View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14243_low_16 (Length: 268)
Name: NF14243_low_16
Description: NF14243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14243_low_16 |
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Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 11 - 254
Target Start/End: Original strand, 7905847 - 7906090
Alignment:
| Q |
11 |
accaaactttaaaaggcacaagactgaactccgagatatttcggagaaacaaagctgataaatggatccaaagtcaccaagaatctgcttacacaatcgt |
110 |
Q |
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| T |
7905847 |
accaaaatttaaaaggcacaagaccgaactccgagatatttcggagaaacaaagctgataaatggatccaaagtcaccaagaatctgcttacacaatcgt |
7905946 |
T |
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| Q |
111 |
ttctcgctaacaagatacgtctgaacaatgaccttcatcgcccgaatccatttctttatccggctattcaaacaatgccactccagtttaagcacacttt |
210 |
Q |
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| T |
7905947 |
ttctcgctaacaagatacgtctgaacaatgaccttcatcgcccgaatccatttctttatccggctattcaaacaatgccactccattttaagcacacttt |
7906046 |
T |
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| Q |
211 |
tgatgcttagtttttcgatttctagaatgacaaagtactcagcc |
254 |
Q |
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| T |
7906047 |
cgatgcttagtttttcgatttctagaatgacaaagtactcagcc |
7906090 |
T |
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