View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14241_low_5 (Length: 248)

Name: NF14241_low_5
Description: NF14241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14241_low_5
NF14241_low_5
[»] chr2 (25 HSPs)
chr2 (1-204)||(39136173-39136376)
chr2 (1-231)||(39474254-39474487)
chr2 (16-136)||(39458169-39458289)
chr2 (1-182)||(39422466-39422647)
chr2 (1-182)||(39416349-39416530)
chr2 (1-92)||(39129487-39129578)
chr2 (12-182)||(39488178-39488348)
chr2 (12-93)||(39601994-39602075)
chr2 (13-97)||(39151897-39151981)
chr2 (28-98)||(44623617-44623687)
chr2 (24-96)||(39214925-39214997)
chr2 (20-96)||(39450499-39450575)
chr2 (15-82)||(39123536-39123603)
chr2 (22-136)||(27154981-27155095)
chr2 (24-93)||(39382213-39382282)
chr2 (15-92)||(39495534-39495611)
chr2 (24-96)||(39199482-39199554)
chr2 (24-96)||(39399013-39399085)
chr2 (192-231)||(39136110-39136149)
chr2 (25-96)||(39220162-39220233)
chr2 (24-83)||(39391666-39391725)
chr2 (48-90)||(39479182-39479224)
chr2 (26-96)||(44614473-44614543)
chr2 (24-84)||(39161102-39161162)
chr2 (24-84)||(39208032-39208092)
[»] chr7 (1 HSPs)
chr7 (3-231)||(19806513-19806735)
[»] chr8 (1 HSPs)
chr8 (26-97)||(44951384-44951455)
[»] chr5 (1 HSPs)
chr5 (24-83)||(33559636-33559695)
[»] chr6 (1 HSPs)
chr6 (54-92)||(16112428-16112466)


Alignment Details
Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 39136376 - 39136173
Alignment:
Q  1 ttccaacatccctaatttcctttttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttctacttgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39136376 ttccaacatccctaatttcctttttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttctacttgtgt 39136277  T
Q  101 cttgcttctgatatcctcaaatgatttttctaccaacacaagtttttctttgagtgtggaaaatgatttatcagttgacatgtcgtcgtcgtcatcatca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39136276 cttgcttctgatatcctcaaatgatttttctaccaacacaagtttttctttgagtgtggaaaatgatttatcagttgacatgtcgtcgtcgtcatcatca 39136177  T
Q  201 tcat 204  Q
    ||||    
T  39136176 tcat 39136173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 39474254 - 39474487
Alignment:
Q  1 ttccaacatccctaatttcctttttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttctacttgtgt 100  Q
    |||||||||  ||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||  || ||||| ||| ||    
T  39474254 ttccaacatgactaattttctttttcttattttcaagctcttcggagcactcctcaatatctctctttatggaatgcaatctctccttttctatttgcgt 39474353  T
Q  101 cttgcttctgatatcctcaaatgatttttctaccaacacaagtttttctttgagtgtggaaaatgatttatcagttgacatgtc---gtcgtcgtcatca 197  Q
    | | |||  |  ||||||||||||||||||||| ||  |||||| ||  ||||||| ||||||||||||||| ||||||||| |     | || ||||||    
T  39474354 cgtcctttggcaatcctcaaatgatttttctacaaatgcaagttctttcttgagtgaggaaaatgatttatccgttgacatggcaggaacatcatcatca 39474453  T
Q  198 tcatcatatgttgttggagacaccttggatttct 231  Q
    |||||||||| |||||| ||||||||||||||||    
T  39474454 tcatcatatgatgttggggacaccttggatttct 39474487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 39458289 - 39458169
Alignment:
Q  16 tttcctttttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttctacttgtgtcttgcttctgatatc 115  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | ||| ||  |||    
T  39458289 tttcctttttcttgttttcaagatctttgcagcactcctcaatatctctctttatggactgcaatctcttctcttctacttgtctcgtccttttgcaatc 39458190  T
Q  116 ctcaaatgatttttctaccaa 136  Q
    |||||||||||||||||||||    
T  39458189 ctcaaatgatttttctaccaa 39458169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 39422466 - 39422647
Alignment:
Q  1 ttccaacatccctaatttcctttttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttctacttgtgt 100  Q
    |||||||||| ||||||||||||||||||||||| || |||| |||||||| |||||||||||||||||||||||||||| || |||||||||||| | |    
T  39422466 ttccaacatcactaatttcctttttcttattttccagctctttgcagcacttctcaatatctctctttatggactgcaatatcttctcttctacttctct 39422565  T
Q  101 ctt-gcttctgatatcctcaaatgatttttctaccaacacaagtttttctttgagtgtggaaaatgatttatcagttgacatg 182  Q
     ||  ||||  || |||||||||||||||||||| ||  |||||| || |||||||| ||||||||||  |||| ||||||||    
T  39422566 tttcccttcacat-tcctcaaatgatttttctacaaatgcaagttgttttttgagtgaggaaaatgatagatcaattgacatg 39422647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 39416349 - 39416530
Alignment:
Q  1 ttccaacatccctaatttcctttttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttctacttgtgt 100  Q
    |||||||||  ||||||||||||| |||||||||||| |||  |||||||||||||||||||||||||||||| ||||||||| ||| |||||||||  |    
T  39416349 ttccaacataactaatttccttttgcttattttcaagttctctgcagcactcctcaatatctctctttatggaatgcaatctcttcttttctacttgcat 39416448  T
Q  101 cttgcttctgatatcctcaaatgatttttctaccaacacaagtttttctttgagtgtggaaaatgatttatcagttgacatg 182  Q
     |  ||||||   |||||||||||||||||||  ||  |||||| || |||||||  ||||| |||||||||||||||||||    
T  39416449 gtcccttctgcgttcctcaaatgatttttctataaatgcaagttcttttttgagttcggaaattgatttatcagttgacatg 39416530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 39129578 - 39129487
Alignment:
Q  1 ttccaacatccctaatttcctttttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttct 92  Q
    ||||| |||| ||||||||||||||| |||||||||| |||| | |||||||||||||||||||||||||||||||||||||| ||||||||    
T  39129578 ttccagcatcactaatttcctttttcatattttcaagctctttggagcactcctcaatatctctctttatggactgcaatctcttctcttct 39129487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 182
Target Start/End: Original strand, 39488178 - 39488348
Alignment:
Q  12 ctaatttcctttttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttctacttgtgtcttgcttctga 111  Q
    |||||||||||||||||||||||||| ||||   |||||||||||| |||||||||||| ||||||| ||||| ||||||||||||  | || ||| ||     
T  39488178 ctaatttcctttttcttattttcaagctctttagagcactcctcaacatctctctttatagactgcagtctcccctcttctacttgccttttccttttgc 39488277  T
Q  112 tatcctcaaatgatttttctaccaacacaagtttttctttgagtgtggaaaatgatttatcagttgacatg 182  Q
      |||||||||||  ||||||||||  |||||| || ||| ||   |||||||||||| |||| |||||||    
T  39488278 attcctcaaatgaggtttctaccaatgcaagttcttttttcagcaaggaaaatgatttctcagatgacatg 39488348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 39602075 - 39601994
Alignment:
Q  12 ctaatttcctttttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttcta 93  Q
    |||||||||||||||||||||||||| |||| || |||||||| ||||||| |||||||||||||||||||  |||||||||    
T  39602075 ctaatttcctttttcttattttcaagctctttgcggcactcctgaatatctatctttatggactgcaatctattctcttcta 39601994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 39151981 - 39151897
Alignment:
Q  13 taatttcctttttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttctacttg 97  Q
    ||||||||||||||||||||||||| |||| | |||  |||||||||| ||||||||| ||||||| |||| |||||||||||||    
T  39151981 taatttcctttttcttattttcaagctctttggagcgttcctcaatatttctctttattgactgcagtctcttctcttctacttg 39151897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 44623687 - 44623617
Alignment:
Q  28 tattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttctacttgt 98  Q
    ||||||| || ||||||||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||    
T  44623687 tattttctagctcttcgcagcacttctcaatatctctctttatagaccgcaatcgcctctcttctacttgt 44623617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 39214997 - 39214925
Alignment:
Q  24 ttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttctactt 96  Q
    |||||||||||||| ||||  ||||||||||||| || |||||||||||||||||||||| |||| |||||||    
T  39214997 ttcttattttcaagctctttacagcactcctcaacatatctctttatggactgcaatctcttctcctctactt 39214925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 39450575 - 39450499
Alignment:
Q  20 ctttttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttctactt 96  Q
    |||||||||||||| ||| |||| |||||| |||||||||||| |||| ||||||||||||||| | ||||||||||    
T  39450575 ctttttcttattttgaagctctttgcagcagtcctcaatatctgtcttgatggactgcaatctcttttcttctactt 39450499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 39123603 - 39123536
Alignment:
Q  15 atttcctttttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatct 82  Q
    |||||||||||| ||||||||||||||| | ||||| ||||||||||||||| |||||| ||||||||    
T  39123603 atttcctttttcatattttcaagatctttggagcacccctcaatatctctctgtatggagtgcaatct 39123536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 27154981 - 27155095
Alignment:
Q  22 ttttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttctacttgtgtcttgcttctgatatcctcaaa 121  Q
    ||||| ||||| |||| |||| | |||||||||||||||||||||||||||||||||||||   ||||||| ||||| | ||  || |||  || |||||    
T  27154981 ttttcatatttccaagctctttggagcactcctcaatatctctctttatggactgcaatctttcctcttcttcttgtcttttctttttgaattcttcaaa 27155080  T
Q  122 tgatttttctaccaa 136  Q
    | |||||||||||||    
T  27155081 taatttttctaccaa 27155095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 39382213 - 39382282
Alignment:
Q  24 ttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttcta 93  Q
    |||||||||| ||| |||| ||||||||| ||| ||||||||||||||||||| |||||| |||||||||    
T  39382213 ttcttattttgaagctctttgcagcactcttcagtatctctctttatggactgtaatctcttctcttcta 39382282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 39495534 - 39495611
Alignment:
Q  15 atttcctttttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttct 92  Q
    |||||||||||  ||||| |||| |||| | ||| ||||||||||||||||||||||||||||||||||  |||||||    
T  39495534 atttccttttttatatttccaagctctttggagcgctcctcaatatctctctttatggactgcaatctctcctcttct 39495611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 39199482 - 39199554
Alignment:
Q  24 ttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttctactt 96  Q
    |||||||||| ||| |||| ||||||||| ||| |||||||||||||||||||||||||  ||||||| ||||    
T  39199482 ttcttattttgaagctctttgcagcactcttcagtatctctctttatggactgcaatcttttctcttcaactt 39199554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 39399013 - 39399085
Alignment:
Q  24 ttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttctactt 96  Q
    ||||| ||| |||| ||||  ||||| || |||||||||||||||||||||||||||||| ||||||||||||    
T  39399013 ttcttttttccaagttctttccagcagtcttcaatatctctctttatggactgcaatctcttctcttctactt 39399085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 231
Target Start/End: Complemental strand, 39136149 - 39136110
Alignment:
Q  192 tcatcatcatcatatgttgttggagacaccttggatttct 231  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  39136149 tcatcatcatcatatggtgttggagacaccttggatttct 39136110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 39220233 - 39220162
Alignment:
Q  25 tcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttctactt 96  Q
    ||||| ||| |||||||| ||||||||| ||| | ||||||||||||||||| ||||| |||||||| ||||    
T  39220233 tcttaatttgaagatctttgcagcactcttcagtttctctctttatggactgtaatcttctctcttcaactt 39220162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 39391666 - 39391725
Alignment:
Q  24 ttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctc 83  Q
    ||||||| |||||| |||| ||||||||| ||||||||| ||||||||||| ||||||||    
T  39391666 ttcttatcttcaagctctttgcagcactcttcaatatctttctttatggacagcaatctc 39391725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 39479182 - 39479224
Alignment:
Q  48 cactcctcaatatctctctttatggactgcaatctcctctctt 90  Q
    ||||| |||||||||||||||||||||||||||||| ||||||    
T  39479182 cactcttcaatatctctctttatggactgcaatctcttctctt 39479224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 44614543 - 44614473
Alignment:
Q  26 cttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttctactt 96  Q
    ||||||||| || |||| |||||| | |||||||||||||||||| ||| |||||  ||||||||||||||    
T  44614543 cttattttctagctctttgcagcatttctcaatatctctctttatagaccgcaattgcctctcttctactt 44614473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 39161162 - 39161102
Alignment:
Q  24 ttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcc 84  Q
    ||||||| |||||| |||| |||||| || ||||||||| |||  ||||||||||||||||    
T  39161162 ttcttatcttcaagctctttgcagcattcttcaatatctttctggatggactgcaatctcc 39161102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 39208032 - 39208092
Alignment:
Q  24 ttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcc 84  Q
    ||||||| |||||| |||| |||||| || ||||||||| |||  ||||||||||||||||    
T  39208032 ttcttatcttcaagctctttgcagcattcttcaatatctttctggatggactgcaatctcc 39208092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 3 - 231
Target Start/End: Complemental strand, 19806735 - 19806513
Alignment:
Q  3 ccaacatccctaatttcctttttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttctacttgtgtct 102  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19806735 ccaacataactaatttcctttttcttattttcaagatcttcgcagcaatcctcaatatctctctttatggactgcaatctcctctcttctacttgtgtct 19806636  T
Q  103 tgcttctgatatcctcaaatgatttttctaccaacacaagtttttctttgagtgtggaaaatgatttatcagttgacatgtcgtcgtcgtcatcatcatc 202  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||      | |   | |||||||    
T  19806635 tgcttctgatatcctcaaatgatttttctaccaacacaagttcttctttgagtgtggaaaatgatttatcagttgacat------ggcaggaacatcatc 19806542  T
Q  203 atatgttgttggagacaccttggatttct 231  Q
    ||||| |||||||||||||||||||||||    
T  19806541 atatggtgttggagacaccttggatttct 19806513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 44951384 - 44951455
Alignment:
Q  26 cttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctcctctcttctacttg 97  Q
    |||||||||||| ||||||||||||| || ||||||||||||||| | | |||||  |||||||||||||||    
T  44951384 cttattttcaagctcttcgcagcacttcttaatatctctctttatcggccgcaattgcctctcttctacttg 44951455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 33559695 - 33559636
Alignment:
Q  24 ttcttattttcaagatcttcgcagcactcctcaatatctctctttatggactgcaatctc 83  Q
    ||||||| |||||| |||| ||||||||| ||||||||| ||||||  ||||||||||||    
T  33559695 ttcttatcttcaagctctttgcagcactcttcaatatctttctttacagactgcaatctc 33559636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 16112466 - 16112428
Alignment:
Q  54 tcaatatctctctttatggactgcaatctcctctcttct 92  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  16112466 tcaatatctctctttatggactgcaatttcttctcttct 16112428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University