View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14239_high_23 (Length: 236)
Name: NF14239_high_23
Description: NF14239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14239_high_23 |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 13 - 221
Target Start/End: Original strand, 12004747 - 12004955
Alignment:
| Q |
13 |
cacagacactaaaaccaagacaatatcaacgttgaataatcgtcaatatttaaatctgattgattaatatgtactaatgatgaggctgatttatatgtat |
112 |
Q |
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| T |
12004747 |
cacagacactaaaaccaagacaatatcaacgttgaataatcgtcaatatttaaatctgattgattaatatgtactaatgatgaggctgatttatatgtat |
12004846 |
T |
|
| Q |
113 |
gtatggcttcattgaatttcatgttatttgtacggtgcaagatcttttctcaatgaaagttcgcacatacaagctttttgtttaatctgtcagcaatctc |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12004847 |
gtatggcttcattgaatttcatgttatttgtacggtgcaagatcttttctcaatgaaagttcgcacatacaagctttttgtttaatctgtcagcaatctc |
12004946 |
T |
|
| Q |
213 |
cttcctttt |
221 |
Q |
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| T |
12004947 |
cttcctttt |
12004955 |
T |
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