View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14245_low_16 (Length: 360)
Name: NF14245_low_16
Description: NF14245
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14245_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 4 - 344
Target Start/End: Original strand, 44095484 - 44095831
Alignment:
| Q |
4 |
cgacgggtcatgcacgaagctaacgtgagaaatactactccaatgttaacatatatttattcgtcaaaataaaatgaatcaaagataaagnnnnnnnnnt |
103 |
Q |
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||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
44095484 |
cgacgggtcatgcacgaagtttacgtgaaaaatactactccaatgttaacatatatttattcgtcaaaataaaatgaatcaaagataaagaaaaaaaa-t |
44095582 |
T |
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| Q |
104 |
cttctaagttatatttgtattggtatgtttagagaaaaataaatggaaaggatagttttctataacatcaaa--------aacgaaaaaggatagttttc |
195 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |
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| T |
44095583 |
cttctaagttatatttgtattggtatttttagagaaaaataaatggaaaggatagttttctataacatcaaagaaaaaaaaaaaaaaaaggatagttttc |
44095682 |
T |
|
| Q |
196 |
tagaacaaagtgagtaaatttataaagtggagtgaaataagtttgtaaataatacttttgaattttctcacgtaatagaaattggataagttatcaaaat |
295 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44095683 |
tagaacaaagtgagtaaatttatgaagtggagtgaaataagtttgtaaataatacttttgaattttctcacgtaatagaaattggataagttatcaaaat |
44095782 |
T |
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| Q |
296 |
tattcaaagaaaatatatgccctaccttttctttttgcagcttagtgcc |
344 |
Q |
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|||||||||||||| |||||||||||||||||||||||| ||||||||| |
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| T |
44095783 |
tattcaaagaaaatctatgccctaccttttctttttgcaacttagtgcc |
44095831 |
T |
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