View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14240_low_8 (Length: 276)
Name: NF14240_low_8
Description: NF14240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14240_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 6393034 - 6393292
Alignment:
| Q |
1 |
gcttttgttttagacaaattttctcaagtggtgacgaggtggaatcaggttaatcatactggggaagggaatgaggatgatctcgggaaagatgatagat |
100 |
Q |
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| T |
6393034 |
gcttttgttttagacaagttttctcaagtggtgacgaggtggaatcaggttaatcatactggggaagggaatgaggatgatctcaggaaagatgatacat |
6393133 |
T |
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| Q |
101 |
ctcatatgattattgtcacagatgcttgtcttcctcttcttacttctggggagtctcccatgaatgctcatcttctcattaactacgagttaccgacaaa |
200 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
6393134 |
ctcatatgattatcgtcacagatgcttgtcttcctcttcttacttctggggagtctcccatgaatgctcatcttctcattaactacgagttaccggcaaa |
6393233 |
T |
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| Q |
201 |
aaaggtattctacttttcattttcttttctctaattcacatttaccttgcgactttctg |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6393234 |
aaaggtattctacttttcattttcttttctctaattcacatttaccttgcgactttctg |
6393292 |
T |
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