View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14242_high_11 (Length: 285)
Name: NF14242_high_11
Description: NF14242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14242_high_11 |
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Alignment Details
Target: chr4 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 66 - 245
Target Start/End: Original strand, 44573285 - 44573460
Alignment:
| Q |
66 |
atatgtatttatcccaattgaaattcaaacattaattcatcatattggagagtccgacttcttccattaaacttaaatccaattggttcaataatcaaat |
165 |
Q |
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| T |
44573285 |
atatgtatttatcccaattgaaattcaaacattaat----catattggagagtccgacttcttccattaaacttaaatccaattggttcaataatcaaat |
44573380 |
T |
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| Q |
166 |
ttcaagttgccaagattcactactttactcctttcattattgggccggaaatatcatgttaatagaaattgaaaatattt |
245 |
Q |
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| T |
44573381 |
ttcaagttgccaagtttcactactttactcctttcattattgggccggaaatatcatgttaatagaaattgaaaatattt |
44573460 |
T |
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