View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14243_low_22 (Length: 238)
Name: NF14243_low_22
Description: NF14243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14243_low_22 |
 |  |
|
| [»] chr8 (5 HSPs) |
 |  |
|
| [»] scaffold0565 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 100; Significance: 1e-49; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 127 - 238
Target Start/End: Original strand, 9410789 - 9410900
Alignment:
| Q |
127 |
tagcaaatatataaaaatttctaaaccttcactcttttccactaaaaaatttataacctatagaagtttaggcaactaacggcatcgtggaaagatccga |
226 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
9410789 |
tagcaagtatataaaaatttctaaactttcactcttttccactaaaaaatttataacctatagaagtttaggcaactaccggcatcgtggaaagatccga |
9410888 |
T |
 |
| Q |
227 |
gacaaatatacc |
238 |
Q |
| |
|
|||||||||||| |
|
|
| T |
9410889 |
gacaaatatacc |
9410900 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 9409738 - 9409796
Alignment:
| Q |
21 |
ggatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccac |
79 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9409738 |
ggatattccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccac |
9409796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 11789690 - 11789632
Alignment:
| Q |
21 |
ggatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccac |
79 |
Q |
| |
|
|||||||||||||| ||||||| |||||||| ||||||||| |||||||||||||||| |
|
|
| T |
11789690 |
ggatactccaaaacggagacgtgcccgtaccagatacgtatcagataccgatactccac |
11789632 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 24728846 - 24728788
Alignment:
| Q |
21 |
ggatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccac |
79 |
Q |
| |
|
|||||||||||||| ||||||||| |||| || ||||||||| |||||| ||||||||| |
|
|
| T |
24728846 |
ggatactccaaaacggagacgtactcgtatcggatacgtatcagataccaatactccac |
24728788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 76
Target Start/End: Original strand, 13003199 - 13003238
Alignment:
| Q |
37 |
agacgtacccgtaccgaatacgtatcggataccgatactc |
76 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
13003199 |
agacgtacccgtatcaaatacgtatcggataccgatactc |
13003238 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 2295181 - 2295238
Alignment:
| Q |
21 |
ggatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactcca |
78 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
2295181 |
ggatactcaaaaacagagacgtacccgtaccggatacgtgtcggataccgatactcca |
2295238 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 38948779 - 38948720
Alignment:
| Q |
20 |
tggatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccac |
79 |
Q |
| |
|
|||||||||||||| |||||||| ||||| | |||||||||||||||||||||||||| |
|
|
| T |
38948779 |
tggatactccaaaatggagacgtatccgtattggatacgtatcggataccgatactccac |
38948720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 40216802 - 40216862
Alignment:
| Q |
21 |
ggatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccacag |
81 |
Q |
| |
|
||||||||||||||||| || |||||||| || ||| |||||||||| |||||| |||||| |
|
|
| T |
40216802 |
ggatactccaaaacagaaacatacccgtatcggatatgtatcggatatcgataccccacag |
40216862 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 53586219 - 53586275
Alignment:
| Q |
23 |
atactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccac |
79 |
Q |
| |
|
|||||||||||| | |||||||||||| | |||||||||| |||||||||| |||| |
|
|
| T |
53586219 |
atactccaaaacggtgacgtacccgtatcagatacgtatcgaataccgatacgccac |
53586275 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 45; Significance: 9e-17; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 35298252 - 35298312
Alignment:
| Q |
21 |
ggatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccacag |
81 |
Q |
| |
|
||||||||||||||| ||||||||| ||| || |||||||||||||||||||||||||||| |
|
|
| T |
35298252 |
ggatactccaaaacaaagacgtacctgtatcggatacgtatcggataccgatactccacag |
35298312 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 38221929 - 38221872
Alignment:
| Q |
22 |
gatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccac |
79 |
Q |
| |
|
||||||||||||| |||||||||||||| || |||||||| ||||||||||||||||| |
|
|
| T |
38221929 |
gatactccaaaacggagacgtacccgtatcggatacgtattggataccgatactccac |
38221872 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 42795056 - 42795000
Alignment:
| Q |
23 |
atactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccac |
79 |
Q |
| |
|
|||||||||||| ||||||||||| ||| | |||||||| | ||||||||||||||| |
|
|
| T |
42795056 |
atactccaaaacggagacgtacccatactggatacgtatggaataccgatactccac |
42795000 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 36467024 - 36467075
Alignment:
| Q |
30 |
aaaacagagacgtacccgtaccgaatacgtatcggataccgatactccacag |
81 |
Q |
| |
|
||||| ||||||||||| || || ||| |||||||||||||||||||||||| |
|
|
| T |
36467024 |
aaaacggagacgtacccatatcggatatgtatcggataccgatactccacag |
36467075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 17328525 - 17328583
Alignment:
| Q |
22 |
gatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccaca |
80 |
Q |
| |
|
||||||||||||| |||||||||||| | || ||| || || ||||||||||||||||| |
|
|
| T |
17328525 |
gatactccaaaacggagacgtacccgcatcggatatgtttcagataccgatactccaca |
17328583 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 21812172 - 21812230
Alignment:
| Q |
21 |
ggatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccac |
79 |
Q |
| |
|
||||||||||||| | |||| || ||||| || ||||||||| |||||||||||||||| |
|
|
| T |
21812172 |
ggatactccaaaataaagacatatccgtatcggatacgtatcagataccgatactccac |
21812230 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 14749375 - 14749431
Alignment:
| Q |
21 |
ggatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactcc |
77 |
Q |
| |
|
|||||| |||||| |||||||||| |||| | ||||||||||||| |||||||||| |
|
|
| T |
14749375 |
ggataccccaaaatggagacgtacctgtactggatacgtatcggattccgatactcc |
14749431 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 42040774 - 42040716
Alignment:
| Q |
21 |
ggatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccac |
79 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| ||||||||| |||||||||||||||| |
|
|
| T |
42040774 |
ggatactccaaaacggagacgtactcgtaccggatacgtatcagataccgatactccac |
42040716 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 25311380 - 25311318
Alignment:
| Q |
18 |
cctggatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccaca |
80 |
Q |
| |
|
||||||||||||||||| |||||||||||||| || |||| ||| ||||| ||||||||||| |
|
|
| T |
25311380 |
cctggatactccaaaacggagacgtacccgtatcggatacatattagatactgatactccaca |
25311318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 48152836 - 48152894
Alignment:
| Q |
21 |
ggatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccac |
79 |
Q |
| |
|
|||||||||||||| |||||||| | ||| || |||||||| |||||| |||||||||| |
|
|
| T |
48152836 |
ggatactccaaaacggagacgtatctgtatcggatacgtattggatactgatactccac |
48152894 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 2032673 - 2032615
Alignment:
| Q |
21 |
ggatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccac |
79 |
Q |
| |
|
||||||| |||||| |||| |||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
2032673 |
ggatactacaaaacggagatgtactcgtaccgaatacgtatcggataccgatactccac |
2032615 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 12284009 - 12283952
Alignment:
| Q |
22 |
gatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccac |
79 |
Q |
| |
|
|||||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |
|
|
| T |
12284009 |
gatactccaaaatgaagacgtatccgtatcggatacgtatcggataccgatactccac |
12283952 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 2988443 - 2988384
Alignment:
| Q |
22 |
gatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccacag |
81 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||| ||||| |||||||||||| |
|
|
| T |
2988443 |
gatactccaaaacagagacgtactcgtattagatacgtatcagatactgatactccacag |
2988384 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 17533707 - 17533652
Alignment:
| Q |
21 |
ggatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactc |
76 |
Q |
| |
|
||||||| ||||| ||||||| |||||| |||||| ||||||||||||||||||| |
|
|
| T |
17533707 |
ggatacttcaaaatggagacgtgcccgtaacgaatatgtatcggataccgatactc |
17533652 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 29231394 - 29231336
Alignment:
| Q |
21 |
ggatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccac |
79 |
Q |
| |
|
|||||||||||||| |||| || ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
29231394 |
ggatactccaaaacggagatgtgcccgtaccggatacgtatcggataccgatactccac |
29231336 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 8229137 - 8229195
Alignment:
| Q |
21 |
ggatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccac |
79 |
Q |
| |
|
|||||| ||||||| |||||||||||||| || ||||||||| |||||||||||||||| |
|
|
| T |
8229137 |
ggataccccaaaacggagacgtacccgtatcggatacgtatcagataccgatactccac |
8229195 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 27925151 - 27925209
Alignment:
| Q |
21 |
ggatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccac |
79 |
Q |
| |
|
|||||||||||||||||||||||| |||| || ||||||||| ||||||||| |||||| |
|
|
| T |
27925151 |
ggatactccaaaacagagacgtactcgtatcggatacgtatcagataccgatcctccac |
27925209 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 7056908 - 7056965
Alignment:
| Q |
19 |
ctggatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactc |
76 |
Q |
| |
|
|||||||||||||||| |||||||||| ||| | ||| ||||||||||||||||||| |
|
|
| T |
7056908 |
ctggatactccaaaacggagacgtacctgtatcagataagtatcggataccgatactc |
7056965 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 40693745 - 40693794
Alignment:
| Q |
30 |
aaaacagagacgtacccgtaccgaatacgtatcggataccgatactccac |
79 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
40693745 |
aaaacagagacgtacctgtaccggatacgtatcggataccgatactccac |
40693794 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 41827539 - 41827581
Alignment:
| Q |
23 |
atactccaaaacagagacgtacccgtaccgaatacgtatcgga |
65 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
41827539 |
atactccaaaacggagacgtacccgtaccgaatacgtatcgga |
41827581 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 17116056 - 17116108
Alignment:
| Q |
23 |
atactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatact |
75 |
Q |
| |
|
|||||||||||| ||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
17116056 |
atactccaaaacggagacgtacacgtaccagatacgtatcggataccgatact |
17116108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 4973398 - 4973348
Alignment:
| Q |
23 |
atactccaaaacagagacgtacccgtaccgaatacgtatcggataccgata |
73 |
Q |
| |
|
|||||||||||| |||||||||||||| | ||||||||| ||||||||||| |
|
|
| T |
4973398 |
atactccaaaacggagacgtacccgtatcaaatacgtattggataccgata |
4973348 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 11767961 - 11767908
Alignment:
| Q |
22 |
gatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatact |
75 |
Q |
| |
|
||||||| ||||| |||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
11767961 |
gatactctaaaacggagacgtacccgtattggatacgtatcggataccgatact |
11767908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 38683240 - 38683182
Alignment:
| Q |
18 |
cctggatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactc |
76 |
Q |
| |
|
|||| |||||||||||| ||||||||| ||| |||||| |||||||| |||||||||| |
|
|
| T |
38683240 |
cctgaatactccaaaacggagacgtacttgtatcgaatatgtatcggacaccgatactc |
38683182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 50726469 - 50726527
Alignment:
| Q |
21 |
ggatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccac |
79 |
Q |
| |
|
||||||| ||| ||||||||||||||||| || ||||||||| ||||||||| ||||| |
|
|
| T |
50726469 |
ggatacttcaagacagagacgtacccgtatcggatacgtatcatataccgatattccac |
50726527 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 45472417 - 45472477
Alignment:
| Q |
19 |
ctggatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccac |
79 |
Q |
| |
|
||||||||| |||||| ||||||||| |||| | |||||||||||||||||||||||||| |
|
|
| T |
45472417 |
ctggatacttcaaaacggagacgtactcgtatccgatacgtatcggataccgatactccac |
45472477 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 35433311 - 35433368
Alignment:
| Q |
22 |
gatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactccac |
79 |
Q |
| |
|
||||| |||||| ||||||||||||||| | ||||||||||||| |||||||||||| |
|
|
| T |
35433311 |
gataccccaaaatggagacgtacccgtactggatacgtatcggattccgatactccac |
35433368 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 7629495 - 7629447
Alignment:
| Q |
21 |
ggatactccaaaacagagacgt-acccgtaccgaatacgtatcggatac |
68 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||| ||| ||||||||||| |
|
|
| T |
7629495 |
ggatactccaaaacggagacgtaacccgtaccggatatgtatcggatac |
7629447 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0565 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0565
Description:
Target: scaffold0565; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 7710 - 7764
Alignment:
| Q |
22 |
gatactccaaaacagagacgtacccgtaccgaatacgtatcggataccgatactc |
76 |
Q |
| |
|
|||||| |||||| |||||||| ||||| || ||||||||| ||||||||||||| |
|
|
| T |
7710 |
gatacttcaaaacggagacgtatccgtatcggatacgtatcagataccgatactc |
7764 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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