View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14243_low_15 (Length: 305)

Name: NF14243_low_15
Description: NF14243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14243_low_15
NF14243_low_15
[»] chr7 (31 HSPs)
chr7 (21-295)||(7877525-7877799)
chr7 (17-295)||(8590736-8591014)
chr7 (78-295)||(8602133-8602350)
chr7 (17-295)||(29581633-29581911)
chr7 (18-294)||(8382669-8382945)
chr7 (17-295)||(29577461-29577742)
chr7 (18-295)||(8570410-8570687)
chr7 (78-295)||(8576485-8576702)
chr7 (78-295)||(8581859-8582076)
chr7 (81-292)||(8538198-8538409)
chr7 (21-295)||(8545735-8546008)
chr7 (78-280)||(8610076-8610278)
chr7 (17-295)||(8646975-8647253)
chr7 (78-274)||(8559492-8559688)
chr7 (65-292)||(6789658-6789885)
chr7 (24-292)||(8585501-8585769)
chr7 (148-295)||(8636135-8636282)
chr7 (24-292)||(8628637-8628905)
chr7 (158-295)||(8667658-8667795)
chr7 (17-296)||(8659461-8659740)
chr7 (158-295)||(10494166-10494303)
chr7 (158-295)||(13333248-13333385)
chr7 (180-295)||(3147533-3147648)
chr7 (186-292)||(1301731-1301837)
chr7 (21-286)||(8654552-8654817)
chr7 (158-295)||(27830667-27830804)
chr7 (81-282)||(17268101-17268302)
chr7 (158-295)||(8671422-8671559)
chr7 (158-282)||(17260480-17260604)
chr7 (213-295)||(8640339-8640421)
chr7 (162-295)||(39985889-39986022)
[»] chr2 (9 HSPs)
chr2 (83-293)||(7542390-7542600)
chr2 (67-295)||(12234837-12235065)
chr2 (24-292)||(16661787-16662055)
chr2 (74-295)||(11999549-11999770)
chr2 (74-295)||(14703563-14703784)
chr2 (75-295)||(12258373-12258593)
chr2 (83-295)||(43625576-43625788)
chr2 (90-295)||(12245198-12245403)
chr2 (24-295)||(16657309-16657580)
[»] chr4 (6 HSPs)
chr4 (87-295)||(35132616-35132824)
chr4 (158-295)||(9335683-9335820)
chr4 (162-292)||(30775495-30775625)
chr4 (225-296)||(54396729-54396800)
chr4 (186-295)||(23587525-23587634)
chr4 (78-117)||(30775411-30775450)
[»] chr8 (2 HSPs)
chr8 (17-295)||(12528602-12528880)
chr8 (81-295)||(43745011-43745223)
[»] chr1 (4 HSPs)
chr1 (186-292)||(15595308-15595414)
chr1 (81-295)||(34466585-34466799)
chr1 (207-296)||(4678349-4678438)
chr1 (74-117)||(15595189-15595232)
[»] chr5 (1 HSPs)
chr5 (81-295)||(28220113-28220327)
[»] chr6 (3 HSPs)
chr6 (162-280)||(11156513-11156631)
chr6 (158-236)||(11170809-11170887)
chr6 (189-295)||(28910852-28910958)


Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 21 - 295
Target Start/End: Complemental strand, 7877799 - 7877525
Alignment:
Q  21 cctaggtgagtatctccggcagtggcttttacatcaaagctctcatctttgagtgttagaagagacacatcaaaagtgccaccgccaagatcaaagatga 120  Q
    ||||||||||||||||||||||| ||| ||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| |||||||||| |||||    
T  7877799 cctaggtgagtatctccggcagtagctattacatcaaagctatcatcttttagtgtgagaagagacacatcgaaagtgccaccaccaagatcaatgatga 7877700  T
Q  121 aaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggccagc 220  Q
    | ||||||||||||||||  ||||||  ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||    
T  7877699 acacatttcgttttccgatgttatttattctcttttgaaggccatatgcaagggcagcagcagttggttcattaattatccgcataacattgaggccggc 7877600  T
Q  221 aatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaactgcattctt 295  Q
    ||  |||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  7877599 aactgcaccagcatcttttgtggcttttcgttgagaatcattgaaataagccggcacagtaacaactgcattctt 7877525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 17 - 295
Target Start/End: Original strand, 8590736 - 8591014
Alignment:
Q  17 tcctcctaggtgagtatctccggcagtggcttttacatcaaagctctcatctttgagtgttagaagagacacatcaaaagtgccaccgccaagatcaaag 116  Q
    |||||||||||| |||||||||| ||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  8590736 tcctcctaggtgggtatctccggaagtggcttttacatcaaagctatcacctttgagtgtgagaagagacacatcaaaagtgccaccaccaagatcaaag 8590835  T
Q  117 atgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggc 216  Q
    ||||| ||||||||||||||||  ||| || |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| | ||    
T  8590836 atgaacacatttcgttttccgatgttactttctctcttttgaaggccatatgcaaggccagcggcagttggttcattaattatccgcattacattcaagc 8590935  T
Q  217 cagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaactgcattctt 295  Q
    |||||||| ||||||||||||| || ||||| |  ||||| |||||||||||||| |||||||||||||||||||||||    
T  8590936 cagcaatgacaccagcatctttggtagctttcctctgagaatcattaaaataagctggcacagtaacaactgcattctt 8591014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 78 - 295
Target Start/End: Original strand, 8602133 - 8602350
Alignment:
Q  78 agaagagacacatcaaaagtgccaccgccaagatcaaagatgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcag 177  Q
    |||||||| ||||||||||| ||||| ||||||||||| ||||||| |||||  | | | |||  ||| ||||| |||||||||||||||||||| ||||    
T  8602133 agaagagaaacatcaaaagttccaccaccaagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaagagcag 8602232  T
Q  178 ccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcac 277  Q
    | |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||    
T  8602233 ctgcagttggctcattgattatccgcattacattgagaccagcaatggcaccagcatcttttgtggcttttcgctgagaatcattaaaataagccggcac 8602332  T
Q  278 agtaacaactgcattctt 295  Q
    ||||||||||||||||||    
T  8602333 agtaacaactgcattctt 8602350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 17 - 295
Target Start/End: Complemental strand, 29581911 - 29581633
Alignment:
Q  17 tcctcctaggtgagtatctccggcagtggcttttacatcaaagctctcatctttgagtgttagaagagacacatcaaaagtgccaccgccaagatcaaag 116  Q
    |||||||||||||||||| || |||||||| || || |||||  | ||||| |||||||| |||||||||||||||||||||||||| ||||||||||||    
T  29581911 tcctcctaggtgagtatcgccagcagtggccttcacttcaaacttatcatccttgagtgtgagaagagacacatcaaaagtgccaccaccaagatcaaag 29581812  T
Q  117 atgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggc 216  Q
    ||||| | |||||||||||| |||  |||  |||  |||||||  ||||||||||| ||||| ||||||||||| || ||||||| ||||||||||||||    
T  29581811 atgaatatatttcgttttccaacaaaattacctcccttttgaataccatatgcaagtgcagcagcagttggttcgttgattatcctcattacattgaggc 29581712  T
Q  217 cagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaactgcattctt 295  Q
    |||| ||    ||||||||||| ||||||||||| ||||| ||||| |||||||||||||| ||||  |||||||||||    
T  29581711 cagctataatgccagcatctttggtggcttttcgctgagaatcattgaaataagcaggcacggtaatcactgcattctt 29581633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 294
Target Start/End: Complemental strand, 8382945 - 8382669
Alignment:
Q  18 cctcctaggtgagtatctccggcagtggcttttacatcaaagctctcatctttgagtgttagaagagacacatcaaaagtgccaccgccaagatcaaaga 117  Q
    |||||||| ||||| |||||||||||||| || ||| |||||   | ||  || | ||| || ||||||||||||||||| ||||| |||||||||||||    
T  8382945 cctcctagatgagtgtctccggcagtggccttcacaacaaagacattattcttaattgtgaggagagacacatcaaaagttccaccaccaagatcaaaga 8382846  T
Q  118 tgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggcc 217  Q
    |||||| |||||  | | | | |  ||| ||||| || ||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||||||||||    
T  8382845 tgaaaatatttctctcttcaagacaattagctctcttctgaaggccatatgcaagagcagcggcagttggctcattgattatccgcattacattgaggcc 8382746  T
Q  218 agcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaactgcattct 294  Q
    |||||| ||||||||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||| ||||||    
T  8382745 agcaatcgcaccagcatcttttgtggctttccgttgagaatcattgaaatatgcaggcacggtaacaactacattct 8382669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 17 - 295
Target Start/End: Complemental strand, 29577742 - 29577461
Alignment:
Q  17 tcctcctaggtgagtatctccggcagtggcttttacatcaaagctctcatctttgagtgttagaagagacacatcaaaagtgccaccgccaagatcaaag 116  Q
    |||||||||||||||||| || |||||||| ||||| ||||| || ||||| || ||||| ||||||||||||||||| |||||||| ||||||||||||    
T  29577742 tcctcctaggtgagtatcaccagcagtggcctttacttcaaaactatcatccttaagtgtgagaagagacacatcaaaggtgccaccaccaagatcaaag 29577643  T
Q  117 atgaaaacatttcgttttccgacatta---tttgctcttttttgaaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattga 213  Q
    ||||| |||||||| ||||| |||  |   ||  |||| |||||||  ||||||||||| ||||| |||||||||||||| |||||||||||||||||||    
T  29577642 atgaatacatttcgctttccaacaacaaaattacctctcttttgaattccatatgcaagtgcagcagcagttggttcattgattatccgcattacattga 29577543  T
Q  214 ggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaactgcattctt 295  Q
    ||||||||||    || |||||||| ||||||||||| ||||| ||||| |||||||| ||||| || |  |||||||||||    
T  29577542 ggccagcaataatgccggcatctttggtggcttttcgctgagaatcattgaaataagctggcactgtgatcactgcattctt 29577461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 18 - 295
Target Start/End: Original strand, 8570410 - 8570687
Alignment:
Q  18 cctcctaggtgagtatctccggcagtggcttttacatcaaagctctcatctttgagtgttagaagagacacatcaaaagtgccaccgccaagatcaaaga 117  Q
    ||||| |||||||| ||||| |||||||| || || ||| || | | ||| || | ||| |||| ||||||||||||||| ||||||||||| |||||||    
T  8570410 cctcccaggtgagtgtctccagcagtggccttgacttcatagttgttatccttaactgtgagaatagacacatcaaaagttccaccgccaaggtcaaaga 8570509  T
Q  118 tgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggcc 217  Q
    | |||| |||||  ||  | |||  ||| ||||| |||||||||||||||||||| || |||||||| |||||||| |||||||||||||||||||| ||    
T  8570510 taaaaatatttctcttatcaacaaaattagctctcttttgaaggccatatgcaagagctgccgcagtcggttcattgattatccgcattacattgagacc 8570609  T
Q  218 agcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaactgcattctt 295  Q
    ||||||  |||| |||||||| |||||| ||||||| || ||||||||||||||||| |||||||  |||||||||||    
T  8570610 agcaatttcacctgcatctttagtggctcttcgttgtgaatcattaaaataagcaggtacagtaatcactgcattctt 8570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 78 - 295
Target Start/End: Original strand, 8576485 - 8576702
Alignment:
Q  78 agaagagacacatcaaaagtgccaccgccaagatcaaagatgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcag 177  Q
    |||| ||||||||||||||| ||||||||||| |||||||| |||| ||||| |||  | |||  ||| ||||| |||||||||||||| ||||| || |    
T  8576485 agaatagacacatcaaaagttccaccgccaaggtcaaagataaaaatatttcttttatcaacacaattagctctcttttgaaggccatacgcaagagctg 8576584  T
Q  178 ccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcac 277  Q
    ||||||| |||||||| |||||| |||| |||||||| |||||||| ||||| |||||||| |||||| ||||||| || ||||||||||||||||||||    
T  8576585 ccgcagtcggttcattgattatctgcatgacattgagaccagcaattgcacctgcatctttagtggctcttcgttgggaatcattaaaataagcaggcac 8576684  T
Q  278 agtaacaactgcattctt 295  Q
    || ||  |||||||||||    
T  8576685 agaaatcactgcattctt 8576702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 78 - 295
Target Start/End: Original strand, 8581859 - 8582076
Alignment:
Q  78 agaagagacacatcaaaagtgccaccgccaagatcaaagatgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcag 177  Q
    |||| ||||||||||||||| ||||| ||||| |||||||| |||| |||||  ||  | |||  ||| ||||| |||||||||||||||||||| || |    
T  8581859 agaatagacacatcaaaagttccacctccaaggtcaaagataaaaatatttctcttatcaacacaattagctctcttttgaaggccatatgcaagagctg 8581958  T
Q  178 ccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcac 277  Q
    ||||||| |||||||| |||||||||||||||||||| || |||||  |||| |||||||| |||||| ||||||| || ||||||||||||||||| ||    
T  8581959 ccgcagtcggttcattgattatccgcattacattgagacctgcaatttcacctgcatctttagtggctcttcgttgtgaatcattaaaataagcaggtac 8582058  T
Q  278 agtaacaactgcattctt 295  Q
    |||||  |||||||||||    
T  8582059 agtaatcactgcattctt 8582076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 81 - 292
Target Start/End: Original strand, 8538198 - 8538409
Alignment:
Q  81 agagacacatcaaaagtgccaccgccaagatcaaagatgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccg 180  Q
    ||||| ||||||||||| ||||| |||||||||||||||||||| ||||  | | | |||  ||| ||||| ||||||||||| |||||||| ||||| |    
T  8538198 agagatacatcaaaagttccaccaccaagatcaaagatgaaaacttttctctcttcaacacaattagctctcttttgaaggccgtatgcaagagcagcag 8538297  T
Q  181 cagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagt 280  Q
    | || |||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||| |||| || || ||||| ||||||||||| || ||    
T  8538298 ctgtaggttcattgattatccgcattacattgaggccagcaatgacaccagcatctttggtggctcttcgctgtgaatcattgaaataagcaggtactgt 8538397  T
Q  281 aacaactgcatt 292  Q
    ||  ||||||||    
T  8538398 aatcactgcatt 8538409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 21 - 295
Target Start/End: Original strand, 8545735 - 8546008
Alignment:
Q  21 cctaggtgagtatctccggcagtggcttttacatcaaagctctcatctttgagtgttagaagagacacatcaaaagtgccaccgccaagatcaaagatga 120  Q
    ||||||| ||| ||||| |||||||| || |||||||||  || || ||| | ||| |||| ||||||||||||||| ||||||||||| |||||||| |    
T  8545735 cctaggtaagtgtctccagcagtggccttgacatcaaagaccttatttttaattgtaagaatagacacatcaaaagttccaccgccaaggtcaaagataa 8545834  T
Q  121 aaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggccagc 220  Q
    ||| |||||  ||  | ||   ||| ||||| |||||||||||||||||||| || |||||||| |||||||| ||||||||||| ||||| || || ||    
T  8545835 aaatatttctcttatcaacca-attagctctcttttgaaggccatatgcaagagccgccgcagtcggttcattgattatccgcatgacatttagaccggc 8545933  T
Q  221 aatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaactgcattctt 295  Q
    |||  |||| ||||||||||||| | || |||| || ||||||||||||||||| |||||||  |||||||||||    
T  8545934 aatttcacctgcatcttttgtggatctttgttgtgaatcattaaaataagcaggtacagtaatcactgcattctt 8546008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 78 - 280
Target Start/End: Original strand, 8610076 - 8610278
Alignment:
Q  78 agaagagacacatcaaaagtgccaccgccaagatcaaagatgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcag 177  Q
    |||| ||||||||| ||||| ||||| |||||||||||||| |||| |||||  ||| | |||  ||| ||||| || ||||| ||||||||||| || |    
T  8610076 agaacagacacatcgaaagtcccaccaccaagatcaaagataaaaatatttctattttccacacaattagctctcttctgaagaccatatgcaagagccg 8610175  T
Q  178 ccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcac 277  Q
    | || ||||||||||| || ||||| |||||||| ||||||| |||| |||||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  8610176 cagccgttggttcattgataatccggattacattaaggccagaaatgacaccagcatcttttgtggctttccgctgagaatcattaaaataagcaggcac 8610275  T
Q  278 agt 280  Q
    |||    
T  8610276 agt 8610278  T

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Target: chr7; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 17 - 295
Target Start/End: Original strand, 8646975 - 8647253
Alignment:
Q  17 tcctcctaggtgagtatctccggcagtggcttttacatcaaagctctcatctttgagtgttagaagagacacatcaaaagtgccaccgccaagatcaaag 116  Q
    |||||| |||||||| | ||| || |||||||| |||| ||||  || ||| || | ||| || ||||||||||||||||| ||||| ||||| || |||    
T  8646975 tcctccgaggtgagtgtttccagcggtggctttaacatgaaagaccttatccttaattgtaaggagagacacatcaaaagttccaccaccaaggtcgaag 8647074  T
Q  117 atgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggc 216  Q
    ||||| | |||||||| | |  ||  ||||| ||| || | |||||||||||| || ||||| || ||||||||||| |||||||| || | ||| ||||    
T  8647075 atgaatatatttcgttcttcagcacaatttgttctcttgtcaaggccatatgcgagagcagcagctgttggttcattgattatccggatgatattaaggc 8647174  T
Q  217 cagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaactgcattctt 295  Q
    |||||||||| || |||||| | ||||||||||| ||| | ||||| || || ||||||||||||||||||||||||||    
T  8647175 cagcaatggccccggcatctatagtggcttttcgctgataatcattgaagtatgcaggcacagtaacaactgcattctt 8647253  T

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Target: chr7; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 78 - 274
Target Start/End: Original strand, 8559492 - 8559688
Alignment:
Q  78 agaagagacacatcaaaagtgccaccgccaagatcaaagatgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcag 177  Q
    |||||||| ||||||||||| ||||| || |||||||||||||||| |||||  | |   |||  ||| | ||| |||||||| ||||||||||| ||||    
T  8559492 agaagagaaacatcaaaagttccaccaccgagatcaaagatgaaaatatttctctctttaacacaattagatctcttttgaagtccatatgcaagagcag 8559591  T
Q  178 ccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcagg 274  Q
    | |||||||||||||| |||||| |||||||||| || ||||||||  |||| |||||||| |||||| ||| |||||| |||||||||||||||||    
T  8559592 ctgcagttggttcattgattatctgcattacattaagaccagcaatttcacctgcatctttggtggctcttctttgagaatcattaaaataagcagg 8559688  T

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Target: chr7; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 65 - 292
Target Start/End: Original strand, 6789658 - 6789885
Alignment:
Q  65 atctttgagtgttagaagagacacatcaaaagtgccaccgccaagatcaaagatgaaaacatttcgttttccgacattatttgctcttttttgaaggcca 164  Q
    |||||||| |||||  | ||||||||| ||||||||||| ||||| || |||| ||||| ||||  || |||  | | ||| | ||| || | |||||||    
T  6789658 atctttgattgttaagatagacacatcgaaagtgccaccaccaaggtcgaagacgaaaatatttttttctccaccgtaattagttctcttatcaaggcca 6789757  T
Q  165 tatgcaagggcagccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaa 264  Q
    |||||||| ||||| || ||||||||||| ||||| || || ||||| || |||||||||||||||||||||   |||||||| |||||||| ||||| |    
T  6789758 tatgcaagagcagcagctgttggttcattgattattcgtataacattaagaccagcaatggcaccagcatctaaagtggctttccgttgagaatcattga 6789857  T
Q  265 aataagcaggcacagtaacaactgcatt 292  Q
    |||||||||||||||||| |||||||||    
T  6789858 aataagcaggcacagtaataactgcatt 6789885  T

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Target: chr7; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 292
Target Start/End: Complemental strand, 8585769 - 8585501
Alignment:
Q  24 aggtgagtatctccggcagtggcttttacatcaaagctctcatctttgagtgttagaagagacacatcaaaagtgccaccgccaagatcaaagatgaaaa 123  Q
    |||||||||| ||| || || ||||| || ||||||   ||| |||| | ||| || ||||||||||||||||| ||||| ||||||||||| |  ||||    
T  8585769 aggtgagtatttccagcggttgctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaacacaaaaa 8585670  T
Q  124 catttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggccagcaat 223  Q
     ||||||||  ||  ||   ||  || | || | ||||||||||||||  || || ||||| |||||||| ||||||| ||| ||||| |||||||||||    
T  8585669 tatttcgttcaccatcacagttacctttgttgtcaaggccatatgcaatagctgcagcagtgggttcattgattatcctcataacattaaggccagcaat 8585570  T
Q  224 ggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaactgcatt 292  Q
    ||||||||||||  | ||||||||||| ||||| ||||| ||||||||||||||||| |||||||||||    
T  8585569 ggcaccagcatccatggtggcttttcgctgagaatcattgaaataagcaggcacagtcacaactgcatt 8585501  T

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Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 148 - 295
Target Start/End: Complemental strand, 8636282 - 8636135
Alignment:
Q  148 ctcttttttgaaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttt 247  Q
    |||| |||||||| ||||| ||||  || || |||||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||| |||| |||    
T  8636282 ctctcttttgaagtccatacgcaaaagctgcagcagttggttcattgattatccgaattacattaaggccggcaatggcaccagcatctttggtggattt 8636183  T
Q  248 tcgttgagagtcattaaaataagcaggcacagtaacaactgcattctt 295  Q
     || ||||| ||||| |||||||| ||||||||||  |||||||||||    
T  8636182 acgctgagaatcattgaaataagcgggcacagtaatgactgcattctt 8636135  T

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Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 292
Target Start/End: Original strand, 8628637 - 8628905
Alignment:
Q  24 aggtgagtatctccggcagtggcttttacatcaaagctctcatctttgagtgttagaagagacacatcaaaagtgccaccgccaagatcaaagatgaaaa 123  Q
    |||||||||| ||| ||||||||||| || ||||||   ||| |||| | ||| || ||||||||||||||||| ||||| ||||||||||| |  ||||    
T  8628637 aggtgagtatttccagcagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaacacaaaaa 8628736  T
Q  124 catttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggccagcaat 223  Q
     ||||||||  ||  ||    |  || | || | ||||||||||||||  || || ||||| || ||||| ||||||| ||| ||||| |||||||||||    
T  8628737 tatttcgttcaccatcacacctacctttgttgtcaaggccatatgcaatagctgcagcagtggggtcattgattatcctcataacattaaggccagcaat 8628836  T
Q  224 ggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaactgcatt 292  Q
    |||||||||||   | ||||||||||| ||||| ||||| |||||||||||||| || |||||||||||    
T  8628837 ggcaccagcattcatggtggcttttcgctgagaatcattgaaataagcaggcacggtgacaactgcatt 8628905  T

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Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 295
Target Start/End: Original strand, 8667658 - 8667795
Alignment:
Q  158 aaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagag 257  Q
    ||||||||||||||  || |||||||| |||||||| |||||||| || ||||| || |||||||| | |||||||||| | ||||| ||||| |||||     
T  8667658 aaggccatatgcaatagctgccgcagtaggttcattgattatccgaatgacattaagtccagcaatagtaccagcatctatggtggcctttcgctgagaa 8667757  T
Q  258 tcattaaaataagcaggcacagtaacaactgcattctt 295  Q
    ||||| || ||||| |||||||||||||| ||||||||    
T  8667758 tcattgaagtaagctggcacagtaacaacggcattctt 8667795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 296
Target Start/End: Original strand, 8659461 - 8659740
Alignment:
Q  17 tcctcctaggtgagtatctccggcagtggcttttacatcaaagctctcatctttgagtgttagaagagacacatcaaaagtgccaccgccaagatcaaag 116  Q
    |||||| |||||||| | ||| | |||||||||||| ||||||   ||| | || | ||| || | ||||||||||||||| ||||| ||||||||||||    
T  8659461 tcctccaaggtgagtgtttccagaagtggcttttacttcaaagacatcacccttcattgtaaggatagacacatcaaaagtaccaccaccaagatcaaag 8659560  T
Q  117 atgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggc 216  Q
    |  |||| |||| |||| ||  ||   |   |||| || | ||  ||||||||||  || || ||||| ||||||||||||||| | || ||||| ||||    
T  8659561 accaaaatattttgtttaccatcacagtcacctctcttgtcaaaaccatatgcaatagctgcagcagtaggttcattaattatctgaatgacattaaggc 8659660  T
Q  217 cagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaactgcattcttc 296  Q
    ||||||||||||| | |||| | ||||||||||| ||||| ||||| || || |||||||| |||||||| |||||||||    
T  8659661 cagcaatggcaccggaatctatggtggcttttcgctgagaatcattgaactatgcaggcactgtaacaacagcattcttc 8659740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 158 - 295
Target Start/End: Complemental strand, 10494303 - 10494166
Alignment:
Q  158 aaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagag 257  Q
    ||||||||||||||  || || ||||| |||||||| |||||||| || ||||| ||||||||||| |||||||||||  | || || |||||||||||     
T  10494303 aaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaaggccagcaatagcaccagcatcaatagtagcctttcgttgagaa 10494204  T
Q  258 tcattaaaataagcaggcacagtaacaactgcattctt 295  Q
    || || || ||||| |||||||||||||| ||||||||    
T  10494203 tcgttgaagtaagccggcacagtaacaacagcattctt 10494166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 158 - 295
Target Start/End: Complemental strand, 13333385 - 13333248
Alignment:
Q  158 aaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagag 257  Q
    ||||||||||||||  || || ||||| |||||||| ||||| || || | ||| ||||||||||| |||||||||||| | ||||| ||||| |||||     
T  13333385 aaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgatattaaggccagcaatagcaccagcatctatggtggcctttcgctgagaa 13333286  T
Q  258 tcattaaaataagcaggcacagtaacaactgcattctt 295  Q
    ||||| || ||||| |||||||||||||| ||||||||    
T  13333285 tcattgaagtaagccggcacagtaacaacggcattctt 13333248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 180 - 295
Target Start/End: Original strand, 3147533 - 3147648
Alignment:
Q  180 gcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacag 279  Q
    ||||| |||||||| ||||||||||| | ||| |||||||||||  ||||||||||| |||| ||||| || ||||  ||||| ||||||||||| || |    
T  3147533 gcagtaggttcattgattatccgcataatattaaggccagcaataacaccagcatctattgtcgctttccgctgagcatcattgaaataagcaggtacgg 3147632  T
Q  280 taacaactgcattctt 295  Q
    ||||||||||||||||    
T  3147633 taacaactgcattctt 3147648  T

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Target: chr7; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 186 - 292
Target Start/End: Original strand, 1301731 - 1301837
Alignment:
Q  186 ggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaa 285  Q
    ||||||||||||||| | || ||||| ||||||||||| ||||| |||||| | ||||||||||| ||||| ||||| ||||  ||||||||||||||||    
T  1301731 ggttcattaattatctgaatgacattaaggccagcaattgcaccggcatctatggtggcttttcgctgagaatcattgaaatgtgcaggcacagtaacaa 1301830  T
Q  286 ctgcatt 292  Q
    | |||||    
T  1301831 cagcatt 1301837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 286
Target Start/End: Original strand, 8654552 - 8654817
Alignment:
Q  21 cctaggtgagtatctccggcagtggcttttacatcaaagctctcatctttgagtgttagaagagacacatcaaaagtgccaccgccaagatcaaagatga 120  Q
    |||||||| || | ||| |||||||||||||| ||||||   ||| | || | ||| || | ||||||||||||||| ||||| ||||||||||| |  |    
T  8654552 cctaggtgcgtgtttccagcagtggcttttacgtcaaagacatcacccttaattgtgagtatagacacatcaaaagtaccaccaccaagatcaaatacca 8654651  T
Q  121 aaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggccagc 220  Q
    ||| ||| ||||| ||  |||  ||   ||  || | ||||||||||||||  || || ||||| |||||||| | |||||| || || || || |||||    
T  8654652 aaatattccgtttaccatcatagttacttcgcttgtcaaggccatatgcaatagctgcggcagtaggttcattgagtatccgaatgacgttaagtccagc 8654751  T
Q  221 aatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaac 286  Q
    |||||||||||||||| | || |||||||| ||||||||||| || || || ||||||||||||||    
T  8654752 aatggcaccagcatctatggttgcttttcgctgagagtcattgaagtatgccggcacagtaacaac 8654817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 295
Target Start/End: Complemental strand, 27830804 - 27830667
Alignment:
Q  158 aaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagag 257  Q
    ||||||||||||||  || || ||||| || ||  | ||||||||||| ||||| ||||||||||||||||| | ||||   ||||||||||||||||||    
T  27830804 aaggccatatgcaatagctgcagcagtaggctcgcttattatccgcataacattaaggccagcaatggcaccggaatctacagtggcttttcgttgagag 27830705  T
Q  258 tcattaaaataagcaggcacagtaacaactgcattctt 295  Q
    ||||| |||||||| ||||| || |  |||||||||||    
T  27830704 tcattgaaataagctggcacggttattactgcattctt 27830667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 282
Target Start/End: Original strand, 17268101 - 17268302
Alignment:
Q  81 agagacacatcaaaagtgccaccgccaagatcaaagatgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccg 180  Q
    ||||||||||||||||| ||||| ||||| |||||||  |||| ||| |||| | | |||   || | ||| ||   ||||||||||||||  || || |    
T  17268101 agagacacatcaaaagtcccaccaccaaggtcaaagacaaaaatattccgttcttcaacacagttagttctcttgccaaggccatatgcaatagctgcag 17268200  T
Q  181 cagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagt 280  Q
    ||||||||||||| |||| |  || |||||| |||||||||||| ||||||||||| | ||||||||||| ||||| || || || ||||| || |||||    
T  17268201 cagttggttcattgattaccttcaatacattaaggccagcaatgacaccagcatctatggtggcttttcgctgagaatcgttgaagtaagccgggacagt 17268300  T
Q  281 aa 282  Q
    ||    
T  17268301 aa 17268302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 295
Target Start/End: Complemental strand, 8671559 - 8671422
Alignment:
Q  158 aaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagag 257  Q
    ||||||||||||||  || || ||||| |||||||| |||||||| || ||||| || |||||||| | |||||||||  | |||||  |||| |||||     
T  8671559 aaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaagtccagcaatagtaccagcatcaatggtggccgttcgctgagaa 8671460  T
Q  258 tcattaaaataagcaggcacagtaacaactgcattctt 295  Q
    ||||| || ||||| ||||| |||||||| ||||||||    
T  8671459 tcattgaagtaagctggcacggtaacaacggcattctt 8671422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 17260480 - 17260604
Alignment:
Q  158 aaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagag 257  Q
    ||||||||||||||  || || ||| | ||||||||||||| |  ||  ||||  |||||||||||  ||||||||||| | ||||||||||| |||||     
T  17260480 aaggccatatgcaatagctgcagcaataggttcattaattaacttcaaaacataaaggccagcaataacaccagcatctatggtggcttttcgctgagaa 17260579  T
Q  258 tcattaaaataagcaggcacagtaa 282  Q
    ||||| ||||||||||| |||||||    
T  17260580 tcattgaaataagcaggaacagtaa 17260604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 295
Target Start/End: Complemental strand, 8640421 - 8640339
Alignment:
Q  213 aggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaactgcattctt 295  Q
    |||||||||||||| || |||||| | ||||||||| | ||| | ||||| || |||||||||| ||||||||||||||||||    
T  8640421 aggccagcaatggccccggcatctatggtggctttttgctgataatcattgaagtaagcaggcatagtaacaactgcattctt 8640339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 295
Target Start/End: Original strand, 39985889 - 39986022
Alignment:
Q  162 ccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcat 261  Q
    ||||| |||| |||||| ||||| || ||||| || || ||||| ||||| || || |||||  | |||||||| || || ||||  || || |||||||    
T  39985889 ccataagcaatggcagcagcagtgggctcattgataattcgcatgacattaagaccggcaataactccagcatccttggtagcttgacgctgggagtcat 39985988  T
Q  262 taaaataagcaggcacagtaacaactgcattctt 295  Q
    |||| |||||||| ||||||||||| ||||||||    
T  39985989 taaagtaagcagggacagtaacaacagcattctt 39986022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 4e-44; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 83 - 293
Target Start/End: Original strand, 7542390 - 7542600
Alignment:
Q  83 agacacatcaaaagtgccaccgccaagatcaaagatgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccgca 182  Q
    ||||||||||||||||||||||||||||||||| |  |||| |||||| | |||  ||| ||  | ||| || | ||||||||||||||  || || |||    
T  7542390 agacacatcaaaagtgccaccgccaagatcaaaaacaaaaatatttcgctctccatcataatcagttctcttgtcaaggccatatgcaacagctgcggca 7542489  T
Q  183 gttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaa 282  Q
    || |||||||| |||  || ||| ||||||||||||||||||||||| |||||| | ||||||||||||||||| ||||||||||||||||| |||||||    
T  7542490 gtaggttcattcattgccctcataacattgaggccagcaatggcacccgcatctatagtggcttttcgttgagaatcattaaaataagcaggtacagtaa 7542589  T
Q  283 caactgcattc 293  Q
    |||||||||||    
T  7542590 caactgcattc 7542600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 67 - 295
Target Start/End: Original strand, 12234837 - 12235065
Alignment:
Q  67 ctttgagtgttagaagagacacatcaaaagtgccaccgccaagatcaaagatgaaaacatttcgttttccgacattatttgctcttttttgaaggccata 166  Q
    |||||| |||||| |||||||||||||||||||||||||| |||||||| |  |||| |||||||| ||| |||  ||  | ||| || | ||| |||||    
T  12234837 ctttgattgttaggagagacacatcaaaagtgccaccgccgagatcaaaaacaaaaatatttcgttctccaacacaatcagttctcttgtcaagaccata 12234936  T
Q  167 tgcaagggcagccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaa 266  Q
    |||||  || || ||  | ||||| || |||| || ||| |||||||||||||||||| ||||||||||| | || |||||||||||||| ||||| |||    
T  12234937 tgcaacagcggctgccatgggttcgttcattaccctcataacattgaggccagcaatgacaccagcatctatagttgcttttcgttgagaatcattgaaa 12235036  T
Q  267 taagcaggcacagtaacaactgcattctt 295  Q
    ||||||||||| |||||||||||||||||    
T  12235037 taagcaggcacggtaacaactgcattctt 12235065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 24 - 292
Target Start/End: Complemental strand, 16662055 - 16661787
Alignment:
Q  24 aggtgagtatctccggcagtggcttttacatcaaagctctcatctttgagtgttagaagagacacatcaaaagtgccaccgccaagatcaaagatgaaaa 123  Q
    |||||||| | ||| | ||||||||| || ||||||   ||| |||| | ||| || ||||||||||||||||| ||||| |||||||||||||  ||||    
T  16662055 aggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaa 16661956  T
Q  124 catttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggccagcaat 223  Q
     ||||| ||  ||  ||  |||   |||||| | ||||||||||||||  || || ||||| |||||||| ||||||| ||  || || |||||||||||    
T  16661955 tatttctttcaccatcacaattacttcttttgtcaaggccatatgcaatagctgctgcagtgggttcattgattatcctcacaacgttaaggccagcaat 16661856  T
Q  224 ggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaactgcatt 292  Q
    ||||||||||||  | ||||||||||| ||||| || |||||||||||||| ||||| |||||||||||    
T  16661855 ggcaccagcatccatggtggcttttcgctgagaatcgttaaaataagcaggaacagtgacaactgcatt 16661787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 74 - 295
Target Start/End: Original strand, 11999549 - 11999770
Alignment:
Q  74 tgttagaagagacacatcaaaagtgccaccgccaagatcaaagatgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagg 173  Q
    |||||| | ||||| |||||||||||||||||||||||||||||  ||||  |||| || ||| |||  ||  ||||| || | ||||||||||||||      
T  11999549 tgttagtatagacaaatcaaaagtgccaccgccaagatcaaagactaaaatgtttctttctccaacacaatcagctctcttgtcaaggccatatgcaaca 11999648  T
Q  174 gcagccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcag 273  Q
    |  || ||||| |||||||| |||| ||  || ||||||| ||||||||| ||||| |||||| | ||||||||||||||||| ||| |||||||||| |    
T  11999649 gttgcagcagtgggttcattcattacccttataacattgatgccagcaattgcaccggcatctatagtggcttttcgttgagaatcactaaaataagctg 11999748  T
Q  274 gcacagtaacaactgcattctt 295  Q
    | |||||||||||  |||||||    
T  11999749 gtacagtaacaacaacattctt 11999770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 74 - 295
Target Start/End: Original strand, 14703563 - 14703784
Alignment:
Q  74 tgttagaagagacacatcaaaagtgccaccgccaagatcaaagatgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagg 173  Q
    |||||| |||||||| |||||||| ||||| |||||||||||||  || | ||| |||| |||  ||| ||  | ||| || | ||||||||||||||      
T  14703563 tgttaggagagacacgtcaaaagtaccaccaccaagatcaaagacaaatatattacgttctccaccataatcagttctcttgtcaaggccatatgcaata 14703662  T
Q  174 gcagccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcag 273  Q
    || || || || |||||||| |||| || ||| ||||||||||| |||||  ||||||||||  | |||||||||| |||||| ||| ||||||||||||    
T  14703663 gctgcagctgtaggttcattcattaccctcataacattgaggccggcaataacaccagcatccatagtggcttttctttgagaatcactaaaataagcag 14703762  T
Q  274 gcacagtaacaactgcattctt 295  Q
    |||| |||||||||||||||||    
T  14703763 gcaccgtaacaactgcattctt 14703784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 75 - 295
Target Start/End: Complemental strand, 12258593 - 12258373
Alignment:
Q  75 gttagaagagacacatcaaaagtgccaccgccaagatcaaagatgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaaggg 174  Q
    ||||| ||||||||||||||||||||||| |||||||||||||  |||| ||| |||||| |||||  |||   |||||| | ||||||||||||||  |    
T  12258593 gttagtagagacacatcaaaagtgccaccaccaagatcaaagacaaaaatattccgtttttcgacacaattaattcttttgtcaaggccatatgcaaaag 12258494  T
Q  175 cagccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcagg 274  Q
    | || ||||| |||||||| | ||||  ||| ||||| |||||| ||||   |||  ||||| | |||||||| | ||| || ||| ||||||| |||||    
T  12258493 ctgcagcagtaggttcatttaatatcttcataacattcaggccaacaatattacccacatctatagtggctttcctttgtgaatcactaaaatatgcagg 12258394  T
Q  275 cacagtaacaactgcattctt 295  Q
    |||||||||||||||||||||    
T  12258393 cacagtaacaactgcattctt 12258373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 295
Target Start/End: Original strand, 43625576 - 43625788
Alignment:
Q  83 agacacatcaaaagtgccaccgccaagatcaaagatgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccgca 182  Q
    ||||||||||||||| ||||| ||||| ||||||||||||| |||||||| ||| |||  |||   ||| || | |||||| ||||| || ||||| ||     
T  43625576 agacacatcaaaagtaccaccaccaaggtcaaagatgaaaatatttcgttctccaacacaattaattctcttgttaaggccgtatgctagagcagcagct 43625675  T
Q  183 gttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaa 282  Q
    ||||||||||| ||||  || |  ||||| |||||  ||||| ||||| ||||| | ||||||||||| ||||| ||||| || ||||||||||| ||||    
T  43625676 gttggttcattgattactcgtaaaacattaaggccgacaatgacaccaacatctatggtggcttttcgctgagaatcattgaagtaagcaggcacggtaa 43625775  T
Q  283 caactgcattctt 295  Q
    |||||||||||||    
T  43625776 caactgcattctt 43625788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 90 - 295
Target Start/End: Complemental strand, 12245403 - 12245198
Alignment:
Q  90 tcaaaagtgccaccgccaagatcaaagatgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccgcagttggtt 189  Q
    |||||||||||||| ||||||||||| |  ||||  |||| || ||| |||  ||  ||||| |||| ||||||||||||||  || || ||||| ||||    
T  12245403 tcaaaagtgccaccaccaagatcaaacacaaaaatgtttctttctccaacacaatcagctctcttttcaaggccatatgcaacagctgcagcagtgggtt 12245304  T
Q  190 cattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaactgc 289  Q
    |||| |||| || ||| |||||||| |||||||| |  ||||||||| | || |||||||| ||||| ||| ||||||||||||| ||||||||||| ||    
T  12245303 cattcattaccctcataacattgagaccagcaattgagccagcatctatcgttgcttttcgctgagaatcactaaaataagcaggtacagtaacaacagc 12245204  T
Q  290 attctt 295  Q
    ||||||    
T  12245203 attctt 12245198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 295
Target Start/End: Complemental strand, 16657580 - 16657309
Alignment:
Q  24 aggtgagtatctccggcagtggcttttacatcaaagctctcatctttgagtgttagaagagacacatcaaaagtgccaccgccaagatcaaagatgaaaa 123  Q
    |||||||| | |||||||||||||||||| |||||    ||| | || | ||| || | ||||||||||||||| ||||||||||| |||||||  ||||    
T  16657580 aggtgagtgtttccggcagtggcttttacctcaaaaacatcacccttaattgtaaggatagacacatcaaaagtaccaccgccaaggtcaaagacaaaaa 16657481  T
Q  124 catttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggccagcaat 223  Q
     ||| ||||| ||  ||  ||    ||| || | ||| ||||||||||  || || ||||| |||||||| || || || || ||||| |||||||| ||    
T  16657480 tattccgtttaccatcacaatcacttctcttgtcaagaccatatgcaatagctgcagcagtaggttcattgataattcgaatgacattaaggccagcgat 16657381  T
Q  224 ggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaactgcattctt 295  Q
    ||||||||||||| | ||||||||||| || || ||||| || ||||| |||||||||||||| ||||||||    
T  16657380 ggcaccagcatctatggtggcttttcgctgcgaatcattgaagtaagctggcacagtaacaacagcattctt 16657309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 295
Target Start/End: Original strand, 35132616 - 35132824
Alignment:
Q  87 acatcaaaagtgccaccgccaagatcaaagatgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccgcagttg 186  Q
    ||||||||||||||||| |||||||| ||||  |||| |||| ||| |||  ||  ||  | ||| || | ||||||||||||||  || || ||||| |    
T  35132616 acatcaaaagtgccaccaccaagatcgaagacaaaaatattttgttctccagcacaatcagatctcttgtcaaggccatatgcaaccgctgcggcagtag 35132715  T
Q  187 gttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaac 286  Q
    ||||||| ||||  | ||| |||||| | |||||||| |||||||||||| | ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  35132716 gttcattcattactctcataacattgggaccagcaatagcaccagcatctatagtggcttttcgttgagaatcactaaaataagcaggcacagtaacaac 35132815  T
Q  287 tgcattctt 295  Q
    |||||||||    
T  35132816 tgcattctt 35132824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 158 - 295
Target Start/End: Complemental strand, 9335820 - 9335683
Alignment:
Q  158 aaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagag 257  Q
    ||||||||||||||  || || ||||| |||||||| |||||||| || ||||| ||||||||||| | |||||||||| | ||||| ||||| |||||     
T  9335820 aaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaaggccagcaatagtaccagcatctatggtggcctttcgctgagaa 9335721  T
Q  258 tcattaaaataagcaggcacagtaacaactgcattctt 295  Q
    ||||| || ||||| ||||| |||||||| ||||||||    
T  9335720 tcattgaagtaagctggcacggtaacaacggcattctt 9335683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 162 - 292
Target Start/End: Original strand, 30775495 - 30775625
Alignment:
Q  162 ccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcat 261  Q
    ||||||||||  || || ||||| || ||||||||||| | ||| ||||| || ||||||||||||||||||||  | ||||||||||| || |  ||||    
T  30775495 ccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcat 30775594  T
Q  262 taaaataagcaggcacagtaacaactgcatt 292  Q
    | ||||||||||||||||| | |||||||||    
T  30775595 tgaaataagcaggcacagtgataactgcatt 30775625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 54396729 - 54396800
Alignment:
Q  225 gcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaactgcattcttc 296  Q
    |||||||||||||| || ||||  |||||||| ||||| ||||||||||| ||||||||||| |||||||||    
T  54396729 gcaccagcatctttcgtagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcattcttc 54396800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 295
Target Start/End: Complemental strand, 23587634 - 23587525
Alignment:
Q  186 ggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaa 285  Q
    ||||||||||| || | ||  |||||||| |||| |||| |||| ||||||||||| ||||  ||||| || || || || |||||||||||||| ||||    
T  23587634 ggttcattaataattctcaacacattgagtccagaaatgacaccggcatcttttgtagcttgacgttgtgaatcgttgaagtaagcaggcacagttacaa 23587535  T
Q  286 ctgcattctt 295  Q
    | ||||||||    
T  23587534 cggcattctt 23587525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 117
Target Start/End: Original strand, 30775411 - 30775450
Alignment:
Q  78 agaagagacacatcaaaagtgccaccgccaagatcaaaga 117  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  30775411 agaagagacacatcaaaagtcccaccaccaagatcaaaga 30775450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 295
Target Start/End: Original strand, 12528602 - 12528880
Alignment:
Q  17 tcctcctaggtgagtatctccggcagtggcttttacatcaaagctctcatctttgagtgttagaagagacacatcaaaagtgccaccgccaagatcaaag 116  Q
    |||||| |||||||| |||||||||||||| || || || |||   | ||  || | ||| |||||||||||||||||||| ||||||||||| |||||     
T  12528602 tcctccaaggtgagtgtctccggcagtggccttgacttcgaagacattattctttactgtaagaagagacacatcaaaagttccaccgccaaggtcaaaa 12528701  T
Q  117 atgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggc 216  Q
    || ||||   |||  | | | | |  ||| ||||| ||||||| |||||||||||| ||||| ||||||||||| || |||||||| |||||||||||||    
T  12528702 ataaaaatccttctctcttcaagacaattagctctcttttgaatgccatatgcaagagcagctgcagttggttcgttgattatccgtattacattgaggc 12528801  T
Q  217 cagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaactgcattctt 295  Q
    |||||||| |||||||||| || ||||||  ||| || || ||||| ||||| || ||||| ||||  |||||||||||    
T  12528802 cagcaatgacaccagcatccttggtggctcgtcgctgcgaatcattgaaatacgctggcaccgtaatcactgcattctt 12528880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 81 - 295
Target Start/End: Original strand, 43745011 - 43745223
Alignment:
Q  81 agagacacatcaaaagtgccaccgccaagatcaaagatgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccg 180  Q
    ||||||||||||||||| ||||| || || ||||||||||||| ||||| |  ||  |||   || | ||| ||||  || ||||||||||  || || |    
T  43745011 agagacacatcaaaagtcccaccacccaggtcaaagatgaaaatatttcttcctcgcacagagttagttctcttttccagaccatatgcaatagctgcag 43745110  T
Q  181 cagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagt 280  Q
    |||| |||||||| ||||||  ||| ||||  || |||||||||||||||||||||   |||||||| || ||| | ||||| |||||||| ||||||||    
T  43745111 cagtgggttcattgattatcttcataacatcaagcccagcaatggcaccagcatcta--gtggctttccgctgataatcattgaaataagccggcacagt 43745208  T
Q  281 aacaactgcattctt 295  Q
    |||||||||||||||    
T  43745209 aacaactgcattctt 43745223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 5e-25; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 186 - 292
Target Start/End: Original strand, 15595308 - 15595414
Alignment:
Q  186 ggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaa 285  Q
    |||||||| |||| ||| || ||||| ||||||||||||||||| |||||| | ||||||||||||||||| ||||| | |||||||||||| |||||||    
T  15595308 ggttcattgattacccgtataacattaaggccagcaatggcacctgcatctatagtggcttttcgttgagaatcattgagataagcaggcacggtaacaa 15595407  T
Q  286 ctgcatt 292  Q
    |||||||    
T  15595408 ctgcatt 15595414  T

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Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 295
Target Start/End: Complemental strand, 34466799 - 34466585
Alignment:
Q  81 agagacacatcaaaagtgccaccgccaagatcaaagatgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccg 180  Q
    ||||||||||||||||| ||||| ||||| ||||||| ||||| ||||| || | | |||   |  ||||| || | ||| ||||||||||  || || |    
T  34466799 agagacacatcaaaagtcccaccaccaaggtcaaagacgaaaatatttccttcttccacaaagtcagctctcttgtcaagtccatatgcaatagctgcag 34466700  T
Q  181 cagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagt 280  Q
    |||| |||||||| |||||  |||  ||||| ||||||||||| | |||||||||    || |||||||| ||||| |||||||||||||||||||| ||    
T  34466699 cagtgggttcattgattatttgcaaaacattaaggccagcaatagtaccagcatccacagtagcttttcgctgagaatcattaaaataagcaggcacggt 34466600  T
Q  281 aacaactgcattctt 295  Q
     | ||||||||||||    
T  34466599 gataactgcattctt 34466585  T

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Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 207 - 296
Target Start/End: Complemental strand, 4678438 - 4678349
Alignment:
Q  207 acattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaactgcattcttc 296  Q
    ||||| || ||||||||||||||||||||| | || |||||||||||||| ||||| || || |||||||||||||||||  ||||||||    
T  4678438 acattaagtccagcaatggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacattcttc 4678349  T

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Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 15595189 - 15595232
Alignment:
Q  74 tgttagaagagacacatcaaaagtgccaccgccaagatcaaaga 117  Q
    |||||| | ||||||||||||||||||||| |||||||||||||    
T  15595189 tgttaggatagacacatcaaaagtgccaccaccaagatcaaaga 15595232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 295
Target Start/End: Original strand, 28220113 - 28220327
Alignment:
Q  81 agagacacatcaaaagtgccaccgccaagatcaaagatgaaaacatttcgttttccgacattatttgctcttttttgaaggccatatgcaagggcagccg 180  Q
    ||||||||||||||||| ||||| || || ||||||||||||| |||||||| ||| |     || | |||||| |  |  ||||||||||  ||||| |    
T  28220113 agagacacatcaaaagtcccaccacccaggtcaaagatgaaaatatttcgttctcccatgcagttagttcttttgtccaatccatatgcaatagcagcag 28220212  T
Q  181 cagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagt 280  Q
    |||| |||||||| | |||||  |  ||||| || |||||||||| ||| |||||| | |||||||| || ||| | ||||| |||||||||||||||||    
T  28220213 cagtgggttcattgactatccttagaacatttagaccagcaatggtacctgcatctatggtggctttccgctgataatcattgaaataagcaggcacagt 28220312  T
Q  281 aacaactgcattctt 295  Q
    || ||||||||||||    
T  28220313 aataactgcattctt 28220327  T

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Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 11156513 - 11156631
Alignment:
Q  162 ccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcat 261  Q
    ||||||||||  ||||| ||||  || ||||| ||||| ||||| |||||||||||||||||  |||| |||||||  ||||  |  ||||| |||||||    
T  11156513 ccatatgcaattgcagctgcagaaggctcattgattattcgcataacattgaggccagcaataacacccgcatcttgggtggactggcgttgtgagtcat 11156612  T
Q  262 taaaataagcaggcacagt 280  Q
    |||| ||||||||||||||    
T  11156613 taaagtaagcaggcacagt 11156631  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 11170809 - 11170887
Alignment:
Q  158 aaggccatatgcaagggcagccgcagttggttcattaattatccgcattacattgaggccagcaatggcaccagcatct 236  Q
    ||||||||||||||  ||||| ||||| || ||||| | ||| ||||  ||||||||||||||||| ||||| ||||||    
T  11170809 aaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatagcacccgcatct 11170887  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 28910852 - 28910958
Alignment:
Q  189 tcattaattatccgcattacattgaggccagcaatggcaccagcatcttttgtggcttttcgttgagagtcattaaaataagcaggcacagtaacaactg 288  Q
    ||||| ||||||||||| ||||| || |   ||||||||||||||||| | |||||||| |  | ||| ||||| |||||| ||| || |||||||| ||    
T  28910852 tcattgattatccgcataacattaagcctgacaatggcaccagcatctatggtggctttcctctaagaatcattgaaataaccagtcaaagtaacaattg 28910951  T
Q  289 cattctt 295  Q
    |||||||    
T  28910952 cattctt 28910958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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