View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14245_high_27 (Length: 266)
Name: NF14245_high_27
Description: NF14245
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14245_high_27 |
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Alignment Details
Target: chr2 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 11444174 - 11444409
Alignment:
| Q |
1 |
ttgcaacaaatgtaaaaacataaggatcaaaacgttcaatcttaaaa---gggactatttttatgagttttataaaatagaaagtgcaattaatctttat |
97 |
Q |
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| T |
11444174 |
ttgcaacaaatgtaaaaacataaggatcaaaacgttcaatcttaaaacaggggactatttttatgagttttataaaatagaaagtgcaattaatctttat |
11444273 |
T |
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| Q |
98 |
tttctcttaaaatgcctttactctatgtcatgctttaagttcccatgataaagatatttgacatggtgcaatacttgtatttgtttaagattatattcat |
197 |
Q |
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| T |
11444274 |
tttctcttaaaatgc------------------tttaagttcccatgataaagatatttcacatggtgcaatacttgtatttgtttaagattatattcat |
11444355 |
T |
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| Q |
198 |
ggttcttatgttgattccaaactgtgacaaacgagggtaaaattatccacatcc |
251 |
Q |
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| T |
11444356 |
ggttcttatgttgattccaaactgtgacaaacgagtgtaaaattatccacatcc |
11444409 |
T |
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