View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14244_low_9 (Length: 247)
Name: NF14244_low_9
Description: NF14244
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14244_low_9 |
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Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 8686250 - 8686491
Alignment:
| Q |
1 |
attgagttaaaagaggacttaaatttttgtgaggatttttagtgcaatatagaatagagaattattttgatcttgaaggtggaaagaataaaatattttt |
100 |
Q |
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| T |
8686250 |
attgagttaaaagaggacttaaatttttgtgaggatttttagtgcaatatagaatagagaattattttgatcttgaaggtggaaagaataaaatatttta |
8686349 |
T |
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| Q |
101 |
aaatagagtatcagtttaaaataaaattactatttagtactaatcaaaactcactaatttttaatttttaacccggaaacacaagaagttaacaaggaga |
200 |
Q |
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| T |
8686350 |
aaatagagtatcagtttaaaataaaattactatttagtactaatcaaaactcactaatttttaatttttaacccggaaactcaagaagttaacaagggga |
8686449 |
T |
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| Q |
201 |
taagaaactcaataagtaccgaccaaaactaactcctttgct |
242 |
Q |
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| T |
8686450 |
taagaaactcaataagtaccgaccaaaactaactactttgct |
8686491 |
T |
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