View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14243_low_13 (Length: 333)
Name: NF14243_low_13
Description: NF14243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14243_low_13 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 8 - 333
Target Start/End: Complemental strand, 10165000 - 10164675
Alignment:
| Q |
8 |
tgcaattcaataaatgatgttatcgtcttcaactttagtcaaagagataagtagagtttctttggattcattcattctgcataaaaatatttttccgatg |
107 |
Q |
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| T |
10165000 |
tgcaattcaataaatgatgttatcgtcttcaactttattcaaaaagataagtagagtttcattggattcattcattctgcataaaaatatttttccgatg |
10164901 |
T |
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| Q |
108 |
ctaaataagaaaattgattcaattgacagattcatggtgcttcaacatttaaaaaatcgtaaaatttaatatttaacttgcataaaacacatcactccat |
207 |
Q |
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| T |
10164900 |
ctaaataagaaaattgattcaattgacagattcatggtgcttcaacatttaaaaaatcgtaaaatttaatatttaacttgcataaaacacatcactccat |
10164801 |
T |
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| Q |
208 |
gcttgatagattttccaaaatttgaattagctagatatatatttgcttgcagtgaacacaatgcctatgtaggggacacttacaagcccaagtgagagca |
307 |
Q |
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| T |
10164800 |
gcttgatagattttccaaaatttgaattagctagatatatatttgcttgcagtgaacacaatgcctatgtaggggacacttacaagcccaagtgagagca |
10164701 |
T |
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| Q |
308 |
caaaaggatataatttaaaagcttgc |
333 |
Q |
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| T |
10164700 |
caaaaggatataatttaaaagcttgc |
10164675 |
T |
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