View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14246_low_2 (Length: 531)

Name: NF14246_low_2
Description: NF14246
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14246_low_2
NF14246_low_2
[»] chr1 (45 HSPs)
chr1 (1-515)||(7743025-7743539)
chr1 (258-376)||(31794222-31794340)
chr1 (258-377)||(16893393-16893512)
chr1 (258-376)||(6122794-6122912)
chr1 (278-376)||(12259260-12259358)
chr1 (258-376)||(21547438-21547556)
chr1 (265-376)||(51814494-51814605)
chr1 (258-376)||(25297772-25297890)
chr1 (301-374)||(33700774-33700847)
chr1 (301-376)||(8904414-8904489)
chr1 (305-380)||(9165200-9165275)
chr1 (262-377)||(44961764-44961879)
chr1 (258-365)||(52336732-52336839)
chr1 (258-376)||(4566548-4566665)
chr1 (258-376)||(6650595-6650713)
chr1 (258-352)||(12587294-12587387)
chr1 (259-377)||(17745216-17745333)
chr1 (258-376)||(40257399-40257517)
chr1 (284-373)||(15786304-15786393)
chr1 (258-378)||(10526821-10526941)
chr1 (284-376)||(36371470-36371562)
chr1 (262-377)||(50901580-50901695)
chr1 (301-376)||(8177183-8177258)
chr1 (301-376)||(16169979-16170054)
chr1 (301-376)||(19528328-19528403)
chr1 (262-377)||(52116743-52116858)
chr1 (258-376)||(952511-952629)
chr1 (261-375)||(44126396-44126510)
chr1 (258-334)||(7219876-7219952)
chr1 (259-343)||(9879471-9879555)
chr1 (297-373)||(9964441-9964517)
chr1 (301-369)||(17410238-17410306)
chr1 (258-341)||(1600250-1600333)
chr1 (301-376)||(2799862-2799937)
chr1 (258-337)||(31383756-31383835)
chr1 (262-369)||(42983336-42983443)
chr1 (258-377)||(48619167-48619286)
chr1 (258-376)||(21267951-21268069)
chr1 (258-323)||(2220025-2220090)
chr1 (258-378)||(1094523-1094643)
chr1 (273-317)||(8254854-8254898)
chr1 (258-378)||(14787294-14787414)
chr1 (262-334)||(15065007-15065079)
chr1 (258-290)||(28180845-28180877)
chr1 (301-377)||(51703778-51703854)
[»] chr3 (44 HSPs)
chr3 (75-229)||(40864778-40864932)
chr3 (258-382)||(10499067-10499191)
chr3 (258-369)||(2667869-2667980)
chr3 (440-515)||(40864990-40865065)
chr3 (1-71)||(40864565-40864635)
chr3 (275-377)||(14186647-14186748)
chr3 (258-338)||(49397499-49397579)
chr3 (258-377)||(14339609-14339728)
chr3 (258-377)||(51903836-51903955)
chr3 (258-376)||(11642167-11642285)
chr3 (262-376)||(36720381-36720495)
chr3 (279-376)||(4222141-4222238)
chr3 (258-378)||(10445097-10445218)
chr3 (301-378)||(49494147-49494224)
chr3 (258-343)||(52769941-52770026)
chr3 (261-369)||(4844472-4844580)
chr3 (261-369)||(4870168-4870276)
chr3 (297-376)||(203090-203169)
chr3 (262-376)||(2597181-2597296)
chr3 (258-369)||(8075085-8075196)
chr3 (258-377)||(8170671-8170790)
chr3 (262-377)||(16991541-16991656)
chr3 (301-376)||(27093362-27093437)
chr3 (301-376)||(30311306-30311381)
chr3 (258-376)||(31520563-31520681)
chr3 (274-376)||(31788945-31789046)
chr3 (258-376)||(46518628-46518746)
chr3 (258-375)||(47454575-47454692)
chr3 (258-323)||(54990755-54990820)
chr3 (301-377)||(28703405-28703481)
chr3 (265-337)||(33899653-33899725)
chr3 (258-373)||(13808843-13808958)
chr3 (297-376)||(15048058-15048137)
chr3 (301-376)||(37788466-37788541)
chr3 (260-343)||(44743815-44743898)
chr3 (258-377)||(12761511-12761630)
chr3 (301-376)||(16354893-16354968)
chr3 (302-368)||(11612307-11612373)
chr3 (349-378)||(8796141-8796170)
chr3 (258-335)||(44069799-44069876)
chr3 (258-382)||(7673263-7673387)
chr3 (258-310)||(7973622-7973674)
chr3 (301-377)||(35111179-35111255)
chr3 (258-314)||(36015510-36015566)
[»] chr7 (43 HSPs)
chr7 (262-376)||(45709670-45709784)
chr7 (258-371)||(41519223-41519335)
chr7 (258-377)||(15137552-15137671)
chr7 (259-376)||(20335790-20335907)
chr7 (262-378)||(24513795-24513911)
chr7 (258-376)||(30579335-30579453)
chr7 (301-377)||(26459411-26459487)
chr7 (258-376)||(41487362-41487477)
chr7 (258-377)||(43590906-43591025)
chr7 (262-377)||(48771937-48772052)
chr7 (258-376)||(2446308-2446426)
chr7 (258-376)||(25590611-25590729)
chr7 (301-378)||(18363694-18363771)
chr7 (301-377)||(22760862-22760938)
chr7 (262-378)||(41519072-41519188)
chr7 (258-337)||(9183149-9183228)
chr7 (258-373)||(15905632-15905746)
chr7 (301-376)||(23552118-23552193)
chr7 (258-377)||(30442487-30442604)
chr7 (265-372)||(42711962-42712069)
chr7 (307-378)||(42836008-42836079)
chr7 (258-376)||(17040970-17041088)
chr7 (262-375)||(35513467-35513580)
chr7 (301-378)||(39631842-39631919)
chr7 (273-377)||(7801179-7801283)
chr7 (328-375)||(22927477-22927524)
chr7 (301-376)||(23301603-23301678)
chr7 (301-376)||(43215184-43215259)
chr7 (258-373)||(43663053-43663168)
chr7 (258-336)||(7309396-7309473)
chr7 (258-335)||(2882991-2883067)
chr7 (258-323)||(21558181-21558246)
chr7 (258-338)||(27313692-27313772)
chr7 (301-369)||(37085550-37085618)
chr7 (310-377)||(25021345-25021412)
chr7 (301-376)||(25655229-25655304)
chr7 (301-376)||(35119383-35119458)
chr7 (258-317)||(37473673-37473732)
chr7 (259-317)||(4572256-4572314)
chr7 (308-374)||(21854550-21854616)
chr7 (258-374)||(29385701-29385817)
chr7 (262-374)||(44628146-44628257)
chr7 (349-377)||(45559199-45559227)
[»] scaffold0258 (1 HSPs)
scaffold0258 (258-376)||(15281-15399)
[»] chr5 (31 HSPs)
chr5 (258-376)||(16773807-16773925)
chr5 (258-377)||(29075780-29075899)
chr5 (258-377)||(6844728-6844847)
chr5 (258-376)||(22737082-22737200)
chr5 (261-378)||(17028225-17028342)
chr5 (284-377)||(25627056-25627149)
chr5 (258-382)||(3252247-3252371)
chr5 (261-377)||(14495766-14495882)
chr5 (258-377)||(8278233-8278352)
chr5 (258-376)||(22020820-22020938)
chr5 (262-335)||(29173531-29173604)
chr5 (258-376)||(21589288-21589406)
chr5 (301-376)||(87424-87499)
chr5 (258-369)||(1410619-1410728)
chr5 (273-372)||(43241655-43241754)
chr5 (258-337)||(43442235-43442314)
chr5 (258-323)||(24907542-24907607)
chr5 (301-373)||(18437088-18437160)
chr5 (305-377)||(19043457-19043529)
chr5 (301-376)||(14285161-14285236)
chr5 (301-372)||(16436622-16436692)
chr5 (259-376)||(18169793-18169905)
chr5 (301-376)||(21549138-21549213)
chr5 (301-376)||(26078052-26078127)
chr5 (305-376)||(30883203-30883274)
chr5 (301-376)||(34984806-34984881)
chr5 (259-317)||(35705045-35705103)
chr5 (349-378)||(7918518-7918547)
chr5 (301-376)||(5390853-5390926)
chr5 (258-314)||(10054109-10054165)
chr5 (301-373)||(14804671-14804743)
[»] chr8 (30 HSPs)
chr8 (262-376)||(968362-968476)
chr8 (268-377)||(23361617-23361726)
chr8 (258-376)||(16852340-16852458)
chr8 (258-376)||(44780072-44780190)
chr8 (258-379)||(3624577-3624697)
chr8 (258-377)||(11819775-11819894)
chr8 (258-374)||(2203494-2203610)
chr8 (301-376)||(19703488-19703563)
chr8 (262-376)||(20994419-20994534)
chr8 (258-376)||(8059632-8059750)
chr8 (258-376)||(8484999-8485117)
chr8 (258-376)||(18540298-18540416)
chr8 (258-376)||(28783060-28783178)
chr8 (258-376)||(29431011-29431129)
chr8 (258-375)||(29858007-29858124)
chr8 (258-376)||(4830487-4830605)
chr8 (301-378)||(27750728-27750805)
chr8 (284-376)||(6569755-6569847)
chr8 (273-365)||(35690037-35690129)
chr8 (301-376)||(3826778-3826853)
chr8 (258-377)||(11518835-11518954)
chr8 (305-376)||(30483889-30483960)
chr8 (301-376)||(35641902-35641977)
chr8 (261-335)||(6536561-6536635)
chr8 (258-292)||(7347921-7347955)
chr8 (304-378)||(23874386-23874460)
chr8 (283-369)||(42740501-42740587)
chr8 (259-376)||(3058009-3058125)
chr8 (258-343)||(3305146-3305231)
chr8 (258-338)||(16843753-16843832)
[»] chr6 (15 HSPs)
chr6 (262-376)||(33549104-33549218)
chr6 (258-375)||(6758380-6758497)
chr6 (261-377)||(12633008-12633124)
chr6 (262-376)||(12234469-12234583)
chr6 (258-376)||(21418470-21418588)
chr6 (258-376)||(31622949-31623067)
chr6 (258-377)||(1056643-1056762)
chr6 (301-376)||(12188304-12188379)
chr6 (257-376)||(14557962-14558080)
chr6 (258-377)||(30127399-30127518)
chr6 (301-377)||(11423565-11423641)
chr6 (262-377)||(3715451-3715566)
chr6 (258-365)||(28363948-28364055)
chr6 (260-374)||(32613100-32613214)
chr6 (273-317)||(12216803-12216847)
[»] chr4 (37 HSPs)
chr4 (258-376)||(7949412-7949530)
chr4 (258-378)||(28635694-28635814)
chr4 (258-369)||(49576852-49576963)
chr4 (262-376)||(21660106-21660220)
chr4 (262-376)||(21668870-21668984)
chr4 (301-377)||(37109352-37109428)
chr4 (301-376)||(19680789-19680864)
chr4 (258-376)||(8030162-8030280)
chr4 (258-356)||(51954134-51954232)
chr4 (301-377)||(19238578-19238654)
chr4 (262-378)||(31826607-31826723)
chr4 (258-377)||(37274417-37274537)
chr4 (258-378)||(46545709-46545829)
chr4 (257-376)||(37720171-37720290)
chr4 (262-376)||(18404845-18404959)
chr4 (262-376)||(51250484-51250598)
chr4 (301-378)||(47044715-47044792)
chr4 (265-377)||(9936926-9937038)
chr4 (301-377)||(31759659-31759735)
chr4 (258-377)||(45060977-45061096)
chr4 (265-376)||(55427165-55427276)
chr4 (301-376)||(2622396-2622475)
chr4 (265-359)||(13015444-13015538)
chr4 (262-377)||(37443701-37443813)
chr4 (328-376)||(27965538-27965586)
chr4 (301-361)||(38869783-38869843)
chr4 (301-376)||(4249177-4249252)
chr4 (303-378)||(9241028-9241103)
chr4 (301-376)||(39509070-39509145)
chr4 (258-372)||(13901746-13901860)
chr4 (297-343)||(24124052-24124098)
chr4 (258-372)||(24234649-24234762)
chr4 (259-317)||(47386750-47386808)
chr4 (261-314)||(30584783-30584836)
chr4 (258-359)||(30938177-30938278)
chr4 (301-373)||(7292799-7292871)
chr4 (297-353)||(42644907-42644963)
[»] scaffold0118 (1 HSPs)
scaffold0118 (258-377)||(41591-41710)
[»] chr2 (43 HSPs)
chr2 (258-376)||(29503271-29503388)
chr2 (262-376)||(42327357-42327471)
chr2 (258-376)||(1435064-1435181)
chr2 (258-376)||(42602554-42602672)
chr2 (258-376)||(11251087-11251205)
chr2 (258-376)||(37480075-37480193)
chr2 (301-378)||(4438980-4439057)
chr2 (301-376)||(14500277-14500352)
chr2 (262-377)||(28846690-28846805)
chr2 (301-376)||(34041589-34041664)
chr2 (301-376)||(39714992-39715067)
chr2 (262-372)||(3001383-3001493)
chr2 (258-343)||(25637184-25637269)
chr2 (258-323)||(38854420-38854485)
chr2 (312-376)||(1729816-1729880)
chr2 (301-377)||(23052524-23052600)
chr2 (258-334)||(33582015-33582091)
chr2 (301-377)||(40416391-40416467)
chr2 (258-376)||(7798994-7799111)
chr2 (301-375)||(16918579-16918653)
chr2 (262-376)||(21195638-21195752)
chr2 (266-376)||(26545840-26545950)
chr2 (258-376)||(29197334-29197452)
chr2 (301-378)||(11062358-11062435)
chr2 (263-376)||(19244109-19244222)
chr2 (258-323)||(38856120-38856185)
chr2 (301-385)||(5147680-5147764)
chr2 (259-315)||(31573600-31573656)
chr2 (258-334)||(35203341-35203417)
chr2 (301-376)||(42922414-42922490)
chr2 (297-376)||(11738041-11738120)
chr2 (273-376)||(35916086-35916189)
chr2 (284-378)||(13803493-13803587)
chr2 (258-368)||(21213777-21213887)
chr2 (258-323)||(2311777-2311842)
chr2 (277-369)||(9776313-9776403)
chr2 (301-378)||(12994377-12994454)
chr2 (301-378)||(32687479-32687556)
chr2 (258-375)||(37755929-37756046)
chr2 (258-315)||(37971956-37972013)
chr2 (258-335)||(41908596-41908673)
chr2 (350-378)||(16381704-16381732)
chr2 (301-376)||(33569859-33569935)
[»] scaffold0211 (1 HSPs)
scaffold0211 (261-376)||(24053-24168)
[»] scaffold0032 (1 HSPs)
scaffold0032 (262-376)||(112282-112396)
[»] scaffold0194 (1 HSPs)
scaffold0194 (275-372)||(13021-13118)
[»] scaffold0122 (1 HSPs)
scaffold0122 (258-369)||(6880-6988)
[»] scaffold0002 (1 HSPs)
scaffold0002 (297-373)||(94968-95044)
[»] scaffold0070 (1 HSPs)
scaffold0070 (258-376)||(42479-42596)
[»] scaffold0299 (1 HSPs)
scaffold0299 (301-370)||(11534-11603)
[»] scaffold0115 (1 HSPs)
scaffold0115 (258-323)||(42622-42687)
[»] scaffold0471 (1 HSPs)
scaffold0471 (297-343)||(8639-8685)
[»] scaffold0126 (1 HSPs)
scaffold0126 (258-359)||(25305-25406)


Alignment Details
Target: chr1 (Bit Score: 427; Significance: 0; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 427; E-Value: 0
Query Start/End: Original strand, 1 - 515
Target Start/End: Original strand, 7743025 - 7743539
Alignment:
Q  1 gaaactacagatgtagaacaacaatcacttttgccatctgttagagacccaaagctctggatggtcaaatgtgtgattggccgtgagcgtgaatccgctg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7743025 gaaactacagatgtagaacaacaatcacttttgccatctgttagagacccaaagctctggatggtcaaatgtgtgattggccgtgagcgtgaatccgctg 7743124  T
Q  101 tttgcctcatgcaaaagtacataaacaaggggtcagacttgcaaatcagatcagctattgctcttgatcatctcaaaaactatatatatgtcgaagcaga 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7743125 tttgcctcatgcaaaagtacataaacaaggggtcagacttgcaaatcagatcagctattgctcttgatcatctcaaaaactatatatatgtcgaagcaga 7743224  T
Q  201 taaagaagctcatgttagagaggtattgtattgtgtcaaatatctactg-nnnnnnngtttgaagaagctaagttagcccacctaaattgacatcctaga 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||  ||||    
T  7743225 taaagaagctcatgttagagaggtattgtattgtgtcaaatatctactgttttttttgtttgaagaagctaagttagcccacctaaattgacattttaga 7743324  T
Q  300 taatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttatgaaatatctattgttgtttat 399  Q
    ||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7743325 taatcgaacttgagacctagaggaggaccacactcccaaattcctagttaataccactaggccaacccaagtgggttatgaaatatctattgttgtttat 7743424  T
Q  400 cacacatacatcatatgatagaattgtcaacnnnnnnnnacatgtgtttcaggcttgcaaaggtcttcgcaatatatttggacgacaaataactcttgtt 499  Q
    |||||||||||||||||||| ||||||||||        ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7743425 cacacatacatcatatgataaaattgtcaacttttttttacatgtgtttcaggcttgcaaaggtcttcgcaatata-ttggacgacaaataactcttgtt 7743523  T
Q  500 ccaatgagagaaatga 515  Q
    ||||| ||||||||||    
T  7743524 ccaataagagaaatga 7743539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 31794222 - 31794340
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||||| ||||||||| |  ||  ||||||||   |||||| ||||| || ||||||||||| |||| ||  |||||||||    
T  31794222 tttgaagaagctaaattagcccacccaaattgacaccagagggaatcgaactctagaccttgaggaggagcacactcccaagtcccaagccaataccact 31794321  T
Q  358 aggccaacccaagtgggtt 376  Q
    |||||||||||||||||||    
T  31794322 aggccaacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 16893512 - 16893393
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||||  ||||||||| |  ||| ||||||||||||||||| ||||| ||  ||||||||||||| | ||  |||||||      
T  16893512 tttgaagaagctaaattagcccactcaaattgacaccggagaaaatcgaacctgagacctcgaggaggagtacactcccaaatctcaagccaataccaac 16893413  T
Q  358 aggccaacccaagtgggtta 377  Q
    ||| ||||||||||||||||    
T  16893412 aggtcaacccaagtgggtta 16893393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 6122912 - 6122794
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||||| |||||||||    ||  ||||||||||||||||| ||||| || ||||||||||| |||| ||   ||||||||    
T  6122912 tttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccact 6122813  T
Q  358 aggccaacccaagtgggtt 376  Q
    ||| |||||||| ||||||    
T  6122812 agggcaacccaaatgggtt 6122794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 278 - 376
Target Start/End: Complemental strand, 12259358 - 12259260
Alignment:
Q  278 ccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    ||||| |||||||||||   || |||||||| |||||| | ||||| || |||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  12259358 ccacccaaattgacatcggtgagaatcgaacttgagacttcgaggaggagcacactcccaaatcccaagttaatatcactatgccaacccaagtgggtt 12259260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 21547438 - 21547556
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||| |||  |||||||||||||||| ||||  ||| |||||||||||| |||| ||||| || ||| ||||||  |||| ||  |||||||||    
T  21547438 tttgaagaagttaaactagcccacctaaattggcatcagagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaataccact 21547537  T
Q  358 aggccaacccaagtgggtt 376  Q
    |||||||||||||| ||||    
T  21547538 aggccaacccaagtcggtt 21547556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 265 - 376
Target Start/End: Complemental strand, 51814605 - 51814494
Alignment:
Q  265 aagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaa 364  Q
    ||||||| |||||||||| |||||| || |  ||| ||||||||||||||||| ||||| || ||||||| || ||| | ||| |||||||  |||||||    
T  51814605 aagctaaattagcccacccaaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaa 51814506  T
Q  365 cccaagtgggtt 376  Q
    ||||||||||||    
T  51814505 cccaagtgggtt 51814494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 25297890 - 25297772
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| ||| |||||||||||||||  |   || |||| ||||| |||||| ||||| || ||||||| || ||||  ||| |||||||||    
T  25297890 tttgaagaagctaaattatcccacctaaattgacgccggtgagaatcaaacctcagacctcgaggaggagcacactctcagatcctaagtcaataccact 25297791  T
Q  358 aggccaacccaagtgggtt 376  Q
    || ||||||||||||||||    
T  25297790 agaccaacccaagtgggtt 25297772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 374
Target Start/End: Original strand, 33700774 - 33700847
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtggg 374  Q
    ||||||||||||||||| ||||| || |||||||||| || || ||  ||||||||||||||||||||||||||    
T  33700774 aatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 376
Target Start/End: Complemental strand, 8904489 - 8904414
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||||||| |||||||| ||||| || ||||||| || ||||| ||| ||||| ||||||||||||||||||||||    
T  8904489 aatcgaacttgagaccttgaggaggagcacactcacatatcccaagtcaatactactaggccaacccaagtgggtt 8904414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 380
Target Start/End: Original strand, 9165200 - 9165275
Alignment:
Q  305 gaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttatga 380  Q
    ||||||||||| | ||||| || ||||||||||  |||| ||  ||||||||||||||||||||||||||||||||    
T  9165200 gaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttatga 9165275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 377
Target Start/End: Complemental strand, 44961879 - 44961764
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    |||||||||| |||||||||| |||||||||    ||| ||||||||||||||||  ||||| || |||||||  ||||| | || |||||||||  | |    
T  44961879 aagaagctaaattagcccacccaaattgacactagagagaatcgaacctgagaccctgaggaggagcacactcttaaatctcaagctaataccacctgac 44961780  T
Q  362 caacccaagtgggtta 377  Q
    ||||||||||||||||    
T  44961779 caacccaagtgggtta 44961764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 365
Target Start/End: Original strand, 52336732 - 52336839
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||  ||| |||||||| | ||||||||| |  |||||||||||||||||| ||  |||| || |||||||||| ||||| ||  |||||||||    
T  52336732 tttgaagaaattaaattagcccatccaaattgacaccagagataatcgaacctgagatcttaaggaggagcacactcccagatcccaagccaataccact 52336831  T
Q  358 aggccaac 365  Q
    ||||||||    
T  52336832 aggccaac 52336839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 4566665 - 4566548
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||||||||||||  || ||| | ||||||||||||  ||| ||||||||||||||||  ||||| || ||||||||||  | || ||  |||| ||||    
T  4566665 tttgaagaagctaaactaaccc-cttaaattgacatcagagagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaatatcact 4566567  T
Q  358 aggccaacccaagtgggtt 376  Q
    |||||||||||||||||||    
T  4566566 aggccaacccaagtgggtt 4566548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 6650713 - 6650595
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||||||||||||  ||  ||||||||||||||| |  ||| ||||||||||||||| | ||||| || || ||||||  ||||| ||  |||||||||    
T  6650713 tttgaagaagctaaactaatccacctaaattgacaccagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagccaataccact 6650614  T
Q  358 aggccaacccaagtgggtt 376  Q
    ||||||||| || ||||||    
T  6650613 aggccaacctaattgggtt 6650595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 352
Target Start/End: Complemental strand, 12587387 - 12587294
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaata 352  Q
    |||||||||||||| ||||||||||||||||| || |  ||| ||||||||||||||||| ||||| || ||||||| || ||||| ||| ||||    
T  12587387 tttgaagaagctaaattagcccacctaaattg-caccggagagaatcgaacctgagacctcgaggaggagcacactcacagatcccaagtcaata 12587294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 17745216 - 17745333
Alignment:
Q  259 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccacta 358  Q
    ||||||||||||| ||| || ||||||||||||| |  ||| |||||||| |||||||| ||||| || ||||| | ||  |||| ||  ||||||||||    
T  17745216 ttgaagaagctaaattaacc-acctaaattgacaccagagagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagccaataccacta 17745314  T
Q  359 ggccaacccaagtgggtta 377  Q
    |||||||||||||| ||||    
T  17745315 ggccaacccaagtgcgtta 17745333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 40257517 - 40257399
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||||||||||||  ||||||||| ||||||||| |  | | ||| |||| |||||||| ||||| || ||||||||||  || | ||  ||||||||     
T  40257517 tttgaagaagctaaactagcccacccaaattgacaccggatagaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccacc 40257418  T
Q  358 aggccaacccaagtgggtt 376  Q
    |||||||||||||||||||    
T  40257417 aggccaacccaagtgggtt 40257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 373
Target Start/End: Original strand, 15786304 - 15786393
Alignment:
Q  284 aaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgg 373  Q
    ||||||||| |  ||| ||||||||||||||||| ||||| || |||||||||| ||||| ||  ||||| ||||| |||||||||||||    
T  15786304 aaattgacaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 378
Target Start/End: Complemental strand, 10526941 - 10526821
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| ||| |||||| ||||||||  |  ||| ||||||| ||||||||| ||||| || || |||||||  |||| ||  |||||||||    
T  10526941 tttgaagaagctaaattaacccacccaaattgactccagagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaataccact 10526842  T
Q  358 aggccaacccaagtgggttat 378  Q
     | ||||||||| ||||||||    
T  10526841 ggaccaacccaaatgggttat 10526821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 376
Target Start/End: Complemental strand, 36371562 - 36371470
Alignment:
Q  284 aaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||||| ||||  ||| |||||||||| |||||| ||||| || ||||||||||  | || ||  ||||||||||||||||||||||||||||    
T  36371562 aaattggcatcagagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 36371470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 377
Target Start/End: Complemental strand, 50901695 - 50901580
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaat-accactagg 360  Q
    |||||||||| ||||||||||||||||| || |  ||| |||||||  |||||||| ||||| || |||||| |||  |||| ||  ||| |||||||||    
T  50901695 aagaagctaaattagcccacctaaattggca-ctgagagaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaattaccactagg 50901597  T
Q  361 ccaacccaagtgggtta 377  Q
    |||||||||||||||||    
T  50901596 ccaacccaagtgggtta 50901580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 8177183 - 8177258
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||||||||||| |||| ||||| || |||||||||| ||||| ||  ||||||||||||||||| ||| ||||||    
T  8177183 aatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactaggccaactcaaatgggtt 8177258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 16169979 - 16170054
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||||||||||| |||| ||||| || ||||||||||  |||| ||| |||||||| |||| ||||||||||||||    
T  16169979 aatcgaacctgaaaccttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 19528328 - 19528403
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    ||||||||||||||||| ||||| || |||||||  | ||||| ||  |||||||| |||||||||||||||||||    
T  19528328 aatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 262 - 377
Target Start/End: Original strand, 52116743 - 52116858
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    |||||||||| ||||||||||| ||||| ||     || ||| ||||||||||| | ||||| || ||||||||||| |||| ||  |||||||| ||||    
T  52116743 aagaagctaaattagcccaccttaattggcactagggagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggc 52116842  T
Q  362 caacccaagtgggtta 377  Q
    |||||||| |||||||    
T  52116843 caacccaactgggtta 52116858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 952629 - 952511
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||| |||||||| ||| ||||||||||||||||||   || |||| |||||||||| | ||||| || ||||||||||  |||| ||  || |||||     
T  952629 tttgacgaagctaaattaacccacctaaattgacatcggggagaatctaacctgagactttgaggatgagcacactcccaggtcccaagccaacaccacc 952530  T
Q  358 aggccaacccaagtgggtt 376  Q
    || ||||| ||||||||||    
T  952529 agaccaactcaagtgggtt 952511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 375
Target Start/End: Complemental strand, 44126510 - 44126396
Alignment:
Q  261 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 360  Q
    ||||||||||| |||||| |||||||||| ||    ||| |||| || ||||||||| | ||| || ||||||||||  ||||  || |||||||| |||    
T  44126510 gaagaagctaaattagcctacctaaattggcactagagagaatcaaatctgagacctcgtggaggagcacactcccaggtcccaggtcaataccaccagg 44126411  T
Q  361 ccaacccaagtgggt 375  Q
    |||||||||||||||    
T  44126410 ccaacccaagtgggt 44126396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 334
Target Start/End: Original strand, 7219876 - 7219952
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactc 334  Q
    |||||||||||||| |||| ||||||||||||  |||  ||| ||||||||||||||| | ||||| || |||||||    
T  7219876 tttgaagaagctaaattagtccacctaaattggtatcaaagagaatcgaacctgagacttcgaggaggagcacactc 7219952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 343
Target Start/End: Complemental strand, 9879555 - 9879471
Alignment:
Q  259 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccc 343  Q
    ||||||||| ||| |||||||||| ||||||||||   ||||||||||| |||||||||  |||||||  |||||| || |||||    
T  9879555 ttgaagaagttaaattagcccacccaaattgacataagagataatcgaatctgagacctcaaggaagagtacactctcagatccc 9879471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 373
Target Start/End: Complemental strand, 9964517 - 9964441
Alignment:
Q  297 agataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgg 373  Q
    |||||||| |||||||||| | |||||||| |||||||||| ||||| ||| |||| ||  |||| |||||||||||    
T  9964517 agataatcaaacctgagacattgaggaagagcacactcccagatcccaagtcaataacatcaggctaacccaagtgg 9964441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 369
Target Start/End: Complemental strand, 17410306 - 17410238
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaa 369  Q
    |||||||| ||||| || ||||| ||||||||||||| ||||| |   |||||||||||||||||||||    
T  17410306 aatcgaacttgagatctcgaggaggaccacactcccagatcccaaaccaataccactaggccaacccaa 17410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 341
Target Start/End: Original strand, 1600250 - 1600333
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatc 341  Q
    ||||||||||||||||||| ||| | ||||||||| |  ||| |||||||||||| || |  |||| || ||||||||||||||    
T  1600250 tttgaagaagctaagttagtccatccaaattgacaccagagagaatcgaacctgaaactttaaggaggagcacactcccaaatc 1600333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 376
Target Start/End: Complemental strand, 2799937 - 2799862
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    ||||||||||||||||| ||||| || |||||||||| ||| | ||   ||||||||||||||| | |||||||||    
T  2799937 aatcgaacctgagaccttgaggaggagcacactcccagatctcaagcctataccactaggccaagcgaagtgggtt 2799862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 337
Target Start/End: Original strand, 31383756 - 31383835
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactccca 337  Q
    |||||||||| |||||||||||||| |||||| || |  ||| ||||||||||||||||   |||| || ||||||||||    
T  31383756 tttgaagaaggtaagttagcccacccaaattggcacctaagagaatcgaacctgagaccccaaggaggagcacactccca 31383835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 369
Target Start/End: Original strand, 42983336 - 42983443
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    |||||||||| |||| |||| ||||||| || |  ||| ||||||||||  |||||  |||| ||||||||||||| ||| | ||| |||||||| | ||    
T  42983336 aagaagctaaattagtccacttaaattggcacctgagagaatcgaacctcggacctcaaggaggaccacactcccagatctcaagtcaataccaccatgc 42983435  T
Q  362 caacccaa 369  Q
    ||||||||    
T  42983436 caacccaa 42983443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 48619167 - 48619286
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||| ||| |||| ||||  ||||||||| |  ||||||| |||||||||| || |||||| | ||||||||||| || | ||| ||||||||     
T  48619167 tttgaagaagttaaattagtccactcaaattgacaccggagataatagaacctgagatcttgaggaaaaacacactcccaagtctcaagtcaataccacc 48619266  T
Q  358 aggccaacccaagtgggtta 377  Q
    |   ||||| ||||||||||    
T  48619267 atatcaacctaagtgggtta 48619286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 21267951 - 21268069
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| ||||||||   ||||||  | |  ||| |||| ||||  |||||||||||| || ||||||||||| |||| ||  ||||| |||    
T  21267951 tttgaagaagctaaattagcccaaaaaaattggaaccagagagaatcaaacccaagacctagaggaggagcacactcccaagtcccaagccaatactact 21268050  T
Q  358 aggccaacccaagtgggtt 376  Q
    || ||||| ||||||||||    
T  21268051 agcccaactcaagtgggtt 21268069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 2220090 - 2220025
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 323  Q
    ||||||||| |||| ||||||||  |||||||||||   ||| ||||||||||||||||| |||||    
T  2220090 tttgaagaaactaaattagcccatttaaattgacattggagagaatcgaacctgagacctcgagga 2220025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 378
Target Start/End: Complemental strand, 1094643 - 1094523
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||| ||| ||||||||||||||||| || |  ||| |||||||  |||||||| | ||| || ||||||| ||  | || ||| |||||||      
T  1094643 tttgaagaagttaaattagcccacctaaattggcaccggagagaatcgaatttgagacctcgtggaggagcacactcacaggttccaagtcaataccaac 1094544  T
Q  358 aggccaacccaagtgggttat 378  Q
    |  ||||||||||||||||||    
T  1094543 aaaccaacccaagtgggttat 1094523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 8254854 - 8254898
Alignment:
Q  273 ttagcccacctaaattgacatcctagataatcgaacctgagacct 317  Q
    |||||||||| ||||||||| |  |||||||||||||||||||||    
T  8254854 ttagcccaccgaaattgacaccagagataatcgaacctgagacct 8254898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 378
Target Start/End: Original strand, 14787294 - 14787414
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||||||||||||  || ||||| |||||||| ||   ||| |||||||||||| |||| |||||  | ||||||| ||  || | ||| |||||||||    
T  14787294 tttgaagaagctaaactaacccacttaaattgatattagagagaatcgaacctgacaccttgaggagaaacacactctcaggtctcaagtcaataccact 14787393  T
Q  358 aggccaacccaagtgggttat 378  Q
    ||| |||| |||||| |||||    
T  14787394 aggtcaactcaagtgagttat 14787414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 15065079 - 15065007
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactc 334  Q
    |||||||||| |||||||||| ||||||||| |   || ||| ||||||||||||| ||||| || |||||||    
T  15065079 aagaagctaaattagcccacccaaattgacaccggggaaaattgaacctgagaccttgaggatgagcacactc 15065007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 28180877 - 28180845
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattga 290  Q
    ||||||||| |||||||||||||||||||||||    
T  28180877 tttgaagaaactaagttagcccacctaaattga 28180845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 377
Target Start/End: Complemental strand, 51703854 - 51703778
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 377  Q
    |||||||||||| || | ||||| || |||||||||| || || ||  ||||||||||| ||||||||| |||||||    
T  51703854 aatcgaacctgaaactttgaggaggagcacactcccagattccaagccaataccactagaccaacccaaatgggtta 51703778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 2e-65; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 75 - 229
Target Start/End: Original strand, 40864778 - 40864932
Alignment:
Q  75 gattggccgtgagcgtgaatccgctgtttgcctcatgcaaaagtacataaacaaggggtcagacttgcaaatcagatcagctattgctcttgatcatctc 174  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40864778 gattggccgtgagcgtgaaacagctgtttgcctcatgcaaaagtacatagataaggggtcagaattgcaaatcagatcagctattgctcttgatcatctc 40864877  T
Q  175 aaaaactatatatatgtcgaagcagataaagaagctcatgttagagaggtattgt 229  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  40864878 aaaaactacatatatgtggaagcagataaagaagctcatgttagagaggtattgt 40864932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 258 - 382
Target Start/End: Original strand, 10499067 - 10499191
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||||| |||||||||||  ||| |||||||||||||||||  ||||||| || ||||||| ||||| ||  ||||||||     
T  10499067 tttgaagaagctaaattagcccacccaaattgacatcggagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccacc 10499166  T
Q  358 aggccaacccaagtgggttatgaaa 382  Q
    ||||||||||||||||||| |||||    
T  10499167 aggccaacccaagtgggttttgaaa 10499191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 369
Target Start/End: Complemental strand, 2667980 - 2667869
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||||||||||||  |||||||||||||||||||    ||||||||||||||||||||| |||||||| |||||||||| ||||| ||  ||||||||     
T  2667980 tttgaagaagctaaactagcccacctaaattgacactagagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaataccacc 2667881  T
Q  358 aggccaacccaa 369  Q
    ||||||||||||    
T  2667880 aggccaacccaa 2667869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 440 - 515
Target Start/End: Original strand, 40864990 - 40865065
Alignment:
Q  440 catgtgtttcaggcttgcaaaggtcttcgcaatatatttggacgacaaataactcttgttccaatgagagaaatga 515  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||| || |||||||| ||||||||||    
T  40864990 catgtgtttcaggcttgcaaaggtcttcgcaatatatttggacaaaaaataacactcgttccaataagagaaatga 40865065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 40864565 - 40864635
Alignment:
Q  1 gaaactacagatgtagaacaacaatcacttttgccatctgttagagacccaaagctctggatggtcaaatg 71  Q
    |||||||||||||||||||| ||| |||||||||||||||| |||||||||||||| ||||||||||||||    
T  40864565 gaaactacagatgtagaacagcaagcacttttgccatctgtgagagacccaaagctgtggatggtcaaatg 40864635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 377
Target Start/End: Complemental strand, 14186748 - 14186647
Alignment:
Q  275 agcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtggg 374  Q
    |||||||||||||||||| |  ||| ||||||||||||||||| ||||| || |||||| |||  |||| ||  ||||||||||||||||||||||||||    
T  14186748 agcccacctaaattgacaccggagagaatcgaacctgagaccttgaggaggagcacact-ccaggtcccaagacaataccactaggccaacccaagtggg 14186650  T
Q  375 tta 377  Q
    |||    
T  14186649 tta 14186647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 338
Target Start/End: Original strand, 49397499 - 49397579
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaa 338  Q
    |||||||||||||| |||| |||||||||||||||||  |||||||||||| |||||||| |||||  | |||||||||||    
T  49397499 tttgaagaagctaaattagtccacctaaattgacatctaagataatcgaacatgagacctcgaggagaagcacactcccaa 49397579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 14339728 - 14339609
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| ||||||||||| ||||| ||     || ||||||||||||||| | ||||| || |||||||||||||||| ||  ||||||||     
T  14339728 tttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaataccacc 14339629  T
Q  358 aggccaacccaagtgggtta 377  Q
    ||||||| |||| |||||||    
T  14339628 aggccaatccaactgggtta 14339609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 51903836 - 51903955
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||||  ||||||||| |  ||| ||||||||||||||||  ||||| || |||||||||| ||||| ||  |||||||      
T  51903836 tttgaagaagctaaattagcccactcaaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaataccaac 51903935  T
Q  358 aggccaacccaagtgggtta 377  Q
    ||| ||||||| ||||||||    
T  51903936 aggtcaacccaggtgggtta 51903955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 11642167 - 11642285
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||||||||||||  || ||| | ||||||||||    ||||||||||||||||||||| ||||| || |||| || || ||||| |||| |||||| |    
T  11642167 tttgaagaagctaaactaaccctcttaaattgacactaaagataatcgaacctgagaccttgaggaggatcacaatctcagatcccaagtttataccagt 11642266  T
Q  358 aggccaacccaagtgggtt 376  Q
    ||||||| |||||||||||    
T  11642267 aggccaatccaagtgggtt 11642285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 376
Target Start/End: Complemental strand, 36720495 - 36720381
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    ||||||||||   ||||||||||||||||||    ||| |||||||||||| |||| ||||| || |||||||||| ||||| ||  |||||||| || |    
T  36720495 aagaagctaaaccagcccacctaaattgacactagagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagac 36720396  T
Q  362 caacccaagtgggtt 376  Q
    |||||||||||||||    
T  36720395 caacccaagtgggtt 36720381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 376
Target Start/End: Complemental strand, 4222238 - 4222141
Alignment:
Q  279 cacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||||||||||||| |  ||| |||||||||| |||| | ||||| || |||||||||| ||||| ||  |||||||||| |||||||||||||||||    
T  4222238 cacctaaattgacaccagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 378
Target Start/End: Original strand, 10445097 - 10445218
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaa-taccac 356  Q
    |||||||||||||| |||||||||  |||||  || |  ||| ||||||||||||||||| ||||| || ||||||||||  |||| ||  || | ||||    
T  10445097 tttgaagaagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaattgccac 10445196  T
Q  357 taggccaacccaagtgggttat 378  Q
    ||||||||||||||||||||||    
T  10445197 taggccaacccaagtgggttat 10445218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 378
Target Start/End: Original strand, 49494147 - 49494224
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 378  Q
    |||| |||||||||||| |||||||| |||||||||||||  | ||| ||||||||||||| |||||||||| |||||    
T  49494147 aatcaaacctgagacctcgaggaagagcacactcccaaatttcaagtcaataccactaggctaacccaagtgagttat 49494224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 52769941 - 52770026
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccc 343  Q
    |||||||||||||| ||||||||||||||||||||    ||| |||||||||||||||||  |||| || |||||||||| |||||    
T  52769941 tttgaagaagctaaattagcccacctaaattgacactaaagagaatcgaacctgagacctcaaggaggagcacactcccagatccc 52770026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 369
Target Start/End: Original strand, 4844472 - 4844580
Alignment:
Q  261 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 360  Q
    ||||||||||| |||||||||  |||||| || |  ||| |||||| |||||||||| ||||| || |||||||||| ||||| ||| |||||||| ||     
T  4844472 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccaga 4844571  T
Q  361 ccaacccaa 369  Q
    |||||||||    
T  4844572 ccaacccaa 4844580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 369
Target Start/End: Original strand, 4870168 - 4870276
Alignment:
Q  261 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 360  Q
    ||||||||||| |||||||||  |||||| || |  ||| |||||| |||||||||| ||||| || |||||||||| ||||| ||| |||||||| ||     
T  4870168 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccaga 4870267  T
Q  361 ccaacccaa 369  Q
    |||||||||    
T  4870268 ccaacccaa 4870276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 376
Target Start/End: Complemental strand, 203169 - 203090
Alignment:
Q  297 agataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||||||||||||| | ||||  ||||| | |||||||||  ||||| ||| ||||||||||||||||||||||||||||    
T  203169 agataatcgaacctcaaaccttaaggaaaagcacactccctgatcccaagtcaataccactaggccaacccaagtgggtt 203090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 376
Target Start/End: Original strand, 2597181 - 2597296
Alignment:
Q  262 aagaagctaagttag-cccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 360  Q
    |||||||||| |||| |||||||||||| ||||  |||| | |||||||||||||||  |||| || |||||||| ||||||  ||  |||||||| ||     
T  2597181 aagaagctaaattagtcccacctaaatttacatagtagagattcgaacctgagacctcaaggaggagcacactcctaaatccgaagccaataccaccaga 2597280  T
Q  361 ccaacccaagtgggtt 376  Q
    ||||||||||||||||    
T  2597281 ccaacccaagtgggtt 2597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 369
Target Start/End: Original strand, 8075085 - 8075196
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||||| |||||||||    ||  |||||||||||| |||| ||||| || ||||||||||| |||| ||   ||||||||    
T  8075085 tttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgaaaccttgaggaggagcacactcccaagtcccaagcctataccact 8075184  T
Q  358 aggccaacccaa 369  Q
    ||| ||||||||    
T  8075185 agggcaacccaa 8075196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 8170790 - 8170671
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||  ||| |||||||||| ||||||||| |  ||  ||||||||||||||||| ||| | || ||||||||||| |  | ||  |||||||||    
T  8170790 tttgaagaatttaaattagcccacccaaattgacaccagaggaaatcgaacctgagaccttgagtaggagcacactcccaagtttcaagccaataccact 8170691  T
Q  358 aggccaacccaagtgggtta 377  Q
    |||||||||||| |||||||    
T  8170690 aggccaacccaaatgggtta 8170671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 377
Target Start/End: Complemental strand, 16991656 - 16991541
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    |||||||||| ||||||||| ||||||| ||||  ||| |||| || |||||||||  | |||||  ||||||||| ||||| ||  |||||||| ||||    
T  16991656 aagaagctaaattagcccacataaattggcatcggagagaatcaaaactgagacctcaaagaagagtacactcccagatcccaagccaataccaccaggc 16991557  T
Q  362 caacccaagtgggtta 377  Q
    |||||||| |||||||    
T  16991556 caacccaaatgggtta 16991541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 27093362 - 27093437
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||| |||||||||||| ||||| || ||||||||||| | || ||  ||||||||||||||||||||||||||||    
T  27093362 aatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 27093437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 376
Target Start/End: Complemental strand, 30311381 - 30311306
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    ||||||||||||||||| ||||| || |||||||||| ||||| ||   ||||||||||||||||||| |||||||    
T  30311381 aatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacccaggtgggtt 30311306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 31520563 - 31520681
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||| ||||||| |||||||||  |||||||||    ||| |||| ||||| |||||| ||||| || |||||||||| ||||| ||  ||| ||||     
T  31520563 tttgaaaaagctaaattagcccactcaaattgacactggagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagccaatgccacc 31520662  T
Q  358 aggccaacccaagtgggtt 376  Q
    |||||||||||||||||||    
T  31520663 aggccaacccaagtgggtt 31520681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 274 - 376
Target Start/End: Original strand, 31788945 - 31789046
Alignment:
Q  274 tagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgg 373  Q
    ||||||||| ||||||||| |  |||||||| ||||| | |||| ||||| || |||||||||| ||||| ||  |||| ||||||||||||||||||||    
T  31788945 tagcccacccaaattgaca-cagagataatcaaacctaaaacctcgaggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgg 31789043  T
Q  374 gtt 376  Q
    |||    
T  31789044 gtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 46518746 - 46518628
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||||||||||||  || ||| |  |||||| ||||  ||| |||| ||||||| |||| ||||| || |||||||||| ||||| ||  |||||||||    
T  46518746 tttgaagaagctaaactaaccccctcaaattggcatcagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccact 46518647  T
Q  358 aggccaacccaagtgggtt 376  Q
    | |||||||||||||||||    
T  46518646 atgccaacccaagtgggtt 46518628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 375
Target Start/End: Original strand, 47454575 - 47454692
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||||||||||||  || ||||||||||||| |||    || ||||||||||||||||| ||||| || |||||||| | ||| | ||  |||||||||    
T  47454575 tttgaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaataccact 47454674  T
Q  358 aggccaacccaagtgggt 375  Q
    ||  ||||||||||||||    
T  47454675 agaacaacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 54990820 - 54990755
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 323  Q
    |||||||||||||| ||||||||||||||||| ||||   || ||||||||||||||||| |||||    
T  54990820 tttgaagaagctaaattagcccacctaaattgccatcgaggagaatcgaacctgagaccttgagga 54990755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 377
Target Start/End: Original strand, 28703405 - 28703481
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 377  Q
    ||||||||||||||||| || || || |||||||||| ||||| || ||||| |||| | |||||||||||||||||    
T  28703405 aatcgaacctgagaccttgaagaggagcacactcccagatcccaagctaatatcactggaccaacccaagtgggtta 28703481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 337
Target Start/End: Complemental strand, 33899725 - 33899653
Alignment:
Q  265 aagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactccca 337  Q
    ||||||| ||||| |||| ||||||||| |  ||| ||||||||||||||||||||||| || ||||||||||    
T  33899725 aagctaaattagcacacccaaattgacaccaaagagaatcgaacctgagacctagaggaggagcacactccca 33899653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 258 - 373
Target Start/End: Original strand, 13808843 - 13808958
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||  ||| | ||||||||||   ||| ||| ||||||||||||||||||| || |||||| ||| ||||| ||| ||||  ||     
T  13808843 tttgaagaagctaaattaatccatccaaattgacattagagagaattgaacctgagacctagaggaggagcacactgccagatcccaagtcaataagacc 13808942  T
Q  358 aggccaacccaagtgg 373  Q
    || |||||||||||||    
T  13808943 agaccaacccaagtgg 13808958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 376
Target Start/End: Original strand, 15048058 - 15048137
Alignment:
Q  297 agataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    ||||||||||||||||||||| ||||| || |||| ||||| ||||| ||   |||||| || |||||||||||||||||    
T  15048058 agataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcctataccattaagccaacccaagtgggtt 15048137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 37788466 - 37788541
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    ||||||||||||||||| ||||| || |||||||| |  | || ||| ||||||||| ||||||||||||||||||    
T  37788466 aatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggccaacccaagtgggtt 37788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 44743815 - 44743898
Alignment:
Q  260 tgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccc 343  Q
    |||||||||||| ||| |||||| |||||| ||    ||||||||||||||||||||| ||||| || |||||||||| |||||    
T  44743815 tgaagaagctaaattaacccacccaaattggcactggagataatcgaacctgagacctcgaggaggagcacactcccagatccc 44743898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 12761630 - 12761511
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||||||||| ||  |||||||||||||||| || |   || |||||||||||||| ||  |||| || ||||||||||  |||| ||| ||||||||     
T  12761630 tttgaagaagcaaaactagcccacctaaattggcaccggggaaaatcgaacctgagagctcaaggaggaacacactcccaggtcccaagtcaataccacc 12761531  T
Q  358 aggccaacccaagtgggtta 377  Q
    || |||||||| | ||||||    
T  12761530 agaccaacccatgcgggtta 12761511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 16354893 - 16354968
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    ||||||||||||||||  ||||| || ||||||| ||  | || ||  ||||||||||||||||||||||||||||    
T  16354893 aatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 368
Target Start/End: Complemental strand, 11612373 - 11612307
Alignment:
Q  302 atcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaaccca 368  Q
    ||||||||||||||||  |||| || ||||||||||  |||| ||| |||||||| |||||||||||    
T  11612373 atcgaacctgagaccttaaggaggagcacactcccagctcccaagtgaataccaccaggccaaccca 11612307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 378
Target Start/End: Original strand, 8796141 - 8796170
Alignment:
Q  349 aataccactaggccaacccaagtgggttat 378  Q
    ||||||||||||||||||||||||||||||    
T  8796141 aataccactaggccaacccaagtgggttat 8796170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 44069876 - 44069799
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcc 335  Q
    ||||||||||||||  |||||||||||||||| || |  | | |||| |||||||||||| ||||| || ||||||||    
T  44069876 tttgaagaagctaaactagcccacctaaattggcaccggaaagaatcaaacctgagaccttgaggaggagcacactcc 44069799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 382
Target Start/End: Complemental strand, 7673387 - 7673263
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||||||| |||| |||| |||  |||||||||||   |||  ||||||||| |||||| ||| |  | |||||| ||||||||| ||| ||||||||     
T  7673387 tttgaagaatctaaattagtccatttaaattgacattagagagtatcgaacctaagaccttgagaataagcacacttccaaatcccaagtcaataccacc 7673288  T
Q  358 aggccaacccaagtgggttatgaaa 382  Q
    || |||||| || |||||| |||||    
T  7673287 agaccaacctaactgggttgtgaaa 7673263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 310
Target Start/End: Complemental strand, 7973674 - 7973622
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacct 310  Q
    |||||||||||||| |||| ||||| |||||||||||  ||| ||||||||||    
T  7973674 tttgaagaagctaaattagtccacccaaattgacatcagagagaatcgaacct 7973622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 377
Target Start/End: Complemental strand, 35111255 - 35111179
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 377  Q
    |||||||| |||||||| ||||| || ||||||||||  || | | | ||| |||||||||||| ||||||||||||    
T  35111255 aatcgaacatgagacctcgaggatgagcacactcccaggtctcaaatcaatgccactaggccaatccaagtgggtta 35111179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 314
Target Start/End: Complemental strand, 36015566 - 36015510
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgaga 314  Q
    ||||||||||| || |||||||||||||||||||| |  ||| ||||| ||||||||    
T  36015566 tttgaagaagcaaaattagcccacctaaattgacaccgaagagaatcgtacctgaga 36015510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 2e-29; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 262 - 376
Target Start/End: Original strand, 45709670 - 45709784
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    ||||||||||||||||||||||||||||  |||  ||||||||||||||||||||| ||||| || ||||||| || ||||| || ||||||||||||||    
T  45709670 aagaagctaagttagcccacctaaattggtatcggagataatcgaacctgagacctcgaggaggagcacactctcagatcccaagctaataccactaggc 45709769  T
Q  362 caacccaagtgggtt 376  Q
    |||||||| ||||||    
T  45709770 caacccaaatgggtt 45709784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 258 - 371
Target Start/End: Original strand, 41519223 - 41519335
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||||||||||||||| |  ||| || |||||||||||||| ||||| || |||||||| ||||||| ||| |||||||||    
T  41519223 tttgaagaagctaaattagcccacctaaattgaca-cagagagaagcgaacctgagaccttgaggaggagcacactcctaaatcccaagtcaataccact 41519321  T
Q  358 aggccaacccaagt 371  Q
    ||||||||||||||    
T  41519322 aggccaacccaagt 41519335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 15137671 - 15137552
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||||||| |||| |||||||||| ||||||||| |  ||| |||| |||||||||||| ||||| || |||||||| ||||||| ||| | ||||||     
T  15137671 tttgaagaaactaaattagcccacccaaattgacaccagagagaatctaacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccacc 15137572  T
Q  358 aggccaacccaagtgggtta 377  Q
    ||||||||||||||||||||    
T  15137571 aggccaacccaagtgggtta 15137552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 376
Target Start/End: Original strand, 20335790 - 20335907
Alignment:
Q  259 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccacta 358  Q
    ||||||||| ||| |||||||| | |||||||||||   || ||||||||||||||||| ||||| || ||||||||||| |||| ||  |||||| |||    
T  20335790 ttgaagaagttaaattagcccatccaaattgacatcggtgagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacctcta 20335889  T
Q  359 ggccaacccaagtgggtt 376  Q
    | ||||||||||||||||    
T  20335890 gaccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 262 - 378
Target Start/End: Complemental strand, 24513911 - 24513795
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    |||||| ||| |||||||||| |||||||||||   || |||||||||||||||||  ||||  |  ||||||||||||| | ||  |||||||||||||    
T  24513911 aagaagttaaattagcccacccaaattgacatcagtgaaaatcgaacctgagacctcaaggagaagtacactcccaaatctcaagccaataccactaggc 24513812  T
Q  362 caacccaagtgggttat 378  Q
    |||||||||||||||||    
T  24513811 caacccaagtgggttat 24513795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 30579453 - 30579335
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| ||||||||||||||||| || |  ||| ||||||||||||||||| ||||| |   |||||||||  || | ||  ||||||||     
T  30579453 tttgaagaagctaaattagcccacctaaattggcaccagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccacc 30579354  T
Q  358 aggccaacccaagtgggtt 376  Q
    |||||||||||||||||||    
T  30579353 aggccaacccaagtgggtt 30579335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 377
Target Start/End: Original strand, 26459411 - 26459487
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 377  Q
    ||||||||||||||||| ||||| || ||||||||||  |||| ||  |||||||||||||||||||||||||||||    
T  26459411 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 26459487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 41487477 - 41487362
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| ||||||||||||||||| || |    | ||||||||||||||||| ||||| ||  |||||||||| |||| ||  ||||||||     
T  41487477 tttgaagaagctaaattagcccacctaaattggcaccgggaagaatcgaacctgagaccttgagga-ga--acactcccaagtcccaagccaataccacc 41487381  T
Q  358 aggccaacccaagtgggtt 376  Q
    |||||||||||||||||||    
T  41487380 aggccaacccaagtgggtt 41487362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 43591025 - 43590906
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| ||||||||||| ||||| ||     || ||||||||||||||| | ||||| || ||||||||||| |||| ||  ||||||||     
T  43591025 tttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccacc 43590926  T
Q  358 aggccaacccaagtgggtta 377  Q
    |||||||||||| |||||||    
T  43590925 aggccaacccaactgggtta 43590906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 262 - 377
Target Start/End: Complemental strand, 48772052 - 48771937
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    |||||||||| |||||||||||||||||  |     ||||||||||||||||||||  |||| || |||||||||| ||||| ||  |||||||| | ||    
T  48772052 aagaagctaaattagcccacctaaattggtacttgggataatcgaacctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagc 48771953  T
Q  362 caacccaagtgggtta 377  Q
    ||||||||||||||||    
T  48771952 caacccaagtgggtta 48771937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 2446426 - 2446308
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| ||||||||||||||| | || |  ||| |||||||| ||||| || ||||| || ||||||||||| |||| ||  |||||||      
T  2446426 tttgaagaagctaaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatc 2446327  T
Q  358 aggccaacccaagtgggtt 376  Q
    || ||||||||||||||||    
T  2446326 agaccaacccaagtgggtt 2446308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 25590729 - 25590611
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||||  ||||||||| |  ||| ||||||||| ||||||| ||||| || |||||||||| ||| | ||  |||||||      
T  25590729 tttgaagaagctaaattagcccactcaaattgacaccgaagaaaatcgaacccgagacctcgaggaggagcacactcccagatctcaagccaataccaac 25590630  T
Q  358 aggccaacccaagtgggtt 376  Q
    ||| |||||||||||||||    
T  25590629 aggtcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 378
Target Start/End: Complemental strand, 18363771 - 18363694
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 378  Q
    |||| |||||||||||| ||||| || |||||||||||||| | ||   |||||||||||||||||||||||||||||    
T  18363771 aatcaaacctgagaccttgaggaggagcacactcccaaatctcaagcctataccactaggccaacccaagtgggttat 18363694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 301 - 377
Target Start/End: Complemental strand, 22760938 - 22760862
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 377  Q
    ||||||||||||||||| ||||| || ||||||||||  |||| ||| |||||||| || |||||||||||||||||    
T  22760938 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtta 22760862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 262 - 378
Target Start/End: Original strand, 41519072 - 41519188
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    |||||||||| |||||||||| ||||||||| |  ||||||||||| ||||||||| ||| | || |||||||  ||||||| ||  | || ||||||||    
T  41519072 aagaagctaaattagcccacccaaattgacaccggagataatcgaatctgagaccttgagaaggagcacactcttaaatcccaagccagtatcactaggc 41519171  T
Q  362 caacccaagtgggttat 378  Q
    ||||| |||||| ||||    
T  41519172 caaccaaagtggattat 41519188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 337
Target Start/End: Original strand, 9183149 - 9183228
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactccca 337  Q
    ||||||||| |||| |||||||||| ||||||||| |  ||||||||||||||||||| | ||||| || ||||||||||    
T  9183149 tttgaagaaactaaattagcccacccaaattgacaccagagataatcgaacctgagactttgaggaggagcacactccca 9183228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 373
Target Start/End: Original strand, 15905632 - 15905746
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| ||| |||||| ||||||||||    || |||||||||||||||||| |||| || ||||||||||  |||| ||  |||||| |     
T  15905632 tttgaagaagctaaattaacccacccaaattgacattagggagaatcgaacctgagaccta-aggaggagcacactcccaggtcccaagccaataccgcc 15905730  T
Q  358 aggccaacccaagtgg 373  Q
    ||||||||||||||||    
T  15905731 aggccaacccaagtgg 15905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 376
Target Start/End: Complemental strand, 23552193 - 23552118
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||||||| |||||||| ||||| || ||||||||||  |||| ||| |||| |||||||||||||||||||||||    
T  23552193 aatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggtt 23552118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 30442604 - 30442487
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||| ||||||| ||| |||||| |||||||| ||| ||| |||||||||| |||||| ||||| || || |||||||  |||| ||  |||||||||    
T  30442604 tttgaataagctaaattaacccacccaaattgac-tcc-agagaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccact 30442507  T
Q  358 aggccaacccaagtgggtta 377  Q
     |||||||||||||||||||    
T  30442506 gggccaacccaagtgggtta 30442487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 372
Target Start/End: Complemental strand, 42712069 - 42711962
Alignment:
Q  265 aagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaa 364  Q
    ||||||| ||||||||||||||||||||     || |||||||| |||||||| ||||| || ||||||||||  | || || ||||||||||| |||||    
T  42712069 aagctaaattagcccacctaaattgacactagggagaatcgaacatgagaccttgaggaggagcacactcccatgtaccaagctaataccactaagccaa 42711970  T
Q  365 cccaagtg 372  Q
    ||||||||    
T  42711969 cccaagtg 42711962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 42836008 - 42836079
Alignment:
Q  307 acctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 378  Q
    ||||||| ||| |||||||| ||||||||||  |||| ||  ||||||||||||||||||||||||||||||    
T  42836008 acctgaggccttgaggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttat 42836079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 17040970 - 17041088
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| ||  |||||| |||||| ||    ||| ||||||||||||||||| ||||| || |||||| ||| ||||| ||  ||| |||||    
T  17040970 tttgaagaagctaaattgacccacccaaattggcacttgagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccact 17041069  T
Q  358 aggccaacccaagtgggtt 376  Q
    || ||||||||||||||||    
T  17041070 agaccaacccaagtgggtt 17041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 375
Target Start/End: Complemental strand, 35513580 - 35513467
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    |||||||||| |||| |||||||||||  ||||  ||| |||||||| |||||  | ||||| || ||||||| ||| |||| ||  |||||||||||||    
T  35513580 aagaagctaaattagtccacctaaattaccatcggagaaaatcgaacatgagatatcgaggaggagcacactctcaagtcccaagcaaataccactaggc 35513481  T
Q  362 caacccaagtgggt 375  Q
    |||||||| |||||    
T  35513480 caacccaaatgggt 35513467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 301 - 378
Target Start/End: Complemental strand, 39631919 - 39631842
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 378  Q
    ||||||||||||||||| ||||| || |  |||||||  |||| ||  ||||||||||||||||||||||||||||||    
T  39631919 aatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggttat 39631842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 377
Target Start/End: Complemental strand, 7801283 - 7801179
Alignment:
Q  273 ttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtg 372  Q
    ||||||||| ||||||||||||  ||    ||||||||||||||| || || || ||||||||||  |||| ||| |||||||| ||||||| |||||||    
T  7801283 ttagcccacttaaattgacatcggaggggttcgaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtg 7801184  T
Q  373 ggtta 377  Q
    |||||    
T  7801183 ggtta 7801179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 375
Target Start/End: Complemental strand, 22927524 - 22927477
Alignment:
Q  328 cacactcccaaatccctagttaataccactaggccaacccaagtgggt 375  Q
    |||||||| | ||||| |||||||||||||||||||||||||||||||    
T  22927524 cacactcctagatcccaagttaataccactaggccaacccaagtgggt 22927477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 23301603 - 23301678
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||| ||| ||||||||  |||| || ||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  23301603 aatcaaacttgagacctcaaggaggagcacactcccaagtcccaagtcaataccaccaggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 301 - 376
Target Start/End: Complemental strand, 43215259 - 43215184
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    ||||||||||||||||| ||||| || |||||||| |  |||| ||  ||||||||||| ||||||||||||||||    
T  43215259 aatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgggtt 43215184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 258 - 373
Target Start/End: Original strand, 43663053 - 43663168
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||| ||||| ||||||| | |  ||| | |||||||||||| || ||||| |||||| |||| |  |||| ||| |||||||      
T  43663053 tttgaagaagctaaattagtccacccaaattgataccggagagattcgaacctgagatctcgaggaggaccacgctcctaggtcccaagtcaataccatc 43663152  T
Q  358 aggccaacccaagtgg 373  Q
    ||||||||||||||||    
T  43663153 aggccaacccaagtgg 43663168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 336
Target Start/End: Complemental strand, 7309473 - 7309396
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactccc 336  Q
    |||||||||||||| ||||||||| |||||||||| |  ||| |||||||| |||||||| ||||| || |||||||||    
T  7309473 tttgaagaagctaaattagcccacttaaattgaca-cggagagaatcgaacttgagacctcgaggaggagcacactccc 7309396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 2883067 - 2882991
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcc 335  Q
    |||||||||||||||| ||||||||||||||| || |  ||| ||| ||||||||||||| ||||| || ||||||||    
T  2883067 tttgaagaagctaagt-agcccacctaaattgccaccagagagaattgaacctgagaccttgaggaggagcacactcc 2882991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 21558246 - 21558181
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 323  Q
    |||||||||||||| ||| ||||||||||||| || |  ||| ||||||||||||||||| |||||    
T  21558246 tttgaagaagctaaattaacccacctaaattggcaccagagagaatcgaacctgagaccttgagga 21558181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 338
Target Start/End: Original strand, 27313692 - 27313772
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaa 338  Q
    |||||||||||||| ||||| ||||||||||| ||||  ||| ||||||| |||| |||| ||||| || || ||||||||    
T  27313692 tttgaagaagctaaattagctcacctaaattggcatcagagagaatcgaatctgaaaccttgaggaggagcaaactcccaa 27313772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 369
Target Start/End: Original strand, 37085550 - 37085618
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaa 369  Q
    |||||||||||| |||| ||||| || |||||||||||||||| ||  |||||||| | ||||||||||    
T  37085550 aatcgaacctgaaacctcgaggatgagcacactcccaaatcccaagccaataccaccatgccaacccaa 37085618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 377
Target Start/End: Original strand, 25021345 - 25021412
Alignment:
Q  310 tgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 377  Q
    |||||| | ||||| || ||||||||||  |||| ||  |||||||||||||||||||||||||||||    
T  25021345 tgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 25021412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 25655229 - 25655304
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||||||||||| |||| ||||| || ||||||| || ||||| ||| ||||||||||  |||||||| |||||||    
T  25655229 aatcgaacctgaaaccttgaggaggatcacactcacagatcccaagtcaataccactaaaccaacccaggtgggtt 25655304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 376
Target Start/End: Complemental strand, 35119458 - 35119383
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||||||||||| | || ||||| || || || |||| ||||| ||| ||||||||||||||||||||| ||||||    
T  35119458 aatcgaacctgaaatcttgaggatgagcatacacccagatcccaagtcaataccactaggccaacccaaatgggtt 35119383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 317
Target Start/End: Complemental strand, 37473732 - 37473673
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacct 317  Q
    |||||||||||||| ||| |||||||||||||||||    || |||||||||||||||||    
T  37473732 tttgaagaagctaaattaacccacctaaattgacattagggagaatcgaacctgagacct 37473673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 4572256 - 4572314
Alignment:
Q  259 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacct 317  Q
    ||||||||| ||| |||||||||| ||||||||| |  ||| |||||||||||||||||    
T  4572256 ttgaagaagataaattagcccacccaaattgacaccggagagaatcgaacctgagacct 4572314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 308 - 374
Target Start/End: Complemental strand, 21854616 - 21854550
Alignment:
Q  308 cctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtggg 374  Q
    |||||||| | ||||| || |||||||||| ||||||||  |||||||  |||||||||||||||||    
T  21854616 cctgagactttgaggaggagcacactcccagatccctagccaataccatcaggccaacccaagtggg 21854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 374
Target Start/End: Original strand, 29385701 - 29385817
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||||||||| ||  ||||||||| |||||| || |  ||| |||| |||||||||||| ||||| || |||||||| || |||| ||  || ||||      
T  29385701 tttgaagaagcaaaagtagcccacccaaattggcaccaaagagaatcaaacctgagaccttgaggaggagcacactccaaagtcccaagccaacaccatc 29385800  T
Q  358 aggccaacccaagtggg 374  Q
     ||||||||||||||||    
T  29385801 cggccaacccaagtggg 29385817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 44628146 - 44628257
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    |||||||||| |||||||||| ||||||||| || ||  |||| ||| |||||| | ||||| || |||||||| |  |||| || ||| | ||| ||||    
T  44628146 aagaagctaaattagcccaccaaaattgaca-ccgagggaatcaaacttgagactttgaggaggagcacactccaaggtcccaagctaacaacaccaggc 44628244  T
Q  362 caacccaagtggg 374  Q
    |||||||||||||    
T  44628245 caacccaagtggg 44628257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 377
Target Start/End: Complemental strand, 45559227 - 45559199
Alignment:
Q  349 aataccactaggccaacccaagtgggtta 377  Q
    |||||||||||||||||||||||||||||    
T  45559227 aataccactaggccaacccaagtgggtta 45559199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 15281 - 15399
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||| ||||| || ||||||||||  |||| ||  ||||||||     
T  15281 tttgaagaagctaaattagcccacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccacc 15380  T
Q  358 aggccaacccaagtgggtt 376  Q
    || ||||||||||||||||    
T  15381 agaccaacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 9e-25; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 16773925 - 16773807
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| ||||||||||||||||| ||||  ||| ||||||||||||||||| ||||| || ||||||||||  |||| ||| ||||||||     
T  16773925 tttgaagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccacc 16773826  T
Q  358 aggccaacccaagtgggtt 376  Q
    || ||||| ||||||||||    
T  16773825 agaccaactcaagtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 29075899 - 29075780
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||| |||||||| || |  ||| |||||||| ||||| || ||||| || |||||||||| ||||| ||  |||||||||    
T  29075899 tttgaagaagctaaattagcccatctaaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccact 29075800  T
Q  358 aggccaacccaagtgggtta 377  Q
    |||| |||||||||||||||    
T  29075799 aggcaaacccaagtgggtta 29075780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 6844847 - 6844728
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||||||||||||  ||  |||||||||||| ||    |||||||||||||| |||||| ||||| || ||||||||||||| || ||| ||||||||     
T  6844847 tttgaagaagctaaactaatccacctaaattggcacgagagataatcgaaccttagacctcgaggaggaacacactcccaaattccaagtcaataccacc 6844748  T
Q  358 aggccaacccaagtgggtta 377  Q
     |||||||||||||||||||    
T  6844747 tggccaacccaagtgggtta 6844728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 22737200 - 22737082
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| ||| |||||||||||||| |||  ||  ||||||||||||||| | | ||| || |||||| |||| |||| ||  |||||||||    
T  22737200 tttgaagaagctaaattaacccacctaaattgatatcagagggaatcgaacctgagacattggggaggagcacacttccaagtcccaagccaataccact 22737101  T
Q  358 aggccaacccaagtgggtt 376  Q
    || ||||||||||||||||    
T  22737100 agaccaacccaagtgggtt 22737082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 378
Target Start/End: Original strand, 17028225 - 17028342
Alignment:
Q  261 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 360  Q
    ||||||||||| ||||||||||||||||||||    ||  |||| |||||||||||| ||||| || ||||||||||| |||| |   ||||| ||||||    
T  17028225 gaagaagctaaattagcccacctaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaacccaatacaactagg 17028324  T
Q  361 ccaacccaagtgggttat 378  Q
     |||||||||||||||||    
T  17028325 tcaacccaagtgggttat 17028342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 284 - 377
Target Start/End: Complemental strand, 25627149 - 25627056
Alignment:
Q  284 aaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 377  Q
    ||||||||| |  ||| ||||||||||||||||| ||||| || ||||||||||| | || ||  |||||||||||||||||||||||||||||    
T  25627149 aaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtta 25627056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 382
Target Start/End: Original strand, 3252247 - 3252371
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||||||| |||| |||||||| |  ||||| ||||  ||| |||||||||||||| |  ||||||||   ||||||||| || | ||| |||||||||    
T  3252247 tttgaagaaactaaattagcccatccgaattggcatcagagagaatcgaacctgagagcctgaggaagagtgcactcccaagtctcaagtcaataccact 3252346  T
Q  358 aggccaacccaagtgggttatgaaa 382  Q
    |||||||||||||||||||| ||||    
T  3252347 aggccaacccaagtgggttaagaaa 3252371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 377
Target Start/End: Original strand, 14495766 - 14495882
Alignment:
Q  261 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 360  Q
    |||||||||||  ||||||| |||||||| ||||  ||| |||| || ||||||||| ||||| || |||||||||| ||||| ||| |||||||| ||     
T  14495766 gaagaagctaaactagcccatctaaattggcatcggagagaatcaaatctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccaga 14495865  T
Q  361 ccaacccaagtgggtta 377  Q
    ||||||||| |||||||    
T  14495866 ccaacccaaatgggtta 14495882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 8278233 - 8278352
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| ||||||||||||||| | || |  |||||||| ||| ||||| || ||||| || ||||||||||| |||| ||  |||||||      
T  8278233 tttgaagaagctaaattagcccacctaaatcggcaccggagataatcaaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatc 8278332  T
Q  358 aggccaacccaagtgggtta 377  Q
    || |||||||||||||||||    
T  8278333 agaccaacccaagtgggtta 8278352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 22020820 - 22020938
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||||||| |||| |||||||||||||||| |||    ||| ||||||| ||||||| |  |||| || |||||||||| ||||| || ||||||||||    
T  22020820 tttgaagaaactaaattagcccacctaaattaacactggagagaatcgaatctgagacttcaaggaggagcacactcccagatcccaagctaataccact 22020919  T
Q  358 aggccaacccaagtgggtt 376  Q
    | ||||||||||| |||||    
T  22020920 atgccaacccaagagggtt 22020938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 335
Target Start/End: Complemental strand, 29173604 - 29173531
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcc 335  Q
    |||||||||| |||||||||||||||||||| |  |||||||||||||||| |||| ||||| || ||||||||    
T  29173604 aagaagctaaattagcccacctaaattgacaccagagataatcgaacctgaaacctcgaggaggagcacactcc 29173531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 21589406 - 21589288
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||||||||||||  |||||||||||||||| || |  ||  ||||||||||||||| | |||||  | || |||||||  |||| ||  ||||||||     
T  21589406 tttgaagaagctaaactagcccacctaaattggcaccagagggaatcgaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccacc 21589307  T
Q  358 aggccaacccaagtgggtt 376  Q
    |||||||||||||||||||    
T  21589306 aggccaacccaagtgggtt 21589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 87424 - 87499
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||| |||||||||||| ||||| || |||||||||| || || ||  |||||||||||||||||| |||||||||    
T  87424 aatcaaacctgagaccttgaggaggagcacactcccagattccaaggcaataccactaggccaaccgaagtgggtt 87499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 258 - 369
Target Start/End: Original strand, 1410619 - 1410728
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||| |||  |||||||| |  ||| ||||||| ||||||||| ||||| || |||||||||| ||||| ||| ||||||||     
T  1410619 tttgaagaagctaaattagcctacc-caattgacaccacagagaatcgaa-ctgagacctcgaggaggagcacactcccatatcccaagtcaataccacc 1410716  T
Q  358 aggccaacccaa 369  Q
    || |||||||||    
T  1410717 agaccaacccaa 1410728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 273 - 372
Target Start/End: Original strand, 43241655 - 43241754
Alignment:
Q  273 ttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtg 372  Q
    |||| ||| |||||||| ||||  ||| ||| |||||||||||||  ||||||  |||||||| | ||||| ||| ||||||||||| ||||||||||||    
T  43241655 ttagtccagctaaattggcatcgaagagaattgaacctgagacctcaaggaagggcacactccaagatcccaagtcaataccactagaccaacccaagtg 43241754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 258 - 337
Target Start/End: Complemental strand, 43442314 - 43442235
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactccca 337  Q
    ||||||||| |||| |||||||| | ||||||||| |  ||| ||||||||||||||||| ||||| || ||||||||||    
T  43442314 tttgaagaaactaaattagcccatccaaattgacaacagagagaatcgaacctgagaccttgaggaggagcacactccca 43442235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 24907607 - 24907542
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 323  Q
    |||||| ||||||| ||||||||||||||||| ||||   ||||||||||||||||| || |||||    
T  24907607 tttgaataagctaaattagcccacctaaattggcatcaaggataatcgaacctgagaacttgagga 24907542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 373
Target Start/End: Complemental strand, 18437160 - 18437088
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgg 373  Q
    ||||||||| || || | ||||| || ||||||| ||| |||| |||||||||||||||||||||| ||||||    
T  18437160 aatcgaacccgaaactttgaggaggagcacactctcaagtcccaagttaataccactaggccaacctaagtgg 18437088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 377
Target Start/End: Complemental strand, 19043529 - 19043457
Alignment:
Q  305 gaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 377  Q
    ||||||||||| | ||| | || ||||||||||| | || ||| |||| ||||||||||||||||||||||||    
T  19043529 gaacctgagactttgagaaggaacacactcccaagttccaagtcaatagcactaggccaacccaagtgggtta 19043457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 376
Target Start/End: Complemental strand, 14285236 - 14285161
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    ||||||||||||||||| ||||| || ||||||||||  | || ||  ||| ||||| ||||||||||||||||||    
T  14285236 aatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaattccactcggccaacccaagtgggtt 14285161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 372
Target Start/End: Complemental strand, 16436692 - 16436622
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtg 372  Q
    |||||||| |||||||| ||||| || |||||||| || |||| ||  ||||||||||||||||||||||||    
T  16436692 aatcgaacatgagaccttgaggaggagcacactcc-aagtcccaagccaataccactaggccaacccaagtg 16436622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 376
Target Start/End: Original strand, 18169793 - 18169905
Alignment:
Q  259 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccacta 358  Q
    ||||||||||||| ||||||||||||| ||| || |  ||| |||||||||| |||||  || || ||||||||||||| ||||| ||| ||||||   |    
T  18169793 ttgaagaagctaaattagcccacctaatttggca-ctgagagaatcgaacct-agaccacgaagaggaccacactcccagatcccaagtcaatacc---a 18169887  T
Q  359 ggccaacccaagtgggtt 376  Q
    ||||||| ||||||||||    
T  18169888 ggccaactcaagtgggtt 18169905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 21549138 - 21549213
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||||||| |||||| |  |||| || ||||||||||  |||| ||  ||||||||||||||||||||||||||||    
T  21549138 aatcgaacttgagactttaaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 26078052 - 26078127
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    ||||||||||||||||| || ||  | || |||||||| |||| |   ||||||||||||||||||||||||||||    
T  26078052 aatcgaacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccactaggccaacccaagtgggtt 26078127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 30883203 - 30883274
Alignment:
Q  305 gaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||| |||||||| ||||| || ||||||||||  |||| ||  ||||||||||| ||||||||||||||||    
T  30883203 gaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggtt 30883274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 376
Target Start/End: Complemental strand, 34984881 - 34984806
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||||||||| |||||| ||||| || ||||||||||  | || ||  ||||||||||| ||||||||||||||||    
T  34984881 aatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggtt 34984806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 35705103 - 35705045
Alignment:
Q  259 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacct 317  Q
    ||||||||||||| |||||||||| ||||||||| |   || |||||||||||||||||    
T  35705103 ttgaagaagctaaattagcccacccaaattgacaccggggagaatcgaacctgagacct 35705045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 378
Target Start/End: Original strand, 7918518 - 7918547
Alignment:
Q  349 aataccactaggccaacccaagtgggttat 378  Q
    ||||||||||||||||||||||||||||||    
T  7918518 aataccactaggccaacccaagtgggttat 7918547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 5390853 - 5390926
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    ||||||||||||||||| ||||| || |||  ||||||  ||| ||  ||||||||||||||||||||| ||||||    
T  5390853 aatcgaacctgagacctcgaggaggagcac--tcccaagccccaagccaataccactaggccaacccaaatgggtt 5390926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 314
Target Start/End: Complemental strand, 10054165 - 10054109
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgaga 314  Q
    |||||||||||||| |||||||||| || |||| |||  ||| ||||||||||||||    
T  10054165 tttgaagaagctaaattagcccacccaagttgatatcggagagaatcgaacctgaga 10054109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 373
Target Start/End: Original strand, 14804671 - 14804743
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgg 373  Q
    |||||||||| |||| ||||| | || ||||||| |||||||| |   |||| ||||||||||||||||||||    
T  14804671 aatcgaacctaagacttagagaaggaacacactcacaaatcccaaaccaataacactaggccaacccaagtgg 14804743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 262 - 376
Target Start/End: Complemental strand, 968476 - 968362
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    |||||||||| ||||||||||||||||| ||||  ||| ||||||||||||||||| ||||| || ||||||||||  |||| ||  |||||||| ||||    
T  968476 aagaagctaaattagcccacctaaattggcatcggagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggc 968377  T
Q  362 caacccaagtgggtt 376  Q
    |||| ||||||||||    
T  968376 caactcaagtgggtt 968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 268 - 377
Target Start/End: Original strand, 23361617 - 23361726
Alignment:
Q  268 ctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaaccc 367  Q
    |||| |||||||||||||||||||| |  ||| ||| ||||||||||||| ||||| || |||||||||| ||||| ||| |||||||| ||| ||||||    
T  23361617 ctaaattagcccacctaaattgacaccagagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaaccc 23361716  T
Q  368 aagtgggtta 377  Q
    ||||||||||    
T  23361717 aagtgggtta 23361726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 16852458 - 16852340
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||||||||||||  |||||||||||||||| ||     || ||||||||||||||||| ||||| || ||||||||||  |||| ||  |||||||||    
T  16852458 tttgaagaagctaaaatagcccacctaaattggcactaaggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccact 16852359  T
Q  358 aggccaacccaagtgggtt 376  Q
    |||||||||||||||||||    
T  16852358 aggccaacccaagtgggtt 16852340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 44780072 - 44780190
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||||| |||||||||    ||  |||| |||||||||||| ||||| || ||||||||||| |||| ||  ||| |||||    
T  44780072 tttgaagaagctaaattagcccacccaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaagccaatgccact 44780171  T
Q  358 aggccaacccaagtgggtt 376  Q
    |||||||||||||||||||    
T  44780172 aggccaacccaagtgggtt 44780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 379
Target Start/End: Complemental strand, 3624697 - 3624577
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||| ||||||| |||||||||||||||||||  |  ||| ||||||||||||||||| || || || ||||||||||  |||| ||  |||||||||    
T  3624697 tttgaaaaagctaaattagcccacctaaattgacc-cggagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccact 3624599  T
Q  358 aggccaacccaagtgggttatg 379  Q
    ||||||||||||||||| ||||    
T  3624598 aggccaacccaagtgggctatg 3624577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 11819894 - 11819775
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||||| |||||||||    ||  ||||||||||||||||| ||||| || ||||||||||| |||| ||   ||||||||    
T  11819894 tttgaagaagctaaattagcccacccaaattgacactagagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccact 11819795  T
Q  358 aggccaacccaagtgggtta 377  Q
    ||| |||||||| |||||||    
T  11819794 agggcaacccaaatgggtta 11819775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 258 - 374
Target Start/End: Complemental strand, 2203610 - 2203494
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||| ||||||| |||||||||| |||||| || |   || ||| || |||||||||| ||||| || ||||||||||  |||| ||  |||||||||    
T  2203610 tttgaataagctaaattagcccacccaaattggcaccggggagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaataccact 2203511  T
Q  358 aggccaacccaagtggg 374  Q
    |||||||||||||||||    
T  2203510 aggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 19703488 - 19703563
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    ||||||||||||||||| ||||| || ||||||| ||  |||| ||  ||||||||||||||||||||||||||||    
T  19703488 aatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggtt 19703563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 376
Target Start/End: Original strand, 20994419 - 20994534
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaag-accacactcccaaatccctagttaataccactagg 360  Q
    |||||||||| |||||||| | ||||||  | |  |||||||||| |||||||| | |||| || | ||||||||||  |||| ||| ||||||||||||    
T  20994419 aagaagctaaattagcccatccaaattggtaccagagataatcgatcctgagactttgagggaggagcacactcccaggtcccaagtcaataccactagg 20994518  T
Q  361 ccaacccaagtgggtt 376  Q
    ||||||||||||||||    
T  20994519 ccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 8059750 - 8059632
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||||||||||||  |||| |||  |||||||||||   || ||| ||||||||||||| ||||| || ||||||| || || || ||| |||||||      
T  8059750 tttgaagaagctaaactagctcactcaaattgacatcagggagaatggaacctgagaccttgaggaggatcacactctcacatgccaagtcaataccatc 8059651  T
Q  358 aggccaacccaagtgggtt 376  Q
    |||||||||||||||||||    
T  8059650 aggccaacccaagtgggtt 8059632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 8485117 - 8484999
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| ||||||||||||||||| || |  ||| |||||||  ||||||||  | || || ||||||| ||  |||| ||  ||||||||     
T  8485117 tttgaagaagctaaattagcccacctaaattggcaccggagagaatcgaaaatgagacctcaaagaggagcacactcacaggtcccaagcaaataccacc 8485018  T
Q  358 aggccaacccaagtgggtt 376  Q
    |||||||||||||||||||    
T  8485017 aggccaacccaagtgggtt 8484999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 18540416 - 18540298
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| ||| ||| |  |||||| || |  ||| ||||||||||||||||| |||||  |  |||||||||  |||| ||  |||||||||    
T  18540416 tttgaagaagctaaattaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccact 18540317  T
Q  358 aggccaacccaagtgggtt 376  Q
    |||||||||||||||||||    
T  18540316 aggccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 28783178 - 28783060
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||||| |||||| || |   || |||||||| |||||||| ||||| || ||||||||||  || | ||  ||||||||     
T  28783178 tttgaagaagctaaattagcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccacc 28783079  T
Q  358 aggccaacccaagtgggtt 376  Q
    | |||||||||||||||||    
T  28783078 aagccaacccaagtgggtt 28783060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 29431129 - 29431011
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||||  |||||  || |  ||| ||||||||||||| |||  |||| || ||||||||||| |||| ||  |||||| |     
T  29431129 tttgaagaagctaaattagcccactcaaattagcaccaaagagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaataccgcc 29431030  T
Q  358 aggccaacccaagtgggtt 376  Q
    |||||||||||||||||||    
T  29431029 aggccaacccaagtgggtt 29431011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 375
Target Start/End: Original strand, 29858007 - 29858124
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||| ||||||| ||||||||||||||||| || |   |  ||||||||||||||||| ||||| || |||||||||   |||| ||  ||||||||     
T  29858007 tttgaaaaagctaaattagcccacctaaattggcaccgaggggaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccacc 29858106  T
Q  358 aggccaacccaagtgggt 375  Q
    ||||||| ||||||||||    
T  29858107 aggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 4830605 - 4830487
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||  ||| | ||||||||| | || | | | ||||||||||||| ||||| || ||||||| || ||||| |   ||||||||     
T  4830605 tttgaagaagctaaattaatccatccaaattgacaccgtataaatttgaacctgagacctcgaggaggaacacactctcagatcccaaacaaataccacc 4830506  T
Q  358 aggccaacccaagtgggtt 376  Q
    |||||||||||||||||||    
T  4830505 aggccaacccaagtgggtt 4830487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 301 - 378
Target Start/End: Complemental strand, 27750805 - 27750728
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 378  Q
    ||||||||||||||||| ||||| || ||||||||||| |||| ||   ||||||| ||| |||||||| ||||||||    
T  27750805 aatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccacgagggcaacccaaatgggttat 27750728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 376
Target Start/End: Original strand, 6569755 - 6569847
Alignment:
Q  284 aaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    ||||||||| |  ||| |||||||| ||| ||||| |||| || |||||||||| ||||| ||  |||| ||||||||||||| |||||||||    
T  6569755 aaattgacaccaaagagaatcgaacatgaaacctaaaggaggagcacactcccagatcccaagccaatatcactaggccaacctaagtgggtt 6569847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 365
Target Start/End: Original strand, 35690037 - 35690129
Alignment:
Q  273 ttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaac 365  Q
    |||||| || |||||||||| |  ||| ||||||||||||||||| ||||| || || || |||| ||||| ||  |||||||||||||||||    
T  35690037 ttagcctacttaaattgacaccagagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaataccactaggccaac 35690129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 3826778 - 3826853
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||||||||||||| || | ||| || ||||||| |||||  | ||  ||||||||||||||||||||||||||||    
T  3826778 aatcgaacctgagatctcgtggaggagcacactctcaaatggcaagccaataccactaggccaacccaagtgggtt 3826853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 11518835 - 11518954
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||| || |||| |||||||||  ||||||||||  |||  |||||||||| |||||| ||||| |   |||||||||| | || ||   ||||||||    
T  11518835 tttgaataaactaaattagcccactcaaattgacattatagtgaatcgaacctaagaccttgaggaggggtacactcccaagttccaagcctataccact 11518934  T
Q  358 aggccaacccaagtgggtta 377  Q
    |||| |||||||||||||||    
T  11518935 aggctaacccaagtgggtta 11518954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 30483889 - 30483960
Alignment:
Q  305 gaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||||||||||   ||||| || |||||||||| ||||| ||  ||||||||| ||||||||||||||||||    
T  30483889 gaacctgagactctgaggaggagcacactcccatatcccaagccaataccactgggccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 35641902 - 35641977
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    ||||||||||||||| | ||||| || |||||||||||||| | ||   ||||||| || ||||||||||||||||    
T  35641902 aatcgaacctgagacatcgaggaggagcacactcccaaatctcaagccgataccaccagaccaacccaagtgggtt 35641977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 335
Target Start/End: Complemental strand, 6536635 - 6536561
Alignment:
Q  261 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcc 335  Q
    ||||||||||| ||| ||||||||||||| || |  ||| ||| ||||||||||||| ||||| || ||||||||    
T  6536635 gaagaagctaaattaacccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcc 6536561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 292
Target Start/End: Complemental strand, 7347955 - 7347921
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgaca 292  Q
    |||||||||||||| ||||||||||||||||||||    
T  7347955 tttgaagaagctaaattagcccacctaaattgaca 7347921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 304 - 378
Target Start/End: Original strand, 23874386 - 23874460
Alignment:
Q  304 cgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 378  Q
    |||||||||||||| ||||| |  || | |||||  |||| ||  ||||||||||||||||||||||||||||||    
T  23874386 cgaacctgagacctcgaggaggcgcagattcccaggtcccaagccaataccactaggccaacccaagtgggttat 23874460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 283 - 369
Target Start/End: Complemental strand, 42740587 - 42740501
Alignment:
Q  283 taaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaa 369  Q
    |||||||||| |  ||| ||| ||||||||||||| ||||| || || ||||||||||  | || |||||||||||| |||||||||    
T  42740587 taaattgacaccagagagaattgaacctgagaccttgaggatgatcaaactcccaaatttcaagctaataccactagaccaacccaa 42740501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 376
Target Start/End: Original strand, 3058009 - 3058125
Alignment:
Q  259 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccacta 358  Q
    ||||||||||||| | |||||||||||||||||  |  ||| ||||||||||||||||| |  || || |||||||||||  ||| |   |||||||| |    
T  3058009 ttgaagaagctaaat-agcccacctaaattgacgccgaagagaatcgaacctgagaccttgcagaggagcacactcccaagacccaaaccaataccacca 3058107  T
Q  359 ggccaacccaagtgggtt 376  Q
    | ||||||||| ||||||    
T  3058108 gaccaacccaaatgggtt 3058125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 3305146 - 3305231
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccc 343  Q
    |||| ||||| ||| ||||||||||||||||| || |  |||||||||||  |||||||| ||||| || ||| |||||| |||||    
T  3305146 tttgcagaagataaattagcccacctaaattggcaccagagataatcgaatttgagaccttgaggaggagcacgctcccagatccc 3305231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 338
Target Start/End: Original strand, 16843753 - 16843832
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaa 338  Q
    |||||||||||||| | |||||| ||||||||||| |  ||| |||||||||||||| || | ||| || |||||||||||    
T  16843753 tttgaagaagctaaat-agcccatctaaattgacaccggagagaatcgaacctgagatcttgcggaggagcacactcccaa 16843832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 262 - 376
Target Start/End: Complemental strand, 33549218 - 33549104
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    |||||||||| ||||| ||||||||||| ||||| ||| ||||||||||||||||| ||||| || ||||||||||  |||| ||  |||||||| || |    
T  33549218 aagaagctaaattagctcacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagac 33549119  T
Q  362 caacccaagtgggtt 376  Q
    |||||||||||||||    
T  33549118 caacccaagtgggtt 33549104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 258 - 375
Target Start/End: Original strand, 6758380 - 6758497
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| || ||||||||||||||||| |  ||| |||||| | |||||||| ||||  || |||||||||||||||  ||  ||||||||     
T  6758380 tttgaagaagctaaatttgcccacctaaattgacaccagagagaatcgatcttgagacctcgaggtggagcacactcccaaatcctaagccaataccacc 6758479  T
Q  358 aggccaacccaagtgggt 375  Q
    |||||||| |||||||||    
T  6758480 aggccaacacaagtgggt 6758497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 377
Target Start/End: Complemental strand, 12633124 - 12633008
Alignment:
Q  261 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 360  Q
    ||||||||||| |||| |||| |||||||||||   ||| |||||||| ||||| || || || || |||||||||||||||| ||| |||| |||  ||    
T  12633124 gaagaagctaaattagtccacttaaattgacattggagagaatcgaacatgagatctcgaagaggagcacactcccaaatcccaagtcaatatcaccggg 12633025  T
Q  361 ccaacccaagtgggtta 377  Q
     ||||||||||||||||    
T  12633024 acaacccaagtgggtta 12633008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 262 - 376
Target Start/End: Original strand, 12234469 - 12234583
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    |||||||||| ||| |||| |||||||||||    ||| ||||||||||||||||| |||   || ||||||||||  |||| ||| |||||||| ||||    
T  12234469 aagaagctaaattatcccatctaaattgacactggagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggc 12234568  T
Q  362 caacccaagtgggtt 376  Q
    ||||| |||||||||    
T  12234569 caacctaagtgggtt 12234583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 21418588 - 21418470
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| ||||||||||| ||||| ||     || |||||||| |||||| | ||||| || ||||||||||| |||| ||  ||||||||     
T  21418588 tttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagccaataccacc 21418489  T
Q  358 aggccaacccaagtgggtt 376  Q
    |||||||||||| ||||||    
T  21418488 aggccaacccaactgggtt 21418470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 31622949 - 31623067
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||||| ||||||||| |  ||  | || |||||||||||| ||||| || ||||||||||  |||| ||  ||||||||     
T  31622949 tttgaagaagctaaattagcccacccaaattgacaccggagtgattcaaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccacc 31623048  T
Q  358 aggccaacccaagtgggtt 376  Q
     | ||||||||||||||||    
T  31623049 ggaccaacccaagtgggtt 31623067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 1056643 - 1056762
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| ||| ||||||||| ||| || |  ||| |||||||| | | |||| ||||| || || |||||||| ||||  |  |||||||||    
T  1056643 tttgaagaagctaaattaacccacctaacttggcaccagagagaatcgaacttaaaaccttgaggatgagcatactcccaagtcccaggccaataccact 1056742  T
Q  358 aggccaacccaagtgggtta 377  Q
    ||| ||||||||||||||||    
T  1056743 aggtcaacccaagtgggtta 1056762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 12188304 - 12188379
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||||||| ||| |||| ||||| || ||||||||||  |||| ||  ||||||||||||||||||||||||||||    
T  12188304 aatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 12188379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 376
Target Start/End: Complemental strand, 14558080 - 14557962
Alignment:
Q  257 gtttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccac 356  Q
    ||||||||||||||| |||| ||||| ||||||||| ||  || ||||||||||||||||  ||||| || |||||| |||  |||| ||  || |||||    
T  14558080 gtttgaagaagctaaattagaccacccaaattgaca-ccgggagaatcgaacctgagacccggaggaggagcacacttccaggtcccaagccaacaccac 14557982  T
Q  357 taggccaacccaagtgggtt 376  Q
     || ||||||||||||||||    
T  14557981 cagaccaacccaagtgggtt 14557962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 30127518 - 30127399
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||| |||||||| ||| || |||||||||| || |  | | ||||||||||||||||| || || || |||||||||| | ||| ||  ||||||||     
T  30127518 tttgaggaagctaaattaacctacctaaattggcaccggaaagaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccacc 30127419  T
Q  358 aggccaacccaagtgggtta 377  Q
    || |||||||||||||||||    
T  30127418 agaccaacccaagtgggtta 30127399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 377
Target Start/End: Complemental strand, 11423641 - 11423565
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 377  Q
    ||||||||||||||||| |||||  | || ||||||||||||| ||| |||||||| || ||| |||||| ||||||    
T  11423641 aatcgaacctgagacctcgaggagaagcatactcccaaatcccaagtcaataccaccagaccagcccaagcgggtta 11423565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 377
Target Start/End: Complemental strand, 3715566 - 3715451
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    |||||||||| | ||||||||||||||||||    ||| |||||||| |||||||| || ||  | || ||||||| ||| | ||| ||||||||||| |    
T  3715566 aagaagctaaatcagcccacctaaattgacactggagagaatcgaacttgagacctcgacgagaagcatactcccagatctcaagtcaataccactagcc 3715467  T
Q  362 caacccaagtgggtta 377  Q
    ||||| || |||||||    
T  3715466 caaccaaaatgggtta 3715451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 365
Target Start/End: Complemental strand, 28364055 - 28363948
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||  ||| |||||||| | ||||||||| |  ||||||||||| ||||||||| ||||| || ||||||| || ||||| |   |||||||||    
T  28364055 tttgaagaaattaaattagcccatccaaattgacaccagagataatcgaatctgagaccttgaggaggagcacactcgcagatcccaaaccaataccact 28363956  T
Q  358 aggccaac 365  Q
    | ||||||    
T  28363955 atgccaac 28363948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 374
Target Start/End: Original strand, 32613100 - 32613214
Alignment:
Q  260 tgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactag 359  Q
    ||||||||||||  ||| |||  ||||||||||    ||| |||||||| ||||| || ||| | || |||||||||| | ||| ||| |||||||| ||    
T  32613100 tgaagaagctaaactagtccatttaaattgacactgaagagaatcgaacatgagatcttgagaaggagcacactcccagaccccaagtcaataccaccag 32613199  T
Q  360 gccaacccaagtggg 374  Q
    |||||||||||||||    
T  32613200 gccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 273 - 317
Target Start/End: Complemental strand, 12216847 - 12216803
Alignment:
Q  273 ttagcccacctaaattgacatcctagataatcgaacctgagacct 317  Q
    ||||||||||||||||||||  | ||| |||||||||||||||||    
T  12216847 ttagcccacctaaattgacagtcaagagaatcgaacctgagacct 12216803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 7949412 - 7949530
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||||||||||||||| |  ||| ||||||||||||||||| ||||| || |||||||| |  |||| ||  |||||| ||    
T  7949412 tttgaagaagctaaattagcccacctaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccgct 7949511  T
Q  358 aggccaacccaagtgggtt 376  Q
    |||||| ||||||||||||    
T  7949512 aggccagcccaagtgggtt 7949530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 258 - 378
Target Start/End: Complemental strand, 28635814 - 28635694
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||||| |||||| || |  ||| |||||||||| ||||||  |||| || |||||||||| ||||| ||| | ||||||     
T  28635814 tttgaagaagctaaattagcccacccaaattggcaccagagagaatcgaacctaagacctccaggaggagcacactcccagatcccaagtcagtaccacc 28635715  T
Q  358 aggccaacccaagtgggttat 378  Q
    ||| |||||||||||||||||    
T  28635714 aggacaacccaagtgggttat 28635694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 258 - 369
Target Start/End: Original strand, 49576852 - 49576963
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||| |||||||| ||||| ||||||||||   ||| ||||||||||||||||| ||||| || ||||||||||| |||  ||  ||||||||     
T  49576852 tttgaagaagttaagttagtccacccaaattgacattggagagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaataccacc 49576951  T
Q  358 aggccaacccaa 369  Q
    ||||||||||||    
T  49576952 aggccaacccaa 49576963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 376
Target Start/End: Original strand, 21660106 - 21660220
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    |||||||||| |||| | |||||||||||||    |||||||||||| |||||||| |||||||| |||||||||| ||| | ||| |||||||| || |    
T  21660106 aagaagctaaattagtctacctaaattgacactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagac 21660205  T
Q  362 caacccaagtgggtt 376  Q
    |||||||||| ||||    
T  21660206 caacccaagttggtt 21660220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 376
Target Start/End: Original strand, 21668870 - 21668984
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    |||||||||| |||| | |||||||||||||    |||||||||||| |||||||| |||||||| |||||||||| ||| | ||| |||||||| || |    
T  21668870 aagaagctaaattagtctacctaaattgacactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagac 21668969  T
Q  362 caacccaagtgggtt 376  Q
    |||||||||| ||||    
T  21668970 caacccaagttggtt 21668984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 377
Target Start/End: Original strand, 37109352 - 37109428
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 377  Q
    ||||||||||||||||| ||||| || ||||||||||  |||| ||  |||||||||||||||||||||||||||||    
T  37109352 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 37109428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 19680789 - 19680864
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||||||||| |||||| |||||||| ||||||||||| |||| ||  |||||||||||||||| |||||||||||    
T  19680789 aatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccactaggccaatccaagtgggtt 19680864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 8030162 - 8030280
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||||| |||||||||    ||  |||||||| |||||||| ||||| || ||||||||||| |||| ||   ||||||||    
T  8030162 tttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcctataccact 8030261  T
Q  358 aggccaacccaagtgggtt 376  Q
    ||| ||| |||||||||||    
T  8030262 agggcaatccaagtgggtt 8030280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 51954232 - 51954134
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccac 356  Q
    |||||||||||||| |||||||||| ||||||||| |  |||||||| |||||||||||| ||||| || || |||||||| |||| ||| ||| ||||    
T  51954232 tttgaagaagctaaattagcccacccaaattgacaccggagataatcaaacctgagacctcgaggaggagcatactcccaagtcccaagtcaatgccac 51954134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 301 - 377
Target Start/End: Original strand, 19238578 - 19238654
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 377  Q
    ||||||||| ||||||| ||||| || ||||||||||| |||| ||  |||||||| ||||||||||||||||||||    
T  19238578 aatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgggtta 19238654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 262 - 378
Target Start/End: Complemental strand, 31826723 - 31826607
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    |||||| ||| |||||||||| |||||||||    ||  |||||||| |||||||| ||||| || ||||||| |||||||| ||   |||||||||||     
T  31826723 aagaaggtaaattagcccacccaaattgacactaaagggaatcgaacttgagaccttgaggaggagcacactcgcaaatcccaagcctataccactaggg 31826624  T
Q  362 caacccaagtgggttat 378  Q
    |||||||||||||||||    
T  31826623 caacccaagtgggttat 31826607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 37274417 - 37274537
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaa-taccac 356  Q
    |||||||||||||| ||||||||| ||||||  || |  ||| |||||||||| |||||| ||||| || ||||||||||  |||| ||  || ||| ||    
T  37274417 tttgaagaagctaaattagcccacttaaattagcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaattacgac 37274516  T
Q  357 taggccaacccaagtgggtta 377  Q
    |||||||||||||||||||||    
T  37274517 taggccaacccaagtgggtta 37274537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 258 - 378
Target Start/End: Complemental strand, 46545829 - 46545709
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||| || |||| |||| ||| |||||||||||||  ||| ||||||| |||||| || ||||| || ||||||| ||  || | ||  |||||||||    
T  46545829 tttgaaaaaactaaattagtccatctaaattgacatcagagaaaatcgaatctgagatcttgaggaggagcacactctcaggtctcaagccaataccact 46545730  T
Q  358 aggccaacccaagtgggttat 378  Q
    |||||||||||||||||||||    
T  46545729 aggccaacccaagtgggttat 46545709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 376
Target Start/End: Original strand, 37720171 - 37720290
Alignment:
Q  257 gtttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccac 356  Q
    ||||||||||||||| ||||||||||||||||||   |   || ||||||||||| ||||| ||||| |  ||||||||||  |||| ||  |||| |||    
T  37720171 gtttgaagaagctaaattagcccacctaaattgatccctgggagaatcgaacctgggaccttgaggaggggcacactcccaggtcccaagccaataacac 37720270  T
Q  357 taggccaacccaagtgggtt 376  Q
     |||||||||||||||||||    
T  37720271 caggccaacccaagtgggtt 37720290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 262 - 376
Target Start/End: Original strand, 18404845 - 18404959
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    ||||||||||  || ||||| |||||||||| | |||||||||||||||||||| | || || ||  | | ||||||||||| ||| ||||||||||  |    
T  18404845 aagaagctaaactaacccacttaaattgacaccttagataatcgaacctgagacattgatgaggagtatattcccaaatcccaagtcaataccactaaac 18404944  T
Q  362 caacccaagtgggtt 376  Q
    |||||||| ||||||    
T  18404945 caacccaaatgggtt 18404959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 262 - 376
Target Start/End: Original strand, 51250484 - 51250598
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    |||||||||| |||||||||| |||||| || |  ||  |||||||| ||||| || ||||  || |||||||||| ||||| ||  |||||||| ||||    
T  51250484 aagaagctaaattagcccacccaaattggcaccggagggaatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggc 51250583  T
Q  362 caacccaagtgggtt 376  Q
    |||||||||||||||    
T  51250584 caacccaagtgggtt 51250598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 301 - 378
Target Start/End: Complemental strand, 47044792 - 47044715
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 378  Q
    ||||||||||||||||| ||||| || || |||| || ||||| ||| |||||||| ||||||| |||||||||||||    
T  47044792 aatcgaacctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggttat 47044715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 377
Target Start/End: Original strand, 9936926 - 9937038
Alignment:
Q  265 aagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaa 364  Q
    ||||||| ||| |||||| ||||||||| |   || |||||||||||| || | ||||| || ||||||||||| || | |||  |||||||||||||||    
T  9936926 aagctaaattaacccacccaaattgacaacggtgagaatcgaacctgaaacttcgaggaggagcacactcccaagtctcaagtcgataccactaggccaa 9937025  T
Q  365 cccaagtgggtta 377  Q
    ||||||| |||||    
T  9937026 cccaagtaggtta 9937038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 377
Target Start/End: Original strand, 31759659 - 31759735
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 377  Q
    ||||||| ||||||||| ||||| || ||||||||||| |||| ||  |||||||||||  ||||||||||||||||    
T  31759659 aatcgaatctgagaccttgaggaggagcacactcccaagtcccaagccaataccactagatcaacccaagtgggtta 31759735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 45061096 - 45060977
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||| |  |||||||  ||||||||||||  |||||||||||  ||||| || ||  | ||  ||||| ||||| ||| ||| |||||||||    
T  45061096 tttgaagaagctcaactagcccatttaaattgacatcgaagataatcgaatttgagatcttgaacaggagtacacttccaaaccccaagtcaataccact 45060997  T
Q  358 aggccaacccaagtgggtta 377  Q
    ||| ||||||||||||||||    
T  45060996 aggtcaacccaagtgggtta 45060977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 265 - 376
Target Start/End: Original strand, 55427165 - 55427276
Alignment:
Q  265 aagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaa 364  Q
    ||||||| |||||||||| |||||| || |   || ||||||||||||||||| ||| | || || |||||||  |||| ||  |||||||| |||||||    
T  55427165 aagctaaattagcccacccaaattggcaccgcggagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaa 55427264  T
Q  365 cccaagtgggtt 376  Q
    ||||||||||||    
T  55427265 cccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 2622396 - 2622475
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctag----ttaataccactaggccaacccaagtgggtt 376  Q
    ||||||||||||||| | ||||| || ||||||||||  |||| ||    ||||||||||||||||||||||||||||||    
T  2622396 aatcgaacctgagacatggaggaggagcacactcccaggtcccaagccaattaataccactaggccaacccaagtgggtt 2622475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 359
Target Start/End: Complemental strand, 13015538 - 13015444
Alignment:
Q  265 aagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactag 359  Q
    ||||||| ||| |||||||||||||||| |  ||| |||||||| |||||| | ||||| || ||||||||||| |||| ||  |||||||||||    
T  13015538 aagctaaattaacccacctaaattgacacctgagagaatcgaacatgagacttcgaggaggagcacactcccaagtcccaagccaataccactag 13015444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 262 - 377
Target Start/End: Complemental strand, 37443813 - 37443701
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    ||||| |||| ||||||||| ||||||| || |  |||||||||||| ||| |||| |||||  ||   ||||||| ||||| ||  ||||||||||||     
T  37443813 aagaaactaaattagcccacataaattggcaccagagataatcgaacatgaaacctcgaggagtac---actcccagatcccaagccaataccactaggt 37443717  T
Q  362 caacccaagtgggtta 377  Q
    ||||||||||||||||    
T  37443716 caacccaagtgggtta 37443701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 27965538 - 27965586
Alignment:
Q  328 cacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||||||||| ||||| ||  ||||||||||||||||||||||||||||    
T  27965538 cacactcccagatcccaagccaataccactaggccaacccaagtgggtt 27965586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 361
Target Start/End: Complemental strand, 38869843 - 38869783
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    ||||||||||||||||| ||||| || |||||||||| ||||| ||  |||||||||||||    
T  38869843 aatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaataccactaggc 38869783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 376
Target Start/End: Complemental strand, 4249252 - 4249177
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||| |||||||||||| ||||| || |||||||| ||||||| ||   ||||||||||||||| | |||||||||    
T  4249252 aatcaaacctgagaccttgaggaggagcacactccaaaatcccaagcctataccactaggccaagcgaagtgggtt 4249177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 378
Target Start/End: Original strand, 9241028 - 9241103
Alignment:
Q  303 tcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 378  Q
    |||||||| |||||| ||| | || |||||| ||| ||||| ||  |||||||| |||||||||||||||||||||    
T  9241028 tcgaacctcagacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggttat 9241103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 376
Target Start/End: Complemental strand, 39509145 - 39509070
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    ||||||||||||||||| ||||| || |||||||||| ||||| ||  | |||||  || ||||||||||||||||    
T  39509145 aatcgaacctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaacccaagtgggtt 39509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 372
Target Start/End: Complemental strand, 13901860 - 13901746
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| ||| |||||||||||| ||||   | | ||| |||| ||||||||  |||| || ||||||||||  || | ||  |||||||||    
T  13901860 tttgaagaagctaaattaacccacctaaattaacattagatagaattgaacttgagacctcaaggaggaacacactcccaggtctcaagccaataccact 13901761  T
Q  358 aggccaacccaagtg 372  Q
    || ||||||||||||    
T  13901760 agaccaacccaagtg 13901746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 343
Target Start/End: Original strand, 24124052 - 24124098
Alignment:
Q  297 agataatcgaacctgagacctagaggaagaccacactcccaaatccc 343  Q
    |||||||||||||| ||||||  |||| |||||||||||||||||||    
T  24124052 agataatcgaacctcagacctcaaggaggaccacactcccaaatccc 24124098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 372
Target Start/End: Complemental strand, 24234762 - 24234649
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||| ||||||| |||||| |||||| ||||| ||  ||| |||||||| ||||||||  |||| || ||||||||||| |||| ||  ||||||||     
T  24234762 tttgaataagctaaattagcctacctaatttgac-tctgagagaatcgaacttgagaccttcaggatgagcacactcccaagtcccaagccaataccacc 24234664  T
Q  358 aggccaacccaagtg 372  Q
     || |||||||||||    
T  24234663 tggacaacccaagtg 24234649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 47386750 - 47386808
Alignment:
Q  259 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacct 317  Q
    ||||||||||||| ||||||||||||||||||||    ||| ||| |||||||||||||    
T  47386750 ttgaagaagctaaattagcccacctaaattgacactagagagaattgaacctgagacct 47386808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 30584783 - 30584836
Alignment:
Q  261 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgaga 314  Q
    |||||| |||| ||||| || |||||||||||||  ||||||||||||||||||    
T  30584783 gaagaaactaaattagctcatctaaattgacatcggagataatcgaacctgaga 30584836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 359
Target Start/End: Original strand, 30938177 - 30938278
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||||||||||||  || ||||||||||||| |||    || ||||||||||||||||| ||||| || |||||||| | ||||| |   |||||||||    
T  30938177 tttgaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatcccaaaccaataccact 30938276  T
Q  358 ag 359  Q
    ||    
T  30938277 ag 30938278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 373
Target Start/End: Original strand, 7292799 - 7292871
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgg 373  Q
    ||||||||||||||| | ||||| || ||||||||||  | || ||  ||||||||||| |||||||||||||    
T  7292799 aatcgaacctgagactttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 42644907 - 42644963
Alignment:
Q  297 agataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaatac 353  Q
    ||||||||||||||||||| | |||||||| ||||||| || ||||| ||| |||||    
T  42644907 agataatcgaacctgagactttgaggaagaacacactctcagatcccaagtcaatac 42644963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 41591 - 41710
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||| ||||| |||||||||| |||||||||||  ||| ||| ||||||||||||| ||||| || || |||| || ||| | ||  |||||||||    
T  41591 tttgaagaggctaaattagcccacccaaattgacatcagagagaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaataccact 41690  T
Q  358 aggccaacccaagtgggtta 377  Q
    ||||||||||||||||||||    
T  41691 aggccaacccaagtgggtta 41710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 6e-20; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 29503388 - 29503271
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| || |||||| |||||||||| ||  || ||||||||||||||||| ||||| || ||||||||||  |||| |   |||||||||    
T  29503388 tttgaagaagctaaatttgcccacttaaattgaca-ccgggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccact 29503290  T
Q  358 aggccaacccaagtgggtt 376  Q
    |||||||||||||||||||    
T  29503289 aggccaacccaagtgggtt 29503271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 262 - 376
Target Start/End: Original strand, 42327357 - 42327471
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    |||| ||||| |||||||||| |||||| || |  ||| ||||||||||||||||| ||||| || ||||||||||  |||| ||  |||||||||||||    
T  42327357 aagatgctaaattagcccacccaaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggc 42327456  T
Q  362 caacccaagtgggtt 376  Q
    |||||||||||||||    
T  42327457 caacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 1435181 - 1435064
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||||| ||||||||| |  ||| |||||||| |||||||| |||||  | |||||||| ||||||| ||  | |||||||    
T  1435181 tttgaagaagctaaattagcccacccaaattgacaccagagagaatcgaac-tgagaccttgaggagaagcacactcctaaatcccaagccagtaccact 1435083  T
Q  358 aggccaacccaagtgggtt 376  Q
    | |||||||||||||||||    
T  1435082 atgccaacccaagtgggtt 1435064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 42602672 - 42602554
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||||| |||||| || |  ||| |||| ||||| |||||| ||| | || ||||||||||  |||| ||  |||||||||    
T  42602672 tttgaagaagctaaattagcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccact 42602573  T
Q  358 aggccaacccaagtgggtt 376  Q
    |||||||||||||||||||    
T  42602572 aggccaacccaagtgggtt 42602554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 11251205 - 11251087
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||| ||| ||| ||||| |||||||||||||| |  ||| |||| |||||||||||| ||||| || |||||| |||| |||| ||  |||||||||    
T  11251205 tttgaataagttaaattagcacacctaaattgacaccagagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaataccact 11251106  T
Q  358 aggccaacccaagtgggtt 376  Q
    | ||||||| |||||||||    
T  11251105 aagccaacctaagtgggtt 11251087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 376
Target Start/End: Complemental strand, 37480193 - 37480075
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||||| ||||||  | |   || ||||||||||||||||| ||||| || ||||||| ||  |||| ||  ||||||||     
T  37480193 tttgaagaagctaaattagcccacccaaattgggaccggggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccacc 37480094  T
Q  358 aggccaacccaagtgggtt 376  Q
    |||||||||||||||||||    
T  37480093 aggccaacccaagtgggtt 37480075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 378
Target Start/End: Original strand, 4438980 - 4439057
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 378  Q
    |||||||| || ||||| ||||| || ||||||| || ||||| ||||||||||| ||||||||||||||||||||||    
T  4438980 aatcgaacatgcgaccttgaggaggagcacactctcagatcccaagttaataccattaggccaacccaagtgggttat 4439057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 376
Target Start/End: Complemental strand, 14500352 - 14500277
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    ||||||| ||||||||||||||| || |||||||||| ||| | || | ||||||||||||||| |||||||||||    
T  14500352 aatcgaatctgagacctagaggaggagcacactcccagatctcaagcttataccactaggccaaaccaagtgggtt 14500277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 377
Target Start/End: Complemental strand, 28846805 - 28846690
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    |||||| ||| |||| | ||| |||||||||||   |||||||||||||||||| | ||||| || ||||||||||  |||| ||| |||||||||||      
T  28846805 aagaagttaaattagtctacccaaattgacatcggtgataatcgaacctgagacatcgaggaggagcacactcccaggtcccaagtcaataccactagat 28846706  T
Q  362 caacccaagtgggtta 377  Q
    ||||| ||||||||||    
T  28846705 caacctaagtgggtta 28846690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 34041589 - 34041664
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||| |||||||||||| ||||| || ||||||| || ||||  ||| ||||||||||||||||||||||||||||    
T  34041589 aatcaaacctgagaccttgaggaggagcacactctcagatcctaagtcaataccactaggccaacccaagtgggtt 34041664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 376
Target Start/End: Complemental strand, 39715067 - 39714992
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    ||||||||||||||||| ||||| || ||||||||||  |||| ||| |||||||| | |||||||||||||||||    
T  39715067 aatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggtt 39714992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 262 - 372
Target Start/End: Complemental strand, 3001493 - 3001383
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    ||||| |||| ||||||||| |||| || || |  |||||||||||||||||| ||  |||| || |||||||| | ||| | ||| |||||||||||||    
T  3001493 aagaacctaaattagcccacataaactggcaccagagataatcgaacctgagatctcaaggaggagcacactcctagatctcaagtcaataccactaggc 3001394  T
Q  362 caacccaagtg 372  Q
    |||||||||||    
T  3001393 caacccaagtg 3001383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 25637269 - 25637184
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccc 343  Q
    |||||||||| ||| ||||||||||||||||| ||||  ||| || |||||||||||||| ||| | || |||||||||| |||||    
T  25637269 tttgaagaagttaaattagcccacctaaattggcatcggagagaaccgaacctgagacctcgagaaggagcacactcccagatccc 25637184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 38854420 - 38854485
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 323  Q
    |||||||||||||| |||||||||||||||||||  |   |||||||||||||||||||| |||||    
T  38854420 tttgaagaagctaaattagcccacctaaattgaccccggtgataatcgaacctgagaccttgagga 38854485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 376
Target Start/End: Complemental strand, 1729880 - 1729816
Alignment:
Q  312 agacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||||||||||| || ||||||||||| |||| ||  ||||||||||| ||||||||||||||||    
T  1729880 agacctagaggaggagcacactcccaagtcccaagccaataccactagcccaacccaagtgggtt 1729816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 377
Target Start/End: Original strand, 23052524 - 23052600
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 377  Q
    ||||||||||||||||| |||||  | ||||||||||| |||| ||  |||||||| ||||||||| ||||||||||    
T  23052524 aatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaataccaccaggccaacctaagtgggtta 23052600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 334
Target Start/End: Complemental strand, 33582091 - 33582015
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactc 334  Q
    |||||||||||||| |||| ||||||||||||||||   ||| |||||||||||||||||  |||| || |||||||    
T  33582091 tttgaagaagctaaattagtccacctaaattgacattagagagaatcgaacctgagacctcaaggaggagcacactc 33582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 377
Target Start/End: Original strand, 40416391 - 40416467
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 377  Q
    |||||||||||||||||  |||| || || |||||||  | || ||| |||||||||||||||||||||||||||||    
T  40416391 aatcgaacctgagaccttaaggaggagcatactcccaggttccaagtcaataccactaggccaacccaagtgggtta 40416467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 7798994 - 7799111
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||| || ||||||| ||    ||| ||||||| |||||| || ||||| || ||||||||||| |||| ||  ||||||||     
T  7798994 tttgaagaagctaaattagcc-acttaaattggcactggagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaataccacc 7799092  T
Q  358 aggccaacccaagtgggtt 376  Q
    ||| |||||||||||||||    
T  7799093 aggacaacccaagtgggtt 7799111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 375
Target Start/End: Original strand, 16918579 - 16918653
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggt 375  Q
    |||| ||||| |||||| ||||| || |||||||||| ||||| |   |||||||||||||||||||||||||||    
T  16918579 aatccaacctaagaccttgaggaggagcacactcccagatcccaaaccaataccactaggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 376
Target Start/End: Original strand, 21195638 - 21195752
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    |||||||||| |||||||| | |||||||||    ||  ||||||||||||||||| ||||| || ||||||||||| | || ||   |||||||||||     
T  21195638 aagaagctaaattagcccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagttccaagcctataccactaggg 21195737  T
Q  362 caacccaagtgggtt 376  Q
    |||||||| ||||||    
T  21195738 caacccaaatgggtt 21195752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 376
Target Start/End: Complemental strand, 26545950 - 26545840
Alignment:
Q  266 agctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaac 365  Q
    |||||| ||| |||||||||||||| |||  ||| |||| ||| |||||||| ||| | || |||||| ||| ||||| || ||||||||| |  |||||    
T  26545950 agctaaattaacccacctaaattgatatcgaagagaatcaaacttgagacctcgagaaggagcacacttccagatcccaagctaataccaccaaaccaac 26545851  T
Q  366 ccaagtgggtt 376  Q
    |||||||||||    
T  26545850 ccaagtgggtt 26545840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 29197334 - 29197452
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||| ||| ||| ||||||||||||||||| || |    | |||||||| |||||| |  |||| || ||||||||||| |||| ||| ||||||||     
T  29197334 tttgaaaaagttaaattagcccacctaaattggcaccgggaagaatcgaacatgagacatcaaggaggagcacactcccaagtcccaagtcaataccacc 29197433  T
Q  358 aggccaacccaagtgggtt 376  Q
    | |||||||||||||||||    
T  29197434 aagccaacccaagtgggtt 29197452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 301 - 378
Target Start/End: Complemental strand, 11062435 - 11062358
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 378  Q
    |||| |||||||||||| |||||  | ||||||||||| | || ||  |||| |||||||||||||||||||||||||    
T  11062435 aatcaaacctgagaccttgaggagaagcacactcccaagttccaagccaatatcactaggccaacccaagtgggttat 11062358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 263 - 376
Target Start/End: Complemental strand, 19244222 - 19244109
Alignment:
Q  263 agaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggcc 362  Q
    |||| |||| |||||||||  |||||| || |  ||| ||||||||||||||||| | ||| || ||||||| ||  |||| ||| ||||||| ||| ||    
T  19244222 agaaactaaattagcccactcaaattggcaccagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaataccagtagacc 19244123  T
Q  363 aacccaagtgggtt 376  Q
    ||||||||||||||    
T  19244122 aacccaagtgggtt 19244109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 38856120 - 38856185
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 323  Q
    |||||||||||||| |||||||| | |||| |||| | ||||||||||||| |||||||| |||||    
T  38856120 tttgaagaagctaaattagcccatcgaaatggacaccgtagataatcgaacatgagaccttgagga 38856185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 385
Target Start/End: Original strand, 5147680 - 5147764
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttatgaaatat 385  Q
    ||||||| | ||||||| ||| | || || ||||||| ||| | ||| ||||||||||| |||||||||||||||||| ||||||    
T  5147680 aatcgaatccgagaccttgagaaggagcatactcccagatctcaagtcaataccactagaccaacccaagtgggttattaaatat 5147764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 31573600 - 31573656
Alignment:
Q  259 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagac 315  Q
    ||||||||| ||| |||| |||||||||||||||||  ||| |||||||||||||||    
T  31573600 ttgaagaagttaaattagtccacctaaattgacatcgaagagaatcgaacctgagac 31573656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 334
Target Start/End: Original strand, 35203341 - 35203417
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactc 334  Q
    |||||||||||||| ||| ||||| |||||||||| |  |||||||||||| |||||| | ||||| || |||||||    
T  35203341 tttgaagaagctaaattaacccacttaaattgacaccaaagataatcgaacatgagactttgaggatgagcacactc 35203417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 376
Target Start/End: Complemental strand, 42922490 - 42922414
Alignment:
Q  301 aatcgaacctgagaccta-gaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||||||||||||||||  ||||| || ||||||||||  | || ||  ||||||||||||||||||||||||||||    
T  42922490 aatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 376
Target Start/End: Original strand, 11738041 - 11738120
Alignment:
Q  297 agataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 376  Q
    |||||||||||||||| || | ||||| || ||||||| || ||| ||||| ||||||||||  ||||| ||||||||||    
T  11738041 agataatcgaacctgaaactttgaggaggaacacactctcagatctctagtcaataccactaatccaactcaagtgggtt 11738120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 376
Target Start/End: Complemental strand, 35916189 - 35916086
Alignment:
Q  273 ttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtg 372  Q
    ||||||||| ||||||||||||   ||  |||||| |||||| || ||||| || |||||||  ||||| | ||| |||||||| || ||||||||||||    
T  35916189 ttagcccacttaaattgacatcgaggaggatcgaatctgagatcttgaggaggaacacactcttaaatctcaagtcaataccaccagaccaacccaagtg 35916090  T
Q  373 ggtt 376  Q
    ||||    
T  35916089 ggtt 35916086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 284 - 378
Target Start/End: Complemental strand, 13803587 - 13803493
Alignment:
Q  284 aaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 378  Q
    |||||| ||||  ||||||||||||||||||||| ||||| || |||||||| || || | ||  |||| ||||||  |||||||| ||||||||    
T  13803587 aaattggcatcagagataatcgaacctgagaccttgaggaggagcacactcctaagtctcaagccaatatcactagatcaacccaaatgggttat 13803493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 21213887 - 21213777
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||||||||| ||  |||||||||||||||| || |   || |||||||||||||||||  |||| || ||||||||||  |||| ||  ||||||||     
T  21213887 tttgaagaagcaaaactagcccacctaaattggcaccggggagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaataccacc 21213788  T
Q  358 aggccaaccca 368  Q
    || ||||||||    
T  21213787 agaccaaccca 21213777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 2311842 - 2311777
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 323  Q
    ||||||||||| || |||||||||  ||||||||| |  ||| ||||||||||||||||| |||||    
T  2311842 tttgaagaagccaaattagcccactcaaattgacaccgaagaaaatcgaacctgagacctcgagga 2311777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 369
Target Start/End: Complemental strand, 9776403 - 9776313
Alignment:
Q  277 cccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaa 369  Q
    ||||||||||||  ||||  |||||||||||||||||| || || || || ||||   ||||||||| ||| |||||||||||| ||||||||    
T  9776403 cccacctaaattagcatcagagataatcgaacctgagatcttgaagatgagcacat--ccaaatcccaagtcaataccactaggtcaacccaa 9776313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 378
Target Start/End: Original strand, 12994377 - 12994454
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 378  Q
    |||||||| ||||||||  |||| || ||||||||||  |||| ||| ||||||||||| ||||| |||| |||||||    
T  12994377 aatcgaacttgagaccttaaggaggagcacactcccaggtcccaagtcaataccactagaccaactcaagcgggttat 12994454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 378
Target Start/End: Complemental strand, 32687556 - 32687479
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 378  Q
    ||||||||||||||||| ||||| || ||||||| ||| |||| |  ||||||||| ||  |||||||||||| ||||    
T  32687556 aatcgaacctgagacctcgaggaggaacacactctcaagtcccaaactaataccacaagaacaacccaagtggattat 32687479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 375
Target Start/End: Original strand, 37755929 - 37756046
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||||  |||||| ||||  ||  | |||||| |||||||| ||| | || |||| |||||  |||| ||  ||||||||     
T  37755929 tttgaagaagctaaattagcccactcaaattggcatcagagggagtcgaacttgagacctcgagtaggagcacattcccaggtcccaagccaataccacc 37756028  T
Q  358 aggccaacccaagtgggt 375  Q
    | ||||||||||||||||    
T  37756029 aagccaacccaagtgggt 37756046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 315
Target Start/End: Complemental strand, 37972013 - 37971956
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagac 315  Q
    |||| ||||||||| ||||||||||||||||| || |  ||| |||||||||||||||    
T  37972013 tttgtagaagctaaattagcccacctaaattggcaccggagagaatcgaacctgagac 37971956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 335
Target Start/End: Original strand, 41908596 - 41908673
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcc 335  Q
    ||||||||||||||  ||||||||| |||||| || |   ||||||||||| |||||||| ||||| || ||||||||    
T  41908596 tttgaagaagctaaactagcccacccaaattggcaccggggataatcgaacttgagaccttgaggaggagcacactcc 41908673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 378
Target Start/End: Original strand, 16381704 - 16381732
Alignment:
Q  350 ataccactaggccaacccaagtgggttat 378  Q
    |||||||||||||||||||||||||||||    
T  16381704 ataccactaggccaacccaagtgggttat 16381732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 376
Target Start/End: Original strand, 33569859 - 33569935
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaa-taccactaggccaacccaagtgggtt 376  Q
    ||||||||||||||||| |||||||| |||||| |||| |||  ||  || |||||||| ||||||||| |||||||    
T  33569859 aatcgaacctgagacctcgaggaagagcacacttccaagtcctaagccaattaccactaagccaacccatgtgggtt 33569935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 261 - 376
Target Start/End: Complemental strand, 24168 - 24053
Alignment:
Q  261 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 360  Q
    ||||||| ||| |||||||||  |||||| ||||  |||||||||||||||| || | || || || |||||||| || |||| ||| ||||||| ||||    
T  24168 gaagaagttaaattagcccactcaaattggcatcagagataatcgaacctgacacttcgaagaggagcacactcctaagtcccaagtcaataccattagg 24069  T
Q  361 ccaacccaagtgggtt 376  Q
    ||||||||||||||||    
T  24068 ccaacccaagtgggtt 24053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 262 - 376
Target Start/End: Complemental strand, 112396 - 112282
Alignment:
Q  262 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 361  Q
    |||||||||| |||| |||||||||||| || |  ||| |||||||||| ||||||  | || ||||||||||||| || || ||  ||||| || ||||    
T  112396 aagaagctaaattagtccacctaaattggcaccggagagaatcgaacctcagacctcaaagaggaccacactcccagattccaagccaatacaaccaggc 112297  T
Q  362 caacccaagtgggtt 376  Q
    |||||||||||||||    
T  112296 caacccaagtgggtt 112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 372
Target Start/End: Original strand, 13021 - 13118
Alignment:
Q  275 agcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtg 372  Q
    |||||||| |||||||||||  ||| ||||||||||||||||| ||||| || |||||||||| ||| | ||  |||||||| | ||||||| |||||    
T  13021 agcccacccaaattgacatcggagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaataccaccaagccaaccgaagtg 13118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 369
Target Start/End: Original strand, 6880 - 6988
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| |||||||||  ||||||||| |  ||   |||||||||||||| | ||||| || ||||||||| | |||| ||  |||||||||    
T  6880 tttgaagaagctaaattagcccactcaaattgacaccagag---atcgaacctgagactttgaggaggagcacactccccagtcccaagccaataccact 6976  T
Q  358 aggccaacccaa 369  Q
    ||||||||||||    
T  6977 aggccaacccaa 6988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 373
Target Start/End: Original strand, 94968 - 95044
Alignment:
Q  297 agataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgg 373  Q
    ||||||| ||||||||||||| ||||| || ||||||||||  | || ||  |||||||||||||||||||||||||    
T  94968 agataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 376
Target Start/End: Original strand, 42479 - 42596
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    |||||||||||||| ||| ||| | ||||||| || |  ||| |||||||||||||||   ||||| || || ||||||| || || ||| |||||||||    
T  42479 tttgaagaagctaaattaaccc-cttaaattggcaccaaagagaatcgaacctgagactctgaggaggagcatactcccagattccaagtcaataccact 42577  T
Q  358 aggccaacccaagtgggtt 376  Q
    |||||||||||| ||||||    
T  42578 aggccaacccaactgggtt 42596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 11603 - 11534
Alignment:
Q  301 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaag 370  Q
    ||||||||||||||||| ||||| || |||||||||| ||||| ||  |||||||| |||||| ||||||    
T  11603 aatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaataccaccaggccatcccaag 11534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 42622 - 42687
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 323  Q
    |||||||||| ||| |||||||||||||||||||| | |||| |||||||| ||||| || |||||    
T  42622 tttgaagaagttaaattagcccacctaaattgacaccatagagaatcgaacttgagatcttgagga 42687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 343
Target Start/End: Original strand, 8639 - 8685
Alignment:
Q  297 agataatcgaacctgagacctagaggaagaccacactcccaaatccc 343  Q
    |||||||||||||| ||||||  |||| |||||||||||||||||||    
T  8639 agataatcgaacctcagacctcaaggaggaccacactcccaaatccc 8685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 359
Target Start/End: Original strand, 25305 - 25406
Alignment:
Q  258 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 357  Q
    ||||||||||||||  |||| ||   ||||||||| |  ||||||||||||||||||||| ||| | || ||||||||||| || | ||  |||||||||    
T  25305 tttgaagaagctaaaatagctcattcaaattgacaccagagataatcgaacctgagaccttgagaaggagcacactcccaagtctcaagccaataccact 25404  T
Q  358 ag 359  Q
    ||    
T  25405 ag 25406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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