View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14245_low_23 (Length: 321)
Name: NF14245_low_23
Description: NF14245
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14245_low_23 |
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Alignment Details
Target: chr8 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 3 - 304
Target Start/End: Original strand, 7141898 - 7142199
Alignment:
| Q |
3 |
aataaataaataaaagacaaatgaggatgttaaataaaattgcatgttatcatttggttcatctttcaattttcttctcctgttttcattctttatcaac |
102 |
Q |
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| T |
7141898 |
aataaataaataaaagacaaatgaggatgttaaataaaattgcatgttatcatttggttcatcttttaattttcttctcctgttttcattctttatcaac |
7141997 |
T |
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| Q |
103 |
aagtatgttgaagtcggttgaaaatattgatggtgaacacagtcaccaaaaacaaaggataccaaaatcatactcttagcgcctatttcatgcaaccgag |
202 |
Q |
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| T |
7141998 |
aagtatgttgaagtcggttgaaaatattgatggtgaacacagtcaccaaaaacaaaggataccaaaatcatactcttagcgcctatttcatgcacccgag |
7142097 |
T |
|
| Q |
203 |
tgaaaatccacacattcttcttgttactccattattactatatggtaacaattactaatcttggtcacttgtgatgacaatatctttaagatcaaagtac |
302 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
7142098 |
tgaaaatccacacattcttcttgttactccattattactatatggtaacaattactaatcttggtcacttgtgatgacaatagctttaagatcaaagtac |
7142197 |
T |
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| Q |
303 |
at |
304 |
Q |
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|| |
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| T |
7142198 |
at |
7142199 |
T |
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