View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14247_high_11 (Length: 294)
Name: NF14247_high_11
Description: NF14247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14247_high_11 |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 16 - 277
Target Start/End: Complemental strand, 35878461 - 35878200
Alignment:
| Q |
16 |
aggggcatgcaatatggtatttaattcacacaaagagtcacatgtaaaaacaaaagaagcatgagggataaaaatacacctcaaaataacattgaaatac |
115 |
Q |
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| T |
35878461 |
aggggcatgcaatatggtatttaattcacacaaagagtcacatgtaaaaacaaaagaagcatgagggataaaaatacagctcaaaattacattgaaatac |
35878362 |
T |
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| Q |
116 |
acattaaaactaaaagtccaatcttatgagctaattgcgattgattttgatattgatgttgatataacattaaaagtaaaataaaaatacatgacatcaa |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35878361 |
acattaaaactaaaagtccaatcttatgagctaattgcgattgattttgatattgatgttgatataacattaaaagtaaaataaaaatacatgacatcaa |
35878262 |
T |
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| Q |
216 |
agtttgnnnnnnnatttcaattttcatcagtttataaaagaatagagataattaataaatct |
277 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35878261 |
agtttgtttttttatttcaattttcatcagtttataaaagaatagagataattaataaatct |
35878200 |
T |
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