View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14242_high_4 (Length: 509)
Name: NF14242_high_4
Description: NF14242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14242_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 407; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 17 - 496
Target Start/End: Complemental strand, 40255328 - 40254855
Alignment:
| Q |
17 |
catttgattccatatacgacattggttcattcttcaccaataaaccagaaccagaaccagaaccatgacgcatatgagaaggtccattagaactcgaagg |
116 |
Q |
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| T |
40255328 |
catttgattccatatacgacattggttcattcttcactaataaaccagaaccagaacta------tgacgcatatgagaaggtccattagaactcgaagg |
40255235 |
T |
|
| Q |
117 |
aaatgctaaactcaaagaagttggaacaacactttccttatcataaatattgttagataaataattctccttgttgatgctatgaagtgaaaggctagag |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40255234 |
aaatgctaaactcaaagaagttggaacaacactttccttatcataaatattgttagataaataattctccttgttgatgctatgaagtgaaaggctagag |
40255135 |
T |
|
| Q |
217 |
gaagcaacatcatcaatatttgcatttactattccaaatttgttttgatgaannnnnnnnnnnnnnaaggccatgttgcatgattcaactattcttgtgt |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
40255134 |
gaagcaacatcatcaatatttgcatttactattccaaatttgttttgatgaattttttgcttttttaaggccatgttgcatgattcaactattcttgtgt |
40255035 |
T |
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| Q |
317 |
tagatgaattcattgaggaaattttcttctcattatttgattggaggctagacaaagataaatcacatgaaagttgttgctttggatgatcaagttgtgg |
416 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40255034 |
tagatgaattcattgaggaaattttcttctcattatttgattggaggctagacaaagataaatcacatgaaagttgttgctttggatgatcaagttgtgg |
40254935 |
T |
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| Q |
417 |
aatagtactatatgtcttagcttgtgtagatggctgaaaatttcttattaacaattgaagttgatctcttgcttcatctc |
496 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40254934 |
aatagtactatatgtcttagcttgtgtagatggctgaaaatttcttattaacaattgaagttgatctcttgcttcatctc |
40254855 |
T |
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