View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14238_high_17 (Length: 218)
Name: NF14238_high_17
Description: NF14238
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14238_high_17 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 186; Significance: 1e-101; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 1482291 - 1482102
Alignment:
| Q |
14 |
aatattaagtgtgtaatctttgattttggttggccccattcttttatagcattcactgcagcctcctttcctagtctaggcacctctaccaccaccatgt |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1482291 |
aatattaagtgtgtaatctttgattttggttggccccattcttttatagccttcactgcagcctcctttcctagtctaggcacctctaccaccaccatgt |
1482192 |
T |
 |
| Q |
114 |
cttgcctagcatccaatgaaggtgccatgtattcgcatacactaggattttctttcaaaatctcttcagtaagatacatgtatctcctct |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1482191 |
cttgcctagcatccaatgaaggtgccatgtattcgcatacactaggattttctttcaaaatctcttcagtaagatacatgtatctcctct |
1482102 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 1478091 - 1477908
Alignment:
| Q |
20 |
aagtgtgtaatctttgattttggttggccccattcttttatagcattcactgcagcctcctttcctagtctaggcacctctaccaccaccatgtcttgcc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| |||| |
|
|
| T |
1478091 |
aagtgtgtaatctttgattttggttggccccattcttttatagctttcactgcagcctcctttcctagtctaggtacttctaccaccaccatgtcctgcc |
1477992 |
T |
 |
| Q |
120 |
tagcatccaatgaaggtgccatgtattcgcatacactaggattttctttcaaaatctcttcagtaagatacatgtatctcctct |
203 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
1477991 |
tagcatccaatgacggtgccatgtattcacatacacttggattttctttcaaaatttcttcggtaagatacatgtatctcctct |
1477908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 1492263 - 1492082
Alignment:
| Q |
17 |
attaagtgtgtaatctttgattttggttggccccattcttttatagcattcactgcagcctcctttcctagtctaggcacctctaccaccaccatgtctt |
116 |
Q |
| |
|
|||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||| |
|
|
| T |
1492263 |
attaagtgagtaatctttgactttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccaccatgtctt |
1492164 |
T |
 |
| Q |
117 |
gcctagcatccaatgaaggtgccatgtattcgcatacactaggattttctttcaaaatctcttcagtaagatacatgtatct |
198 |
Q |
| |
|
| ||||||||||||||||||||||||||||| || ||| ||||||| ||||| |||||||| || || |||||||||||||| |
|
|
| T |
1492163 |
gtctagcatccaatgaaggtgccatgtattcacaaacattaggattctcttttaaaatctcctctgttagatacatgtatct |
1492082 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 1505072 - 1504886
Alignment:
| Q |
17 |
attaagtgtgtaatctttgattttggttggccccattcttttatagcattcactgcagcctcctttcctagtctaggcacctctaccaccaccatgtctt |
116 |
Q |
| |
|
|||||||| ||||||||||| ||||| || ||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
1505072 |
attaagtgagtaatctttgactttggctgaccccattcttttatagcttttacggcagcctcctttcctagtctaggtacctctaccaccaccatgtctt |
1504973 |
T |
 |
| Q |
117 |
gcctagcatccaatgaaggtgccatgtattcgcatacactaggattttctttcaaaatctcttcagtaagatacatgtatctcctct |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||| || ||||| ||||| ||||| |||||||| || || || ||||||||||| |||| |
|
|
| T |
1504972 |
gcctagcatccaatgaaggtgccatgtattcacaaacactgggattctcttttaaaatctcctctgttaggtacatgtatcttctct |
1504886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 1509219 - 1509033
Alignment:
| Q |
17 |
attaagtgtgtaatctttgattttggttggccccattcttttatagcattcactgcagcctcctttcctagtctaggcacctctaccaccaccatgtctt |
116 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||| |||| |||||||| ||||| |||| ||| ||||||||||||| |
|
|
| T |
1509219 |
attaaatgtgtaatctttgattttggctggccccattcttttatagccttcactgcaacctcttttcctagcctaggtacctttacaaccaccatgtctt |
1509120 |
T |
 |
| Q |
117 |
gcctagcatccaatgaaggtgccatgtattcgcatacactaggattttctttcaaaatctcttcagtaagatacatgtatctcctct |
203 |
Q |
| |
|
|||||||||||||||| |||||| | || | || ||| | ||||| ||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
1509119 |
gcctagcatccaatgatggtgccgtataagcacaaacattgggattctctttcaaaatctcttctgtaatatacatgtatctcctct |
1509033 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 1486768 - 1486579
Alignment:
| Q |
14 |
aatattaagtgtgtaatctttgattttggttggccccattcttttatagcattcactgcagcctcctttcctagtctaggcacctctaccaccaccatgt |
113 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||| |||||||| |||||||| ||| ||||||||||| |
|
|
| T |
1486768 |
aatattaagtgtgtaatctttgactttggttggccctattcttttatagctttcactgcagcctcatttcctagcctaggcacgtctcgcaccaccatgt |
1486669 |
T |
 |
| Q |
114 |
cttgcctagcatccaatgaaggtgccatgtattcgcatacactaggattttctttcaaaatctcttcagtaagatacatgtatctcctct |
203 |
Q |
| |
|
|||||||||||||||| ||||||| ||| || ||| | | ||||||| ||||||||||| |||| || | ||||||||||| |||| |
|
|
| T |
1486668 |
cttgcctagcatccaaagaaggtgtcatataagtgcaaaaattaggattctctttcaaaatagcttctgtttggtacatgtatcttctct |
1486579 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 1499335 - 1499215
Alignment:
| Q |
17 |
attaagtgtgtaatctttgattttggttggccccattcttttatagcattcactgcagcctcctttcctagtctaggcacctctaccaccaccatgtctt |
116 |
Q |
| |
|
||||| |||||||| ||||| || ||||| |||||||||| ||||| ||||||||||||||||| ||||||||||| | ||||||| ||| |||||||| |
|
|
| T |
1499335 |
attaaatgtgtaatatttgacttcggttgaccccattcttcgatagccttcactgcagcctccttccctagtctaggtatctctaccgccatcatgtctt |
1499236 |
T |
 |
| Q |
117 |
gcctagcatccaatgaaggtg |
137 |
Q |
| |
|
||||||||||||| ||||||| |
|
|
| T |
1499235 |
gcctagcatccaaagaaggtg |
1499215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 143; Significance: 3e-75; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 5302591 - 5302405
Alignment:
| Q |
17 |
attaagtgtgtaatctttgattttggttggccccattcttttatagcattcactgcagcctcctttcctagtctaggcacctctaccaccaccatgtctt |
116 |
Q |
| |
|
|||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
5302591 |
attaagtgagtaatctttgactttggttgaccccattcttttatagccttcactgcagcctcctttcctagtctaggtacctctaccaccaccatgtctt |
5302492 |
T |
 |
| Q |
117 |
gcctagcatccaatgaaggtgccatgtattcgcatacactaggattttctttcaaaatctcttcagtaagatacatgtatctcctct |
203 |
Q |
| |
|
||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||| ||||| || ||||||||||||||||||| |
|
|
| T |
5302491 |
gcctagcatccaatgaaggggccatgtattcacaaacactaggattttctttcaaaatttcttctgttagatacatgtatctcctct |
5302405 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 5310492 - 5310306
Alignment:
| Q |
17 |
attaagtgtgtaatctttgattttggttggccccattcttttatagcattcactgcagcctcctttcctagtctaggcacctctaccaccaccatgtctt |
116 |
Q |
| |
|
|||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
5310492 |
attaagtgagtaatctttgactttggttgaccccattcttttatagccttcactgcagcctcctttcctagtctaggtacctctaccaccaccatgtctt |
5310393 |
T |
 |
| Q |
117 |
gcctagcatccaatgaaggtgccatgtattcgcatacactaggattttctttcaaaatctcttcagtaagatacatgtatctcctct |
203 |
Q |
| |
|
|||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| || || ||||||||||||||||||| |
|
|
| T |
5310392 |
gccttgcatccaatgaaggtgccatgtattcacaaacactaggattttctttcaaaatctcctctgttagatacatgtatctcctct |
5310306 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 5284403 - 5284217
Alignment:
| Q |
17 |
attaagtgtgtaatctttgattttggttggccccattcttttatagcattcactgcagcctcctttcctagtctaggcacctctaccaccaccatgtctt |
116 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
5284403 |
attaagtgagtaatctttgactttggttggccccattcttttatagccttcactgcagcctcctttcctagtctaggtacctctaccaccaccatgtctt |
5284304 |
T |
 |
| Q |
117 |
gcctagcatccaatgaaggtgccatgtattcgcatacactaggattttctttcaaaatctcttcagtaagatacatgtatctcctct |
203 |
Q |
| |
|
|||| |||||||||||||| ||||||||||| || ||||||||||||| ||||||||| ||||| || ||||||||||||||||||| |
|
|
| T |
5284303 |
gccttgcatccaatgaaggggccatgtattcacaaacactaggattttttttcaaaatttcttctgttagatacatgtatctcctct |
5284217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 17 - 203
Target Start/End: Original strand, 5289724 - 5289910
Alignment:
| Q |
17 |
attaagtgtgtaatctttgattttggttggccccattcttttatagcattcactgcagcctcctttcctagtctaggcacctctaccaccaccatgtctt |
116 |
Q |
| |
|
|||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
5289724 |
attaagtgagtaatctttgactttggttgaccccattcttttatagccttcactgcagcctcctttcctagtctaggtacctctaccaccaccatgtctt |
5289823 |
T |
 |
| Q |
117 |
gcctagcatccaatgaaggtgccatgtattcgcatacactaggattttctttcaaaatctcttcagtaagatacatgtatctcctct |
203 |
Q |
| |
|
||||||||||||||||||| ||||||||||| || ||||| ||||||||||||||||| ||||| || ||||||||||||||||||| |
|
|
| T |
5289824 |
gcctagcatccaatgaaggggccatgtattcacaaacacttggattttctttcaaaatttcttctgttagatacatgtatctcctct |
5289910 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 5315206 - 5315020
Alignment:
| Q |
17 |
attaagtgtgtaatctttgattttggttggccccattcttttatagcattcactgcagcctcctttcctagtctaggcacctctaccaccaccatgtctt |
116 |
Q |
| |
|
|||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
5315206 |
attaagtgagtaatctttgactttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtctt |
5315107 |
T |
 |
| Q |
117 |
gcctagcatccaatgaaggtgccatgtattcgcatacactaggattttctttcaaaatctcttcagtaagatacatgtatctcctct |
203 |
Q |
| |
|
||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||| ||||| || ||||||||||||||||||| |
|
|
| T |
5315106 |
gcctagcatccaatgaaggggccatgtattcacaaacactaggattttctttcaaaatttcttctgttagatacatgtatctcctct |
5315020 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 17 - 203
Target Start/End: Original strand, 46707015 - 46707201
Alignment:
| Q |
17 |
attaagtgtgtaatctttgattttggttggccccattcttttatagcattcactgcagcctcctttcctagtctaggcacctctaccaccaccatgtctt |
116 |
Q |
| |
|
|||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
46707015 |
attaagtgggtaatctttgactttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtctt |
46707114 |
T |
 |
| Q |
117 |
gcctagcatccaatgaaggtgccatgtattcgcatacactaggattttctttcaaaatctcttcagtaagatacatgtatctcctct |
203 |
Q |
| |
|
|||| |||||||||||||||||||| ||||| || ||||| ||||| |||||||||||||| | || || |||||||||||||||| |
|
|
| T |
46707115 |
gcctggcatccaatgaaggtgccatatattcacaaacactgggattctctttcaaaatctcctatgttaggtacatgtatctcctct |
46707201 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 124; Significance: 6e-64; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 44128666 - 44128483
Alignment:
| Q |
20 |
aagtgtgtaatctttgattttggttggccccattcttttatagcattcactgcagcctcctttcctagtctaggcacctctaccaccaccatgtcttgcc |
119 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
44128666 |
aagtgagtaatctttgactttggttgaccccattcttttatggccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgcc |
44128567 |
T |
 |
| Q |
120 |
tagcatccaatgaaggtgccatgtattcgcatacactaggattttctttcaaaatctcttcagtaagatacatgtatctcctct |
203 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| || || || ||||| |||||||||| |
|
|
| T |
44128566 |
tagcatccaatgaaggtgccatgtattcacaaacactaggattctctttcaaaatctcctctgttaggtacatatatctcctct |
44128483 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 44132871 - 44132688
Alignment:
| Q |
20 |
aagtgtgtaatctttgattttggttggccccattcttttatagcattcactgcagcctcctttcctagtctaggcacctctaccaccaccatgtcttgcc |
119 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
44132871 |
aagtgagtaatctttgactttggttgaccccattcttttatggccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgcc |
44132772 |
T |
 |
| Q |
120 |
tagcatccaatgaaggtgccatgtattcgcatacactaggattttctttcaaaatctcttcagtaagatacatgtatctcctct |
203 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| || || || ||||| |||||||||| |
|
|
| T |
44132771 |
tagcatccaatgaaggtgccatgtattcacaaacactaggattctctttcaaaatctcctctgttaggtacatatatctcctct |
44132688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 44141293 - 44141110
Alignment:
| Q |
20 |
aagtgtgtaatctttgattttggttggccccattcttttatagcattcactgcagcctcctttcctagtctaggcacctctaccaccaccatgtcttgcc |
119 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
44141293 |
aagtgagtaatctttgactttggttgaccccattcttttatggccttcactgcagcctccttccctagtctaggtacctctaccaccaccatgtcttgcc |
44141194 |
T |
 |
| Q |
120 |
tagcatccaatgaaggtgccatgtattcgcatacactaggattttctttcaaaatctcttcagtaagatacatgtatctcctct |
203 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| || || || ||||| |||||||||| |
|
|
| T |
44141193 |
tagcatccaatgaaggtgccatgtattcacaaacactaggattctctttcaaaatctcctctgttaggtacatatatctcctct |
44141110 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 24163814 - 24164003
Alignment:
| Q |
14 |
aatattaagtgtgtaatctttgattttggttggccccattcttttatagcattcactgcagcctcctttcctagtctaggcacctctaccaccaccatgt |
113 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| || ||||||||||||||||| || ||||||| |||||||||| |
|
|
| T |
24163814 |
aatattaagtgtgtgatctttgactttggttggccccattcttttatagccttcacggctgcctcctttcctagtcttggtgcctctactaccaccatgt |
24163913 |
T |
 |
| Q |
114 |
cttgcctagcatccaatgaaggtgccatgtattcgcatacactaggattttctttcaaaatctcttcagtaagatacatgtatctcctct |
203 |
Q |
| |
|
||||||||| |||||| ||||||||||| || ||| | ||||||| ||||||||||||||||| || || |||||||||||||||| |
|
|
| T |
24163914 |
cttgcctagtatccaaagaaggtgccatataagtgcacaagttaggattctctttcaaaatctcttcggttaggtacatgtatctcctct |
24164003 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 74 - 199
Target Start/End: Original strand, 37859448 - 37859573
Alignment:
| Q |
74 |
gcctcctttcctagtctaggcacctctaccaccaccatgtcttgcctagcatccaatgaaggtgccatgtattcgcatacactaggattttctttcaaaa |
173 |
Q |
| |
|
||||| ||||||||||| || ||||| || |||||||||||||| || ||||||||||||||||||||||| ||||||||||| ||||| ||||||| | |
|
|
| T |
37859448 |
gcctcttttcctagtcttggtacctccacaaccaccatgtcttgtcttgcatccaatgaaggtgccatgtactcgcatacacttggattctctttcagga |
37859547 |
T |
 |
| Q |
174 |
tctcttcagtaagatacatgtatctc |
199 |
Q |
| |
|
||||||| || | |||||||||||| |
|
|
| T |
37859548 |
tctcttctgtcaagtacatgtatctc |
37859573 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 26 - 199
Target Start/End: Original strand, 37863426 - 37863599
Alignment:
| Q |
26 |
gtaatctttgattttggttggccccattcttttatagcattcactgcagcctcctttcctagtctaggcacctctaccaccaccatgtcttgcctagcat |
125 |
Q |
| |
|
||||||||||| || ||||| |||||||| || ||||| || ||||||||| |||||||| | || || || || |||||||| || || || |||| |
|
|
| T |
37863426 |
gtaatctttgacttaggttgaccccattccttgatagcctttgttgcagcctcttttcctagctttggtacttccacaaccaccatatcctgtcttgcat |
37863525 |
T |
 |
| Q |
126 |
ccaatgaaggtgccatgtattcgcatacactaggattttctttcaaaatctcttcagtaagatacatgtatctc |
199 |
Q |
| |
|
|||| ||||||||||| || || |||| ||||||||| || ||||||||||||||||| | || |||||||||| |
|
|
| T |
37863526 |
ccaacgaaggtgccatatactcacataaactaggattctccttcaaaatctcttcagtcaaatgcatgtatctc |
37863599 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 35250831 - 35250779
Alignment:
| Q |
92 |
ggcacctctaccaccaccatgtcttgcctagcatccaatgaaggtgccatgta |
144 |
Q |
| |
|
||||||||||| |||||||| ||||| || ||||||||||| ||||||||||| |
|
|
| T |
35250831 |
ggcacctctactaccaccatatcttgtcttgcatccaatgatggtgccatgta |
35250779 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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