttaaggtttgtttattttaagtttaccaaatttatttttaagaataatatttcttggaatataaaaatgg-aattttattc 23604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 341
Target Start/End: Complemental strand, 23392 - 23361
Alignment:
Q  310 gaataaaatttagtaaacttgtaacaaacata 341  Q
    ||||||||||||||||||||||||||||||||    
T  23392 gaataaaatttagtaaacttgtaacaaacata 23361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 43435 - 43365
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttatt 148  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||  ||||||||||||  |||||||||    
T  43435 gtttattttaagtttgtcaaatttatttttaggaataatattttttagaatataaagatgtgaattttatt 43365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 3662 - 3630
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  3662 ggaataaaatttagtaaacttgtaacaaacata 3630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 312
Target Start/End: Complemental strand, 3736 - 3676
Alignment:
Q  252 catctccattggaactttattctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||||||||| |||||||||||| || ||||||||||| ||||| | ||||||| |||||||    
T  3736 catctccatgggaactttattcccaccattttctttgagaaaacttttctattcccaggaa 3676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 157
Target Start/End: Complemental strand, 3912 - 3828
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatat 157  Q
    |||| |||||||| ||||  | ||||||||||  || |||||| ||| |||| ||||||||||| | |||||||||||||| |||    
T  3912 ggtgtgtttgtttcaagtgcaccaaatttattcctatgaataacattccttggaatataaagataggaattttattccaaggtat 3828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 312
Target Start/End: Original strand, 4368 - 4428
Alignment:
Q  252 catctccattggaactttattctcatcattttctttgggaaaaatattctatttccaggaa 312  Q
    ||||||||| |||||||||||| || ||||||||||| ||||| | ||||||| |||||||    
T  4368 catctccatgggaactttattcccaccattttctttgagaaaacttttctattcccaggaa 4428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 4442 - 4474
Alignment:
Q  309 ggaataaaatttagtaaacttgtaacaaacata 341  Q
    |||||||||||||||||||||||||||||||||    
T  4442 ggaataaaatttagtaaacttgtaacaaacata 4474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 4190 - 4270
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||||| ||||  | ||||||||||  || |||||| ||| |||| ||||||||||| | ||||||||||||||    
T  4190 ggtgtgtttgtttcaagtgcaccaaatttattcctatgaataacattccttggaatataaagataggaattttattccaag 4270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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