View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14246_high_9 (Length: 453)

Name: NF14246_high_9
Description: NF14246
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14246_high_9
NF14246_high_9
[»] chr1 (16 HSPs)
chr1 (14-437)||(26279766-26280189)
chr1 (14-399)||(18516879-18517254)
chr1 (14-399)||(18129721-18130103)
chr1 (177-366)||(23054388-23054577)
chr1 (188-369)||(21683075-21683255)
chr1 (142-364)||(9346778-9346998)
chr1 (142-369)||(16869981-16870208)
chr1 (257-363)||(20109897-20110003)
chr1 (171-437)||(26703505-26703771)
chr1 (255-353)||(1090490-1090590)
chr1 (247-365)||(20909429-20909548)
chr1 (237-318)||(16478658-16478739)
chr1 (14-78)||(16478453-16478516)
chr1 (255-321)||(31359377-31359443)
chr1 (40-118)||(9347036-9347114)
chr1 (42-70)||(21682947-21682975)
[»] chr5 (19 HSPs)
chr5 (14-369)||(20969212-20969580)
chr5 (45-369)||(31588818-31589139)
chr5 (142-393)||(26119723-26119976)
chr5 (5-368)||(13692435-13692780)
chr5 (189-374)||(27057325-27057510)
chr5 (176-399)||(23589697-23589921)
chr5 (218-369)||(39798857-39799008)
chr5 (257-369)||(17262747-17262860)
chr5 (218-363)||(22585976-22586122)
chr5 (257-369)||(34638463-34638575)
chr5 (198-369)||(20567817-20567988)
chr5 (255-369)||(27276156-27276273)
chr5 (257-319)||(20237397-20237459)
chr5 (255-365)||(2152918-2153029)
chr5 (41-120)||(27057559-27057638)
chr5 (260-365)||(16607532-16607638)
chr5 (255-320)||(34637580-34637645)
chr5 (49-77)||(7745435-7745463)
chr5 (18-74)||(18672491-18672546)
[»] chr8 (9 HSPs)
chr8 (14-369)||(12193914-12194263)
chr8 (14-369)||(12438342-12438691)
chr8 (142-393)||(17916735-17916988)
chr8 (198-398)||(18558002-18558203)
chr8 (181-429)||(19505394-19505641)
chr8 (192-312)||(1208589-1208709)
chr8 (255-369)||(12541639-12541755)
chr8 (19-151)||(12541853-12541983)
chr8 (309-369)||(1209838-1209899)
[»] chr6 (30 HSPs)
chr6 (14-369)||(24398677-24399045)
chr6 (46-399)||(10704367-10704702)
chr6 (142-368)||(13145151-13145379)
chr6 (142-399)||(23231174-23231428)
chr6 (39-399)||(24718538-24718903)
chr6 (164-399)||(16462575-16462811)
chr6 (172-366)||(18171966-18172160)
chr6 (191-369)||(23006008-23006186)
chr6 (191-369)||(23782180-23782358)
chr6 (136-369)||(24728460-24728685)
chr6 (171-366)||(17445590-17445785)
chr6 (181-437)||(31127284-31127540)
chr6 (257-437)||(26185662-26185842)
chr6 (255-365)||(25930497-25930608)
chr6 (255-369)||(32335839-32335954)
chr6 (255-366)||(18026782-18026895)
chr6 (172-272)||(14325309-14325409)
chr6 (172-272)||(14418319-14418419)
chr6 (293-369)||(17867583-17867659)
chr6 (293-369)||(17877366-17877442)
chr6 (257-392)||(30451553-30451689)
chr6 (282-399)||(19875821-19875940)
chr6 (177-365)||(7812034-7812223)
chr6 (257-327)||(12348157-12348227)
chr6 (41-103)||(23231447-23231509)
chr6 (44-105)||(31127166-31127227)
chr6 (44-136)||(26185951-26186043)
chr6 (257-316)||(25595953-25596012)
chr6 (188-232)||(25592738-25592782)
chr6 (163-195)||(25930689-25930721)
[»] chr3 (36 HSPs)
chr3 (14-369)||(13653933-13654301)
chr3 (40-364)||(16794096-16794418)
chr3 (162-399)||(20418219-20418456)
chr3 (14-369)||(8728783-8729138)
chr3 (14-369)||(9080670-9081025)
chr3 (181-369)||(21317408-21317596)
chr3 (171-399)||(19197820-19198049)
chr3 (163-369)||(22766470-22766672)
chr3 (142-399)||(16882275-16882535)
chr3 (181-320)||(3087603-3087742)
chr3 (184-369)||(315102-315286)
chr3 (254-399)||(14007558-14007704)
chr3 (207-365)||(14077329-14077487)
chr3 (216-369)||(13699375-13699528)
chr3 (265-369)||(4243208-4243311)
chr3 (124-263)||(7477700-7477840)
chr3 (216-363)||(10851832-10851979)
chr3 (255-369)||(16305188-16305303)
chr3 (14-120)||(13699589-13699694)
chr3 (171-369)||(14072707-14072906)
chr3 (237-381)||(27851546-27851693)
chr3 (199-365)||(17697630-17697797)
chr3 (256-368)||(11078665-11078778)
chr3 (182-369)||(17762058-17762245)
chr3 (182-369)||(19063378-19063565)
chr3 (162-226)||(7494428-7494492)
chr3 (247-387)||(27374763-27374912)
chr3 (255-320)||(2903214-2903279)
chr3 (17-106)||(7494570-7494659)
chr3 (128-200)||(50721913-50721986)
chr3 (128-200)||(50790863-50790936)
chr3 (33-105)||(3087781-3087853)
chr3 (22-150)||(20418434-20418561)
chr3 (274-320)||(15552189-15552235)
chr3 (341-393)||(16880009-16880062)
chr3 (264-366)||(6253441-6253545)
[»] scaffold0522 (2 HSPs)
scaffold0522 (142-399)||(4131-4389)
scaffold0522 (142-399)||(11414-11672)
[»] scaffold0074 (1 HSPs)
scaffold0074 (147-369)||(31642-31864)
[»] chr4 (19 HSPs)
chr4 (191-424)||(2651765-2651989)
chr4 (190-398)||(20570920-20571128)
chr4 (172-399)||(13027760-13027988)
chr4 (142-391)||(14357003-14357253)
chr4 (14-369)||(14902210-14902558)
chr4 (162-399)||(16324409-16324646)
chr4 (14-151)||(2651992-2652128)
chr4 (220-369)||(18774060-18774209)
chr4 (226-382)||(20577283-20577439)
chr4 (257-381)||(18394532-18394659)
chr4 (296-399)||(19889020-19889124)
chr4 (255-363)||(10249832-10249941)
chr4 (255-319)||(17812280-17812344)
chr4 (40-224)||(18776147-18776343)
chr4 (271-328)||(11915757-11915814)
chr4 (14-106)||(16324240-16324331)
chr4 (255-321)||(17526392-17526458)
chr4 (14-74)||(19888858-19888917)
chr4 (271-315)||(41114767-41114811)
[»] scaffold0311 (1 HSPs)
scaffold0311 (174-399)||(20056-20281)
[»] chr7 (21 HSPs)
chr7 (16-399)||(9063950-9064347)
chr7 (148-367)||(16307648-16307868)
chr7 (171-399)||(13172296-13172525)
chr7 (181-365)||(18361536-18361720)
chr7 (219-369)||(18047827-18047977)
chr7 (255-369)||(16105022-16105137)
chr7 (255-369)||(5035390-5035504)
chr7 (171-365)||(7487850-7488043)
chr7 (255-362)||(16412015-16412124)
chr7 (46-158)||(18047705-18047817)
chr7 (256-320)||(14114102-14114166)
chr7 (256-320)||(14423752-14423816)
chr7 (252-380)||(16412737-16412857)
chr7 (252-320)||(2501092-2501160)
chr7 (167-205)||(5035510-5035548)
chr7 (42-75)||(4549969-4550002)
chr7 (255-316)||(11572281-11572342)
chr7 (255-320)||(15871124-15871189)
chr7 (252-320)||(16472745-16472813)
chr7 (40-106)||(16307519-16307585)
chr7 (42-74)||(18361436-18361468)
[»] scaffold1026 (1 HSPs)
scaffold1026 (40-399)||(2954-3314)
[»] chr2 (15 HSPs)
chr2 (142-369)||(24157844-24158074)
chr2 (171-399)||(24440621-24440849)
chr2 (162-369)||(22383484-22383692)
chr2 (192-399)||(21846130-21846338)
chr2 (189-363)||(21910980-21911154)
chr2 (171-366)||(20568152-20568347)
chr2 (237-369)||(15668508-15668641)
chr2 (243-365)||(10896391-10896514)
chr2 (255-369)||(25918657-25918772)
chr2 (255-365)||(24844151-24844262)
chr2 (255-369)||(33705983-33706099)
chr2 (252-316)||(14793967-14794031)
chr2 (236-327)||(19320362-19320453)
chr2 (255-321)||(27640215-27640281)
chr2 (252-320)||(22683493-22683561)
[»] scaffold0772 (1 HSPs)
scaffold0772 (134-399)||(735-1003)
[»] scaffold0758 (1 HSPs)
scaffold0758 (184-437)||(4219-4472)
[»] scaffold0040 (1 HSPs)
scaffold0040 (14-369)||(3746-4114)
[»] scaffold0364 (1 HSPs)
scaffold0364 (142-399)||(10269-10529)
[»] scaffold0002 (2 HSPs)
scaffold0002 (14-399)||(112196-112574)
scaffold0002 (45-105)||(116094-116154)
[»] scaffold0490 (1 HSPs)
scaffold0490 (142-351)||(7360-7570)
[»] scaffold0011 (1 HSPs)
scaffold0011 (188-399)||(59545-59756)
[»] scaffold0351 (3 HSPs)
scaffold0351 (238-398)||(9217-9373)
scaffold0351 (14-105)||(9018-9108)
scaffold0351 (148-205)||(9166-9223)
[»] scaffold0622 (3 HSPs)
scaffold0622 (255-369)||(3381-3495)
scaffold0622 (148-238)||(1763-1853)
scaffold0622 (255-317)||(2730-2792)
[»] scaffold0043 (1 HSPs)
scaffold0043 (255-369)||(1816-1931)
[»] scaffold0003 (4 HSPs)
scaffold0003 (255-362)||(727-836)
scaffold0003 (255-310)||(416028-416083)
scaffold0003 (252-380)||(1449-1569)
scaffold0003 (181-243)||(415968-416030)
[»] scaffold1107 (1 HSPs)
scaffold1107 (256-327)||(2339-2410)
[»] scaffold0067 (1 HSPs)
scaffold0067 (257-327)||(16400-16470)
[»] scaffold0035 (1 HSPs)
scaffold0035 (260-365)||(29818-29924)
[»] scaffold0498 (1 HSPs)
scaffold0498 (255-380)||(3284-3411)
[»] scaffold0092 (1 HSPs)
scaffold0092 (270-378)||(8092-8202)
[»] scaffold0388 (1 HSPs)
scaffold0388 (259-369)||(5394-5506)
[»] scaffold0273 (1 HSPs)
scaffold0273 (271-317)||(5700-5746)
[»] scaffold1050 (1 HSPs)
scaffold1050 (40-106)||(1422-1488)
[»] scaffold0023 (1 HSPs)
scaffold0023 (49-78)||(103896-103925)


Alignment Details
Target: chr1 (Bit Score: 416; Significance: 0; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 416; E-Value: 0
Query Start/End: Original strand, 14 - 437
Target Start/End: Original strand, 26279766 - 26280189
Alignment:
Q  14 agacaaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaagagagagta 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  26279766 agacaaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaagagagggta 26279865  T
Q  114 tgaagactgccagagtctggagaccataagaagctgacgtcatcaagcgtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagct 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26279866 tgaagactgccagagtctggagaccataagaagctgacgtcatcaagcgtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagct 26279965  T
Q  214 acagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgc 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26279966 acagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctggagcaacgactatttcagatgaattagaagtcattggatgc 26280065  T
Q  314 ttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactccgttactccactcttcatgtctgcaatagtattgatatagttgtg 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26280066 ttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactccgttactccactcttcatgtctgcaatagtattgatatagttgtg 26280165  T
Q  414 tctacgctggtgaattgtccaaac 437  Q
    ||||||||||||||||||||||||    
T  26280166 tctacgctggtgaattgtccaaac 26280189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 14 - 399
Target Start/End: Original strand, 18516879 - 18517254
Alignment:
Q  14 agacaaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagt-tactaaaggaagcttatgttgcaagagagagt 112  Q
    |||||||||||||| |||| |||| |||||||||||| || ||||||||||||||||||||  ||   ||| |||| |||||||||||||||||||||||    
T  18516879 agacaaaaatttattagtc-ttaaattcaagtattggctccgaaagaacaaaagagagcaatagaaactacaaaag-aagcttatgttgcaagagagagt 18516976  T
Q  113 atgaagactgccagagtctggagaccataagaagctgacgtcatcaa-gcgtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaag 211  Q
     |||||||   ||||  ||||   |||   ||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  18516977 ctgaagaccatcagaagctggctgcca---gaagctgacgtcatcaaagagtctgaagatcatcagaagttgaagttcatcagagtctgaagactggaag 18517073  T
Q  212 ctacagttagttaaa-ttttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattgga 310  Q
    || |||||||||||| |||| ||||| ||||||||||||| |  |||||||||||||||||| |||||||||||||||| | |||||||||| |||||||    
T  18517074 ctgcagttagttaaagtttttttattctgaagacacatcattacagaaggaatagaagcctggagcaacgactatttcaaaggaattagaaggcattgga 18517173  T
Q  311 tgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactccgttactccactcttcatgtctgcaatagta 399  Q
    ||||||  |||||||||| ||| |||||||||||||||||||||||||||||        |||||||||||||||||||| ||||||||    
T  18517174 tgcttaatcattgaagagcgcaagaaaaggacatagtacaattgtacaacca--------ttactccactcttcatgtctacaatagta 18517254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 14 - 399
Target Start/End: Original strand, 18129721 - 18130103
Alignment:
Q  14 agacaaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaagagaga--- 110  Q
    |||| |||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||   | ||   ||||||| ||| ||||||||||  ||       
T  18129721 agactaaaatttataagtctttaatt-caagtattggttctgaaagaacaaatgagagcaatgaaattttcaaaggaaccttgtgttgcaagattgaaga 18129819  T
Q  111 ----gtatgaagactgccagagtctggagaccataagaagctgacgtcatca-agcgtctgaagatcatcagaagctgaagttcatcagagtctgaagac 205  Q
        || | |||||  | |||||||| ||||||| |||| |||||||||||| || ||||||||| | |||||||||||||||||||||||||||||| |    
T  18129820 catagtctaaagacaac-agagtctgaagaccatcagaaactgacgtcatcagagagtctgaagagcctcagaagctgaagttcatcagagtctgaagtc 18129918  T
Q  206 tagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtca 305  Q
    | ||||||  |||||||||||  |||||||| ||||||||| ||| || |||||||||| ||||||| || || | |||||||||| ||||||||||  |    
T  18129919 tggaagctgaagttagttaaaagttgttattctgaagacacgtcattgcagaaggaataaaagcctggagtaagg-ctatttcagaggaattagaaggta 18130017  T
Q  306 ttggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactccgttactccactcttcatgtctgcaatagta 399  Q
    ||||||||||||||| ||||||| | |||||||||||| |||||||||||||||||||        ||||||||||||||||||||||||||||    
T  18130018 ttggatgcttatccactgaagagcgtatgaaaaggacacagtacaattgtacaaccac--------tactccactcttcatgtctgcaatagta 18130103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 177 - 366
Target Start/End: Complemental strand, 23054577 - 23054388
Alignment:
Q  177 gaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagc 276  Q
    |||||| ||| ||||||||  ||||||||| ||||||  ||| |||||||| |||| |||||||   ||||||| || |||||||||||||||||| |||    
T  23054577 gaagctaaagatcatcagaagctgaagactggaagctgaagtcagttaaatgttgtcattttgattgcacatcattgcagaaggaatagaagcctggagc 23054478  T
Q  277 aacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactac 366  Q
    |||||||||||||||  ||||||||| ||||||||| ||||||| ||||||| ||| |||||||||||||||||||||||||||||||||    
T  23054477 aacgactatttcagagaaattagaaggcattggatgtttatccaatgaagagcgcaggaaaaggacatagtacaattgtacaaccactac 23054388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 188 - 369
Target Start/End: Original strand, 21683075 - 21683255
Alignment:
Q  188 tcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactattt 287  Q
    |||||| ||||||||| | |||||||  | ||| ||||| || ||||||| |||||||||  | || |||||||||||||| ||||||||||||||||||    
T  21683075 tcatcatagtctgaagtcaagaagctggacttaattaaagttggttattt-gaagacacaagattgcagaaggaatagaagtctgaagcaacgactattt 21683173  T
Q  288 cagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactcc 369  Q
    || | |||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  21683174 caaaggaattagaaggcattggatgcttatccagtgaagagcgcaggaaaaggacatagtacaattgtataaccactactcc 21683255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 142 - 364
Target Start/End: Complemental strand, 9346998 - 9346778
Alignment:
Q  142 agaagctgacgtcatca-agcgtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttga 240  Q
    ||||||||||||| ||| || ||||||||| | || |||||||||||||| ||||||||||||||| ||||||  | |||||||||  |||||||| |||    
T  9346998 agaagctgacgtcgtcagagagtctgaagagcctcggaagctgaagttcaacagagtctgaagactggaagctggacttagttaaaagttgttattctga 9346899  T
Q  241 agacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaagg 340  Q
    |  || |||| || ||||| ||| |||||||| |||||||||||||||| |  ||||||||| ||||||||||||||||| | ||||| |||| ||||||    
T  9346898 attcatatcattgcagaagaaatggaagcctggagcaacgactatttcaaa--aattagaaggcattggatgcttatccactaaagagcgcat-aaaagg 9346802  T
Q  341 acatagtacaattgtacaaccact 364  Q
    ||| ||||||||||||||||||||    
T  9346801 acacagtacaattgtacaaccact 9346778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 142 - 369
Target Start/End: Complemental strand, 16870208 - 16869981
Alignment:
Q  142 agaagctgacgtcatcaagcgtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaa 241  Q
    ||||| ||||||||||| |  |||||||| | |||||||||| |||| ||||||||||||||||| ||||||  |||||||||||  || ||||| ||||    
T  16870208 agaagttgacgtcatca-gaatctgaagaacctcagaagctggagtttatcagagtctgaagactggaagctgaagttagttaaaagttattattctgaa 16870110  T
Q  242 gacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatg-aaaagg 340  Q
      || |||| || |||| ||||  ||||||| |||||   |||||||||| |||||||||| ||||||||||||||||| | ||||| ||| | ||||||    
T  16870109 tgcatatcattgcagaatgaatgaaagcctggagcaattgctatttcagaggaattagaaggcattggatgcttatccactaaagagcgcaggaaaaagg 16870010  T
Q  341 acatagtacaattgtacaaccactactcc 369  Q
    |||||||||||||||||||||| ||||||    
T  16870009 acatagtacaattgtacaaccattactcc 16869981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 257 - 363
Target Start/End: Original strand, 20109897 - 20110003
Alignment:
Q  257 aaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgta 356  Q
    ||||||||||||| || |||||||||||||| | | |||||||||| |||||||| || ||| ||||||||||||| |||||||||||||||||||||||    
T  20109897 aaggaatagaagcatggagcaacgactattttaaaggaattagaaggcattggatactcatctattgaagagtgcaagaaaaggacatagtacaattgta 20109996  T
Q  357 caaccac 363  Q
    |||||||    
T  20109997 caaccac 20110003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 171 - 437
Target Start/End: Complemental strand, 26703771 - 26703505
Alignment:
Q  171 tcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcc 270  Q
    ||||||||  ||||||||||||||||| ||||| | |||||||  ||||||||||| || ||||||  |||||||||    || |||||||| |||||||    
T  26703771 tcatcagagtctgaagttcatcagagtttgaagtcaagaagctggagttagttaaagttggttattg-gaagacacaagtttgcagaaggaacagaagcc 26703673  T
Q  271 tgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaagga-catagtacaattgtacaaccactactcc 369  Q
    || | | | | ||||||||||  ||||||||| ||||| ||||||||||| ||||||| |||  |||||||  ||| |||| ||||||||||| ||||||    
T  26703672 tggaacgatggctatttcagagaaattagaagacattgtatgcttatccactgaagagcgcagaaaaaggataatactacatttgtacaaccattactcc 26703573  T
Q  370 gttactccactcttcatgtctgca-atagtattgatatagttgtgtctacgctggtgaattgtccaaac 437  Q
      || ||||||  ||||||||||| ||||||||| || ||||||| |||| ||||| |||| |||||||    
T  26703572 actattccact-atcatgtctgcacatagtattgctacagttgtgcctacactggttaattctccaaac 26703505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 255 - 353
Target Start/End: Original strand, 1090490 - 1090590
Alignment:
Q  255 agaaggaatagaagcctgaag-caacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatg-aaaaggacatagtacaat 352  Q
    ||||||||| |||||| | || ||||| ||| ||||||| |||| |||| ||||||||||||||||| | ||||| ||||| ||||||||||||||||||    
T  1090490 agaaggaatggaagcccggaggcaacggctaattcagataaatttgaaggcattggatgcttatccactaaagagcgcatgcaaaaggacatagtacaat 1090589  T
Q  353 t 353  Q
    |    
T  1090590 t 1090590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 365
Target Start/End: Complemental strand, 20909548 - 20909429
Alignment:
Q  247 atcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-ata 345  Q
    |||| ||||||||||||||||||||| ||||||||| |||||||| || || |||| |||| ||||||||| | | | |||| |   ||||||||| |||    
T  20909548 atcattgtagaaggaatagaagcctggagcaacgacgatttcagaggatttggaagacattagatgcttattcttggcagagcgttggaaaaggacaata 20909449  T
Q  346 gtacaattgtacaaccacta 365  Q
    ||||| || |||||||||||    
T  20909448 gtacatttctacaaccacta 20909429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 318
Target Start/End: Original strand, 16478658 - 16478739
Alignment:
Q  237 ttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatc 318  Q
    |||||||||||  | || ||||| |||| || |||| ||||||||||||||||||  ||||||||| |||||||||||||||    
T  16478658 ttgaagacacaagattgcagaagaaatataaacctggagcaacgactatttcagagaaattagaaggcattggatgcttatc 16478739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 16478453 - 16478516
Alignment:
Q  14 agacaaaaatttataagtccttaatttcaa-gtattggttctgaaagaacaaaagagagcaaatga 78  Q
    ||||||||||||||||||||||||   ||| |||||||||||| ||||||||| ||||||||||||    
T  16478453 agacaaaaatttataagtccttaa--acaaggtattggttctggaagaacaaatgagagcaaatga 16478516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 31359443 - 31359377
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccat 321  Q
    |||||||||||||| |||| ||||| | |||||| || |||||||||| | ||||||||||||||||    
T  31359443 agaaggaatagaagactgatgcaacaaatatttctgaagaattagaaggctttggatgcttatccat 31359377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 9347114 - 9347036
Alignment:
Q  40 tcaagtattggttctgaaagaacaaaagagagcaaatgagt-tactaaaggaagcttatgttgcaagagagagtatgaag 118  Q
    ||||| ||||||||||| |||||||||||||| ||| || | ||| ||||||||||| |||||||||| ||||| |||||    
T  9347114 tcaagcattggttctgatagaacaaaagagagtaaaagaatctac-aaaggaagcttgtgttgcaagacagagtctgaag 9347036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 70
Target Start/End: Original strand, 21682947 - 21682975
Alignment:
Q  42 aagtattggttctgaaagaacaaaagaga 70  Q
    |||||||||||||||||||||||||||||    
T  21682947 aagtattggttctgaaagaacaaaagaga 21682975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 1e-79; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 14 - 369
Target Start/End: Complemental strand, 20969580 - 20969212
Alignment:
Q  14 agacaaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaagagagagta 113  Q
    |||||| |||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||  || ||   ||||||| ||| ||||| |||| | |||     
T  20969580 agacaagaatttataagtc-ttaaattcaagtattgtttctgaaagaacaaatgagagcaatggaatttacaaaggaaacttgtgttgtaagacatagtc 20969482  T
Q  114 tgaagactgccagagtctggagaccataagaagctgac--------------gtcatcaagcgtctgaagatcatcagaagctgaagttcatcagagtct 199  Q
    | |||||  |||||| ||| ||||||| ||||||||||              ||||||||||||||||||||| |||||||||||||||| ||| |||||    
T  20969481 ttaagaccaccagaggctgaagaccattagaagctgactgcctgaagttgacgtcatcaagcgtctgaagatcctcagaagctgaagttcttcaaagtct 20969382  T
Q  200 gaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattag 299  Q
    ||||||| ||||||  |||||||||||  |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||| ||| |||||||    
T  20969381 gaagactggaagctgtagttagttaaagcttgttattttgaagacacatcactgtagaaggaatagaagcctacatcaacgactatttaagaggaattag 20969282  T
Q  300 aagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactcc 369  Q
    ||  ||||||||||||||||| | ||||||||| |||| |||||||||||||||||||||||||||||||    
T  20969281 aaagcattggatgcttatccacttaagagtgcaggaaagggacatagtacaattgtacaaccactactcc 20969212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 45 - 369
Target Start/End: Original strand, 31588818 - 31589139
Alignment:
Q  45 tattggttctgaaagaacaaaagagagcaaatgag-ttactaaaggaagcttatgttgcaagagagagtatgaagactgccagagtctggagaccataag 143  Q
    |||||||  |||||||||||||||||||||| ||  |||| |||| ||||||||||||||||| ||||| | ||||||  ||||||||| ||||||| ||    
T  31588818 tattggtattgaaagaacaaaagagagcaaaagaacttacaaaag-aagcttatgttgcaagacagagtctaaagactatcagagtctgaagaccatcag 31588916  T
Q  144 aagctgacgtcatcaagcgtctgaagatcatca-gaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaag 242  Q
     |||||||  |   ||||   ||| | |||||| | | |||||| |||||||||||||||||||||||| | |||||| ||||| ||||||||| |||||    
T  31588917 gagctgactgccagaagc---tgacg-tcatcaagtatctgaagatcatcagagtctgaagactagaagttgcagttaattaaagtttgttattctgaag 31589012  T
Q  243 acacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac 342  Q
    |||||||| || |||||||||||||||||| ||||||  ||| |||||| |||||| ||| |||||||||| |||||| ||||||  ||| |||||||||    
T  31589013 acacatcattgcagaaggaatagaagcctggagcaacagctaattcagaggaattaaaaggcattggatgcgtatccactgaagaacgcaggaaaaggac 31589112  T
Q  343 atagtacaattgtacaaccactactcc 369  Q
    |||||||||||||||||||||||||||    
T  31589113 atagtacaattgtacaaccactactcc 31589139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 142 - 393
Target Start/End: Original strand, 26119723 - 26119976
Alignment:
Q  142 agaagctgacgtcatca-agcgtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttga 240  Q
    ||||||||||||||||| || ||||||||| | ||| |||||| | ||||||| |||||||| ||| ||||||  |||||||||| | ||||||||||||    
T  26119723 agaagctgacgtcatcagagagtctgaagagcctcaaaagctggatttcatcatagtctgaaaactggaagctgaagttagttaactgttgttattttga 26119822  T
Q  241 agacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaagg 340  Q
    |  || |||| || | ||||||| |||||||| |||||||||||||| ||| |||||||||| ||||||||||||||||| ||||||| ||| ||||| |    
T  26119823 atgcatatcattgcaaaaggaatggaagcctggagcaacgactattttagaggaattagaaggcattggatgcttatccactgaagagcgcaagaaaaag 26119922  T
Q  341 acatagtacaattgtacaaccacta-ctccgttactccactcttcatgtctgca 393  Q
    ||||||||||||||||||||||||| ||||  |||||||||| |||||| ||||    
T  26119923 acatagtacaattgtacaaccactacctccactactccactcctcatgtttgca 26119976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 5 - 368
Target Start/End: Complemental strand, 13692780 - 13692435
Alignment:
Q  5 gaggagcacagacaaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaa 104  Q
    ||||| || ||||||||| ||||||||| |  | ||||||||||||||||||||||||| ||||||||||   | ||   ||||||| ||||||||||||    
T  13692780 gaggaccatagacaaaaaattataagtcttagaattcaagtattggttctgaaagaacataagagagcaatgaaatttacaaaggaaacttatgttgcaa 13692681  T
Q  105 gagagagtatgaagactgccagagtctggagaccataagaagctgacgtcatcaagcgtctgaagatcatcagaagctgaagttcatcagagtctgaaga 204  Q
    || ||||| ||||||||   |||||||| ||||||| ||||| |||| ||||||||||| |||||                 |||||||||||||||| |    
T  13692680 gacagagtctgaagactagtagagtctgaagaccatcagaagatgacatcatcaagcgtatgaag-----------------ttcatcagagtctgaata 13692598  T
Q  205 ctagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtc 304  Q
    ||  ||||| |||||||||||| ||||||| | |||||| |||||| || |||||||||||||||||  ||||| |||||||| ||| |||||||||| |    
T  13692597 ctgaaagctgcagttagttaaaatttgttactatgaagatacatcattgcagaaggaatagaagcctcgagcaatgactattttagaggaattagaagac 13692498  T
Q  305 attggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactc 368  Q
    |||| |||||||||||  ||||||  || |||||||||||||||||||| ||||||||||||||    
T  13692497 attgaatgcttatccacagaagagcaca-gaaaaggacatagtacaattatacaaccactactc 13692435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 189 - 374
Target Start/End: Complemental strand, 27057510 - 27057325
Alignment:
Q  189 catcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttc 288  Q
    ||||||||||||||| | || || |  ||||||||||| ||||||||| ||||||||||||| || |||||||||| ||| ||  ||||| |||||||||    
T  27057510 catcagagtctgaagccaaggagatgtagttagttaaagtttgttattctgaagacacatcattgcagaaggaataaaagactagagcaatgactatttc 27057411  T
Q  289 agatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactccgttac 374  Q
    ||| |||||||||| |||||||||  |||||| ||||||| |||  ||||||||||| ||||||||||||||||||||||| ||||    
T  27057410 agaggaattagaaggcattggatgactatccactgaagagcgcaaaaaaaggacataatacaattgtacaaccactactccattac 27057325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 176 - 399
Target Start/End: Complemental strand, 23589921 - 23589697
Alignment:
Q  176 agaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaag 275  Q
    ||||| || |||| ||||||  ||||||||| ||||||  |||||||||||| |||||||| ||||  || || | || ||||||||| || ||||| ||    
T  23589921 agaagttggagtttatcagaagctgaagactggaagctgaagttagttaaatgttgttattctgaatgcatatgattgcagaaggaatggatgcctggag 23589822  T
Q  276 caacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactac-tccgttac 374  Q
    |||||||||||||||| |||||||||| ||||||||| ||||||| | |||||   | ||||||||||||||||||||||||||||||||| |||  |||    
T  23589821 caacgactatttcagaggaattagaaggcattggatggttatccactaaagagcataggaaaaggacatagtacaattgtacaaccactacatccactac 23589722  T
Q  375 tccactcttcatgtctgcaatagta 399  Q
    ||||||| |  ||||| ||||||||    
T  23589721 tccactcattgtgtctacaatagta 23589697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 218 - 369
Target Start/End: Original strand, 39798857 - 39799008
Alignment:
Q  218 ttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttat 317  Q
    ||||||||| ||||||||| ||||||||||| | || |||||||||| ||| ||| ||||||||||||||||||  ||||||||  ||||||||||||||    
T  39798857 ttagttaaagtttgttattctgaagacacataattgcagaaggaataaaaggctggagcaacgactatttcagagaaattagaaagcattggatgcttat 39798956  T
Q  318 ccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactcc 369  Q
     || | ||||| |||  ||| ||||||||| |||||||||||||||||||||    
T  39798957 tcacttaagagcgcagaaaagggacatagtgcaattgtacaaccactactcc 39799008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 257 - 369
Target Start/End: Original strand, 17262747 - 17262860
Alignment:
Q  257 aaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaattgt 355  Q
    |||||||||||||||| ||||| |||||||||||| |||| ||||| ||||||||||||||||| ||||||| ||| | ||||||| |||||||||||||    
T  17262747 aaggaatagaagcctggagcaatgactatttcagaggaatgagaaggcattggatgcttatccactgaagagcgcaggtaaaggacaatagtacaattgt 17262846  T
Q  356 acaaccactactcc 369  Q
    ||||||||||||||    
T  17262847 acaaccactactcc 17262860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 22585976 - 22586122
Alignment:
Q  218 ttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttat 317  Q
    ||||||||| || |||||||||||||||||  || | |||||||||||||||||| |||||||||||||| ||| || | ||||| ||||| ||||||||    
T  22585976 ttagttaaagttggttattttgaagacacaagacagcagaaggaatagaagcctggagcaacgactattttagaagactaagaaggcattgaatgcttat 22586075  T
Q  318 ccattgaagagtgcatgaaaaggaca-tagtacaattgtacaaccac 363  Q
    ||| | ||||| | | |||||||||| ||||| |||| |||||||||    
T  22586076 ccactaaagagcgtaggaaaaggacagtagtataattttacaaccac 22586122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 257 - 369
Target Start/End: Complemental strand, 34638575 - 34638463
Alignment:
Q  257 aaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggaca-tagtacaattgt 355  Q
    ||||||| |||||||| ||||||| ||| |||||| ||||| |||| ||||||||| ||||||| ||||||| ||| |||||||||| |||| |||||||    
T  34638575 aaggaatggaagcctggagcaacggctaattcagaggaatttgaaggcattggatgtttatccactgaagagcgca-gaaaaggacaatagtgcaattgt 34638477  T
Q  356 acaaccactactcc 369  Q
    ||||||||||||||    
T  34638476 acaaccactactcc 34638463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 198 - 369
Target Start/End: Complemental strand, 20567988 - 20567817
Alignment:
Q  198 ctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaatt 297  Q
    ||||||||| ||||||  |||||||||||| |||||||| | | | |  || | || |||||||||  || |||| ||||||||||| |||||| |||||    
T  20567988 ctgaagactggaagctgaagttagttaaatgttgttattctaatg-cttatgattgcagaaggaatgcaatcctggagcaacgactacttcagaggaatt 20567890  T
Q  298 agaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaattgtacaaccactactcc 369  Q
     |||| ||||||||||||||| | ||| ||| ||  ||||||||| |||||||||||||||||||||||||||    
T  20567889 tgaaggcattggatgcttatcgactgatgagcgctagaaaaggacaatagtacaattgtacaaccactactcc 20567817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 255 - 369
Target Start/End: Original strand, 27276156 - 27276273
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgca-tga-aaaggac-atagtacaa 351  Q
    ||||||||||||||| |||| |||| | ||||||||| |||||||||| ||||| ||||||||||| |||||| ||||  || ||||||| |||||||||    
T  27276156 agaaggaatagaagcgtgaaacaacaattatttcagaggaattagaaggcattgaatgcttatccactgaagaatgcacagagaaaggacaatagtacaa 27276255  T
Q  352 ttgtacaaccactactcc 369  Q
    ||||||||||||| ||||    
T  27276256 ttgtacaaccacttctcc 27276273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 257 - 319
Target Start/End: Original strand, 20237397 - 20237459
Alignment:
Q  257 aaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatcc 319  Q
    |||||||||||||||  |||||||||||||||||| |||||||||| |||| |||||||||||    
T  20237397 aaggaatagaagccttgagcaacgactatttcagaggaattagaaggcatttgatgcttatcc 20237459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 365
Target Start/End: Original strand, 2152918 - 2153029
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaatt 353  Q
    |||||||||||||||||| |||||| ||||||||||| ||||| |||| ||||| |||||||| ||  |||||  |   ||||||||| |||||| | ||    
T  2152918 agaaggaatagaagcctggagcaacaactatttcagaagaattggaagacattgaatgcttattcacagaagaacgttagaaaaggacaatagtatagtt 2153017  T
Q  354 gtacaaccacta 365  Q
    ||||||||||||    
T  2153018 gtacaaccacta 2153029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 27057638 - 27057559
Alignment:
Q  41 caagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaagagagagtatgaagac 120  Q
    |||||||||||| |||| ||||||||||||||||   | |||  |||||||||||||||||||||| ||||| |||||||    
T  27057638 caagtattggttttgaaggaacaaaagagagcaatgaaattagcaaaggaagcttatgttgcaagacagagtctgaagac 27057559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 365
Target Start/End: Complemental strand, 16607638 - 16607532
Alignment:
Q  260 gaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaattgtaca 358  Q
    ||||||||||||| ||||||| ||| |||||| ||||| |||| ||||||| |||||| | ||| |||  |   ||||||||| ||||||||| ||||||    
T  16607638 gaatagaagcctggagcaacggctaattcagaggaatttgaaggcattggaagcttattctttggagaacgttggaaaaggacaatagtacaagtgtaca 16607539  T
Q  359 accacta 365  Q
    |||||||    
T  16607538 accacta 16607532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 34637645 - 34637580
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatcca 320  Q
    ||||||||||||| |||  ||| |||||||||| ||| |||||| ||| |||||||||||||||||    
T  34637645 agaaggaatagaatcctagagcgacgactattttagaggaattaaaaggcattggatgcttatcca 34637580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 77
Target Start/End: Original strand, 7745435 - 7745463
Alignment:
Q  49 ggttctgaaagaacaaaagagagcaaatg 77  Q
    |||||||||||||||||||||||||||||    
T  7745435 ggttctgaaagaacaaaagagagcaaatg 7745463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 18672491 - 18672546
Alignment:
Q  18 aaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaa 74  Q
    ||||||||||||||| ||||||  | | |||||||||||||||||||| ||||||||    
T  18672491 aaaaatttataagtctttaatta-aggaattggttctgaaagaacaaatgagagcaa 18672546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 136; Significance: 9e-71; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 14 - 369
Target Start/End: Complemental strand, 12194263 - 12193914
Alignment:
Q  14 agacaaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaagagagagta 113  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||  || ||   ||||||||||| |||||||||| ||        
T  12194263 agacaaaaatttacaagtcattaatttcaagtattgattctgaatgaacaaaagagagcaatggaatttacaaaggaagcttgtgttgcaagacagc--- 12194167  T
Q  114 tgaagactgccagagtctggagaccataagaagctgacgtcatcaagcgtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagct 213  Q
    ||| |||   ||||  |||    ||| |||   |||||||||||| || | |||||||| |||||||||||||||||||||||| |||||||| ||| ||    
T  12194166 tgaggaccatcagaagctgactgccaaaag---ctgacgtcatcaggcatatgaagatcctcagaagctgaagttcatcagagtttgaagactggaaact 12194070  T
Q  214 acagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgc 313  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||| |||||||||||||| | |||| ||||||||||| ||||| |||| ||||||||||    
T  12194069 acagttagttaaagtttgttattctgaagacacatcattgtagagggaatagaagcctggaacaacaactatttcagaagaattggaaggcattggatgc 12193970  T
Q  314 ttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactcc 369  Q
    || |||||||||||| ||| ||||| |||| |||||| |||||||||||| |||||    
T  12193969 ttgtccattgaagagcgcaggaaaatgacaaagtacagttgtacaaccacaactcc 12193914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 14 - 369
Target Start/End: Complemental strand, 12438691 - 12438342
Alignment:
Q  14 agacaaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaagagagagta 113  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||  || ||   ||||||||||| |||||||||| ||        
T  12438691 agacaaaaatttacaagtcattaatttcaagtattgattctgaatgaacaaaagagagcaatggaatttacaaaggaagcttgtgttgcaagacagc--- 12438595  T
Q  114 tgaagactgccagagtctggagaccataagaagctgacgtcatcaagcgtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagct 213  Q
    ||| |||   ||||  |||    ||| |||   |||||||||||| || | |||||||| |||||||||||||||||||||||| |||||||| ||| ||    
T  12438594 tgaggaccatcagaagctgactgccaaaag---ctgacgtcatcaggcatatgaagatcctcagaagctgaagttcatcagagtttgaagactggaaact 12438498  T
Q  214 acagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgc 313  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||| |||||||||||||| | |||| ||||||||||| ||||| |||| ||||||||||    
T  12438497 acagttagttaaagtttgttattctgaagacacatcattgtagagggaatagaagcctggaacaacaactatttcagaagaattggaaggcattggatgc 12438398  T
Q  314 ttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactcc 369  Q
    || |||||||||||| ||| ||||| |||| |||||| |||||||||||| |||||    
T  12438397 ttgtccattgaagagcgcaggaaaatgacaaagtacagttgtacaaccacaactcc 12438342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 142 - 393
Target Start/End: Original strand, 17916735 - 17916988
Alignment:
Q  142 agaagctgacgtcatca-agcgtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttga 240  Q
    ||||||||||||||||| || |||| |||| | |||||||||| |||||||||||||||||||| | |||| |  | |||||||||  |||||||| | |    
T  17916735 agaagctgacgtcatcagagagtctaaagaccgtcagaagctggagttcatcagagtctgaagattggaagttggaattagttaaaagttgttattctta 17916834  T
Q  241 agacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaagg 340  Q
    |   | |||| || ||||||||| |||||||| |||||||||||||| ||| |||||||||| ||||||| ||||||||| | |||||  || ||||| |    
T  17916835 atgtaaatcattgcagaaggaatggaagcctggagcaacgactattttagaggaattagaaggcattggaagcttatccactaaagagcacaggaaaatg 17916934  T
Q  341 acatagtacaattgtacaaccact-actccgttactccactcttcatgtctgca 393  Q
    ||||||||||||||||||| ||||  ||||  |||||||||| || ||||||||    
T  17916935 acatagtacaattgtacaatcactgcctccactactccactcctcttgtctgca 17916988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 198 - 398
Target Start/End: Complemental strand, 18558203 - 18558002
Alignment:
Q  198 ctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaatt 297  Q
    ||||||||| ||||||  |||||||||||| | ||  ||||||   ||||||| || |||||||||| ||||||  |||||||||||| |||||  ||||    
T  18558203 ctgaagactggaagctgaagttagttaaatatcgtccttttgattgcacatcattgcagaaggaatataagcctagagcaacgactatatcagagaaatt 18558104  T
Q  298 agaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccacta-ctccgttactccactcttcatgtctgcaata 396  Q
    ||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| || ||||  || ||||||| | ||||||||||||    
T  18558103 agaaggcattggatgtttatccactgaagagtgcaggaaaaggacatagtacaattgtacaaccaatatctccactattccactccttatgtctgcaata 18558004  T
Q  397 gt 398  Q
    ||    
T  18558003 gt 18558002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 181 - 429
Target Start/End: Original strand, 19505394 - 19505641
Alignment:
Q  181 ctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacg 280  Q
    ||||||||  ||||||||||||| | |||| ||  ||||||||||| || ||||||| |||||||||    || ||||||||||||| |||  |||||||    
T  19505394 ctgaagtttgtcagagtctgaagtcaagaacctggagttagttaaagttggttattt-gaagacacaagtttgcagaaggaatagaatcctcgagcaacg 19505492  T
Q  281 actatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaattgtacaaccactactccgttactccac 379  Q
     |||||||||| |||||||||| ||||| ||||||| ||| |  ||||  |||| ||||||| |||||||||||||||||||||||||||  ||||||||    
T  19505493 gctatttcagaggaattagaaggcattgaatgcttacccactatagagctcatg-aaaggacaatagtacaattgtacaaccactactccactactccac 19505591  T
Q  380 tcttcatgtctgca-atagtattgatatagttgtgtctacgctggtgaatt 429  Q
    | ||| |||||||| |||||| || || |||||||||||| ||||| ||||    
T  19505592 t-ttcttgtctgcatatagtactgctacagttgtgtctacactggttaatt 19505641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 192 - 312
Target Start/End: Original strand, 1208589 - 1208709
Alignment:
Q  192 cagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagc-aacgactatttcag 290  Q
    |||||||||||| | |||| ||  |||||||||||||| ||||||| |||||||||    |||||||||||||||||||||  || ||||||||||||||    
T  1208589 cagagtctgaagtcaagaacctggagttagttaaatttggttattt-gaagacacaagtttgtagaaggaatagaagcctggggccaacgactatttcag 1208687  T
Q  291 atgaattagaagtcattggatg 312  Q
    | ||||| |||| |||||||||    
T  1208688 aggaatttgaaggcattggatg 1208709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 255 - 369
Target Start/End: Complemental strand, 12541755 - 12541639
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgc-atga-aaagga-catagtacaa 351  Q
    ||||| |||||||||||| || ||||||||||| ||| |||||||||| ||||||||  |||||| |||||| | || | || ||||||  |||||||||    
T  12541755 agaagaaatagaagcctggagaaacgactattttagaggaattagaaggcattggatttttatcctttgaag-gagctaagagaaaggataatagtacaa 12541657  T
Q  352 ttgtacaaccactactcc 369  Q
    ||||||||||||||||||    
T  12541656 ttgtacaaccactactcc 12541639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 12541983 - 12541853
Alignment:
Q  19 aaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaagagagagtatgaag 118  Q
    |||||||||||||| ||||  | ||||| ||||||| |||||||||| |||||||||||| ||   |||||||||||| |||| |||  ||||| |||||    
T  12541983 aaaatttataagtctttaaact-aagtactggttctaaaagaacaaatgagagcaaatgaatttacaaaggaagcttaagttgtaagtcagagtctgaag 12541885  T
Q  119 actgccagagtctggagaccataagaagctgac 151  Q
    |    ||||||||| ||||||| ||||||||||    
T  12541884 a-aatcagagtctgaagaccatcagaagctgac 12541853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 369
Target Start/End: Original strand, 1209838 - 1209899
Alignment:
Q  309 gatgcttatccattgaagagtgcatgaaaaggaca-tagtacaattgtacaaccactactcc 369  Q
    |||||||||||| | ||||| ||| |||||||| | ||||||||||||||||||||| ||||    
T  1209838 gatgcttatccactaaagagcgcaggaaaaggataatagtacaattgtacaaccactgctcc 1209899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 135; Significance: 3e-70; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 14 - 369
Target Start/End: Complemental strand, 24399045 - 24398677
Alignment:
Q  14 agacaaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaagagagagta 113  Q
    |||||||||||||||| || |||| |||||||| ||||| |  ||||||||||||||||||   | |||  ||| |||||||||||||||||| | ||||    
T  24399045 agacaaaaatttataaatc-ttaaattcaagtaatggttttagaagaacaaaagagagcaatgaaattagaaaatgaagcttatgttgcaagacaaagta 24398947  T
Q  114 tgaagactgccagagtctggagaccataagaagc--------------tgacgtcatcaagcgtctgaagatcatcagaagctgaagttcatcagagtct 199  Q
    |||||||| | |||||||| ||||||| ||||||              ||| ||||||||||||||||||| |||||||  ||||||||||| |||||||    
T  24398946 tgaagactactagagtctgaagaccatcagaagcccactgctagagtctgaggtcatcaagcgtctgaagaccatcagagtctgaagttcattagagtct 24398847  T
Q  200 gaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattag 299  Q
    | ||   ||||||| |||||||||||| ||||||||| | ||||||||||| || |||||| ||||||||||| |||||||||||||| | | |||||||    
T  24398846 gtagttaagaagctgcagttagttaaagtttgttattctcaagacacatcattgcagaaggtatagaagcctggagcaacgactattttaaaggaattag 24398747  T
Q  300 aagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactcc 369  Q
    ||| ||||||||||||||||| ||| ||| |||||||||||| |||||||| ||||||||||||||||||    
T  24398746 aaggcattggatgcttatccactgatgagcgcatgaaaaggatatagtacagttgtacaaccactactcc 24398677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 46 - 399
Target Start/End: Original strand, 10704367 - 10704702
Alignment:
Q  46 attggttctgaaagaacaaaagagagcaaatg-agttactaaaggaagcttatgttgcaagagagagtatgaagactgccagagtctggagaccataaga 144  Q
    ||||||||| |||||||||||||||||||| | | |||| |||||||||| ||||| ||||| ||||| |||||||    |||||||| ||||||| |||    
T  10704367 attggttcttaaagaacaaaagagagcaaagggatttac-aaaggaagctaatgttccaagacagagtctgaagacaaagagagtctgaagaccatcaga 10704465  T
Q  145 agctgacgtcatca-agcgtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaaga 243  Q
    | |||||||||||| || |||||||||||  ||||||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||    
T  10704466 aactgacgtcatcagagagtctgaagatccccagaagctgaagttcatcaaagtctgaagactggaagctgcagttagttaaagtttgttattttgaaga 10704565  T
Q  244 cacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatg-aaaaggac 342  Q
    |            |||||||||||||||  |||||||||||||| | | |||||||||| ||||| |||||||||||  |||||| | | | |||||| |    
T  10704566 c------------aaggaatagaagcctagagcaacgactattttaaaggaattagaagacattgaatgcttatccaccgaagagcgtaggaaaaagggc 10704653  T
Q  343 atagtacaattgtacaaccactactccgttactccactcttcatgtctgcaatagta 399  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||    
T  10704654 atagtacaattgtacaaccac--------tactccactcttcatgtctgcaatagta 10704702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 142 - 368
Target Start/End: Complemental strand, 13145379 - 13145151
Alignment:
Q  142 agaagctgacgtcatcaagcgtctgaagatcatcagaagctgaagttcatcagagtctgaaga-ctagaagctacagttagttaaattttgttattttga 240  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||| || |||||| | |||| ||||| ||||||  | | |    
T  13145379 agaagctgacgtcatcaagcgtctaaagatcctcagaagctgaagttcattagagtctgaagaactggaagctgctgttacttaaagtttgtttctctaa 13145280  T
Q  241 agacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaagg 340  Q
    |||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||| | ||||| | | |||||||    
T  13145279 agacacatcattgcagaaggaatagaagcctgatgcaacgactatttcagatgaattagaaggcattgaatgcttatccactaaagagag-aagaaaagg 13145181  T
Q  341 ac--atagtacaattgtacaaccactactc 368  Q
    ||  ||||||||||||||||||||||||||    
T  13145180 acatatagtacaattgtacaaccactactc 13145151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 142 - 399
Target Start/End: Complemental strand, 23231428 - 23231174
Alignment:
Q  142 agaagctgacgtcatcaagcgtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaa 241  Q
    ||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||  || |  ||||||||||| ||||||||| | ||    
T  23231428 agaagctgacgtcatcaagcgtctgaagattctaagaagctgaagttcatcagagtctgaagactaatagttgtagttagttaaagtttgttattctaaa 23231329  T
Q  242 gacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaagga 341  Q
    |||| ||||| |||||| ||||| |||||||||||||    |||||||||  ||||||||| |||||||||||||||||  |||||| ||| ||||||||    
T  23231328 gacatatcaccgtagaatgaataaaagcctgaagcaattgatatttcagagaaattagaaggcattggatgcttatccacggaagagcgcaggaaaagga 23231229  T
Q  342 catagtacaattgtacaaccactactccgttactccactcttcatgtctgcaatagta 399  Q
    ||||||||||   | ||| || ||||||  ||||||| ||||||||||||||||||||    
T  23231228 catagtacaa---tccaatcaatactccactactccattcttcatgtctgcaatagta 23231174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 39 - 399
Target Start/End: Original strand, 24718538 - 24718903
Alignment:
Q  39 ttcaagtattggttctgaaagaacaaaagagagcaa-atgagttactaaa-ggaagcttatgttgcaagagagagtatgaagactgccagagtctggaga 136  Q
    ||||||||| ||||||| ||||||||| |||||||| |  | |||| ||| |||||||| |||||||||| |||||||||||||   ||  ||| | | |    
T  24718538 ttcaagtataggttctggaagaacaaatgagagcaataaaatttacaaaaaggaagcttgtgttgcaagatagagtatgaagacaaacaacgtcagaaaa 24718637  T
Q  137 ccataagaagctgacgtcatca-agcgtctgaagatc-atcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgtta 234  Q
    |||| ||||| ||||||||||| || ||||||||| | || |||||||| ||||||||||||||||||||||  |||||  |||||||||||| || ||     
T  24718638 ccatcagaagttgacgtcatcagagagtctgaagaaccattagaagctggagttcatcagagtctgaagactgtaagctgaagttagttaaatgttcttt 24718737  T
Q  235 ttttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatg 334  Q
    || ||||  || || | ||  || ||||| |||||||   ||| || |||||||| |  ||||||||| ||||||||||||||||| ||||||||||| |    
T  24718738 ttctgaatgcatatgattgctgatggaatggaagcctagtgcagcggctatttcaaaataattagaaggcattggatgcttatccactgaagagtgcagg 24718837  T
Q  335 aaaaggacatagtacaattgtacaaccacta-ctccgttactccactcttcatgtctgcaatagta 399  Q
    |||||||||||||||||||||||| |||||| ||||  |||||||||| |||||||||||||||||    
T  24718838 aaaaggacatagtacaattgtacagccactacctccactactccactcctcatgtctgcaatagta 24718903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 164 - 399
Target Start/End: Original strand, 16462575 - 16462811
Alignment:
Q  164 ctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaat 263  Q
    ||||||||||||||||  ||||| ||||||||   |||||| | ||||||  ||||||||||||||||||||| ||||   |||||| |  |||||||||    
T  16462575 ctgaagatcatcagaatttgaagatcatcagaagttgaagattggaagctgaagttagttaaattttgttattctgaatggacatcattacagaaggaat 16462674  T
Q  264 agaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccac 363  Q
    ||||||||| || |||| |||  ||||| ||||| |||| ||||||||||||||||| || |||| ||| ||||||||||||||||||||||||||||||    
T  16462675 agaagcctggagaaacggctaaatcagaggaatttgaaggcattggatgcttatccactggagagcgcaggaaaaggacatagtacaattgtacaaccac 16462774  T
Q  364 tac-tccgttactccactcttcatgtctgcaatagta 399  Q
    ||| |||  |||||||||| |||||||||||||||||    
T  16462775 tacatccaatactccactcctcatgtctgcaatagta 16462811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 172 - 366
Target Start/End: Original strand, 18171966 - 18172160
Alignment:
Q  172 catcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcct 271  Q
    ||||| |||||| ||||||| ||| |||| |||||  |||||  |||||||||||| |||||||| ||||  || || | || |||||| || |||||||    
T  18171966 catcaaaagctggagttcattagaatctggagactgaaagctgaagttagttaaatgttgttattctgaatgcatatgattgcagaaggtatggaagcct 18172065  T
Q  272 gaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactac 366  Q
      |||||||||||||||||| |||||||||| ||||  |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  18172066 agagcaacgactatttcagaggaattagaagacattaaatgcttatccattgaagactgcaggaaaaggacatagtacaattgtacaaccactac 18172160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 191 - 369
Target Start/End: Original strand, 23006008 - 23006186
Alignment:
Q  191 tcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcag 290  Q
    |||||||||  ||||||||||||  |||||||||||| |||||||| ||||  || || | || | |||| || |||||||  || ||||||||||||||    
T  23006008 tcagagtctagagactagaagctgaagttagttaaatgttgttattctgaatgcatatgattgcaaaaggtatggaagcctagaggaacgactatttcag 23006107  T
Q  291 atgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactcc 369  Q
    | |||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  23006108 aggaattagaaggcattagatgcttatccattgaagagtgcaagaaaaagacatagtacaattgtacaaccactactcc 23006186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 191 - 369
Target Start/End: Complemental strand, 23782358 - 23782180
Alignment:
Q  191 tcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcag 290  Q
    |||||||||  ||||||||||||  |||||||||||| |||||||| ||||  || || | || | |||| || |||||||  || ||||||||||||||    
T  23782358 tcagagtctagagactagaagctgaagttagttaaatgttgttattctgaatgcatatgattgcaaaaggtatggaagcctagaggaacgactatttcag 23782259  T
Q  291 atgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactcc 369  Q
    | |||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  23782258 aggaattagaaggcattagatgcttatccattgaagagtgcaagaaaaagacatagtacaattgtacaaccactactcc 23782180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 136 - 369
Target Start/End: Original strand, 24728460 - 24728685
Alignment:
Q  136 accataagaagctgacgtcatca-agcgtctgaagatc-atcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgtt 233  Q
    ||||| ||||| ||||||||||| || |||| |||| | ||||||||||| |||||||||||||||||||||| ||||||  |||||||||||| || ||    
T  24728460 accatcagaagttgacgtcatcagagagtctcaagaaccatcagaagctggagttcatcagagtctgaagactggaagctgaagttagttaaatgttctt 24728559  T
Q  234 attttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcat 333  Q
     || ||||          || ||||||||| ||| |||   |||| | |||||||||| |||||||||| ||||||||||||||||| |||||||||||     
T  24728560 tttctgaa----------tgcagaaggaatggaaacctagtgcaatggctatttcagaggaattagaaggcattggatgcttatccactgaagagtgcag 24728649  T
Q  334 gaaaaggacatagtacaattgtacaaccactactcc 369  Q
    ||||||||||||||||||||||||||||||||||||    
T  24728650 gaaaaggacatagtacaattgtacaaccactactcc 24728685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 171 - 366
Target Start/End: Original strand, 17445590 - 17445785
Alignment:
Q  171 tcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcc 270  Q
    |||||||||| ||| ||||||||||  || |||||| ||||||  |||||||||||| |||||||||||||  | ||||| || |||||||||   ||||    
T  17445590 tcatcagaagttgaggttcatcagaagctaaagactggaagctgaagttagttaaatgttgttattttgaatgctcatcattggagaaggaatgagagcc 17445689  T
Q  271 tgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactac 366  Q
    || |||||||||||||||||| |||||||||| ||||| ||||| ||||  |||||||||||  ||||  ||||| ||||||||||||| ||||||    
T  17445690 tggagcaacgactatttcagaggaattagaagacattgaatgctgatccgctgaagagtgcaaaaaaaatacataatacaattgtacaatcactac 17445785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 181 - 437
Target Start/End: Original strand, 31127284 - 31127540
Alignment:
Q  181 ctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacg 280  Q
    ||||| ||||||||||| ||||| | |||| ||  ||||||||||| || |||||||||||||||||| | || | |||||||||||||||| | |||||    
T  31127284 ctgaaattcatcagagtatgaagtcaagaatctggagttagttaaagttggttattttgaagacacatgattgcaaaaggaatagaagcctggaacaacg 31127383  T
Q  281 actatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaattgtacaaccactactccgttactccac 379  Q
      ||||||||| |||||| ||| ||||||||||||| ||| ||||||| ||||| |||| || |||||| |||||||||||||||  |||  || |||||    
T  31127384 tatatttcagaggaattataaggcattggatgcttaaccactgaagagcgcatg-aaagaacaatagtataattgtacaaccactgttccactattccac 31127482  T
Q  380 tcttcatgtctgca-atagtattgatatagttgtgtctacgctggtgaattgtccaaac 437  Q
    |  |||||| |||| |||||| || | ||| |||||||| |||||| |||| |||||||    
T  31127483 t-atcatgtatgcacatagtactgctctagctgtgtctatgctggttaattctccaaac 31127540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 257 - 437
Target Start/End: Complemental strand, 26185842 - 26185662
Alignment:
Q  257 aaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaattgt 355  Q
    |||||||||||  ||| | ||||| ||||||||||||||||||||| |||| |||||||||||| | |||||||||  |||||||| ||||||| |||||    
T  26185842 aaggaatagaaatctggaacaacggctatttcagatgaattagaaggcattagatgcttatccactaaagagtgcagaaaaaggacaatagtac-attgt 26185744  T
Q  356 acaaccactactccgttactccactcttcatgtctgca-atagtattgatatagttgtgtctacgctggtgaattgtccaaac 437  Q
    |||||||||| |||  || ||||||   |||||||||| ||| || || ||||||||||||||||||||| |||| |||||||    
T  26185743 acaaccactattccactattccact-accatgtctgcacataatactgctatagttgtgtctacgctggttaattctccaaac 26185662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 255 - 365
Target Start/End: Complemental strand, 25930608 - 25930497
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaagga-catagtacaatt 353  Q
    |||||||||||||||||| ||||||| ||| |||||| ||||| ||||||||||||||||||| | |||||||| |   ||||||||  |||||||||||    
T  25930608 agaaggaatagaagcctggagcaacggctaattcagaggaatttgaagtcattggatgcttattccttgaagagcgttggaaaaggataatagtacaatt 25930509  T
Q  354 gtacaaccacta 365  Q
    ||||||||||||    
T  25930508 gtacaaccacta 25930497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 255 - 369
Target Start/End: Complemental strand, 32335954 - 32335839
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaatt 353  Q
    ||||||||| |||||||| |||||||||||||||||| ||||| ||||  ||| |||||||||||| |||||||  |  ||| ||||| |||||||||||    
T  32335954 agaaggaatggaagcctggagcaacgactatttcagaagaatttgaagggattagatgcttatccactgaagagctctggaataggacgatagtacaatt 32335855  T
Q  354 gtacaaccactactcc 369  Q
    ||||||||||||||||    
T  32335854 gtacaaccactactcc 32335839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 255 - 366
Target Start/End: Original strand, 18026782 - 18026895
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaaga-gtgcatgaaaaggac-atagtacaat 352  Q
    ||||||| |||||||||| |||||| ||||||||||| |||||||||| ||||||||||||||||| |||||| |  ||   ||||||| ||||||||||    
T  18026782 agaaggagtagaagcctggagcaacaactatttcagaggaattagaaggcattggatgcttatccactgaagatggacaaagaaaggacaatagtacaat 18026881  T
Q  353 tgtacaaccactac 366  Q
    ||||||||||||||    
T  18026882 tgtacaaccactac 18026895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 172 - 272
Target Start/End: Original strand, 14325309 - 14325409
Alignment:
Q  172 catcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcct 271  Q
    ||||||||||| |||||||||| |||||||||||||||||||  |||||||||||| |||||||| |||| ||| || | || |||| |||| |||||||    
T  14325309 catcagaagctaaagttcatcaaagtctgaagactagaagctgaagttagttaaatgttgttattctgaatacatatgattgcagaatgaatggaagcct 14325408  T
Q  272 g 272  Q
    |    
T  14325409 g 14325409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 172 - 272
Target Start/End: Original strand, 14418319 - 14418419
Alignment:
Q  172 catcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcct 271  Q
    ||||||||||| |||||||||| |||||||||||||||||||  |||||||||||| |||||||| |||| ||| || | || |||| |||| |||||||    
T  14418319 catcagaagctaaagttcatcaaagtctgaagactagaagctgaagttagttaaatgttgttattctgaatacatatgattgcagaatgaatggaagcct 14418418  T
Q  272 g 272  Q
    |    
T  14418419 g 14418419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 293 - 369
Target Start/End: Complemental strand, 17867659 - 17867583
Alignment:
Q  293 gaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactcc 369  Q
    |||||||||| ||||||||||||||||| ||||||| ||| | |||||||||||||||||||| |||| ||||||||    
T  17867659 gaattagaaggcattggatgcttatccactgaagagcgcagggaaaggacatagtacaattgtgcaactactactcc 17867583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 293 - 369
Target Start/End: Complemental strand, 17877442 - 17877366
Alignment:
Q  293 gaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactcc 369  Q
    |||||||||| ||||||||||||||||| ||||||| ||| | |||||||||||||||||||| |||| ||||||||    
T  17877442 gaattagaaggcattggatgcttatccactgaagagcgcagggaaaggacatagtacaattgtgcaactactactcc 17877366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 257 - 392
Target Start/End: Original strand, 30451553 - 30451689
Alignment:
Q  257 aaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaattgt 355  Q
    ||||||| ||||||||||| ||||  ||||||| |  |||| |||| ||||||||||||||||| ||||||| |||  ||||| || ||||||||||| |    
T  30451553 aaggaatggaagcctgaagtaacggttatttcatagaaatttgaaggcattggatgcttatccactgaagagcgcagaaaaagaacaatagtacaattat 30451652  T
Q  356 acaaccactactccgttactccactcttcatgtctgc 392  Q
    ||||||| ||||||  ||||||||||  |||||||||    
T  30451653 acaaccagtactccactactccactcaccatgtctgc 30451689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 282 - 399
Target Start/End: Complemental strand, 19875940 - 19875821
Alignment:
Q  282 ctatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaa-ggacatagtacaattgtacaaccacta-ctccgttactccac 379  Q
    |||||||||| |||||| ||| || |||||||||||||| | ||||| ||  ||||| ||| ||||||||||||||||||||||| ||||  ||||||||    
T  19875940 ctatttcagaggaattacaaggcaatggatgcttatccactaaagagcgctcgaaaaaggatatagtacaattgtacaaccactacctccactactccac 19875841  T
Q  380 tcttcatgtctgcaatagta 399  Q
    || ||||||||||| |||||    
T  19875840 tcctcatgtctgcagtagta 19875821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 365
Target Start/End: Complemental strand, 7812223 - 7812034
Alignment:
Q  177 gaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagc 276  Q
    |||||||||| ||||||||  ||||||| | ||| ||| |||||||||||| |||| ||| |||     ||| | || ||||||||||||||| |  |||    
T  7812223 gaagctgaagatcatcagaagctgaagaatggaaactaaagttagttaaatgttgtcattctgattttgcataaatgcagaaggaatagaagctttgagc 7812124  T
Q  277 aacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaattgtacaaccacta 365  Q
    |||||||| |||||| |||||  ||| |||||||||||||| ||  ||||||     ||||||||| || ||||||||||||||||||||    
T  7812123 aacgactaattcagaggaatttaaaggcattggatgcttattcaccgaagaggattagaaaaggacaatggtacaattgtacaaccacta 7812034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 12348227 - 12348157
Alignment:
Q  257 aaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaaga 327  Q
    |||||||||||||||| ||||| | ||| |||| | ||||| ||||||||||||||||||||| |||||||    
T  12348227 aaggaatagaagcctggagcaatggctaattcataggaatttgaagtcattggatgcttatcccttgaaga 12348157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 23231509 - 23231447
Alignment:
Q  41 caagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgca 103  Q
    ||||||||||||||||||||||||||||||||||| || ||   ||||||||||| |||||||    
T  23231509 caagtattggttctgaaagaacaaaagagagcaaaggaatttacaaaggaagcttgtgttgca 23231447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 31127166 - 31127227
Alignment:
Q  44 gtattggttctgaaagaacaaaagagagcaaatg-agttactaaaggaagcttatgttgcaag 105  Q
    ||||||||||||||||||||||||||||||| || | ||||| ||||||||||||||||||||    
T  31127166 gtattggttctgaaagaacaaaagagagcaattgaatttact-aaggaagcttatgttgcaag 31127227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 26186043 - 26185951
Alignment:
Q  44 gtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaagagagagtatgaagactgccagagtctggaga 136  Q
    |||||||||||||||||||||||||||||||   | ||   |||||||||||||||||| |||  |||| |||||||   ||||||||| |||    
T  26186043 gtattggttctgaaagaacaaaagagagcaatatatttttcaaaggaagcttatgttgctagactgagtctgaagaccatcagagtctgaaga 26185951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 316
Target Start/End: Complemental strand, 25596012 - 25595953
Alignment:
Q  257 aaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgctta 316  Q
    |||||||||||| ||| |||||||||||||||| | |||||||||  |||| ||||||||    
T  25596012 aaggaatagaagtctggagcaacgactatttcaaaggaattagaatgcatttgatgctta 25595953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 25592782 - 25592738
Alignment:
Q  188 tcatcagagtctgaagactagaagctacagttagttaaattttgt 232  Q
    ||||||||  ||||||||||||||||| |||||||||||| ||||    
T  25592782 tcatcagaagctgaagactagaagctaaagttagttaaatgttgt 25592738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 25930721 - 25930689
Alignment:
Q  163 tctgaagatcatcagaagctgaagttcatcaga 195  Q
    |||||||||||||||||||||||| ||||||||    
T  25930721 tctgaagatcatcagaagctgaagatcatcaga 25930689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 1e-66; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 14 - 369
Target Start/End: Complemental strand, 13654301 - 13653933
Alignment:
Q  14 agacaaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaagagagagta 113  Q
    ||||||||||||||||||| |||| | ||||||||| ||||||||||||||||||||| ||  || |||  |||||||||||||||||||||| || ||     
T  13654301 agacaaaaatttataagtc-ttaaatccaagtattgattctgaaagaacaaaagagagaaatcgaattaacaaaggaagcttatgttgcaagacagggtc 13654203  T
Q  114 tgaagactgccagagtctggagaccataagaagctgac---------------gtcatcaagcgtctgaagatcatcagaagctgaagttcatcagagtc 198  Q
    |||||||| |||||||||| ||||||| ||||||||||               ||||||||||||||||||| |||||||   |||||  ||||||||||    
T  13654202 tgaagactaccagagtctgaagaccatcagaagctgactgccagagtcttgacgtcatcaagcgtctgaagaccatcagagtttgaagcacatcagagtc 13654103  T
Q  199 tgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaatta 298  Q
    ||||| | ||||| | ||||||||| |||||||||||| ||||||||||||| || || ||||||||||||||| |||||| ||||||||||| ||||||    
T  13654102 tgaagtcaagaagttgcagttagttgaattttgttattctgaagacacatcattgcag-aggaatagaagcctggagcaacaactatttcagaggaatta 13654004  T
Q  299 gaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactcc 369  Q
    |||| |||| |||  ||||||| ||||||   ||  ||||||||||| |||||||||||||| ||||||||    
T  13654003 gaaggcattagattattatccactgaagaacacagaaaaaggacataatacaattgtacaacaactactcc 13653933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 40 - 364
Target Start/End: Original strand, 16794096 - 16794418
Alignment:
Q  40 tcaagtattggttctgaaagaacaaaagagagcaaatgagt-tactaaaggaagcttatgttgcaagagagagtatgaagactgccagagtctggagacc 138  Q
    |||| |||||||||||||| |||||||||||||||| || | ||| |||| ||||||||||||||||| | ||| |||||||    || ||||| |||||    
T  16794096 tcaaatattggttctgaaacaacaaaagagagcaaaggaatctacaaaag-aagcttatgttgcaagacaaagtctgaagacaaagagcgtctgaagacc 16794194  T
Q  139 ataagaagctgacgtcatcaagcgtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttatttt 238  Q
    ||| ||||||||| |||||| | || |||||  | |||||||||| || |||||||||||||||| || ||||||  |||||||||||  |||||||| |    
T  16794195 ata-gaagctgacttcatca-gagtatgaagggcctcagaagctggagctcatcagagtctgaagcctggaagctgaagttagttaaaagttgttattct 16794292  T
Q  239 gaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaa 338  Q
    |||  || || | || ||||||||| |||||||||||||| |||||||||||| ||||||| || ||||||||||||||||||||||||| |||  ||||    
T  16794293 gaatgcatatgattgcagaaggaatggaagcctgaagcaatgactatttcagaggaattaggaggcattggatgcttatccattgaagagcgcagaaaaa 16794392  T
Q  339 ggacatagtacaattgtacaaccact 364  Q
    ||||||||||||||||||||||||||    
T  16794393 ggacatagtacaattgtacaaccact 16794418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 162 - 399
Target Start/End: Complemental strand, 20418456 - 20418219
Alignment:
Q  162 gtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaagga 261  Q
    ||||||||| | |||||||||||||||||||||| |||||||| | ||||||  |||||||||||  |||||||| |||| |||||| | |||||||| |    
T  20418456 gtctgaagagcctcagaagctgaagttcatcagattctgaagattggaagctggagttagttaaaagttgttattctgaatacacatgattgtagaagaa 20418357  T
Q  262 atagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaacc 361  Q
    || |||| ||| |||||||||||||||||| |||||||||| |||||||| |||||||  ||||||| ||| ||||| ||||||||||||||| | ||||    
T  20418356 atggaagtctggagcaacgactatttcagaggaattagaaggcattggatacttatcctctgaagagcgcaagaaaatgacatagtacaattggaaaacc 20418257  T
Q  362 actactccgttactccactcttcatgtctgcaatagta 399  Q
    |||| ||| |||||||||||| ||||||||||||||||    
T  20418256 actaatccattactccactctccatgtctgcaatagta 20418219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 14 - 369
Target Start/End: Original strand, 8728783 - 8729138
Alignment:
Q  14 agacaaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagtt-actaaa-ggaagcttatgttgcaagagagag 111  Q
    ||||||||||| ||| ||| |||||| ||||||| ||||||| ||||||||| ||||||||  || || || ||| |||||||| |||||||||| || |    
T  8728783 agacaaaaattaatatgtctttaatt-caagtataggttctggaagaacaaatgagagcaatggaatttacaaaaaggaagcttgtgttgcaagatagcg 8728881  T
Q  112 tatgaagactgccagagtctggagaccataagaagctgacgtcatcaagcgtctgaagatc-atcagaagctgaagttcatcagagtctgaagactagaa 210  Q
    | ||||||||  ||||   ||   ||||   |||||||||||||||    ||||||||| | |||||||||||||||||||||||||||||||||| |||    
T  8728882 tctgaagactatcagaagttgcctacca---gaagctgacgtcatctta-gtctgaagaaccatcagaagctgaagttcatcagagtctgaagactggaa 8728977  T
Q  211 gctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattgga 310  Q
     ||  |||| ||||||| |||||||||||||  || || | || ||||||||| |||||||| |||||||||||||| ||| |||||||||| |||||||    
T  8728978 actgaagtttgttaaatgttgttattttgaatgcatatgattgcagaaggaatggaagcctggagcaacgactattttagaggaattagaaggcattgga 8729077  T
Q  311 tgcttatccattgaagagtgcatg-aaaaggacatagtacaattgtac-aaccactactcc 369  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||||||| ||||||||||||    
T  8729078 tgcttatccactgaagagcgcatgaaaaaggacatagtacaattgtacaaaccactactcc 8729138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 14 - 369
Target Start/End: Original strand, 9080670 - 9081025
Alignment:
Q  14 agacaaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagtt-actaaa-ggaagcttatgttgcaagagagag 111  Q
    ||||||||||| ||| ||| |||||| ||||||| ||||||| ||||||||| ||||||||  || || || ||| |||||||| |||||||||| || |    
T  9080670 agacaaaaattaatatgtctttaatt-caagtataggttctggaagaacaaatgagagcaatggaatttacaaaaaggaagcttgtgttgcaagatagcg 9080768  T
Q  112 tatgaagactgccagagtctggagaccataagaagctgacgtcatcaagcgtctgaagatc-atcagaagctgaagttcatcagagtctgaagactagaa 210  Q
    | ||||||||  ||||   ||   ||||   |||||||||||||||    ||||||||| | |||||||||||||||||||||||||||||||||| |||    
T  9080769 tctgaagactatcagaagttgcctacca---gaagctgacgtcatctta-gtctgaagaaccatcagaagctgaagttcatcagagtctgaagactggaa 9080864  T
Q  211 gctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattgga 310  Q
     ||  |||| ||||||| |||||||||||||  || || | || ||||||||| |||||||| |||||||||||||| ||| |||||||||| |||||||    
T  9080865 actgaagtttgttaaatgttgttattttgaatgcatatgattgcagaaggaatggaagcctggagcaacgactattttagaggaattagaaggcattgga 9080964  T
Q  311 tgcttatccattgaagagtgcatg-aaaaggacatagtacaattgtac-aaccactactcc 369  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||||||| ||||||||||||    
T  9080965 tgcttatccactgaagagcgcatgaaaaaggacatagtacaattgtacaaaccactactcc 9081025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 181 - 369
Target Start/End: Complemental strand, 21317596 - 21317408
Alignment:
Q  181 ctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacg 280  Q
    ||||||||||||||||| || || | | ||||| |||||||||||| ||||||| ||||| ||||||| | || |||||||||||||||||  |||||||    
T  21317596 ctgaagttcatcagagtatgtagtcaataagctgcagttagttaaagtttgttaatttgatgacacatgattgcagaaggaatagaagcctagagcaacg 21317497  T
Q  281 actatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactcc 369  Q
    ||||||| |||||||||| ||| |||| |||||||||||  ||||||| ||| |||||||||||| |||||||||||||||||||||||    
T  21317496 actattttagatgaattataaggcatttgatgcttatcctctgaagagcgcaggaaaaggacataatacaattgtacaaccactactcc 21317408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 171 - 399
Target Start/End: Original strand, 19197820 - 19198049
Alignment:
Q  171 tcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcc 270  Q
    |||||||||||| ||| ||||||||  ||||||||| |||  | ||||||| |||||||||||||| ||||  || || | || ||||||||| ||||||    
T  19197820 tcatcagaagctaaagatcatcagaagctgaagactggaatattcagttagctaaattttgttattctgaatgcatatgattgcagaaggaatggaagcc 19197919  T
Q  271 tgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaattgtacaaccactactcc 369  Q
    || ||||||||||| |||||| ||||| |||| ||||||||| |||||||||||||| ||||  |||||||| |||||| |||||||||||||||||| |    
T  19197920 tggagcaacgactacttcagaggaatttgaaggcattggatgattatccattgaagaatgcaacaaaaggacaatagtaaaattgtacaaccactacttc 19198019  T
Q  370 gttactccactcttcatgtctgcaatagta 399  Q
      ||||||||||| ||||||||| ||||||    
T  19198020 actactccactctccatgtctgctatagta 19198049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 163 - 369
Target Start/End: Original strand, 22766470 - 22766672
Alignment:
Q  163 tctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaa 262  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||    |||||| || || |||||| ||||  |  || | || ||||||||    
T  22766470 tctgaagatcatcagaagctgaagttcatcaaagtctgaagactggaagct----ttagtttaagtt-gttattctgaatgcttatgattgcagaaggaa 22766564  T
Q  263 tagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaattgtacaacc 361  Q
    | |||||||  ||||||| ||| |||||| ||||| |||| ||||||||||||||||| ||||||| ||| ||||||||| |||||||||||||||||||    
T  22766565 tggaagcctagagcaacggctaattcagaggaatttgaaggcattggatgcttatccactgaagagcgcaggaaaaggacaatagtacaattgtacaacc 22766664  T
Q  362 actactcc 369  Q
    ||||||||    
T  22766665 actactcc 22766672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 142 - 399
Target Start/End: Complemental strand, 16882535 - 16882275
Alignment:
Q  142 agaagctgacgtcatca-agcgtctgaagatc-atcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttg 239  Q
    ||||||||| ||||||| || ||||||||| | |||||||| | || || |||||||| |||||||| ||||||| |||| ||||||  |||||||| ||    
T  16882535 agaagctgatgtcatcagagagtctgaagaaccatcagaagttaaaattgatcagagtttgaagactggaagctaaagtttgttaaaagttgttattctg 16882436  T
Q  240 aagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaag 339  Q
    ||   | || | || ||||||||| |||||||| | ||||  |||||||||| |||||| ||| ||||||||||||||||| |||| || ||| |||||     
T  16882435 aatggatatgattgcagaaggaatggaagcctgcaacaacagctatttcagaggaattaaaaggcattggatgcttatccactgaatagcgcaggaaaaa 16882336  T
Q  340 gacatagtacaattgtacaaccacta-ctccgttactccactcttcatgtctgcaatagta 399  Q
     ||||||||||||||||||||||||| |||| ||||||||||| || |||||||| |||||    
T  16882335 aacatagtacaattgtacaaccactacctccattactccactcctcttgtctgcagtagta 16882275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 181 - 320
Target Start/End: Complemental strand, 3087742 - 3087603
Alignment:
Q  181 ctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacg 280  Q
    ||||||||||||||||||||| | | |||||||  ||||||||||| || ||||||| |||||||||| | || |||||||||||||||||||||||||     
T  3087742 ctgaagttcatcagagtctgatgtcaagaagctcaagttagttaaagttggttatttcgaagacacatgattgcagaaggaatagaagcctgaagcaaca 3087643  T
Q  281 actatttcagatgaattagaagtcattggatgcttatcca 320  Q
    ||| ||||||| |||||||||  ||||| |||||||||||    
T  3087642 actctttcagaggaattagaatacattgaatgcttatcca 3087603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 184 - 369
Target Start/End: Complemental strand, 315286 - 315102
Alignment:
Q  184 aagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgact 283  Q
    |||||||||||||||||||| | ||||||   | ||||||||| |   ||| ||||||||||||| | || || ||||||| || |||| ||||||| ||    
T  315286 aagttcatcagagtctgaaggcaagaagcaggaattagttaaactcaatta-tttgaagacacatgattgcaggaggaataaaaacctggagcaacggct 315188  T
Q  284 atttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaattgtacaaccactactcc 369  Q
    |||||||| |||||||||| ||||| ||||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  315187 atttcagaggaattagaaggcattgaatgcttatccactgaagagcgcatgaaaaggacaatagtac-attgtacaaccactactcc 315102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 254 - 399
Target Start/End: Complemental strand, 14007704 - 14007558
Alignment:
Q  254 tagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggaca-tagtacaat 352  Q
    |||||||||| |||||||| | ||| | ||| || ||| ||||| |||| ||||||||| ||||||| | ||||| ||| |||||||||| |||| ||||    
T  14007704 tagaaggaatggaagcctgcaacaatggctaatttagaggaatttgaaggcattggatgtttatccactaaagagcgcaggaaaaggacaatagtgcaat 14007605  T
Q  353 tgtacaaccactactccgttactccactcttcatgtctgcaatagta 399  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||    
T  14007604 tgtacaaccactactccactactccacttttcatgtctgcaatagta 14007558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 207 - 365
Target Start/End: Original strand, 14077329 - 14077487
Alignment:
Q  207 agaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcat 306  Q
    |||||||  ||||||||| || |||| |||||||  |||||||| || ||||  ||||  |||||| | ||| |  ||||||||| |||||||||| |||    
T  14077329 agaagctgaagttagttatatgttgtcattttgattacacatcattgcagaaccaataagagcctggatcaatggatatttcagaggaattagaagacat 14077428  T
Q  307 tggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccacta 365  Q
    |||||||||||||| ||||||| ||| |||||||||||||||||| |||||||||||||    
T  14077429 tggatgcttatccactgaagagcgcaagaaaaggacatagtacaactgtacaaccacta 14077487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 216 - 369
Target Start/End: Complemental strand, 13699528 - 13699375
Alignment:
Q  216 agttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgctt 315  Q
    ||||||||||  || |||||||||||||||||| | || |||| ||| ||||| ||| |||||| ||||||||||| |||| ||||| ||||||||||||    
T  13699528 agttagttaatgttggttattttgaagacacatgattgcagaaagaaaagaagtctggagcaacaactatttcagaggaataagaaggcattggatgctt 13699429  T
Q  316 atccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactcc 369  Q
    ||||    ||||| | |  ||||| |||||||||||||||||||||||||||||    
T  13699428 atccgcataagagcgtacaaaaagaacatagtacaattgtacaaccactactcc 13699375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 265 - 369
Target Start/End: Original strand, 4243208 - 4243311
Alignment:
Q  265 gaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccact 364  Q
    |||| ||| |||||||||||||||||| |||||| ||| ||||| ||||||||||| ||||||| ||| ||||| |||||||||||||||||||||||||    
T  4243208 gaagtctggagcaacgactatttcagaggaatta-aaggcattgaatgcttatccactgaagagcgcaagaaaatgacatagtacaattgtacaaccact 4243306  T
Q  365 actcc 369  Q
    |||||    
T  4243307 actcc 4243311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 124 - 263
Target Start/End: Complemental strand, 7477840 - 7477700
Alignment:
Q  124 cagagtctggagaccataagaagctgacgtcatca-agcgtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagt 222  Q
    ||||||||| |||| || |||||||||| |||||| || ||||||||| |||||||||||||||||||| ||||| |||||||| ||||||| |||||||    
T  7477840 cagagtctgaagacaatcagaagctgacatcatcagagagtctgaagagcatcagaagctgaagttcattagagtatgaagactggaagctagagttagt 7477741  T
Q  223 taaattttgttattttgaagacacatcactgtagaaggaat 263  Q
    ||||  |||||||| ||||  || |||| || |||||||||    
T  7477740 taaacattgttattctgaattcatatcattgcagaaggaat 7477700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 216 - 363
Target Start/End: Complemental strand, 10851979 - 10851832
Alignment:
Q  216 agttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgctt 315  Q
    |||||||||||| |||| |||||||   ||||||| || |||||||||| |||| || || |||| |||||||| | || ||||||  ||||||||||||    
T  10851979 agttagttaaatgttgtcattttgattgcacatcattgcagaaggaataaaagcttggagtaacggctatttcaaaggagttagaaagcattggatgctt 10851880  T
Q  316 atccattgaagagtgcatgaaaaggacatagtacaattgtacaaccac 363  Q
    || || |||||||  || ||||||||||||||||||||||||||||||    
T  10851879 attcactgaagagcacaagaaaaggacatagtacaattgtacaaccac 10851832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 255 - 369
Target Start/End: Original strand, 16305188 - 16305303
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaatt 353  Q
    |||||||||||||||||||||||| || ||||||||| ||| |||||| |||||||| ||||| || | ||||| ||| ||||||||| ||| |||| ||    
T  16305188 agaaggaatagaagcctgaagcaatgaatatttcagaggaaatagaaggcattggatacttatgcactaaagagcgcaggaaaaggacaatattacattt 16305287  T
Q  354 gtacaaccactactcc 369  Q
    ||||||||||||||||    
T  16305288 gtacaaccactactcc 16305303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 13699694 - 13699589
Alignment:
Q  14 agacaaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaagagagagta 113  Q
    ||||||||||||||||||| |||| |  |||||||||||||||||||||||||||||||||  || ||   |||||||||||||||||||||| |||||     
T  13699694 agacaaaaatttataagtc-ttaaatcaaagtattggttctgaaagaacaaaagagagcaatggaatttgcaaaggaagcttatgttgcaagacagagtc 13699596  T
Q  114 tgaagac 120  Q
    |||||||    
T  13699595 tgaagac 13699589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 171 - 369
Target Start/End: Complemental strand, 14072906 - 14072707
Alignment:
Q  171 tcatcagaagctgaagttcatcagagtctgaagactagaagctac--agttagttaaattttgttattttgaagacacatcactgtagaaggaatagaag 268  Q
    |||||||||||||||| ||||||||  ||||||||| |||  | |  |||| ||||||| |||||||| | | | || || |||| ||||||||| | ||    
T  14072906 tcatcagaagctgaagatcatcagaagctgaagactggaatattccaagtt-gttaaatgttgttattctcatg-catataactgcagaaggaatgggag 14072809  T
Q  269 cctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaattgtacaaccactact 367  Q
    |||| |||||||| || || ||| ||||| |||| ||||||||||||||||||||||||  ||  ||||||||| |||||||| |||||||||||| |||    
T  14072808 cctggagcaacgaataatttagaggaatttgaaggcattggatgcttatccattgaagaacgcgggaaaaggacaatagtacacttgtacaaccaccact 14072709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 237 - 381
Target Start/End: Complemental strand, 27851693 - 27851546
Alignment:
Q  237 ttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtg--catg 334  Q
    |||||||||||   ||| ||||||||||||||| || |||||| |||||||||||  | ||||||| ||||||||||||||||  |||||| ||  ||      
T  27851693 ttgaagacacaagtctgcagaaggaatagaagcatggagcaacaactatttcagagaagttagaagacattggatgcttatccgctgaagaatggacaga 27851594  T
Q  335 aaaaggac-atagtacaattgtacaaccactactccgttactccactc 381  Q
     ||||||| ||||||||||||||||||||||||||   ||||||||||    
T  27851593 gaaaggacaatagtacaattgtacaaccactactctactactccactc 27851546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 199 - 365
Target Start/End: Complemental strand, 17697797 - 17697630
Alignment:
Q  199 tgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaatta 298  Q
    |||||||| ||||||  |||||||||||| |||| ||| | |   | ||||| || |||||||||||||||||| |||||   ||| |||||| |||||     
T  17697797 tgaagactggaagctgaagttagttaaatgttgtcattctaattgcgcatcattgcagaaggaatagaagcctggagcaatagctaattcagaggaattt 17697698  T
Q  299 gaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaattgtacaaccacta 365  Q
    |||| |||||||||||||||||| |||||   ||  |||| ||| |||||||||||||||||||||||    
T  17697697 gaaggcattggatgcttatccatagaagaacacagaaaaacgacaatagtacaattgtacaaccacta 17697630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 256 - 368
Target Start/End: Complemental strand, 11078778 - 11078665
Alignment:
Q  256 gaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaattg 354  Q
    ||||||||||||||||| |||||| ||| ||| ||| |||| ||||| |||| |||||||||||| | ||||| | |  |||||||| ||||||||||||    
T  11078778 gaaggaatagaagcctggagcaactactcttttagaggaatcagaaggcattagatgcttatccacttaagagcgtagaaaaaggacaatagtacaattg 11078679  T
Q  355 tacaaccactactc 368  Q
    |||| |||||||||    
T  11078678 tacatccactactc 11078665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 369
Target Start/End: Original strand, 17762058 - 17762245
Alignment:
Q  182 tgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacga 281  Q
    ||||||||||||||||||||||   |||| ||  ||| |||||||||  ||||||| |||||||||    |||| ||||||||||||| || ||||||||    
T  17762058 tgaagttcatcagagtctgaagtgaagaacctgaagtcagttaaattg-gttattt-gaagacacaagtttgtataaggaatagaagcttggagcaacga 17762155  T
Q  282 ctatttcagatgaattagaagtcattggatgcttatccattgaag-agtgcatgaaaaggac-atagtacaattgtacaaccactactcc 369  Q
     |||||  || |||||||||| |||| |||| ||||||| ||||| ||  ||   ||||||| |||||| ||||||||||||||||||||    
T  17762156 ttattttggaggaattagaaggcatttgatgtttatccagtgaagaaggtcagagaaaggacaatagtaaaattgtacaaccactactcc 17762245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 369
Target Start/End: Original strand, 19063378 - 19063565
Alignment:
Q  182 tgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacga 281  Q
    ||||||||||||||||||||||   |||| ||  ||| |||||||||  ||||||| |||||||||    |||| ||||||||||||| || ||||||||    
T  19063378 tgaagttcatcagagtctgaagtgaagaacctgaagtcagttaaattg-gttattt-gaagacacaagtttgtataaggaatagaagcttggagcaacga 19063475  T
Q  282 ctatttcagatgaattagaagtcattggatgcttatccattgaag-agtgcatgaaaaggac-atagtacaattgtacaaccactactcc 369  Q
     |||||  || |||||||||| |||| |||| ||||||| ||||| ||  ||   ||||||| |||||| ||||||||||||||||||||    
T  19063476 ttattttggaggaattagaaggcatttgatgtttatccagtgaagaaggtcagagaaaggacaatagtaaaattgtacaaccactactcc 19063565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 7494492 - 7494428
Alignment:
Q  162 gtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaa 226  Q
    ||||||||| |||||||||||||||||||||||||| |||||| | ||||||  |||||||||||    
T  7494492 gtctgaagagcatcagaagctgaagttcatcagagtatgaagattggaagctggagttagttaaa 7494428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 387
Target Start/End: Complemental strand, 27374912 - 27374763
Alignment:
Q  247 atcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaaga--------gtgcatgaaaa 338  Q
    |||| ||||||||| || |||||||  |||||||| | ||| ||| |||||||||| |||||||||||| |||| | ||||        | |||||||||    
T  27374912 atcattgtagaaggtatggaagcctagagcaacgagtgttttagaggaattagaaggcattggatgcttctccactaaagaactaaagagcgcatgaaaa 27374813  T
Q  339 ggacatagtacaattgtacaaccacta-ctccgttactccactcttcatg 387  Q
    ||||||||||||||||||||||||| | || | ||||| |||||||||||    
T  27374812 ggacatagtacaattgtacaaccacaaccttcattacttcactcttcatg 27374763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 255 - 320
Target Start/End: Original strand, 2903214 - 2903279
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatcca 320  Q
    |||||||||||||| |||| ||||| | |||||| || |||||||||| |||||||||||||||||    
T  2903214 agaaggaatagaagactgatgcaacaaatatttctgaagaattagaaggcattggatgcttatcca 2903279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 7494659 - 7494570
Alignment:
Q  17 caaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagttact-aaaggaagcttatgttgcaaga 106  Q
    |||||||||||||||| |||||| ||||| ||| || |||||||||||| ||||||||  || ||  | ||||||||||||||||||||||    
T  7494659 caaaaatttataagtctttaatt-caagttttgattatgaaagaacaaatgagagcaatggaatttttcaaaggaagcttatgttgcaaga 7494570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 50721986 - 50721913
Alignment:
Q  128 gtctggagaccataagaagctgacgtcatca-agcgtctgaagatcatcagaagctgaagttcatcagagtctg 200  Q
    ||||| ||||||||||||||||||||||||| || ||||||||| | | | ||||||||||||| || ||||||    
T  50721986 gtctgaagaccataagaagctgacgtcatcagagagtctgaagagccttaaaagctgaagttcaacaaagtctg 50721913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 50790863 - 50790936
Alignment:
Q  128 gtctggagaccataagaagctgacgtcatca-agcgtctgaagatcatcagaagctgaagttcatcagagtctg 200  Q
    ||||| ||||||||||||||||||||||||| || ||||||||| | | | ||||||||||||| || ||||||    
T  50790863 gtctgaagaccataagaagctgacgtcatcagagagtctgaagagccttaaaagctgaagttcaacaaagtctg 50790936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 3087853 - 3087781
Alignment:
Q  33 cttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaag 105  Q
    ||||| || |||||||||||||  ||||||||||||||||||  || ||   |||||||||||||||||||||    
T  3087853 cttaaattaaagtattggttctagaagaacaaaagagagcaatggaatttacaaaggaagcttatgttgcaag 3087781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 20418561 - 20418434
Alignment:
Q  22 atttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaagagagagtatgaagact 121  Q
    |||| |||||| |||||| |||||||||||| |||||||||||| ||||||||  || ||   ||| ||||||| |||||||||| | ||| ||||||||    
T  20418561 atttgtaagtctttaatt-caagtattggttttgaaagaacaaatgagagcaatggaatttacaaaagaagcttttgttgcaagacaaagtctgaagact 20418463  T
Q  122 gccagagtctggagaccataagaagctga 150  Q
       |||||||| ||| | | |||||||||    
T  20418462 aagagagtctgaagagcctcagaagctga 20418434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 320
Target Start/End: Complemental strand, 15552235 - 15552189
Alignment:
Q  274 agcaacgactatttcagatgaattagaagtcattggatgcttatcca 320  Q
    ||||||||||||||| ||||||||||||| | ||| |||||||||||    
T  15552235 agcaacgactatttcggatgaattagaaggctttgaatgcttatcca 15552189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 393
Target Start/End: Complemental strand, 16880062 - 16880009
Alignment:
Q  341 acatagtacaattgtacaaccacta-ctccgttactccactcttcatgtctgca 393  Q
    ||||||||||||||||||||||||| ||||  |||||||||| ||||| |||||    
T  16880062 acatagtacaattgtacaaccactacctccactactccactcatcatggctgca 16880009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 366
Target Start/End: Complemental strand, 6253545 - 6253441
Alignment:
Q  264 agaagcctgaagcaacgactatttcagatgaattagaa-gtcattggatgcttatccattgaagagtgcatgaaaaggaca-tagtacaattgtacaacc 361  Q
    ||||||||| ||||||| ||| |||||| |||||  || | |||||||||||||| | |||||||  |   |||||||||| |||||||||||||| |||    
T  6253545 agaagcctggagcaacggctaattcagaggaattttaaaggcattggatgcttattctttgaagaacgttggaaaaggacaatagtacaattgtactacc 6253446  T
Q  362 actac 366  Q
    |||||    
T  6253445 actac 6253441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 123; Significance: 5e-63; HSPs: 2)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 142 - 399
Target Start/End: Original strand, 4131 - 4389
Alignment:
Q  142 agaagctgacgtcatcaa-gcgtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttga 240  Q
    |||||||| ||||||||| | ||||||||| | ||||||||||||||||| ||||||||||||||| ||||||  |||||||||||  ||||||||||||    
T  4131 agaagctggcgtcatcaaagagtctgaagagcctcagaagctgaagttcaacagagtctgaagactggaagctggagttagttaaaagttgttattttga 4230  T
Q  241 agacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaagg 340  Q
    |  || || | |||||||||||| |||||||  | |||||||||||||||| |||||||||  ||||||||||||||||||||||||| ||| ||||||     
T  4231 attcatatgattgtagaaggaatggaagcctagaacaacgactatttcagaagaattagaaagcattggatgcttatccattgaagagcgcaggaaaaga 4330  T
Q  341 acatagtacaattgtacaaccactactccgttactccactcttcatgtctgcaatagta 399  Q
    |||| ||||||||||||||||||| ||||  |||||||||| |||||| |||| |||||    
T  4331 acattgtacaattgtacaaccacttctccactactccactcctcatgtttgcagtagta 4389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 142 - 399
Target Start/End: Original strand, 11414 - 11672
Alignment:
Q  142 agaagctgacgtcatcaa-gcgtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttga 240  Q
    |||||||| ||||||||| | ||||||||| | ||||||||||||||||| ||||||||||||||| ||||||  |||||||||||  ||||||||||||    
T  11414 agaagctggcgtcatcaaagagtctgaagagcctcagaagctgaagttcaacagagtctgaagactggaagctggagttagttaaaagttgttattttga 11513  T
Q  241 agacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaagg 340  Q
    |  || || | |||||||||||| |||||||  | |||||||||||||||| |||||||||  ||||||||||||||||||||||||| ||| ||||||     
T  11514 attcatatgattgtagaaggaatggaagcctagaacaacgactatttcagaagaattagaaagcattggatgcttatccattgaagagcgcaggaaaaga 11613  T
Q  341 acatagtacaattgtacaaccactactccgttactccactcttcatgtctgcaatagta 399  Q
    |||| ||||||||||||||||||| ||||  |||||||||| |||||| |||| |||||    
T  11614 acattgtacaattgtacaaccacttctccactactccactcctcatgtttgcagtagta 11672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 147 - 369
Target Start/End: Complemental strand, 31864 - 31642
Alignment:
Q  147 ctgacgtcatcaagcgtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacac 246  Q
    ||||||||||||||||||| |||| |||||||  ||||||||||||  |||||| || | ||||||   ||||||||||| ||||||||| | |||||||    
T  31864 ctgacgtcatcaagcgtcttaagaccatcagagtctgaagttcatctaagtctgtagtcaagaagccgaagttagttaaagtttgttattgtcaagacac 31765  T
Q  247 atcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatag 346  Q
    |||| || |||||||||||||||||| |||||||||||||| | | ||||||||||  |||||||||||||||| ||||||| |||||||||||| ||||    
T  31764 atcattgcagaaggaatagaagcctggagcaacgactattttaaaggaattagaaggaattggatgcttatccactgaagagcgcatgaaaaggatatag 31665  T
Q  347 tacaattgtacaaccactactcc 369  Q
    |||||||||||||||||||||||    
T  31664 tacaattgtacaaccactactcc 31642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 2e-59; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 191 - 424
Target Start/End: Complemental strand, 2651989 - 2651765
Alignment:
Q  191 tcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcag 290  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||| ||||||||||||| || | ||||||||||||| || || ||||||||||||||    
T  2651989 tcagagtctgaagactagaagttgcagttagttaaagtttgttattctgaagacacatcattgcaaaaggaatagaagcttggagtaacgactatttcag 2651890  T
Q  291 atgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactccgttactccactcttcatgtct 390  Q
    | |||||||||| ||||| ||||||||||| ||||||| | | ||||||||||||||||||||||||||||||||||||   ||||      ||||||||    
T  2651889 aggaattagaaggcattgaatgcttatccactgaagagcgtaggaaaaggacatagtacaattgtacaaccactactcc---actc------tcatgtct 2651799  T
Q  391 gcaatagtattgatatagttgtgtctacgctggt 424  Q
    ||||||||| || |||| ||||||||||||||||    
T  2651798 gcaatagtactgctataattgtgtctacgctggt 2651765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 190 - 398
Target Start/End: Original strand, 20570920 - 20571128
Alignment:
Q  190 atcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttca 289  Q
    |||| |||||| ||||| |||||| ||||||||||||  |||||||| ||||| ||||| | ||||||||||||||||| ||| ||||||||||||||||    
T  20570920 atcaaagtctggagactggaagctgcagttagttaaaggttgttattctgaagtcacataattgtagaaggaatagaagtctggagcaacgactatttca 20571019  T
Q  290 gatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactccgttactccactcttcatgtc 389  Q
    || |||||||||| |||| |||||||||||| |||||||  ||  |||||||||||||||||||||||||||||||||||  |||| ||||| |||||||    
T  20571020 gaggaattagaaggcatttgatgcttatccactgaagagcacagaaaaaggacatagtacaattgtacaaccactactccactacttcactcctcatgtc 20571119  T
Q  390 tgcaatagt 398  Q
    || ||||||    
T  20571120 tgtaatagt 20571128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 172 - 399
Target Start/End: Complemental strand, 13027988 - 13027760
Alignment:
Q  172 catcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcct 271  Q
    |||||||||||| |||||||||||||||||||||  ||||||  |||||||||||| || ||||| ||||  || |||| || ||||||||| |||||||    
T  13027988 catcagaagctggagttcatcagagtctgaagacgggaagctgaagttagttaaatgtttttattctgaatgcatatcattgcagaaggaatggaagcct 13027889  T
Q  272 gaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccacta-ctccg 370  Q
    | ||||||| |||||||||| |||||||||| ||||||||||||||||| ||||||| ||| ||||| |||||| |||||||||||| |||||| ||||     
T  13027888 ggagcaacggctatttcagaggaattagaaggcattggatgcttatccactgaagagcgcaggaaaatgacatattacaattgtacagccactacctcca 13027789  T
Q  371 ttactccactcttcatgtctgcaatagta 399  Q
     ||||||||||  ||||||| || |||||    
T  13027788 ctactccactccccatgtctacagtagta 13027760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 142 - 391
Target Start/End: Original strand, 14357003 - 14357253
Alignment:
Q  142 agaagctgacgtcatca-agcgtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttga 240  Q
    ||||| ||||||||||| ||  |||||||| | ||| ||||||||||||| |||||||| |||| | ||| ||  |||||||||||  |||||||| |||    
T  14357003 agaagttgacgtcatcagagaatctgaagagcctcaaaagctgaagttcaacagagtctaaagattggaaactgaagttagttaaaagttgttattctga 14357102  T
Q  241 agacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaagg 340  Q
    |||||||||| || | |||||||||||||||| ||||| | |||||||||| |||||||||| ||||||||| ||||||| | ||||| ||| |||||||    
T  14357103 agacacatcattgcaaaaggaatagaagcctggagcaatgtctatttcagaggaattagaaggcattggatggttatccactaaagagcgcaggaaaagg 14357202  T
Q  341 acatagtacaattgtacaaccactactccgttactccactcttcatgtctg 391  Q
    | || ||||| ||||||||||||||||||  |||| ||||| |||||||||    
T  14357203 atatggtacatttgtacaaccactactccactacttcactcctcatgtctg 14357253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 14 - 369
Target Start/End: Original strand, 14902210 - 14902558
Alignment:
Q  14 agacaaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaagagagagta 113  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||   | ||   |||||||| ||||||||||||| |||||     
T  14902210 agacaaaaatttataagtc-ttaaattcaagtattggttctgaaagaataaaagagagcaatgaaatttgaaaaggaaggttatgttgcaagacagagtt 14902308  T
Q  114 tgaagactgccagagtctggagaccataagaagctgacgtcatcaagcgtctgaagatcatcagaag-ctgaagttcatcagagtctgaagactagaagc 212  Q
    |||||||||||| ||  || ||| | | ||||| ||||  |    || ||| || | ||||||   | ||||||  ||||||||| ||||||| ||||||    
T  14902309 tgaagactgccaaagattgaagaactttagaagatgactgct---agagtccgacg-tcatcaagcgtctgaagaccatcagagtatgaagacaagaagc 14902404  T
Q  213 tacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatg 312  Q
    |  ||||||||||  ||||||||| |   |||| |||| || ||||||||||||||| || |||||||||||||| ||| |||||||||| || || |||    
T  14902405 tgaagttagttaatgtttgttattctt--gacatatcattgcagaaggaatagaagcttggagcaacgactattttagaggaattagaaggcagtgaatg 14902502  T
Q  313 cttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactcc 369  Q
    ||| |||| | ||||| || |||||| ||||||||||||||||||||||||||||||    
T  14902503 cttctccactaaagagcgc-tgaaaatgacatagtacaattgtacaaccactactcc 14902558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 162 - 399
Target Start/End: Original strand, 16324409 - 16324646
Alignment:
Q  162 gtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaagga 261  Q
    ||||||||| | ||| ||| || ||||||||||| |||||||||| || |||  | ||||| |||  |||||||| ||||  || |||| ||||||||||    
T  16324409 gtctgaagaacctcaaaagttggagttcatcagaatctgaagactggatgctgaaattagtcaaaagttgttattctgaatgcatatcattgtagaagga 16324508  T
Q  262 atagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaacc 361  Q
     | |||||||||| |||||||||||||||| |||||||||| ||||| ||||||||||||||||||| ||| | |||||||| |||||||| ||||||||    
T  16324509 tttgaagcctgaaacaacgactatttcagaggaattagaaggcattgtatgcttatccattgaagagcgca-ggaaaggacacagtacaatcgtacaacc 16324607  T
Q  362 acta-ctccgttactccactcttcatgtctgcaatagta 399  Q
    |||| ||||  |||| ||||| |||||||| || |||||    
T  16324608 actatctccactacttcactcctcatgtctacagtagta 16324646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 2652128 - 2651992
Alignment:
Q  14 agacaaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaagagagagta 113  Q
    |||||||||||| |||||| |||| ||||||||||||||||| || ||||||||| |||||  || |||  |||||||||||||||||||||| | |||     
T  2652128 agacaaaaatttgtaagtc-ttaaattcaagtattggttctggaataacaaaagaaagcaatggaattagcaaaggaagcttatgttgcaagaaatagtt 2652030  T
Q  114 tgaagactgccagagtctggagaccataagaagctgac 151  Q
    |||||||| |||||||||| ||||||| ||||||||||    
T  2652029 tgaagactaccagagtctgaagaccatcagaagctgac 2651992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 220 - 369
Target Start/End: Complemental strand, 18774209 - 18774060
Alignment:
Q  220 agttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatcc 319  Q
    |||||||  |||||||| |||||| |||||| || |||||||||||| ||||  |||||| |||||||  || |||||||||| |||| |||||||||||    
T  18774209 agttaaaagttgttattatgaagaaacatcattgcagaaggaatagatgcctagagcaacaactatttaggaggaattagaaggcattagatgcttatcc 18774110  T
Q  320 attgaagagtgcatgaaaaggacatagtacaattgtacaaccactactcc 369  Q
    | | ||||| ||| |||||| ||||| |||||||||||||||||||||||    
T  18774109 acttaagagcgcaggaaaagaacataatacaattgtacaaccactactcc 18774060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 226 - 382
Target Start/End: Complemental strand, 20577439 - 20577283
Alignment:
Q  226 attttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaa 325  Q
    |||||||| |||||||||||||   ||| ||||| |||||||||||||||||| | ||||||||||  ||||||||| |||||||| |||||||| ||||    
T  20577439 attttgtt-ttttgaagacacaagtctgcagaagaaatagaagcctgaagcaatggctatttcagagaaattagaaggcattggattcttatccaatgaa 20577341  T
Q  326 gagtgc-atgaaaaggacatagtacaattgtacaaccactactccgttactccactct 382  Q
    ||||||  | ||  ||| |||||||||||| ||||||||||||||  |||||||||||    
T  20577340 gagtgcggtaaatgggaaatagtacaattgcacaaccactactccactactccactct 20577283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 257 - 381
Target Start/End: Complemental strand, 18394659 - 18394532
Alignment:
Q  257 aaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaa-gagtgcatgaaaaggac--atagtacaatt 353  Q
    |||||||||||| ||| ||||||||| |||||||| |||||| ||| |||| || ||||||||| |||| ||| |||   |||||||  |||||||||||    
T  18394659 aaggaatagaagtctggagcaacgaccatttcagaggaattataaggcatttgaggcttatccactgaaggagcgcagagaaaggacaaatagtacaatt 18394560  T
Q  354 gtacaaccactactccgttactccactc 381  Q
    |||||||||||||||| | |||||||||    
T  18394559 gtacaaccactactccatgactccactc 18394532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 296 - 399
Target Start/End: Original strand, 19889020 - 19889124
Alignment:
Q  296 ttagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccacta-ctccgttactccactcttcatgtctgcaa 394  Q
    ||||||| ||||||||| ||||||| || |||| ||| |||||||||||||||| ||||||||||||||| ||||  |||||||||| |||||||| ||     
T  19889020 ttagaaggcattggatgtttatccactggagagcgcaggaaaaggacatagtacgattgtacaaccactacctccactactccactcctcatgtctccat 19889119  T
Q  395 tagta 399  Q
    |||||    
T  19889120 tagta 19889124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 255 - 363
Target Start/End: Complemental strand, 10249941 - 10249832
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaatt 353  Q
    |||||||||||||| ||  |||||| |||| || ||| ||||| ||||||||||||||||||||| |||||||      ||||||||| |||||||||||    
T  10249941 agaaggaatagaagtctagagcaacaactaattaagaggaatttgaagtcattggatgcttatcccttgaagaacattggaaaaggacaatagtacaatt 10249842  T
Q  354 gtacaaccac 363  Q
    ||||||||||    
T  10249841 gtacaaccac 10249832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 17812280 - 17812344
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatcc 319  Q
    ||||| ||||||||  || ||||||| |||||||||| |||||||||| ||||||||||||||||    
T  17812280 agaagaaatagaagtttggagcaacggctatttcagaggaattagaaggcattggatgcttatcc 17812344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 224
Target Start/End: Complemental strand, 18776343 - 18776147
Alignment:
Q  40 tcaagtattggttctgaaagaacaaaagagagcaaatgagt-tactaaaggaagcttatgttgcaagagagagtatgaagactgccagagtctggagacc 138  Q
    |||| |||| ||||||| ||||||||||||||||||  | | ||| |||||||||||||||||||||| ||||| ||||||||   ||||| || |||||    
T  18776343 tcaaatatttgttctgatagaacaaaagagagcaaagtaatctac-aaaggaagcttatgttgcaagacagagtctgaagactaagagagtttgaagacc 18776245  T
Q  139 ataagaagctgacgtcatcaagc------------gtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagtta 224  Q
    || ||||| |||| ||   ||||            |||| || |||||||||||||||| ||||| |||||||||||| | |||||| ||||||||||    
T  18776244 atcagaaggtgacttccagaagccgacgtcagagagtctaaaaatcatcagaagctgaaattcattagagtctgaagattggaagctgcagttagtta 18776147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 328
Target Start/End: Complemental strand, 11915814 - 11915757
Alignment:
Q  271 tgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagag 328  Q
    ||||||||||||||||||| ||| ||| |||| |||||||||||||| | ||||||||    
T  11915814 tgaagcaacgactatttcaaatggatttgaaggcattggatgcttattctttgaagag 11915757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 16324240 - 16324331
Alignment:
Q  14 agacaaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagttact-aaaggaagcttatgttgcaaga 106  Q
    ||||||||| ||||||||| |||||| ||| |||||||| |||||||||||| |||||||| |||  | || ||||||||||| ||||||||||    
T  16324240 agacaaaaagttataagtctttaatt-caaatattggttttgaaagaacaaatgagagcaa-tgaaattctcaaaggaagcttgtgttgcaaga 16324331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 17526392 - 17526458
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccat 321  Q
    |||||||||||||| |||| | ||| | |||||  || |||||||||| ||||||||||||||||||    
T  17526392 agaaggaatagaagactgatggaacaaatatttttgaagaattagaaggcattggatgcttatccat 17526458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 19888858 - 19888917
Alignment:
Q  14 agacaaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaa 74  Q
    |||||| | ||| |||||| |||||| |||||||| |||||||||||||||| ||||||||    
T  19888858 agacaatattttttaagtctttaatt-caagtattagttctgaaagaacaaatgagagcaa 19888917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 315
Target Start/End: Original strand, 41114767 - 41114811
Alignment:
Q  271 tgaagcaacgactatttcagatgaattagaagtcattggatgctt 315  Q
    |||||||||| |||||||| ||||||| |||| ||||||||||||    
T  41114767 tgaagcaacggctatttcaaatgaatttgaaggcattggatgctt 41114811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 174 - 399
Target Start/End: Complemental strand, 20281 - 20056
Alignment:
Q  174 tcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctga 273  Q
    |||||||||||||||||  |||||||||||||| ||||||  |||||||||||  |||||||||||||  || || | || ||||||||| |||||||      
T  20281 tcagaagctgaagttcaatagagtctgaagactggaagctggagttagttaaaagttgttattttgaactcatatgattgcagaaggaatggaagcctag 20182  T
Q  274 agcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactccgtta 373  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||  ||    
T  20181 agcaacgactatttcagaagaattagaaagcattggatgcttatccattgaagagcgcaggaaaaggacatagtacaattgtacaaccacttctccacta 20082  T
Q  374 ctccactcttcatgtctgcaatagta 399  Q
    |||||||| ||| || |||| |||||    
T  20081 ctccactcctcaagtttgcagtagta 20056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 2e-56; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 16 - 399
Target Start/End: Original strand, 9063950 - 9064347
Alignment:
Q  16 acaaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaagagagagtatg 115  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||||| |||||| |   | ||   ||| |||||||||||||||||| ||||||||    
T  9063950 acaaaaatttataagtc-ttaaactcaagtattggttctgaaagaacaaatgagagctatgaaatttacaaaagaagcttatgttgcaagacagagtatg 9064048  T
Q  116 aagactgccagagtctggagaccat--------------aagaagctgacgtcatca-agcgtctgaagatcatcagaagctgaagttcatcagagtctg 200  Q
    |||||    ||| |||  |||||||              |||||||||| ||||||| || ||||||||| | | |||||||| ||||||||| ||||||    
T  9064049 aagacaaagagattctaaagaccatcagaagctgaatgcaagaagctgatgtcatcagagagtctgaagagccttagaagctggagttcatcatagtctg 9064148  T
Q  201 aagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattaga 300  Q
    ||||||  |||||  |||||||||||  |||||||| ||||  || |||| |||||||||||| |||||||| ||||||||||||||  || ||||||||    
T  9064149 aagactgaaagctggagttagttaaaagttgttattctgaattcatatcattgtagaaggaatggaagcctggagcaacgactatttatgaggaattaga 9064248  T
Q  301 agtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactccgttactccactcttcatgtctgcaatagta 399  Q
    || ||||| ||||||||||| ||||||| |||  ||||| |||||||||||||||||||||| ||||||  |||||||||| |||||| |||| |||||    
T  9064249 aggcattgaatgcttatccactgaagagcgcagaaaaagaacatagtacaattgtacaaccattactccactactccactcctcatgtttgcagtagta 9064347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 148 - 367
Target Start/End: Original strand, 16307648 - 16307868
Alignment:
Q  148 tgacgtcatca-agcgtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacac 246  Q
    ||||||||||| || |||| |||| | |||||||||| |||||||||||||||||| ||| ||||||  |||||||||||  |||||||| ||||   |     
T  16307648 tgacgtcatcatagagtctaaagaacctcagaagctggagttcatcagagtctgaaaactggaagctggagttagttaaaagttgttattctgaatgtat 16307747  T
Q  247 atcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatag 346  Q
    |||| | |||||||||| |||||||| |||||||||||||| |||||||||||||| ||||||||||||||||| |||||||  || |||||||||||||    
T  16307748 atcattatagaaggaatggaagcctggagcaacgactattttagatgaattagaaggcattggatgcttatccactgaagagcacaggaaaaggacatag 16307847  T
Q  347 tacaattgtacaaccactact 367  Q
    |||||||||||||||||||||    
T  16307848 tacaattgtacaaccactact 16307868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 171 - 399
Target Start/End: Original strand, 13172296 - 13172525
Alignment:
Q  171 tcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcc 270  Q
    |||| ||||| ||||| ||||||||  |||||||||  |||||  |||||||||||| |||||||||| ||  ||||||| |||| ||||| ||||||||    
T  13172296 tcattagaagatgaagatcatcagaagctgaagactgaaagctgaagttagttaaatgttgttatttttaatgcacatcattgtaaaaggagtagaagcc 13172395  T
Q  271 tgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccacta-ctcc 369  Q
    || ||||||||||||||||||  ||||||||| ||||||||||||||||| |  |||  |||||||| ||||||||||||||||||||||||||| ||||    
T  13172396 tggagcaacgactatttcagagtaattagaaggcattggatgcttatccacttgagatcgcatgaaatggacatagtacaattgtacaaccactacctcc 13172495  T
Q  370 gttactccactcttcatgtctgcaatagta 399  Q
      |||||||||| |||| ||||||||||||    
T  13172496 actactccactcctcatatctgcaatagta 13172525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 181 - 365
Target Start/End: Original strand, 18361536 - 18361720
Alignment:
Q  181 ctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacg 280  Q
    ||||||||||||||||||||||| | |||||||  ||||||||| | || ||||| |||||||||||| | |||||||||||||||||| |||||||||     
T  18361536 ctgaagttcatcagagtctgaagtcaagaagctggagttagttacagttggttatcttgaagacacatgattgtagaaggaatagaagcttgaagcaaca 18361635  T
Q  281 actatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaattgtacaaccacta 365  Q
    ||||||||||| |||||||||| |||| |||||||||||| | || || ||| | ||||||| |||||||||||||||||||||||    
T  18361636 actatttcagaggaattagaaggcattagatgcttatccactaaaaagcgca-ggaaaggacaatagtacaattgtacaaccacta 18361720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 219 - 369
Target Start/End: Original strand, 18047827 - 18047977
Alignment:
Q  219 tagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatc 318  Q
    ||||||||  |||||||| ||||||||||||| ||||||||||||| ||||||  ||||| |  ||||||||| |||||||||| ||||| |||||||||    
T  18047827 tagttaaaggttgttattctgaagacacatcattgtagaaggaataaaagcctagagcaatggatatttcagaggaattagaaggcattgaatgcttatc 18047926  T
Q  319 cattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactcc 369  Q
    |  ||||||| ||| |||||| |||||||||||||||||||| ||||||||    
T  18047927 ctctgaagagcgcaagaaaagaacatagtacaattgtacaacaactactcc 18047977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 255 - 369
Target Start/End: Original strand, 16105022 - 16105137
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaatt 353  Q
    |||||||||| ||||||| |||||||||||||| | | |||||||||| ||||||||||||||||||||||||| ||| ||||| ||| ||| |||||||    
T  16105022 agaaggaatataagcctggagcaacgactattttataggaattagaaggcattggatgcttatccattgaagagcgcaagaaaatgacaatattacaatt 16105121  T
Q  354 gtacaaccactactcc 369  Q
    ||||||||| ||||||    
T  16105122 gtacaaccattactcc 16105137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 255 - 369
Target Start/End: Complemental strand, 5035504 - 5035390
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattg 354  Q
    |||||||||| ||||||| | ||||| ||||||||||| ||||||||| ||||||||||||||||| ||||||| | | ||||| |||||||||||||||    
T  5035504 agaaggaataaaagcctggaacaacgcctatttcagataaattagaaggcattggatgcttatccactgaagagcgtaggaaaatgacatagtacaattg 5035405  T
Q  355 tacaaccactactcc 369  Q
    || ||||| ||||||    
T  5035404 tataaccattactcc 5035390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 171 - 365
Target Start/End: Original strand, 7487850 - 7488043
Alignment:
Q  171 tcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcc 270  Q
    |||||||||||||||| ||||||||   |||||||||||||||  |||||||||||| |||| |||  ||      |||| ||||||||||||| || ||    
T  7487850 tcatcagaagctgaagatcatcagaagttgaagactagaagctgaagttagttaaatgttgtcattcagattgtgtatcattgtagaaggaataaaa-cc 7487948  T
Q  271 tgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaagg-acatagtacaattgtacaaccacta 365  Q
    || ||||| ||||| |||||| || || |||| ||||||||||||||||| ||||||| ||| ||||||| | ||||||||| |||||||||||||    
T  7487949 tggagcaatgactaattcagaggattttgaaggcattggatgcttatccactgaagagcgca-gaaaaggaaaatagtacaactgtacaaccacta 7488043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 255 - 362
Target Start/End: Complemental strand, 16412124 - 16412015
Alignment:
Q  255 agaaggaata-gaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaat 352  Q
    |||||||||| |||||||| ||||||||||||||||||  ||||  ||| |||||||||||||| | |||||||| |   ||||||||| ||||||||||    
T  16412124 agaaggaataagaagcctggagcaacgactatttcagagaaattgaaaggcattggatgcttattctttgaagagcgttcgaaaaggacaatagtacaat 16412025  T
Q  353 tgtacaacca 362  Q
    ||||||||||    
T  16412024 tgtacaacca 16412015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 46 - 158
Target Start/End: Original strand, 18047705 - 18047817
Alignment:
Q  46 attggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaagagagagtatgaagactgccagagtctggagaccataagaa 145  Q
    ||||||||||||||||||||||||| |||| || ||   ||||||||||| |||||||||| | ||| |||| | ||||||||| || ||||||| ||||    
T  18047705 attggttctgaaagaacaaaagagaacaaaggaatttacaaaggaagcttgtgttgcaagacatagtctgaaaattgccagagtttgaagaccatcagaa 18047804  T
Q  146 gctgacgtcatca 158  Q
    ||| || ||||||    
T  18047805 gctaacatcatca 18047817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 14114166 - 14114102
Alignment:
Q  256 gaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatcca 320  Q
    ||||||||||||| ||| |||||  |||||||||||||||||||||| |||| ||||||||||||    
T  14114166 gaaggaatagaagactggagcaaaaactatttcagatgaattagaaggcattagatgcttatcca 14114102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 14423816 - 14423752
Alignment:
Q  256 gaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatcca 320  Q
    ||||||||||||| ||| |||||  |||||||||||||||||||||| |||| ||||||||||||    
T  14423816 gaaggaatagaagactggagcaaaaactatttcagatgaattagaaggcattagatgcttatcca 14423752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 252 - 380
Target Start/End: Complemental strand, 16412857 - 16412737
Alignment:
Q  252 tgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtg-catgaaaaggaca-tagtac 349  Q
    ||||||||||||||||||| | |||||||||||||||||| |||||          |||||||||||||||||||| || ||   |||||||| ||||||    
T  16412857 tgtagaaggaatagaagccaggagcaacgactatttcagaggaatt----------ggatgcttatccattgaagaatgtcagtgaaaggacaatagtac 16412768  T
Q  350 aattgtacaaccactactccgttactccact 380  Q
    |||||||||||||| |||||  |||||||||    
T  16412767 aattgtacaaccacaactccactactccact 16412737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 320
Target Start/End: Original strand, 2501092 - 2501160
Alignment:
Q  252 tgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatcca 320  Q
    ||||||||||||||||| ||| |||||||| |||||| || |||||||||| ||||| || ||||||||    
T  2501092 tgtagaaggaatagaagactggagcaacgaatatttctgaagaattagaaggcattgaattcttatcca 2501160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 5035548 - 5035510
Alignment:
Q  167 aagatcatcagaagctgaagttcatcagagtctgaagac 205  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  5035548 aagatcatcagaagctgaagttcatcaaagtctgaagac 5035510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 4550002 - 4549969
Alignment:
Q  42 aagtattggttctgaaagaacaaaagagagcaaa 75  Q
    ||||||||||||||||||||||||||||||||||    
T  4550002 aagtattggttctgaaagaacaaaagagagcaaa 4549969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 255 - 316
Target Start/End: Original strand, 11572281 - 11572342
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgctta 316  Q
    |||||||||||||| ||||||||||   ||||||||| |||||||||| ||||| |||||||    
T  11572281 agaaggaatagaagactgaagcaacagatatttcagaggaattagaaggcattgtatgctta 11572342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 255 - 320
Target Start/End: Original strand, 15871124 - 15871189
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatcca 320  Q
    |||||||||||||| ||| |||||| | | |||| || |||||||||| |||||||||||||||||    
T  15871124 agaaggaatagaagactggagcaacaaatttttctgaagaattagaaggcattggatgcttatcca 15871189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 16472813 - 16472745
Alignment:
Q  252 tgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatcca 320  Q
    |||| |||||||||||| ||| || ||||||| ||||| | | |||||||| |||||||||||||||||    
T  16472813 tgtataaggaatagaagactggagtaacgactttttcaaaggcattagaaggcattggatgcttatcca 16472745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 16307519 - 16307585
Alignment:
Q  40 tcaagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaaga 106  Q
    |||||||||||||||| ||||||||| ||||||||  || ||   ||||||||||| ||||||||||    
T  16307519 tcaagtattggttctggaagaacaaatgagagcaatggaatttacaaaggaagcttgtgttgcaaga 16307585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 18361436 - 18361468
Alignment:
Q  42 aagtattggttctgaaagaacaaaagagagcaa 74  Q
    ||||||||||||| |||||||||||||||||||    
T  18361436 aagtattggttctaaaagaacaaaagagagcaa 18361468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1026 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 40 - 399
Target Start/End: Complemental strand, 3314 - 2954
Alignment:
Q  40 tcaagtattggttctgaaagaacaaaagagagcaaatgagt-tactaaaggaagcttatgttgcaagagagagtatgaagactgccagagtctggagacc 138  Q
    ||||||||||||||||||||||||||| |||||||| ||   ||| |||| |||||| |||  ||||| ||||| |||||||    |||||||| |||||    
T  3314 tcaagtattggttctgaaagaacaaaatagagcaaaggaaactacaaaag-aagcttgtgt--caagacagagtctgaagacaaagagagtctgaagacc 3218  T
Q  139 ataagaagctgacgtcatca-agcgtctgaagatc-atcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttatt 236  Q
    || |||||||||||||| || || ||||||||| | ||||| ||||  |||||||||||||||||||| | ||||||  | | |||| ||  ||||||||    
T  3217 atcagaagctgacgtcagcagagagtctgaagaaccatcaggagctagagttcatcagagtctgaagattggaagctgaaatcagttcaaagttgttatt 3118  T
Q  237 ttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaa 336  Q
     ||||| |  |||| ||||||||| || ||||| ||||||||||||| ||| ||| |||||||||  ||||||||||||||||| | |||||  || |||    
T  3117 ctgaagtctgatcattgtagaaggtatggaagcttgaagcaacgactgttttagaggaattagaatgcattggatgcttatccactaaagagctcaagaa 3018  T
Q  337 aaggacatagtacaattgtacaaccacta-ctccgttactccactcttcatgtctgcaatagta 399  Q
    ||||||||||| ||||||||||||||| | |||| ||||| ||||||||||| |||||||||||    
T  3017 aaggacatagtgcaattgtacaaccacaacctccattacttcactcttcatggctgcaatagta 2954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 1e-51; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 142 - 369
Target Start/End: Complemental strand, 24158074 - 24157844
Alignment:
Q  142 agaagctgacgtcatca-agcgtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttga 240  Q
    ||||||||||||||||| ||  |||||||| | ||| |||||| |||||||||||||||||||||| ||||||  |||||||||||  |||||||| |||    
T  24158074 agaagctgacgtcatcagagaatctgaagaacctcaaaagctggagttcatcagagtctgaagactggaagctgaagttagttaaaagttgttattctga 24157975  T
Q  241 agacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatg--aaaa 338  Q
    |  || |||| |||||||||||| |||||||| |||||||||||||| ||| |||||||||| ||||||||||||||||| ||||||| | | |  ||||    
T  24157974 atgcatatcattgtagaaggaatggaagcctggagcaacgactattttagaggaattagaagacattggatgcttatccactgaagagcgtaggaaaaaa 24157875  T
Q  339 ggacatagtacaattgtacaaccactactcc 369  Q
    ||| |||||||||||| ||||||||||||||    
T  24157874 ggatatagtacaattgcacaaccactactcc 24157844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 171 - 399
Target Start/End: Original strand, 24440621 - 24440849
Alignment:
Q  171 tcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcc 270  Q
    |||||||||| || ||||||||||||||||||||||||||  |  |||| |||| |  |||||| | |||| ||  || | || ||||||||||||||||    
T  24440621 tcatcagaagatggagttcatcagagtctgaagactagaacatgaagtttgttagaagttgttaatctgaacacgtatgattgcagaaggaatagaagcc 24440720  T
Q  271 tgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccacta-ctcc 369  Q
    || ||||||  |||||||||| |||||||||| ||||||||| ||||||| ||||||| |||| ||||||||||||||||||||||||||||||| ||||    
T  24440721 tggagcaactgctatttcagaggaattagaaggcattggatgtttatccactgaagagcgcat-aaaaggacatagtacaattgtacaaccactacctcc 24440819  T
Q  370 gttactccactcttcatgtctgcaatagta 399  Q
      ||||||||||||||||||||||||||||    
T  24440820 actactccactcttcatgtctgcaatagta 24440849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 162 - 369
Target Start/End: Complemental strand, 22383692 - 22383484
Alignment:
Q  162 gtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaagga 261  Q
    ||||||||||||||||||||| ||| ||| |||||||||||| ||  |||||| |||||||||||  |||||||| |||||||| |||| ||||||||||    
T  22383692 gtctgaagatcatcagaagctaaaggtcaacagagtctgaaggctgcaagctagagttagttaaaagttgttattctgaagacatatcattgtagaagga 22383593  T
Q  262 atagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaattgtacaac 360  Q
    || ||||||   ||||||| |||||| ||| |||||||||| ||||||||||||||||| | ||||| |||| |||||||| |||||| | |||||||||    
T  22383592 atggaagccgtgagcaacggctattttagaggaattagaaggcattggatgcttatccactaaagagcgcataaaaaggacaatagtatatttgtacaac 22383493  T
Q  361 cactactcc 369  Q
    |||||||||    
T  22383492 cactactcc 22383484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 192 - 399
Target Start/End: Complemental strand, 21846338 - 21846130
Alignment:
Q  192 cagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcaga 291  Q
    ||||||||||||||| ||||||  |||||||||||  |||||||| ||||  || |||| || ||||||||| |||||||  |||||||||||||||| |    
T  21846338 cagagtctgaagactggaagctgaagttagttaaaagttgttattctgaatgcatatcattgcagaaggaatggaagcctagagcaacgactatttcaaa 21846239  T
Q  292 tgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccacta-ctccgttactccactcttcatgtct 390  Q
     |||||||||| |||| ||||| |||||| | || || ||| |||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  21846238 ggaattagaaggcatttgatgcatatccacttaaaagcgcaagaaaaggacatagtacaattgtacaaccactacctccattactccactcctcatgtct 21846139  T
Q  391 gcaatagta 399  Q
    ||| |||||    
T  21846138 gcagtagta 21846130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 189 - 363
Target Start/End: Original strand, 21910980 - 21911154
Alignment:
Q  189 catcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttc 288  Q
    ||||| ||||||||| | ||||| | || ||||||||| ||||||||| | |||||||||||   ||||||||||||||||||| ||||||||| ||||     
T  21910980 catcaaagtctgaagccaagaagatgcaattagttaaagtttgttattctaaagacacatcaaattagaaggaatagaagcctggagcaacgacgatttt 21911079  T
Q  289 agatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccac 363  Q
    |||  ||||||||| |||| |||||||||||| | ||||||||| ||||||||||||||||||||||||||||||    
T  21911080 agagaaattagaaggcatttgatgcttatccactaaagagtgcaggaaaaggacatagtacaattgtacaaccac 21911154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 171 - 366
Target Start/End: Complemental strand, 20568347 - 20568152
Alignment:
Q  171 tcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcc 270  Q
    |||||||||| ||||| |||||||| |||||||||| ||||||  |||||||||||| |||| |||| ||   ||||||| |||||||||||||||||||    
T  20568347 tcatcagaaggtgaagatcatcagaatctgaagactggaagctgaagttagttaaatgttgtcattt-gattgcacatcattgtagaaggaatagaagcc 20568249  T
Q  271 tgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaattgtacaaccactac 366  Q
    || ||||||| |||||| | | |||||||||| ||||||||||||||||  | |||||     ||||||||| ||||||||||||||||||||||||    
T  20568248 tggagcaacggctattttataggaattagaaggcattggatgcttatccgctaaagagcaatggaaaaggacaatagtacaattgtacaaccactac 20568152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 237 - 369
Target Start/End: Original strand, 15668508 - 15668641
Alignment:
Q  237 ttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaa 336  Q
    |||||||||||  |||| |||||||||| |||| |||||||||| ||||||||||||||||| ||| ||||||||||||||||| ||||||  | |  ||    
T  15668508 ttgaagacacaagactgcagaaggaatataagcttgaagcaacggctatttcagatgaattaaaaggcattggatgcttatccactgaagaccgaagaaa 15668607  T
Q  337 aaggac-atagtacaattgtacaaccactactcc 369  Q
     ||||| |||||||||||||||| ||||||||||    
T  15668608 taggacaatagtacaattgtacacccactactcc 15668641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 243 - 365
Target Start/End: Original strand, 10896391 - 10896514
Alignment:
Q  243 acacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac 342  Q
    |||||||| ||||||| |||||||| |||| ||||||| |||||||||| |||||||||| |||||||||||||| |   |||||| |   |||||||||    
T  10896391 acacatcattgtagaaagaatagaatcctggagcaacggctatttcagaagaattagaaggcattggatgcttattcgccgaagagcgttagaaaaggac 10896490  T
Q  343 -atagtacaattgtacaaccacta 365  Q
     |||||||||||||||||||||||    
T  10896491 aatagtacaattgtacaaccacta 10896514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 255 - 369
Target Start/End: Complemental strand, 25918772 - 25918657
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaatt 353  Q
    |||||||||||||| ||| ||||| | |||  ||||| |||||||||| ||||||||||||||||| | ||||| |||  | |||||| |||||||||||    
T  25918772 agaaggaatagaagtctggagcaatgtctacatcagaggaattagaaggcattggatgcttatccactaaagagcgcagtagaaggacaatagtacaatt 25918673  T
Q  354 gtacaaccactactcc 369  Q
    ||||||||||||||||    
T  25918672 gtacaaccactactcc 25918657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 255 - 365
Target Start/End: Complemental strand, 24844262 - 24844151
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaatt 353  Q
    |||| ||||||||||||| |||||||||||||||||| || || |||| |||||||||| ||| | ||| ||||     ||||||||| |||||||||||    
T  24844262 agaaagaatagaagcctggagcaacgactatttcagaggagttggaaggcattggatgcctattctttggagagccttggaaaaggacaatagtacaatt 24844163  T
Q  354 gtacaaccacta 365  Q
    ||||||||||||    
T  24844162 gtacaaccacta 24844151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 369
Target Start/End: Original strand, 33705983 - 33706099
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtg--catgaaaagga-catagtacaa 351  Q
    |||| ||||||||| ||||||||||||||||||||||  ||||||||| | |||||||||||||||  | ||| ||  |||  ||||||  |||||||||    
T  33705983 agaatgaatagaagactgaagcaacgactatttcagagaaattagaaggctttggatgcttatccacag-agaatggacattgaaaggataatagtacaa 33706081  T
Q  352 ttgtacaaccactactcc 369  Q
    ||||||||||||||||||    
T  33706082 ttgtacaaccactactcc 33706099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 316
Target Start/End: Original strand, 14793967 - 14794031
Alignment:
Q  252 tgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgctta 316  Q
    ||||||||||| ||||||||| |||||||||||||||||| |||||| ||| ||||| |||||||    
T  14793967 tgtagaaggaacagaagcctggagcaacgactatttcagaggaattataagacattgcatgctta 14794031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 327
Target Start/End: Original strand, 19320362 - 19320453
Alignment:
Q  236 tttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaaga 327  Q
    ||||||||||| | | || |||||||||||||| ||  ||||||  |||||||||| |||||||||| |||||||||||||| || ||||||    
T  19320362 tttgaagacacgtgattgcagaaggaatagaaggctagagcaacagctatttcagaggaattagaaggcattggatgcttatacactgaaga 19320453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 27640215 - 27640281
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccat 321  Q
    |||||||||||||| ||||| ||| || |||||  || || ||||||| ||||||||||||||||||    
T  27640215 agaaggaatagaagactgaaacaaggaatatttttgaagagttagaaggcattggatgcttatccat 27640281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 22683561 - 22683493
Alignment:
Q  252 tgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatcca 320  Q
    ||||||||||||| ||  ||  |||||||||||||||| | ||| |||||| ||||| |||||||||||    
T  22683561 tgtagaaggaatataaaactagagcaacgactatttcaaaggaaatagaaggcattgaatgcttatcca 22683493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 101; Significance: 7e-50; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 134 - 399
Target Start/End: Original strand, 735 - 1003
Alignment:
Q  134 agaccataagaagctgacgtcatca-agcgtctgaagatc-atcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttg 231  Q
    ||||||| ||||||||||||||||| || || |||||| | |||||||| || ||||||| |||||||||||||| ||||||  |||||||||||| |||    
T  735 agaccatcagaagctgacgtcatcagagagtttgaagaaccatcagaagttggagttcataagagtctgaagactggaagctgaagttagttaaatgttg 834  T
Q  232 ttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgc 331  Q
    ||||| || |  || |||| || | ||||||| ||||| || |||||| ||||||||||| || ||||||| ||||||||||||||||| |||||||  |    
T  835 ttattctgtatgcatatcattgcataaggaatggaagcttggagcaacaactatttcagaggatttagaagacattggatgcttatccactgaagagcac 934  T
Q  332 atgaaaaggacatagtacaattgtacaaccacta-ctccgttactccactcttcatgtctgcaatagta 399  Q
    ||||||||| |||||||||||||||||||||||| ||||  |||||||||  |||||||| || |||||    
T  935 atgaaaagggcatagtacaattgtacaaccactacctccactactccacttatcatgtctacagtagta 1003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 184 - 437
Target Start/End: Complemental strand, 4472 - 4219
Alignment:
Q  184 aagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgact 283  Q
    |||||||||||||||||||| | |||||||  ||||||||||| || ||||||| ||| |||||  | |  |||||||||| ||||||| ||||||||||    
T  4472 aagttcatcagagtctgaagtcaagaagctggagttagttaaagttggttattt-gaaaacacaagatttcagaaggaataaaagcctggagcaacgact 4374  T
Q  284 atttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaattgtacaaccactactccgttactccactct 382  Q
    |||||||| |||||||||| |||| |||||||||||| ||||||  ||| ||||| ||| |||||||||||||||||||||||||||  ||||||||||     
T  4373 atttcagaggaattagaaggcatttgatgcttatccactgaagaacgcaggaaaatgacaatagtacaattgtacaaccactactccactactccactc- 4275  T
Q  383 tcatgtctgca-atagtattgatatagttgtgtctacgctggtgaattgtccaaac 437  Q
    || | |||||| |||||| || |||||||||||||| |||||| |||| |||||||    
T  4274 tcttatctgcatatagtactgttatagttgtgtctatgctggttaattctccaaac 4219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 14 - 369
Target Start/End: Original strand, 3746 - 4114
Alignment:
Q  14 agacaaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaagagagagta 113  Q
    ||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||   | |||  ||||  |||||||||||||||| | | |     
T  3746 agacaaaaatttataagtc-ttaatttcaagtattagttctggaagaacaaaagagagcaatgaaattaacaaagttagcttatgttgcaagacataatc 3844  T
Q  114 tgaagactgccagagtctggagaccataagaagc--------------tgacgtcatcaagcgtctgaagatcatcagaagctgaagttcatcagagtct 199  Q
    |||| ||  | |||||||  ||||||| ||||||              ||||||||| ||||||||||||| ||||| |   |||||||||||||||||     
T  3845 tgaaaaccactagagtctaaagaccatcagaagctgactgcaaaaagctgacgtcattaagcgtctgaagaccatcatagtgtgaagttcatcagagtcg 3944  T
Q  200 gaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattag 299  Q
    |||| | ||||| | |||||||||||| || |||||| ||||||||||  | || ||||||||||||||  || || |||| |||||||| | |||||||    
T  3945 gaagtcaagaagttgcagttagttaaagttagttattatgaagacacaagattgcagaaggaatagaagtttggaggaacggctatttcataggaattag 4044  T
Q  300 aagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactcc 369  Q
    |||  ||| |||| |||||| |||||||| |||  |||||||||||||||||||||||||||||||||||    
T  4045 aaggaatttgatgtttatcctttgaagagcgcagaaaaaggacatagtacaattgtacaaccactactcc 4114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 142 - 399
Target Start/End: Original strand, 10269 - 10529
Alignment:
Q  142 agaagctgacgtcatca-agcgtctgaagatc-atcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttg 239  Q
    ||||||||||||||||  || ||||||||| | || |||||||| ||||||||||||||| |||||| ||||||  |||||||||||| |||||||| |     
T  10269 agaagctgacgtcatcggagagtctgaagaaccattagaagctggagttcatcagagtctaaagactggaagctgaagttagttaaatgttgttattctt 10368  T
Q  240 aagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaag 339  Q
    ||  || |||| ||  ||||||||  |||||   ||||||||||||||||||  ||||||||| ||||||||| ||||||| |||| || ||| ||||||    
T  10369 aatgcatatcattgcggaaggaatgcaagccgagagcaacgactatttcagagaaattagaaggcattggatgtttatccactgaaaagcgcaggaaaag 10468  T
Q  340 gacatagtacaattgtacaaccacta-ctccgttactccactcttcatgtctgcaatagta 399  Q
    || ||||||||||||||||||||||| ||||  |||||||||| ||||||||||| |||||    
T  10469 gatatagtacaattgtacaaccactacctccactactccactcctcatgtctgcagtagta 10529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 87; Significance: 2e-41; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 14 - 399
Target Start/End: Complemental strand, 112574 - 112196
Alignment:
Q  14 agacaaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaagagagagta 113  Q
    |||||||| |||||||||| |||| |  || ||||||||||||||||||||||||||  ||  || ||   |||||||||||||||||||||   ||||     
T  112574 agacaaaattttataagtc-ttaaatcaaaatattggttctgaaagaacaaaagagataaatggaatttgcaaaggaagcttatgttgcaagtttgagtc 112476  T
Q  114 tgaagactgccagagtctggagac-cataagaagctgacgtcatcaagcgtctgaagatcatca-gaagctgaagttcatcagagtctgaagactagaag 211  Q
    |||||||   ||||||||| |||  ||| ||||||||||  |  |||  |||||| | |||||| | | |||||| |||| ||||||||||| | |||||    
T  112475 tgaagaccatcagagtctgaagattcatcagaagctgactgc--caaa-gtctgacg-tcatcaagcatctgaagatcatgagagtctgaagtcaagaag 112380  T
Q  212 ctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggat 311  Q
     | |||||||||||| || |||||| ||||||||||  | || |||||||||| |||||| ||||||||  |||||| || |||||||||| ||||||||    
T  112379 ttgcagttagttaaagttagttattatgaagacacaagattgcagaaggaataaaagcctaaagcaacggatatttctgaggaattagaaggcattggat 112280  T
Q  312 gcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccactactccgttactccactcttcatgtctgcaatagta 399  Q
    ||   |||| ||||||| ||| |||||||||||||||||||| |||||||||||||||  | |||||||| |||||||| ||||||||    
T  112279 gc---tccactgaagagcgcaggaaaaggacatagtacaattttacaaccactactccactcctccactc-tcatgtctacaatagta 112196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 116154 - 116094
Alignment:
Q  45 tattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaag 105  Q
    ||||||||||||||||| ||||||||||||  || ||   |||||||||||||||||||||    
T  116154 tattggttctgaaagaagaaaagagagcaatggaatttgcaaaggaagcttatgttgcaag 116094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 142 - 351
Target Start/End: Complemental strand, 7570 - 7360
Alignment:
Q  142 agaagctgacgtcatca-agcgtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttga 240  Q
    ||||||||  ||||||| || ||||||||| | ||||||||||||||||| |||||||| |||||| ||||||| |||||||||||  ||||||||||||    
T  7570 agaagctggtgtcatcagagagtctgaagagcctcagaagctgaagttcaacagagtctaaagactggaagctagagttagttaaaagttgttattttga 7471  T
Q  241 agacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaagg 340  Q
    |  || || | || ||||||||| |||||||  | || ||||||||||||| |||||||||  ||||||||||||||||||||||||| ||| ||| ||     
T  7470 attcatatgattgcagaaggaatggaagcctagaacagcgactatttcagaagaattagaaagcattggatgcttatccattgaagagcgcaggaataga 7371  T
Q  341 acatagtacaa 351  Q
    |||| ||||||    
T  7370 acattgtacaa 7360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 188 - 399
Target Start/End: Complemental strand, 59756 - 59545
Alignment:
Q  188 tcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaagacacatcactgtagaaggaatagaagcctgaagcaacgactattt 287  Q
    ||||||||  |||||||||||||| |  ||||||||||||  ||||||| | | | || || | |||||||||||| |||||||| ||||||||||||||    
T  59756 tcatcagaagctgaagactagaagatgaagttagttaaatgatgttattctaatg-catatgattgtagaaggaatggaagcctggagcaacgactattt 59658  T
Q  288 cagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattgtacaaccacta-ctccgttactccactcttcat 386  Q
     ||| |||||||||| ||||||||| ||||||| ||||||| | |  |||||||||||||| || ||||||||||||| |||| ||| ||||||| |  |    
T  59657 tagaggaattagaaggcattggatggttatccaatgaagagcgtagaaaaaggacatagtataagtgtacaaccactacctccattattccactcctttt 59558  T
Q  387 gtctgcaatagta 399  Q
    |||| ||||||||    
T  59557 gtctacaatagta 59545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 63; Significance: 3e-27; HSPs: 3)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 238 - 398
Target Start/End: Original strand, 9217 - 9373
Alignment:
Q  238 tgaagacacatcactgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaa 337  Q
    ||||||||||  | || |||||||||| |||||| ||||||||  |||||| || |||||||||| |||||||||||   ||| ||||||| ||| ||||    
T  9217 tgaagacacaagattgcagaaggaataaaagcctaaagcaacggatatttctgaggaattagaaggcattggatgct---ccactgaagagcgcaggaaa 9313  T
Q  338 aggacatagtacaattgtacaaccactactccgttactccactcttcatgtctgcaatagt 398  Q
    |||||||||||||||| |||||||||||||||  | |||||||| |||||| |||||||||    
T  9314 aggacatagtacaattttacaaccactactccactcctccactc-tcatgtatgcaatagt 9373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 9018 - 9108
Alignment:
Q  14 agacaaaaatttataagtccttaatttcaagtattggttctgaaagaacaaaagagagcaaatgagttactaaaggaagcttatgttgcaag 105  Q
    |||||||| |||||||||| |||| |  |||||||||||||||||||||||||||||||||   | ||   |||||||||||||||||||||    
T  9018 agacaaaattttataagtc-ttaaatcaaagtattggttctgaaagaacaaaagagagcaatgaaatttgcaaaggaagcttatgttgcaag 9108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 9166 - 9223
Alignment:
Q  148 tgacgtcatcaagcgtctgaagatcatcagaagctgaagttcatcagagtctgaagac 205  Q
    |||||||||||||| | |||||| ||||| |  ||||||||||||||||| |||||||    
T  9166 tgacgtcatcaagcatttgaagaccatcaaagtctgaagttcatcagagtatgaagac 9223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 59; Significance: 8e-25; HSPs: 3)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 255 - 369
Target Start/End: Original strand, 3381 - 3495
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggacatagtacaattg 354  Q
    |||||||||||||||||  ||||| | |||||||||| |||||||||| |||| |||||||||||| | ||| |  || |||||| ||||||||||||||    
T  3381 agaaggaatagaagcctagagcaatggctatttcagaggaattagaaggcattcgatgcttatccactaaagggaacaggaaaagaacatagtacaattg 3480  T
Q  355 tacaaccactactcc 369  Q
    |||||||||||||||    
T  3481 tacaaccactactcc 3495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 238
Target Start/End: Original strand, 1763 - 1853
Alignment:
Q  148 tgacgtcatcaagcgtctgaagatcatcagaagctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttatttt 238  Q
    ||||||||||||| ||||||||| || ||||  |||||||||||| |||||| |||   |||||||  ||||||||||| || ||||||||    
T  1763 tgacgtcatcaagtgtctgaagaccagcagagtctgaagttcatctgagtctaaagtgaagaagctggagttagttaaagttagttatttt 1853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 2792 - 2730
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttat 317  Q
    |||| ||||| ||||||| |||||||||||||| ||| ||||| |||| |||||||| |||||    
T  2792 agaaagaataaaagcctggagcaacgactattttagaggaattggaaggcattggatacttat 2730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 255 - 369
Target Start/End: Original strand, 1816 - 1931
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggaca-tagtacaatt 353  Q
    |||||||||| |||||| ||| || |||||||||||| ||| |||||| |||| ||| |||||||| | ||||| |||||||||||||| ||||||| ||    
T  1816 agaaggaataaaagcctaaagaaatgactatttcagaggaaatagaaggcattagatacttatccactaaagagcgcatgaaaaggacactagtacattt 1915  T
Q  354 gtacaaccactactcc 369  Q
    ||| ||||||||||||    
T  1916 gtataaccactactcc 1931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 5e-17; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 255 - 362
Target Start/End: Complemental strand, 836 - 727
Alignment:
Q  255 agaaggaata-gaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaat 352  Q
    |||||||||| |||||||| ||||||||||||||||||  ||||  ||| |||||||||||||| | |||||||| |   ||||||||| ||||||||||    
T  836 agaaggaataagaagcctggagcaacgactatttcagagaaattgaaaggcattggatgcttattctttgaagagcgttcgaaaaggacaatagtacaat 737  T
Q  353 tgtacaacca 362  Q
    ||||||||||    
T  736 tgtacaacca 727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 416028 - 416083
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattgga 310  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  416028 agaaggaatagaagcctggagcaacgactatttcaaatgaattagaaggcattgga 416083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 252 - 380
Target Start/End: Complemental strand, 1569 - 1449
Alignment:
Q  252 tgtagaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtg-catgaaaaggaca-tagtac 349  Q
    ||||||||||||||||||| | |||||||||||||||||| |||||          |||||||||||||||||||| || ||   |||||||| ||||||    
T  1569 tgtagaaggaatagaagccaggagcaacgactatttcagaggaatt----------ggatgcttatccattgaagaatgtcagtgaaaggacaatagtac 1480  T
Q  350 aattgtacaaccactactccgttactccact 380  Q
    |||||||||||||| |||||  |||||||||    
T  1479 aattgtacaaccacaactccactactccact 1449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 415968 - 416030
Alignment:
Q  181 ctgaagttcatcagagtctgaagactagaagctacagttagttaaattttgttattttgaaga 243  Q
    |||||||| ||||||||||||||   |||||||| ||||||||||| || |||||||||||||    
T  415968 ctgaagtttatcagagtctgaagttaagaagctagagttagttaaagttggttattttgaaga 416030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1107 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold1107
Description:

Target: scaffold1107; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 327
Target Start/End: Original strand, 2339 - 2410
Alignment:
Q  256 gaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaaga 327  Q
    ||||||||| ||| |||||||||||||||||| ||| |||||||||| ||||||||||||| ||| ||||||    
T  2339 gaaggaatataagactgaagcaacgactattttagaggaattagaaggcattggatgcttacccactgaaga 2410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 16400 - 16470
Alignment:
Q  257 aaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaaga 327  Q
    |||||||||||| |||||||||||||||||| |||  ||||||||| ||||||||||||| ||| ||||||    
T  16400 aaggaatagaagactgaagcaacgactattttagagaaattagaaggcattggatgcttacccactgaaga 16470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 260 - 365
Target Start/End: Complemental strand, 29924 - 29818
Alignment:
Q  260 gaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgcatgaaaaggac-atagtacaattgtaca 358  Q
    ||||||||||||| ||||||||||| |||||||||||| |||| |||||||||||||| | ||| |||  |   ||||||||| ||||||||| || |||    
T  29924 gaatagaagcctggagcaacgactaattcagatgaattggaaggcattggatgcttattctttggagaacgttcgaaaaggacaatagtacaagtggaca 29825  T
Q  359 accacta 365  Q
    |||||||    
T  29824 accacta 29818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 255 - 380
Target Start/End: Original strand, 3284 - 3411
Alignment:
Q  255 agaaggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaagagtgc-atga-aaagga-catagtacaa 351  Q
    |||||||||| ||| ||| ||||| |||||||||||| ||||| |||| |||||||||||||||||  |||| | || | || ||||||  |||||| ||    
T  3284 agaaggaataaaagtctggagcaatgactatttcagaggaatttgaaggcattggatgcttatccacagaag-gagctaagagaaaggataatagtaaaa 3382  T
Q  352 ttgtacaaccactactccgttactccact 380  Q
    |||||||||||||||||| ||||||||||    
T  3383 ttgtacaaccactactccattactccact 3411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 378
Target Start/End: Complemental strand, 8202 - 8092
Alignment:
Q  270 ctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaag-agtgcatgaaaagga-catagtacaattgtacaaccactact 367  Q
    |||||||||||| ||||||||| |||||||||| ||||||||| ||||||| || || ||  |||  ||||||  |||||| ||||||||||||||||||    
T  8202 ctgaagcaacgattatttcagaggaattagaaggcattggatgattatccactggagaaggtcatagaaaggataatagtataattgtacaaccactact 8103  T
Q  368 ccgttactcca 378  Q
    ||  |||||||    
T  8102 ccactactcca 8092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 369
Target Start/End: Complemental strand, 5506 - 5394
Alignment:
Q  259 ggaatagaagcctgaagcaacgactatttcagatgaattagaagtcattggatgcttatccattgaa-gagtgcatgaaaaggac-atagtacaattgta 356  Q
    |||||||||||||| ||||||| ||| |||||| ||||| |||| ||||||||  ||||||| |||| |||  |    ||||||| ||||||||||||||    
T  5506 ggaatagaagcctggagcaacggctaattcagaggaatttgaaggcattggatatttatccagtgaaggagctcggagaaaggacaatagtacaattgta 5407  T
Q  357 caaccactactcc 369  Q
    |||||||||||||    
T  5406 caaccactactcc 5394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 317
Target Start/End: Complemental strand, 5746 - 5700
Alignment:
Q  271 tgaagcaacgactatttcagatgaattagaagtcattggatgcttat 317  Q
    ||||||||||||||||||| ||||||| |||| ||||||||||||||    
T  5746 tgaagcaacgactatttcaaatgaatttgaaggcattggatgcttat 5700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1050 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 1422 - 1488
Alignment:
Q  40 tcaagtattggttctgaaagaacaaaagagagcaaatgagt-tactaaaggaagcttatgttgcaaga 106  Q
    |||||||||||||| ||||| ||||||||||||||| || | ||| ||||||||||||||||| ||||    
T  1422 tcaagtattggttcagaaagtacaaaagagagcaaaggaatctac-aaaggaagcttatgttggaaga 1488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 78
Target Start/End: Complemental strand, 103925 - 103896
Alignment:
Q  49 ggttctgaaagaacaaaagagagcaaatga 78  Q
    ||||||||||||||||||||||||||||||    
T  103925 ggttctgaaagaacaaaagagagcaaatga 103896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University