View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14247_high_6 (Length: 406)

Name: NF14247_high_6
Description: NF14247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14247_high_6
NF14247_high_6
[»] chr1 (46 HSPs)
chr1 (52-398)||(7898179-7898524)
chr1 (90-394)||(7883440-7883740)
chr1 (1-51)||(45290489-45290539)
chr1 (3-50)||(18473306-18473353)
chr1 (3-50)||(32728968-32729015)
chr1 (3-50)||(45290739-45290786)
chr1 (3-50)||(990298-990345)
chr1 (3-50)||(19622937-19622983)
chr1 (3-50)||(31258621-31258668)
chr1 (1-50)||(18302085-18302133)
chr1 (1-50)||(21391128-21391177)
chr1 (1-50)||(48609268-48609316)
chr1 (3-50)||(990122-990170)
chr1 (1-50)||(19622687-19622737)
chr1 (1-50)||(14007521-14007568)
chr1 (1-50)||(41358582-41358631)
chr1 (3-50)||(7001815-7001863)
chr1 (3-50)||(18473513-18473561)
chr1 (3-50)||(26061990-26062038)
chr1 (3-50)||(31258373-31258421)
chr1 (3-47)||(45368524-45368568)
chr1 (1-45)||(46868502-46868545)
chr1 (3-50)||(3679906-3679952)
chr1 (3-50)||(18900053-18900099)
chr1 (3-50)||(37545662-37545708)
chr1 (3-50)||(44641353-44641398)
chr1 (10-48)||(2733226-2733263)
chr1 (3-49)||(3753493-3753538)
chr1 (1-47)||(6567420-6567464)
chr1 (3-49)||(11822038-11822083)
chr1 (3-49)||(13770523-13770569)
chr1 (3-49)||(22919718-22919762)
chr1 (1-47)||(27521608-27521653)
chr1 (1-35)||(41881125-41881159)
chr1 (3-49)||(44641112-44641157)
chr1 (1-50)||(18899871-18899918)
chr1 (4-49)||(26191394-26191438)
chr1 (1-50)||(32453962-32454009)
chr1 (3-50)||(2939963-2940007)
chr1 (3-50)||(3753247-3753291)
chr1 (1-49)||(20756051-20756099)
chr1 (1-49)||(22953476-22953524)
chr1 (3-50)||(29072531-29072579)
chr1 (10-50)||(32626812-32626852)
chr1 (10-50)||(37545869-37545908)
chr1 (3-47)||(50429131-50429175)
[»] scaffold0370 (1 HSPs)
scaffold0370 (1-50)||(208-257)
[»] chr4 (47 HSPs)
chr4 (1-50)||(9289558-9289607)
chr4 (1-50)||(50714484-50714533)
chr4 (7-50)||(50714278-50714321)
chr4 (1-50)||(9289298-9289348)
chr4 (3-52)||(8760698-8760747)
chr4 (3-50)||(6827792-6827840)
chr4 (3-50)||(41345887-41345935)
chr4 (3-50)||(23778998-23779045)
chr4 (3-50)||(32208576-32208622)
chr4 (4-50)||(35415334-35415381)
chr4 (3-50)||(38054580-38054626)
chr4 (4-50)||(41620174-41620221)
chr4 (3-50)||(51545889-51545935)
chr4 (7-50)||(51708946-51708989)
chr4 (3-49)||(27008327-27008372)
chr4 (4-50)||(43368500-43368545)
chr4 (1-50)||(8760636-8760683)
chr4 (1-50)||(9446243-9446291)
chr4 (1-50)||(13479531-13479579)
chr4 (1-50)||(18831098-18831146)
chr4 (1-50)||(45593506-45593554)
chr4 (1-50)||(52442013-52442060)
chr4 (7-50)||(123572-123616)
chr4 (2-50)||(4279055-4279103)
chr4 (3-50)||(6827580-6827628)
chr4 (3-47)||(11285537-11285581)
chr4 (3-50)||(41619933-41619981)
chr4 (3-50)||(5882585-5882630)
chr4 (3-50)||(9445983-9446028)
chr4 (3-50)||(18205190-18205236)
chr4 (3-50)||(29463832-29463879)
chr4 (3-50)||(32365128-32365175)
chr4 (3-50)||(32365403-32365449)
chr4 (3-50)||(51545663-51545709)
chr4 (4-50)||(28809046-28809091)
chr4 (3-45)||(34354999-34355041)
chr4 (4-50)||(41921003-41921049)
chr4 (3-48)||(16712614-16712657)
chr4 (1-50)||(34361835-34361883)
chr4 (3-36)||(35763681-35763714)
chr4 (1-50)||(41346137-41346186)
chr4 (1-50)||(52430021-52430068)
chr4 (6-50)||(3653659-3653703)
chr4 (10-50)||(18830887-18830926)
chr4 (3-50)||(35415551-35415599)
chr4 (3-50)||(51708727-51708777)
chr4 (3-47)||(55482392-55482434)
[»] chr7 (26 HSPs)
chr7 (3-50)||(1006869-1006916)
chr7 (3-45)||(44508978-44509020)
chr7 (3-50)||(6108368-6108416)
chr7 (3-50)||(1007148-1007195)
chr7 (3-50)||(6509390-6509436)
chr7 (3-50)||(44508754-44508800)
chr7 (3-50)||(45073561-45073607)
chr7 (4-49)||(14738925-14738969)
chr7 (1-50)||(39832938-39832985)
chr7 (1-50)||(44344710-44344757)
chr7 (1-49)||(25547411-25547458)
chr7 (2-50)||(31310398-31310446)
chr7 (3-50)||(5308606-5308653)
chr7 (3-50)||(12894075-12894121)
chr7 (3-50)||(28911827-28911872)
chr7 (3-50)||(30709359-30709405)
chr7 (3-50)||(37372824-37372870)
chr7 (1-48)||(44403171-44403217)
chr7 (1-50)||(18022399-18022447)
chr7 (1-50)||(19783847-19783896)
chr7 (1-50)||(23816954-23817002)
chr7 (1-50)||(37372469-37372518)
chr7 (3-50)||(7431985-7432033)
chr7 (1-49)||(13769806-13769852)
chr7 (3-50)||(17999643-17999687)
chr7 (6-50)||(21554672-21554716)
[»] chr6 (37 HSPs)
chr6 (3-50)||(7155831-7155878)
chr6 (3-50)||(15076123-15076170)
chr6 (3-50)||(32885707-32885754)
chr6 (3-50)||(33801662-33801709)
chr6 (3-51)||(543395-543443)
chr6 (6-50)||(8681035-8681079)
chr6 (3-50)||(777711-777758)
chr6 (3-50)||(1890371-1890418)
chr6 (7-50)||(5286870-5286913)
chr6 (3-50)||(31166904-31166951)
chr6 (1-50)||(30928713-30928761)
chr6 (3-50)||(7156078-7156126)
chr6 (3-50)||(8680809-8680857)
chr6 (1-49)||(23770193-23770240)
chr6 (3-50)||(5286620-5286667)
chr6 (3-50)||(14428684-14428730)
chr6 (4-50)||(14655414-14655461)
chr6 (4-50)||(318017-318062)
chr6 (3-49)||(15962309-15962355)
chr6 (3-45)||(24274055-24274097)
chr6 (4-50)||(34990234-34990280)
chr6 (1-50)||(11448569-11448618)
chr6 (3-50)||(1890093-1890141)
chr6 (6-50)||(2616154-2616197)
chr6 (6-50)||(6468347-6468391)
chr6 (6-50)||(6591158-6591202)
chr6 (3-50)||(12419856-12419904)
chr6 (3-50)||(22822569-22822617)
chr6 (3-47)||(33131773-33131816)
chr6 (3-50)||(33808654-33808702)
chr6 (7-50)||(19275958-19276001)
chr6 (3-50)||(21995098-21995145)
chr6 (3-50)||(31167120-31167166)
chr6 (1-50)||(6591360-6591410)
chr6 (4-50)||(10091071-10091115)
chr6 (3-49)||(30928965-30929010)
chr6 (1-50)||(26375725-26375773)
[»] chr5 (39 HSPs)
chr5 (3-50)||(15635626-15635673)
chr5 (3-50)||(18633633-18633680)
chr5 (3-50)||(29875434-29875481)
chr5 (4-50)||(38496701-38496747)
chr5 (1-50)||(21124945-21124994)
chr5 (1-50)||(35166078-35166126)
chr5 (1-50)||(42207274-42207322)
chr5 (3-50)||(7075606-7075652)
chr5 (4-50)||(25561740-25561787)
chr5 (3-50)||(29151770-29151817)
chr5 (3-49)||(29172557-29172604)
chr5 (3-50)||(29172805-29172852)
chr5 (3-49)||(28550861-28550906)
chr5 (4-50)||(38786194-38786239)
chr5 (1-50)||(4203690-4203738)
chr5 (1-50)||(10743974-10744022)
chr5 (1-50)||(15635408-15635457)
chr5 (1-50)||(40167927-40167976)
chr5 (3-50)||(6118166-6118214)
chr5 (3-50)||(18633879-18633927)
chr5 (3-50)||(2217774-2217820)
chr5 (3-50)||(9179840-9179886)
chr5 (3-50)||(16038411-16038458)
chr5 (3-50)||(34125341-34125387)
chr5 (3-50)||(40029418-40029463)
chr5 (4-50)||(9179628-9179674)
chr5 (4-50)||(21050610-21050655)
chr5 (1-50)||(24782021-24782071)
chr5 (3-48)||(29875645-29875691)
chr5 (3-49)||(35167085-35167131)
chr5 (3-49)||(36578004-36578049)
chr5 (3-47)||(29151550-29151595)
chr5 (1-46)||(36577754-36577797)
chr5 (3-50)||(2217528-2217576)
chr5 (1-49)||(14318077-14318123)
chr5 (1-49)||(26133333-26133381)
chr5 (3-50)||(30800528-30800572)
chr5 (7-50)||(38496457-38496501)
chr5 (3-35)||(39379273-39379305)
[»] chr3 (47 HSPs)
chr3 (3-50)||(28427527-28427574)
chr3 (3-50)||(37506901-37506948)
chr3 (4-50)||(51834861-51834907)
chr3 (3-48)||(28942826-28942871)
chr3 (1-50)||(34238630-34238679)
chr3 (1-50)||(39436750-39436799)
chr3 (3-50)||(3151784-3151831)
chr3 (3-50)||(3152030-3152077)
chr3 (3-50)||(10977012-10977059)
chr3 (4-50)||(20611055-20611101)
chr3 (1-47)||(39288605-39288651)
chr3 (4-51)||(8510446-8510494)
chr3 (3-50)||(22156211-22156259)
chr3 (3-50)||(26799922-26799970)
chr3 (3-50)||(39437027-39437075)
chr3 (3-50)||(10778651-10778697)
chr3 (1-47)||(28427277-28427324)
chr3 (3-50)||(37507142-37507188)
chr3 (3-50)||(39288818-39288864)
chr3 (4-47)||(49670725-49670767)
chr3 (3-50)||(51834642-51834689)
chr3 (3-49)||(20612819-20612864)
chr3 (1-50)||(22155961-22156011)
chr3 (1-50)||(40169376-40169426)
chr3 (1-50)||(4513540-4513588)
chr3 (6-50)||(13584285-13584330)
chr3 (3-48)||(25710791-25710836)
chr3 (1-50)||(30130190-30130238)
chr3 (1-50)||(31869876-31869924)
chr3 (1-50)||(45161145-45161193)
chr3 (7-50)||(8510252-8510296)
chr3 (3-50)||(10977259-10977307)
chr3 (1-50)||(14633806-14633857)
chr3 (3-51)||(40979629-40979676)
chr3 (6-50)||(49670511-49670554)
chr3 (3-50)||(4513297-4513342)
chr3 (3-50)||(20757434-20757480)
chr3 (3-50)||(51500605-51500651)
chr3 (3-49)||(4950071-4950116)
chr3 (3-49)||(9863324-9863370)
chr3 (1-50)||(40169572-40169622)
chr3 (1-50)||(51759851-51759901)
chr3 (6-50)||(3361736-3361781)
chr3 (1-50)||(4814820-4814867)
chr3 (1-50)||(31869626-31869675)
chr3 (3-50)||(14633579-14633627)
chr3 (10-50)||(45320661-45320701)
[»] chr2 (33 HSPs)
chr2 (3-50)||(17541416-17541463)
chr2 (3-50)||(19184070-19184117)
chr2 (1-48)||(26813898-26813945)
chr2 (3-50)||(37272021-37272068)
chr2 (3-50)||(38980172-38980219)
chr2 (1-50)||(5790818-5790867)
chr2 (1-50)||(17541695-17541744)
chr2 (1-50)||(17912481-17912530)
chr2 (3-49)||(7814280-7814325)
chr2 (1-50)||(38639444-38639492)
chr2 (3-50)||(17912730-17912777)
chr2 (3-49)||(37271773-37271820)
chr2 (4-50)||(43789110-43789157)
chr2 (2-47)||(38979923-38979969)
chr2 (4-50)||(41693709-41693755)
chr2 (1-50)||(22881889-22881936)
chr2 (1-50)||(43597420-43597467)
chr2 (1-45)||(2265322-2265365)
chr2 (3-50)||(26814147-26814195)
chr2 (3-50)||(43788892-43788940)
chr2 (3-50)||(44073725-44073773)
chr2 (3-50)||(24483434-24483479)
chr2 (3-50)||(38731863-38731908)
chr2 (3-50)||(43710629-43710674)
chr2 (3-49)||(9195127-9195172)
chr2 (1-35)||(19183814-19183848)
chr2 (4-50)||(25954150-25954196)
chr2 (4-50)||(26707908-26707952)
chr2 (3-49)||(32691347-32691392)
chr2 (1-50)||(14393049-14393097)
chr2 (7-48)||(41791056-41791097)
chr2 (1-49)||(10665016-10665063)
chr2 (3-50)||(26708122-26708170)
[»] scaffold0326 (4 HSPs)
scaffold0326 (1-50)||(4073-4122)
scaffold0326 (1-50)||(4207-4256)
scaffold0326 (1-50)||(19255-19304)
scaffold0326 (1-50)||(19389-19438)
[»] chr8 (30 HSPs)
chr8 (3-50)||(1526091-1526138)
chr8 (1-50)||(8094511-8094561)
chr8 (1-50)||(38930334-38930383)
chr8 (1-49)||(14238783-14238831)
chr8 (6-50)||(16643698-16643742)
chr8 (3-50)||(14238999-14239046)
chr8 (4-50)||(29488030-29488075)
chr8 (1-50)||(19494151-19494200)
chr8 (1-49)||(14488995-14489041)
chr8 (3-51)||(16789288-16789335)
chr8 (3-50)||(38930582-38930630)
chr8 (4-50)||(1162944-1162991)
chr8 (3-50)||(6146550-6146596)
chr8 (3-50)||(14495103-14495150)
chr8 (2-49)||(15719689-15719736)
chr8 (2-49)||(29158590-29158636)
chr8 (3-50)||(32418352-32418398)
chr8 (3-50)||(35143764-35143810)
chr8 (3-48)||(1685148-1685194)
chr8 (3-45)||(21125945-21125987)
chr8 (3-50)||(22917598-22917647)
chr8 (3-49)||(24954931-24954976)
chr8 (4-50)||(40844191-40844235)
chr8 (5-50)||(1163193-1163238)
chr8 (3-47)||(8094762-8094807)
chr8 (3-50)||(1525843-1525891)
chr8 (3-50)||(16643962-16644010)
chr8 (1-49)||(18549495-18549541)
chr8 (10-49)||(22917847-22917887)
chr8 (3-50)||(43477197-43477245)
[»] scaffold0811 (2 HSPs)
scaffold0811 (1-50)||(1343-1393)
scaffold0811 (3-50)||(1562-1610)
[»] scaffold0373 (1 HSPs)
scaffold0373 (3-50)||(8581-8629)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-50)||(12557-12606)
[»] scaffold0210 (2 HSPs)
scaffold0210 (1-50)||(14932-14980)
scaffold0210 (3-43)||(14731-14771)
[»] scaffold0051 (2 HSPs)
scaffold0051 (1-50)||(5625-5676)
scaffold0051 (6-48)||(5436-5478)
[»] scaffold1001 (1 HSPs)
scaffold1001 (3-50)||(2812-2857)
[»] scaffold0179 (1 HSPs)
scaffold0179 (1-47)||(3214-3259)
[»] scaffold0166 (1 HSPs)
scaffold0166 (1-50)||(24404-24454)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-50)||(3564-3611)
[»] scaffold0003 (1 HSPs)
scaffold0003 (3-50)||(366195-366239)


Alignment Details
Target: chr1 (Bit Score: 296; Significance: 1e-166; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 52 - 398
Target Start/End: Complemental strand, 7898524 - 7898179
Alignment:
Q  52 atctcaattgtcaatttgaaattaaacaacttaaatttgttacagcgtccttcatagataaatcatgttttaagggcggatttcttgcttgttttgcttc 151  Q
    |||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||    
T  7898524 atctcaatcgtcaatttgaaattaagcgacttaaatttgttacagcgtccttcatagataaatcatgttttaaggg---atttcttgcttgttttacttc 7898428  T
Q  152 acaacattcattgcaaacttgtttaggtactttgatatggggaagtccatttaccataccgttt--gcattcattatgcacaagcttctaaagtttagat 249  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||    
T  7898427 acaacattcatcgcaaacttgtttaggtactttgatatggggaagtccatttaccataccttttttgcattcattatgcacaagcttctaaagtttagat 7898328  T
Q  250 gcccgtatttgtgatgccatgtccagttttcactcaaaactgtagctgctaaacaatgatgattcaatacttcaatttctattttgaaggttctatttat 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7898327 gcccgtatttgtgatgccatgtccagttttcactcaaaactgtagctgctaaacaatgatgattcaatacttcaatttctattttgaaggttctatttat 7898228  T
Q  350 ggatagaggttccttcaagatcaatctttcactttcatcaatgaccttt 398  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7898227 ggatagaggtgccttcaagatcaatctttcactttcatcaatgaccttt 7898179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 90 - 394
Target Start/End: Complemental strand, 7883740 - 7883440
Alignment:
Q  90 gttacagcgtccttcatagataaatcatgttttaagggcggatttcttgcttgttttgcttcacaacattcattgcaaacttgtttaggtactttgatat 189  Q
    |||||||||||||||||| |||||||||||||| ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7883740 gttacagcgtccttcatatataaatcatgttttgaggg---atttcttgcttgttttgcttcacaacattcattgcaaacttgtttaggtactttgatat 7883644  T
Q  190 ggggaagtccatttaccataccgtttgcattcattatgcacaagcttctaaagtttagatgcccgtatttgtgatgccatgtccagttttcactcaaaac 289  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7883643 ggggaagttcatttaccataccgtttgcattcattatgcacaagcttctaaagtttagatgcccgtatttgtgatgccatgtccagttttcactcaaaac 7883544  T
Q  290 tgtagctgctaaacaatgatgattcaatacttcaatttctattttgaaggttctatttatggatagaggttccttcaagatcaatctttcactttcatca 389  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7883543 tgtagctgctaaacaatgatga-tcaatacttcaatttctattttgaaggttctatttatggatagaggtgccttcaagatcaatctttcactttcatca 7883445  T
Q  390 atgac 394  Q
    |||||    
T  7883444 atgac 7883440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 45290489 - 45290539
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccca 51  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  45290489 gtctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtccca 45290539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 18473306 - 18473353
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18473306 ctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 18473353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 32729015 - 32728968
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32729015 ctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 32728968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 45290786 - 45290739
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45290786 ctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 45290739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 990345 - 990298
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  990345 ctcgttttggttttagtccctggtaaaaaaaaatttgtttttggtccc 990298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 19622983 - 19622937
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19622983 ctcgttttggttttagtccctggtaaa-aaaaaattgtttttggtccc 19622937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 31258668 - 31258621
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||    
T  31258668 ctcgtttttgttttagtccctggtaaaaaaaaaattgtttttggtccc 31258621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18302085 - 18302133
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  18302085 gtctcgttttggttttagtccct-gtaaaaaaaaaattgtttttggtccc 18302133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21391128 - 21391177
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||||    
T  21391128 gtctcgttttggttttagtccctgtgaaaaaaaaaattgtttttggtccc 21391177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 48609268 - 48609316
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  48609268 gtctcgttttggttttagtccct-gtaaaaaaaaaattgtttttggtccc 48609316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 990122 - 990170
Alignment:
Q  3 ctcgttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  990122 ctcgttttggttttagtccctggtaaaaaaaaaaattgtttttggtccc 990170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19622687 - 19622737
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtccc 50  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||||||    
T  19622687 gtctcgttttggttttagtcccttgtaaaaaaaaaatttgtttttggtccc 19622737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 14007521 - 14007568
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  14007521 gtctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtccc 14007568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41358631 - 41358582
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||| ||||||||| ||| | ||||||||||||||    
T  41358631 gtctcgttttggttttagttcctggtaaaaaaatatttgtttttggtccc 41358582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 7001863 - 7001815
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaa-aaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||| || ||||||||||||||    
T  7001863 ctcgttttggttttagtccctggtaaaaaaataatttgtttttggtccc 7001815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 18473561 - 18473513
Alignment:
Q  3 ctcgttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| || ||| ||||||||||||||||||||    
T  18473561 ctcgttttggttttagtccctagtaaaaaaaaaaattgtttttggtccc 18473513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 26061990 - 26062038
Alignment:
Q  3 ctcgttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  26061990 ctcgttttggttttagtccctggtaaaaaaaaaaattatttttggtccc 26062038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 31258373 - 31258421
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaa-aaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||| || ||||||||||||||    
T  31258373 ctcgttttggttttagtccctggtaaaaaaataatttgtttttggtccc 31258421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 45368524 - 45368568
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggt 47  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||    
T  45368524 ctcgttttggttttagtccctgtaaaaaaaaaaattgtttttggt 45368568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 46868545 - 46868502
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttg 45  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||    
T  46868545 gtctcgttttggttttagtccctgg-aaaaaaaaaattgtttttg 46868502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 3679952 - 3679906
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||| |||||||||||| |||| ||||||||||||||||||||    
T  3679952 ctcgttttgattttagtccctgttaaa-aaaaaattgtttttggtccc 3679906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 18900099 - 18900053
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  18900099 ctcgttttggttttagtccct-gtaataaaaaaattgtttttggtccc 18900053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 37545662 - 37545708
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  37545662 ctcgttttggttttagtccct-gcaaaaaaaaaattgtttttggtccc 37545708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 44641398 - 44641353
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  44641398 ctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtccc 44641353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 2733226 - 2733263
Alignment:
Q  10 tggttttagtccctggtaaataaaaaattgtttttggtc 48  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  2733226 tggttttagtccctggtaaa-aaaaaattgtttttggtc 2733263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 3753538 - 3753493
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||||| || || |||||||||||||||||||    
T  3753538 ctcgttttggttttagtccct-gtgaaaaaaaaattgtttttggtcc 3753493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6567464 - 6567420
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggt 47  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||    
T  6567464 gtctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggt 6567420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 11822038 - 11822083
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||| || |||| |||||||||||||||||||    
T  11822038 ctcgttttggttttagtccttg-taaaaaaaaaattgtttttggtcc 11822083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 13770523 - 13770569
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||||||  ||| ||||| |||||||||||||    
T  13770523 ctcgttttggttttagtccctgtaaaaaaaaaatttgtttttggtcc 13770569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 22919718 - 22919762
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||    
T  22919718 ctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtcc 22919762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27521608 - 27521653
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggt 47  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||||||    
T  27521608 gtctcgttttgattttagtccct-gtaaaaaaaaaattgtttttggt 27521653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 41881125 - 41881159
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaa 35  Q
    ||||||||||||||||||||||||||||| |||||    
T  41881125 gtctcgttttggttttagtccctggtaaaaaaaaa 41881159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 44641112 - 44641157
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    |||||||||||||||||||||  |||| |||||||||||||||||||    
T  44641112 ctcgttttggttttagtccct-ataaaaaaaaaattgtttttggtcc 44641157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18899871 - 18899918
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||||||||||    
T  18899871 gtctcgttttggttttagttcct-gtaaa-aaaaaattgtttttggtccc 18899918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 26191394 - 26191438
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    |||||||||||||||||| || |||| |||||||||||||||||||    
T  26191394 tcgttttggttttagtccttg-taaaaaaaaaattgtttttggtcc 26191438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 32453962 - 32454009
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||| ||||    
T  32453962 gtctcgttttggttttagtccct-gtaaa-aaaaaattgtttttgatccc 32454009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 2939963 - 2940007
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  2939963 ctcgttttggttttagtccct-gtaa--aaaaaattgtttttggtccc 2940007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 3753247 - 3753291
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  3753247 ctcgttttggttttagtccct-gtaa--aaaaaattgtttttggtccc 3753291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20756051 - 20756099
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||||| ||  ||| ||||| |||||||||||||    
T  20756051 gtctcgttttggttttagtccttgtaaaaaaaaaatttgtttttggtcc 20756099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22953524 - 22953476
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||  ||||  ||| |||||||||||||||||||    
T  22953524 gtctcgttttggttttagatcctgtgaaaaaaaaaattgtttttggtcc 22953476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 29072531 - 29072579
Alignment:
Q  3 ctcgttttggttttagtccctg-gtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||   ||| ||||||||||||||||||||    
T  29072531 ctcgttttggttttagtccctgtaaaaaaaaaaaattgtttttggtccc 29072579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 32626852 - 32626812
Alignment:
Q  10 tggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||  ||| ||||||||||||||||||||    
T  32626852 tggttttagtccctgtaaaaaaaaaaattgtttttggtccc 32626812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 37545908 - 37545869
Alignment:
Q  10 tggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  37545908 tggttttagtccctg-taaaaaaaaaattgtttttggtccc 37545869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 50429175 - 50429131
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggt 47  Q
    ||||||||||||||||||||||  ||| ||||| |||||||||||    
T  50429175 ctcgttttggttttagtccctgtaaaaaaaaaatttgtttttggt 50429131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 257 - 208
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  257 gtctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9289607 - 9289558
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9289607 gtctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 9289558  T

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Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 50714533 - 50714484
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  50714533 gtctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 50714484  T

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Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 50714278 - 50714321
Alignment:
Q  7 ttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  50714278 ttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 50714321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9289298 - 9289348
Alignment:
Q  1 gtctcgttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  9289298 gtctcgttttggttttagtccctggtaaaaaaaaaaattgtttttggtccc 9289348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 8760747 - 8760698
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtcccaa 52  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  8760747 ctcgttttggttttagtccctgtaaaaaaaaaaattgtttttggtcccaa 8760698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 6827840 - 6827792
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  6827840 ctcgttttggttttagtccctggtaaaaaaaaaatttgtttttggtccc 6827792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 41345887 - 41345935
Alignment:
Q  3 ctcgttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  41345887 ctcgttttggttttagtccctggtaaaaaaaaaaattgtttttggtccc 41345935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 23778998 - 23779045
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||    
T  23778998 ctcgttttggttttagttcttggtaaaaaaaaaattgtttttggtccc 23779045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 32208576 - 32208622
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  32208576 ctcgttttggttttagtccctagtaaa-aaaaaattgtttttggtccc 32208622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 35415334 - 35415381
Alignment:
Q  4 tcgttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  35415334 tcgttttggttttagtccctggtaaaaaaaaaaattgtttttggtccc 35415381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 38054580 - 38054626
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  38054580 ctcgttttggttttagtccct-gtaaaaaaaaaattgtttttggtccc 38054626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 41620221 - 41620174
Alignment:
Q  4 tcgttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  41620221 tcgttttggttttagtccctggtaaaaaaaaaaattgtttttggtccc 41620174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 51545935 - 51545889
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||    
T  51545935 ctcgttttggttttagtccctg-taaaaaaaaaattgtttttggtccc 51545889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 51708989 - 51708946
Alignment:
Q  7 ttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||| |||||||| ||||||||||||||||||||    
T  51708989 ttttggttttagtctctggtaaaaaaaaaattgtttttggtccc 51708946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 27008372 - 27008327
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||    
T  27008372 ctcgttttggttttagtccct-gtaaaaaaaaaattgtttttggtcc 27008327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 43368500 - 43368545
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  43368500 tcgttttggttttagtccctg-taaaaaaaaaattgtttttggtccc 43368545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 8760636 - 8760683
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  8760636 gtctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtccc 8760683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9446291 - 9446243
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||| ||||||| |||| ||||||||||||||||||||    
T  9446291 gtctcgttttggttttcgtccctg-taaaaaaaaaattgtttttggtccc 9446243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13479579 - 13479531
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  13479579 gtctcgttttggttttagtccct-gtaaaaaaaaatttgtttttggtccc 13479531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 18831146 - 18831098
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||| ||||||||||||||||||| |||| ||||||||||||||||||||    
T  18831146 gtcttgttttggttttagtccctg-taaaaaaaaaattgtttttggtccc 18831098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 45593554 - 45593506
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  45593554 gtctcgttttggttttagttcctg-taaaaaaaaaattgtttttggtccc 45593506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 52442060 - 52442013
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  52442060 gtctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtccc 52442013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 123572 - 123616
Alignment:
Q  7 ttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||    
T  123572 ttttggttttagtccctggtaaaaaaaaaaattgtttttggtccc 123616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 4279055 - 4279103
Alignment:
Q  2 tctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||||   || ||||||||||||||||||||    
T  4279055 tctcgttttggttttagtccctgtataaaaaaaaattgtttttggtccc 4279103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 6827580 - 6827628
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtccc 50  Q
    |||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  6827580 ctcgttttggttttagtcgctggtaaaaaaaaaatttgtttttggtccc 6827628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 11285537 - 11285581
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggt 47  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||    
T  11285537 ctcgttttggttttagtccctgtaaaaaaaaaaattgtttttggt 11285581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 41619933 - 41619981
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaa-attgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  41619933 ctcgttttggttttagtccctggtaaaaaaaaattttgtttttggtccc 41619981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 5882585 - 5882630
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  5882585 ctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtccc 5882630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 9445983 - 9446028
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  9445983 ctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtccc 9446028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 18205190 - 18205236
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||||    
T  18205190 ctcgttttggttttagtccct-ataaaaaaaaaattgtttttggtccc 18205236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 29463879 - 29463832
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||| |||||||  ||| ||||||||||||||||||||    
T  29463879 ctcgttttggttttggtccctgtaaaaaaaaaaattgtttttggtccc 29463832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 32365128 - 32365175
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||| ||||  ||| ||||||||||||||||||||    
T  32365128 ctcgttttggttttagttcctgtgaaaaaaaaaattgtttttggtccc 32365175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 32365449 - 32365403
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| || || ||||||||||||||||||||    
T  32365449 ctcgttttggttttagtccct-gtgaaaaaaaaattgtttttggtccc 32365403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 51545663 - 51545709
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  51545663 ctcgttttggttttagtctctg-taaaaaaaaaattgtttttggtccc 51545709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 28809046 - 28809091
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||| ||||| ||||||||||||||| ||||    
T  28809046 tcgttttggttttagtccct-gtaaaaaaaaaattgtttttgatccc 28809091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 34354999 - 34355041
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttg 45  Q
    ||||||||||||||||||||||  ||| |||||||||||||||    
T  34354999 ctcgttttggttttagtccctgtaaaaaaaaaaattgtttttg 34355041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 41921049 - 41921003
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||  |||||| ||||| ||||||||||||||    
T  41921049 tcgttttggttttagtcctaggtaaaaaaaaatttgtttttggtccc 41921003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 16712657 - 16712614
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtc 48  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  16712657 ctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtc 16712614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34361835 - 34361883
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||||| ||||    
T  34361835 gtctcgttttggttttagt-ccttgtaaaaaaaaaattgtttttgatccc 34361883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 35763681 - 35763714
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaa 36  Q
    ||||||||||||||||||||||||||| ||||||    
T  35763681 ctcgttttggttttagtccctggtaaaaaaaaaa 35763714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41346186 - 41346137
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||| ||||||||||||||| ||||||| |||||||  |||||||||||    
T  41346186 gtctcattttggttttagtccttggtaaaaaaaaaatcatttttggtccc 41346137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 52430068 - 52430021
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||||    
T  52430068 gtctcgttttagttttagtccctg-taaa-aaaaaattgtttttggtccc 52430021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 3653703 - 3653659
Alignment:
Q  6 gttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||| | |||||| |||||||||||||| |||||    
T  3653703 gttttggttttagtctccggtaaaaaaaaaattgtttttagtccc 3653659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 18830887 - 18830926
Alignment:
Q  10 tggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  18830887 tggttttagtccctg-taaaaaaaaaattgtttttggtccc 18830926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 35415599 - 35415551
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaa-aattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||   ||||||||||||||    
T  35415599 ctcgttttggttttagtccctggtaaaaaaaatttttgtttttggtccc 35415551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 51708727 - 51708777
Alignment:
Q  3 ctcgttttggttttagtccctggt---aaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||| |||||   ||| ||||||||||||||||||||    
T  51708727 ctcgttttggttttagtctctggtaaaaaaaaaaaaattgtttttggtccc 51708777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 55482434 - 55482392
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggt 47  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||    
T  55482434 ctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggt 55482392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 6e-16; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 1006869 - 1006916
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1006869 ctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 1006916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 44509020 - 44508978
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttg 45  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  44509020 ctcgttttggttttagtccctggtaaaaaaaaaattgtttttg 44508978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 6108368 - 6108416
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  6108368 ctcgttttggttttagtccctggtaaaaaaaaaatttgtttttggtccc 6108416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 1007195 - 1007148
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  1007195 ctcgttttgattttagtccttggtaaaaaaaaaattgtttttggtccc 1007148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 6509436 - 6509390
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||    
T  6509436 ctcgttttggttttagtccctg-taaaaaaaaaattgtttttggtccc 6509390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 44508754 - 44508800
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  44508754 ctcgttttggttttagtccctggtaaa-aaaaatttgtttttggtccc 44508800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 45073607 - 45073561
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||    
T  45073607 ctcgttttggttttagtccctg-taaaaaaaaaattgtttttggtccc 45073561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 14738969 - 14738925
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||    
T  14738969 tcgttttgattttagtccctggtaaa-aaaaaattgtttttggtcc 14738925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 39832938 - 39832985
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  39832938 gtctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtccc 39832985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 44344757 - 44344710
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  44344757 gtctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtccc 44344710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 25547458 - 25547411
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||||||    
T  25547458 gtctcgttttgattttagtccctg-taaaaaaaaaattgtttttggtcc 25547411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 31310398 - 31310446
Alignment:
Q  2 tctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||| |||  ||| ||||||||||||||||||||    
T  31310398 tctcgttttggttttagtctctgtaaaaaaaaaaattgtttttggtccc 31310446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 5308653 - 5308606
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||  ||| ||||| ||||||||||||||    
T  5308653 ctcgttttggttttagtccctgtaaaaaaaaaatttgtttttggtccc 5308606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 12894075 - 12894121
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||| |||||| |||| ||||||||||||||||||||    
T  12894075 ctcgttttggttttaatccctg-taaaaaaaaaattgtttttggtccc 12894121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 28911872 - 28911827
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  28911872 ctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtccc 28911827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 30709359 - 30709405
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||| || |||| ||||||||||||||||||||    
T  30709359 ctcgttttggttttagtccttg-taaaaaaaaaattgtttttggtccc 30709405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 37372870 - 37372824
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  37372870 ctcgttttggttttagtacctg-taaaaaaaaaattgtttttggtccc 37372824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 44403217 - 44403171
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtc 48  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||    
T  44403217 gtctcgttttggttttagtccct-ataaaaaaaaaattgtttttggtc 44403171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18022399 - 18022447
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||||||||    
T  18022399 gtctcgttttggttttagttccta-taaaaaaaaaattgtttttggtccc 18022447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19783847 - 19783896
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||  ||| ||||| ||||||||||||||    
T  19783847 gtctcgttttggttttagtccttgtaaaaaaaaaatttgtttttggtccc 19783896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23817002 - 23816954
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||| ||||| |||| |||| ||||||||||||||||||||    
T  23817002 gtctcgttttggtattagttcctg-taaaaaaaaaattgtttttggtccc 23816954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 37372469 - 37372518
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||  ||| ||||  ||||||||||||||    
T  37372469 gtctcgttttggttttagtccctgtaaaaaaaaactttgtttttggtccc 37372518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 7431985 - 7432033
Alignment:
Q  3 ctcgttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||  |||| ||| ||||||||||||||||||||    
T  7431985 ctcgttttggttttagtctttggtaaaaaaaaaaattgtttttggtccc 7432033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13769806 - 13769852
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  13769806 gtctcgttttggttttagt-ccttgtaaa-aaaaaattgtttttggtcc 13769852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 17999687 - 17999643
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  17999687 ctcgttttggttttagtccct-gtaa--aaaaaattgtttttggtccc 17999643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 21554716 - 21554672
Alignment:
Q  6 gttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||| ||||||||||||  ||| ||||||||||||||||||||    
T  21554716 gttttgattttagtccctgtaaaaaaaaaaattgtttttggtccc 21554672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 6e-16; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 7155831 - 7155878
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7155831 ctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 7155878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 15076170 - 15076123
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15076170 ctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 15076123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 32885707 - 32885754
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32885707 ctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 32885754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 33801709 - 33801662
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33801709 ctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 33801662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 543395 - 543443
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccca 51  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  543395 ctcgttttggttttagtccctggtaaaaaaaaatttgtttttggtccca 543443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 8681079 - 8681035
Alignment:
Q  6 gttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  8681079 gttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 8681035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 777711 - 777758
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  777711 ctcgttttggttttagtccctggtaaaaaaaaatttgtttttggtccc 777758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 1890418 - 1890371
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  1890418 ctcgttttgattttagtccctggtaaaaaaaaaattgtttttggtccc 1890371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 5286913 - 5286870
Alignment:
Q  7 ttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  5286913 ttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 5286870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 31166904 - 31166951
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||    
T  31166904 ctcgttttggttttagtccctggtaaaaataaaattgtttttggtccc 31166951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 30928713 - 30928761
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  30928713 gtctcgttttggttttagtccct-gtaaaaaaaaaattgtttttggtccc 30928761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 7156126 - 7156078
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  7156126 ctcgttttggttttagtccctggtaaaaaaaaaatttgtttttggtccc 7156078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 8680809 - 8680857
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  8680809 ctcgttttggttttagtccctggtaaaaaaaaaatttgtttttggtccc 8680857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23770193 - 23770240
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  23770193 gtctcgttttggttttagtccct-gtaaaaaaaaaattgtttttggtcc 23770240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 5286620 - 5286667
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  5286620 ctcgttttgattttagtccttggtaaaaaaaaaattgtttttggtccc 5286667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 14428684 - 14428730
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  14428684 ctcgttttggttttagtccct-gtaaaaaaaaaattgtttttggtccc 14428730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 14655414 - 14655461
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtccc 50  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||    
T  14655414 tcgttttggttttagtccctggtaaaaaaaaaatttgtttttggtccc 14655461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 318062 - 318017
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  318062 tcgttttggttttagtccctg-taaaaaaaaaattgtttttggtccc 318017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 15962355 - 15962309
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||||    
T  15962355 ctcgttttggttttagtccctgtaaaaaaaaaaattgtttttggtcc 15962309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 24274097 - 24274055
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttg 45  Q
    ||||||||||||||||||||||||||| ||||| |||||||||    
T  24274097 ctcgttttggttttagtccctggtaaaaaaaaatttgtttttg 24274055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 34990280 - 34990234
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||    
T  34990280 tcgttttggttttagtccctgtaaaaaaaaaaattgtttttggtccc 34990234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11448569 - 11448618
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||| |  ||| ||||||||||||||||||||    
T  11448569 gtctcgttttggttttagtccccgtaaaaaaaaaaattgtttttggtccc 11448618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 1890093 - 1890141
Alignment:
Q  3 ctcgttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  1890093 ctcgttttgattttagtccctggtaaaaaaaaaaattgtttttggtccc 1890141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 2616197 - 2616154
Alignment:
Q  6 gttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||    
T  2616197 gttttggttttagtccctg-taaaaaaaaaattgtttttggtccc 2616154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 6468347 - 6468391
Alignment:
Q  6 gttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||  ||| ||||||||||||||||||||    
T  6468347 gttttggttttagtccctgtgaaaaaaaaaattgtttttggtccc 6468391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 6591158 - 6591202
Alignment:
Q  6 gttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||||    
T  6591158 gttttgattttagtccctggtaaaaaaaaatttgtttttggtccc 6591202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 12419904 - 12419856
Alignment:
Q  3 ctcgttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  12419904 ctcgttttggttttagtccctggtaaaaaaaaaaattgtttttgatccc 12419856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 22822617 - 22822569
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtccc 50  Q
    ||||||||| ||||||||||||||||| |||||| ||||||||||||||    
T  22822617 ctcgttttgattttagtccctggtaaaaaaaaaatttgtttttggtccc 22822569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 33131816 - 33131773
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggt 47  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||    
T  33131816 ctcgttttggttttagtccct-gtaaaaaaaaaattgtttttggt 33131773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 33808654 - 33808702
Alignment:
Q  3 ctcgttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  33808654 ctcgttttgattttagtccctggtaaaaaaaaaaattgtttttggtccc 33808702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 19276001 - 19275958
Alignment:
Q  7 ttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||    
T  19276001 ttttggttttagtccctgtaaaaaaaaaaattgtttttggtccc 19275958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 21995098 - 21995145
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||  ||| |||||||||||| |||||||    
T  21995098 ctcgttttggttttagtccctgtaaaaaaaaaaattgtttatggtccc 21995145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 31167166 - 31167120
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||||||    
T  31167166 ctcgttttgattttagtccctggtaaa-aaaaatttgtttttggtccc 31167120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6591410 - 6591360
Alignment:
Q  1 gtctcgttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||  ||||| ||| ||||||||||||||||||||    
T  6591410 gtctcgttttggttttagtttctggtaaaaaaaaaaattgtttttggtccc 6591360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 10091071 - 10091115
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  10091071 tcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtccc 10091115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 30929010 - 30928965
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||||| ||||| ||||| |||||||||||||    
T  30929010 ctcgttttggttttagtccct-gtaaaaaaaaatttgtttttggtcc 30928965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 26375725 - 26375773
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||| ||||| ||||| ||||||||||||||| ||||    
T  26375725 gtctcgttttggttttaatccct-gtaaaaaaaaaattgtttttgttccc 26375773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 6e-16; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 15635673 - 15635626
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15635673 ctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 15635626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 18633633 - 18633680
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18633633 ctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 18633680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 29875434 - 29875481
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  29875434 ctcgttttggttttagtccctggtaaaaaaaaatttgtttttggtccc 29875481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 38496747 - 38496701
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  38496747 tcgttttggttttagtccctggtaaaaaaaaatttgtttttggtccc 38496701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21124945 - 21124994
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||||    
T  21124945 gtctcgttttggttttagtccctgtaaaaaaaaaaattgtttttggtccc 21124994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 35166126 - 35166078
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  35166126 gtctcgttttggttttagtccctggtaaa-aaaaaattatttttggtccc 35166078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42207274 - 42207322
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  42207274 gtctcgttttggttttagtccct-gtaaaaaaaaaattgtttttggtccc 42207322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 7075606 - 7075652
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  7075606 ctcgttttggttttagtccct-gtaaaaaaaaaattgtttttggtccc 7075652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 25561740 - 25561787
Alignment:
Q  4 tcgttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  25561740 tcgttttggttttagtccctggtaaaaaaaaaaattgtttttggtccc 25561787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 29151817 - 29151770
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  29151817 ctcgttttggttttagttcctggtaaaaaaataattgtttttggtccc 29151770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 29172557 - 29172604
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtcc 49  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||    
T  29172557 ctcgttttggttttagtccctggtaaaaaaaaaatttgtttttggtcc 29172604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 29172852 - 29172805
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| || || ||||||||||||||    
T  29172852 ctcgttttggttttagtccctggtaaaaaagaatttgtttttggtccc 29172805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 28550861 - 28550906
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||    
T  28550861 ctcgttttggttttagtccctgttaaa-aaaaaattgtttttggtcc 28550906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 38786194 - 38786239
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  38786194 tcgttttggttttagtccctg-taaaaaaaaaattgtttttggtccc 38786239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4203738 - 4203690
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||| |||||||||||| |||| ||||||||||||||||||||    
T  4203738 gtctcgttttgattttagtccctg-taaaaaaaaaattgtttttggtccc 4203690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10744022 - 10743974
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  10744022 gtctcgttttggttttagtccct-gtaaaaaaaaatttgtttttggtccc 10743974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 15635408 - 15635457
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||| |||||||||||||||||||||||| |||| | |||||||||||||    
T  15635408 gtcttgttttggttttagtccctggtaaaaaaaataatgtttttggtccc 15635457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40167976 - 40167927
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||  ||| ||||| ||||||||||||||    
T  40167976 gtctcgttttggttttagtccctgtaaaaaaaaaatttgtttttggtccc 40167927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 6118166 - 6118214
Alignment:
Q  3 ctcgttttgg-ttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  6118166 ctcgttttgggttttagtccctggtaaaaaaaaaattgtttttgatccc 6118214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 18633927 - 18633879
Alignment:
Q  3 ctcgttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||||||||    
T  18633927 ctcgttttggttttactccctggtaaaaaaaaaaattgtttttggtccc 18633879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 2217820 - 2217774
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||||    
T  2217820 ctcgttttggttttagtcccta-taaaaaaaaaattgtttttggtccc 2217774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 9179886 - 9179840
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||| |||||| |||| ||||||||||||||||||||    
T  9179886 ctcgttttggttttattccctg-taaaaaaaaaattgtttttggtccc 9179840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 16038411 - 16038458
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||| ||  ||| ||||||||||||||||||||    
T  16038411 ctcgttttggttttagtccttgtaaaaaaaaaaattgtttttggtccc 16038458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 34125341 - 34125387
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||| || |||| ||||||||||||||||||||    
T  34125341 ctcgttttggttttagtccttg-taaaaaaaaaattgtttttggtccc 34125387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 40029463 - 40029418
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  40029463 ctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtccc 40029418  T

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Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 9179628 - 9179674
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||  ||| ||||||||| ||||||||||    
T  9179628 tcgttttggttttagtccctgtaaaaaaaaaaattgattttggtccc 9179674  T

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Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 21050610 - 21050655
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||| |||||||||||| |||| ||||||||||||||||||||    
T  21050610 tcgttttgattttagtccctg-taaaaaaaaaattgtttttggtccc 21050655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24782021 - 24782071
Alignment:
Q  1 gtctcgttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||||| | ||| ||||| ||||||||||||||    
T  24782021 gtctcgttttggttttagtccctgttaaaagaaaaatttgtttttggtccc 24782071  T

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Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 29875691 - 29875645
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaa-attgtttttggtc 48  Q
    ||||||||||||||||||||||||||| |||||  ||||||||||||    
T  29875691 ctcgttttggttttagtccctggtaaagaaaaattttgtttttggtc 29875645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 35167131 - 35167085
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||||||  ||| ||||| |||||||||||||    
T  35167131 ctcgttttggttttagtccctgcaaaaaaaaaatttgtttttggtcc 35167085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 36578049 - 36578004
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||||| ||||| ||||| |||||||||||||    
T  36578049 ctcgttttggttttagtccct-gtaaaaaaaaatttgtttttggtcc 36578004  T

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Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 29151550 - 29151595
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggt 47  Q
    ||||||||| ||||||||||||||||| |||||| |||||||||||    
T  29151550 ctcgttttgattttagtccctggtaaaaaaaaaatttgtttttggt 29151595  T

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Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 36577754 - 36577797
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttgg 46  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  36577754 gtctcgttttggttttagtccct-gtaaa-aaaaaattgtttttgg 36577797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 2217528 - 2217576
Alignment:
Q  3 ctcgttttggttttagtccctg-gtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||   ||| ||||||||||||||||||||    
T  2217528 ctcgttttggttttagtccctgtaaaaaaaaaaaattgtttttggtccc 2217576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14318077 - 14318123
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  14318077 gtctcgttttggttttagt-ccttgtaaa-aaaaaattgtttttggtcc 14318123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26133381 - 26133333
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||||||||  ||| ||||| |||||||| ||||    
T  26133381 gtctcgttttggttttagtccctgtaaaaaaaaaatttgttttttgtcc 26133333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 30800528 - 30800572
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  30800528 ctcgttttggttttagtccct-gtaa--aaaaaattgtttttggtccc 30800572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 38496457 - 38496501
Alignment:
Q  7 ttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||| |||| ||| ||||||||||||||||||||    
T  38496457 ttttggttttagtccttggtaaaaaaaaaaattgtttttggtccc 38496501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 39379273 - 39379305
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaa 35  Q
    ||||||||||||||||||||||||||| |||||    
T  39379273 ctcgttttggttttagtccctggtaaaaaaaaa 39379305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 6e-16; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 28427574 - 28427527
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28427574 ctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 28427527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 37506901 - 37506948
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37506901 ctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 37506948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 51834907 - 51834861
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  51834907 tcgttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 51834861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 28942871 - 28942826
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtc 48  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  28942871 ctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtc 28942826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34238630 - 34238679
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  34238630 gtctcgttttggttttagtccttggtaaaaaaaaaattgtttttggtccc 34238679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 39436750 - 39436799
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  39436750 gtctcgttttggttttagtccctggtaaaaaaaaatttgtttttggtccc 39436799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 3151784 - 3151831
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  3151784 ctcgttttggttttagtccctagtaaaaaaaaaattgtttttggtccc 3151831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 3152077 - 3152030
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  3152077 ctcgttttggttttagtccctggtaaaaaaaaatttgtttttggtccc 3152030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 10977012 - 10977059
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||    
T  10977012 ctcgttttggttttagtccctggtaaaaaaaaaattgtttctggtccc 10977059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 20611055 - 20611101
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||    
T  20611055 tcgttttggttttagtctctggtaaaaaaaaaattgtttttggtccc 20611101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 39288605 - 39288651
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggt 47  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||    
T  39288605 gtctcgttttggttttagtctctggtaaaaaaaaaattgtttttggt 39288651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 8510494 - 8510446
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtccca 51  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||    
T  8510494 tcgttttggttttagtccctggtaaaaaaaaaatttgtttttggtccca 8510446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 22156259 - 22156211
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  22156259 ctcgttttggttttagtccctggtaaaaaaaaaatttgtttttggtccc 22156211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 26799922 - 26799970
Alignment:
Q  3 ctcgttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  26799922 ctcgttttggttttagtccctggtaaaaaaaaaaattgtttttggtccc 26799970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 39437075 - 39437027
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  39437075 ctcgttttggttttagtccctggtaaaaaaaaaatttgtttttggtccc 39437027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 10778697 - 10778651
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  10778697 ctcgttttggttttagtccctggtaaa-aaaaaattgttattggtccc 10778651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28427277 - 28427324
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggt 47  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||    
T  28427277 gtctcgttttggttttagtccctggtaaaaaaaaaatttgtttttggt 28427324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 37507188 - 37507142
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||    
T  37507188 ctcgttttggttttagtccctgataaa-aaaaaattgtttttggtccc 37507142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 39288864 - 39288818
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  39288864 ctcgttttggttttagtccctggtaaa-aaaaaattgattttggtccc 39288818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 49670767 - 49670725
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaattgtttttggt 47  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  49670767 tcgttttggttttagtccctggtaaa-aaaaaattgtttttggt 49670725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 51834642 - 51834689
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  51834642 ctcgttttggttttagtccctggtaaaaaaaattttgtttttggtccc 51834689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 20612864 - 20612819
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  20612864 ctcgttttggttttagtccctggtaaa-aaaaatttgtttttggtcc 20612819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22155961 - 22156011
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtccc 50  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||||||||||    
T  22155961 gtctcgttttgattttagtccctggtaaaaaaaaaatttgtttttggtccc 22156011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40169376 - 40169426
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtccc 50  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||||||||||    
T  40169376 gtctcgttttgattttagtccctggtaaaaaaaaaatttgtttttggtccc 40169426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4513588 - 4513540
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||||||||||    
T  4513588 gtctcgttttggttttagtccct-gtaaaaaaacaattgtttttggtccc 4513540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 13584330 - 13584285
Alignment:
Q  6 gttttggttttagtccctggtaaataaaaaa-ttgtttttggtccc 50  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||    
T  13584330 gttttggttttagtccctggtaaaaaaaaaatttgtttttggtccc 13584285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 25710836 - 25710791
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtc 48  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||    
T  25710836 ctcgttttggttttagtccctgtaaaaaaaaaaattgtttttggtc 25710791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 30130190 - 30130238
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  30130190 gtctcgttttggttttagttcctg-taaaaaaaaaattgtttttggtccc 30130238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31869924 - 31869876
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||||    
T  31869924 gtctcgttttagttttagtccctg-taaaaaaaaaattgtttttggtccc 31869876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 45161145 - 45161193
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  45161145 gtctcgttttggttttagtctctg-taaaaaaaaaattgtttttggtccc 45161193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 8510252 - 8510296
Alignment:
Q  7 ttttggttttagtccctggtaaataaaaaa-ttgtttttggtccc 50  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||    
T  8510252 ttttggttttagtccctggtaaaaaaaaaatttgtttttggtccc 8510296  T

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Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 10977307 - 10977259
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataa-aaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  10977307 ctcgttttggttttagtccctggtaaaaaagaaatttgtttttggtccc 10977259  T

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Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14633857 - 14633806
Alignment:
Q  1 gtctcgttttggttttagtccctggt--aaataaaaaattgtttttggtccc 50  Q
    |||| |||||||||||||||||||||  ||| ||||||||||||||||||||    
T  14633857 gtcttgttttggttttagtccctggttaaaaaaaaaaattgtttttggtccc 14633806  T

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Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 40979676 - 40979629
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccca 51  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  40979676 ctcgttttggttttaatccctg-taaaaaaaaaattgtttttggtccca 40979629  T

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Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 49670511 - 49670554
Alignment:
Q  6 gttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||    
T  49670511 gttttggttttaatccctggtaaa-aaaaaattgtttttggtccc 49670554  T

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Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 4513297 - 4513342
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  4513297 ctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtccc 4513342  T

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Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 20757434 - 20757480
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||||    
T  20757434 ctcgttttggttttagtccct-ataaaaaaaaaattgtttttggtccc 20757480  T

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Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 51500651 - 51500605
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  51500651 ctcgttttggttttagtccct-gcaaaaaaaaaattgtttttggtccc 51500605  T

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Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 4950071 - 4950116
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||||| ||||| ||||| |||||||||||||    
T  4950071 ctcgttttggttttagtccct-gtaaaaaaaaatttgtttttggtcc 4950116  T

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Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 9863370 - 9863324
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||||||  ||| ||||||| |||||||||||    
T  9863370 ctcgttttggttttagtccctgtaaaaaaaaaaatagtttttggtcc 9863324  T

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Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40169622 - 40169572
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaa-attgtttttggtccc 50  Q
    ||||||||||| ||||||||||||||||| |||||  ||||||||||||||    
T  40169622 gtctcgttttgattttagtccctggtaaaaaaaaattttgtttttggtccc 40169572  T

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Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 51759851 - 51759901
Alignment:
Q  1 gtctcgttttggttttagtccctg-gtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||   ||| ||||||||||||||||||||    
T  51759851 gtctcgttttggttttagtccctgtaaaaaaaaaaaattgtttttggtccc 51759901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 3361781 - 3361736
Alignment:
Q  6 gttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  3361781 gttttggttttagtctctggtaaaaaaaaaaattgtttttggtccc 3361736  T

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Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4814867 - 4814820
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  4814867 gtctcgttttggttttagtccct-ataaa-aaaaaattgtttttggtccc 4814820  T

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Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 31869626 - 31869675
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||  ||| ||||| ||| ||||||||||    
T  31869626 gtctcgttttggttttagtccctgtaaaaaaaaaatttgattttggtccc 31869675  T

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Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 14633579 - 14633627
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaa-attgtttttggtccc 50  Q
    |||||||||||||||| |||||||||| |||||  ||||||||||||||    
T  14633579 ctcgttttggttttaggccctggtaaaaaaaaattttgtttttggtccc 14633627  T

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Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 45320661 - 45320701
Alignment:
Q  10 tggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||  ||| ||||||||||||||||||||    
T  45320661 tggttttagtccctgtaaaaaaaaaaattgtttttggtccc 45320701  T

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Target: chr2 (Bit Score: 44; Significance: 6e-16; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 17541416 - 17541463
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17541416 ctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 17541463  T

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Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 19184117 - 19184070
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19184117 ctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 19184070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 26813898 - 26813945
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtc 48  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26813898 gtctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtc 26813945  T

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Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 37272068 - 37272021
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37272068 ctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 37272021  T

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Target: chr2; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 38980219 - 38980172
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38980219 ctcgttttggttttagtccctggtaaaaaaaaaattgtttttggtccc 38980172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5790867 - 5790818
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  5790867 gtctcgttttggttttagtccctgataaaaaaaaaattgtttttggtccc 5790818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17541744 - 17541695
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  17541744 gtctcgttttggttttagtccttggtaaaaaaaaaattgtttttggtccc 17541695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 17912481 - 17912530
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  17912481 gtctcgttttggttttagtctctggtaaaaaaaaaattgtttttggtccc 17912530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 7814280 - 7814325
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  7814280 ctcgttttggttttagtccctggtaaa-aaaaaattgtttttggtcc 7814325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38639444 - 38639492
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  38639444 gtctcgttttggttttagtctctggtaaa-aaaaaattgtttttggtccc 38639492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 17912777 - 17912730
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||| |||||||| ||||| ||||||||||||||    
T  17912777 ctcgttttggttttagtctctggtaaaaaaaaatttgtttttggtccc 17912730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 37271773 - 37271820
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtcc 49  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||    
T  37271773 ctcgttttggttttagtccctggtaaaaaaaaaatttgtttttggtcc 37271820  T

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Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 43789157 - 43789110
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtccc 50  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||    
T  43789157 tcgttttggttttagtccctggtaaaaaaaaaatttgtttttggtccc 43789110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 38979923 - 38979969
Alignment:
Q  2 tctcgttttggttttagtccctggt-aaataaaaaattgtttttggt 47  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  38979923 tctcgttttggttttagtccctggtaaaaaaaaaaattgtttttggt 38979969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 41693709 - 41693755
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||    
T  41693709 tcgttttggttttagtccctgtaaaaaaaaaaattgtttttggtccc 41693755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 22881936 - 22881889
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  22881936 gtctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtccc 22881889  T

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Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 43597467 - 43597420
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  43597467 gtctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtccc 43597420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2265365 - 2265322
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttg 45  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||    
T  2265365 gtctcgttttggttttagtccct-gtaaaaaaaaaattgtttttg 2265322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 26814195 - 26814147
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| |||||| |||||||| |||||    
T  26814195 ctcgttttggttttagtccctggtaaaaaaaaaatttgttttttgtccc 26814147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 43788892 - 43788940
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtccc 50  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  43788892 ctcgttttggttttagtccttggtaaaaaaaaaatttgtttttggtccc 43788940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 44073773 - 44073725
Alignment:
Q  3 ctcgttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  44073773 ctcgttttgattttagtccctggtaaaaaaaaaaattgtttttggtccc 44073725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 24483434 - 24483479
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  24483434 ctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtccc 24483479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 38731863 - 38731908
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  38731863 ctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtccc 38731908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 43710674 - 43710629
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  43710674 ctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtccc 43710629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 9195172 - 9195127
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||||| ||||| ||||| |||||||||||||    
T  9195172 ctcgttttggttttagtccct-gtaaaaaaaaatttgtttttggtcc 9195127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 19183814 - 19183848
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaa 35  Q
    ||||||||||||||||||||||||||||| |||||    
T  19183814 gtctcgttttggttttagtccctggtaaaaaaaaa 19183848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 25954150 - 25954196
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||| ||  ||| ||||||||||||||||||||    
T  25954150 tcgttttggttttagtccttgtaaaaaaaaaaattgtttttggtccc 25954196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 26707908 - 26707952
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  26707908 tcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtccc 26707952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 32691347 - 32691392
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||    
T  32691347 ctcgttttggttttaatccctg-taaaaaaaaaattgtttttggtcc 32691392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14393097 - 14393049
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| | ||||| |||||||||||||| |||||    
T  14393097 gtctcgttttggttttagtccat-gtaaaaaaaaaattgttttttgtccc 14393049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 41791056 - 41791097
Alignment:
Q  7 ttttggttttagtccctggtaaataaaaaattgtttttggtc 48  Q
    ||||||||||||||||||  ||| ||||||||||||||||||    
T  41791056 ttttggttttagtccctgtaaaaaaaaaaattgtttttggtc 41791097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10665016 - 10665063
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||| | |||||||||| |||| |||||||||||||||||||    
T  10665016 gtctcgttttgatattagtccctg-taaaaaaaaaattgtttttggtcc 10665063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 26708170 - 26708122
Alignment:
Q  3 ctcgttttggttttagtccctg-gtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||   ||| ||||||||||||||||||||    
T  26708170 ctcgttttggttttagtccctgtaaaaaaaaaaaattgtttttggtccc 26708122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 4)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4073 - 4122
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  4073 gtctcgttttggttttagtccttggtaaaaaaaaaattgtttttggtccc 4122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4256 - 4207
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  4256 gtctcgttttggttttagtccttggtaaaaaaaaaattgtttttggtccc 4207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19255 - 19304
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  19255 gtctcgttttggttttagtccttggtaaaaaaaaaattgtttttggtccc 19304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19438 - 19389
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  19438 gtctcgttttggttttagtccttggtaaaaaaaaaattgtttttggtccc 19389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 1526138 - 1526091
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  1526138 ctcgttttggttttagtccctggtaaaaaaataattgtttttggtccc 1526091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 8094511 - 8094561
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaatt-gtttttggtccc 50  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  8094511 gtctcgttttggttttagtccctggtaaaaaaaaaattcgtttttggtccc 8094561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38930334 - 38930383
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  38930334 gtctcgttttggttttagttcctggtaaaaaaaaatttgtttttggtccc 38930383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14238783 - 14238831
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  14238783 gtctcgttttggttttagtccctgtgaaaaaaaaaattgtttttggtcc 14238831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 16643698 - 16643742
Alignment:
Q  6 gttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  16643698 gttttggttttagtccctggtaaaaaaaaatttgtttttggtccc 16643742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 14239046 - 14238999
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||    
T  14239046 ctcgttttggttttagtccctgtgaaaaaaaaaattgtttttggtccc 14238999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 29488075 - 29488030
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  29488075 tcgttttggttttagtccctg-taaaaaaaaaattgtttttggtccc 29488030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19494151 - 19494200
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||| ||||||||| ||| | ||||||||||||||    
T  19494151 gtctcgttttggttttagttcctggtaaaaaaatatttgtttttggtccc 19494200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 14489041 - 14488995
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  14489041 gtctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtcc 14488995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 16789335 - 16789288
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccca 51  Q
    ||||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  16789335 ctcgttttggttttagtccct-gtaaaaaaaaatttgtttttggtccca 16789288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 38930630 - 38930582
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtccc 50  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  38930630 ctcgttttggttttaatccctggtaaaaaaaaaatttgtttttggtccc 38930582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 1162944 - 1162991
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtccc 50  Q
    |||||||| ||||||||||||||||| |||||| ||||||||||||||    
T  1162944 tcgttttgattttagtccctggtaaaaaaaaaatttgtttttggtccc 1162991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 6146550 - 6146596
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||| || |||| ||||||||||||||||||||    
T  6146550 ctcgttttggttttagtccttg-taaaaaaaaaattgtttttggtccc 6146596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 14495103 - 14495150
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||| ||||  ||| ||||||||||||||||||||    
T  14495103 ctcgttttggttttagttcctgtaaaaaaaaaaattgtttttggtccc 14495150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 15719689 - 15719736
Alignment:
Q  2 tctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||||| |  ||| |||||||||||||||||||    
T  15719689 tctcgttttggttttagtcccggtaaaaaaaaaaattgtttttggtcc 15719736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 29158636 - 29158590
Alignment:
Q  2 tctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    |||||||||||||||||||| || |||| |||||||||||||||||||    
T  29158636 tctcgttttggttttagtccttg-taaaaaaaaaattgtttttggtcc 29158590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 32418352 - 32418398
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||| || |||| ||||||||||||||||||||    
T  32418352 ctcgttttggttttagtccttg-taaaaaaaaaattgtttttggtccc 32418398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 35143810 - 35143764
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  35143810 ctcgttttggttttagtccct-gaaaaaaaaaaattgtttttggtccc 35143764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 1685148 - 1685194
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtc 48  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||    
T  1685148 ctcgttttggttttagtccttggtaaaaaaaaaatttgtttttggtc 1685194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 21125987 - 21125945
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttg 45  Q
    ||||||||||||||||||||||  ||| |||||||||||||||    
T  21125987 ctcgttttggttttagtccctgtaaaaaaaaaaattgtttttg 21125945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 22917598 - 22917647
Alignment:
Q  3 ctcgttttggttttagtccctggt--aaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||||  ||| ||||||||| ||||||||||    
T  22917598 ctcgttttggttttagtccctggtaaaaaaaaaaaattgattttggtccc 22917647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 24954976 - 24954931
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  24954976 ctcgttttggttttagtccctagtaaa-aaaaaattatttttggtcc 24954931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 40844191 - 40844235
Alignment:
Q  4 tcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  40844191 tcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtccc 40844235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 1163238 - 1163193
Alignment:
Q  5 cgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    |||||| ||||||||| |||||||| ||||| ||||||||||||||    
T  1163238 cgttttagttttagtcgctggtaaaaaaaaatttgtttttggtccc 1163193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 8094807 - 8094762
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggt 47  Q
    |||||||||||||||||||| |||||| |||||| |||||||||||    
T  8094807 ctcgttttggttttagtccccggtaaaaaaaaaatttgtttttggt 8094762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 1525843 - 1525891
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtccc 50  Q
    |||||||||||||||||| |||| ||| |||||| ||||||||||||||    
T  1525843 ctcgttttggttttagtctctggcaaaaaaaaaatttgtttttggtccc 1525891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 16644010 - 16643962
Alignment:
Q  3 ctcgttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||||| ||| ||||  ||||||||||||||    
T  16644010 ctcgttttggttttagtccctggtaaaacaaaattttgtttttggtccc 16643962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18549541 - 18549495
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||||    
T  18549541 gtctcgttttggttttagtccct-gtaaa-aaaaaaatgtttttggtcc 18549495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 22917887 - 22917847
Alignment:
Q  10 tggttttagtccctggt-aaataaaaaattgtttttggtcc 49  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  22917887 tggttttagtccctggtaaaaaaaaaaattgtttttggtcc 22917847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 43477197 - 43477245
Alignment:
Q  3 ctcgttttggttttagtccctg-gtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||||   ||| ||||||||||||||||||||    
T  43477197 ctcgttttggttttagtccctgtaaaaaaaaaaaattgtttttggtccc 43477245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1343 - 1393
Alignment:
Q  1 gtctcgttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  1343 gtctcgttttggttttagtccctggtaaaaaaaaaaattgtttttggtccc 1393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 1610 - 1562
Alignment:
Q  3 ctcgttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  1610 ctcgttttggttttagtccctggtaaaaaaaaaaattgtttttggtccc 1562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 8581 - 8629
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaa-ttgtttttggtccc 50  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  8581 ctcgttttggttttagtccctggtaaaaaaaaaatttgtttttggtccc 8629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12557 - 12606
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||  ||| ||||||||||||||||||||    
T  12557 gtctcgttttggttttagtccttgtaaaaaaaaaaattgtttttggtccc 12606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14980 - 14932
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||| |||||||||||||||||| |||| ||||||||||||||||||||    
T  14980 gtctcattttggttttagtccctg-taaaaaaaaaattgtttttggtccc 14932  T

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Target: scaffold0210; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 14731 - 14771
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttt 43  Q
    ||||||||||||||||||||||  ||| |||||||||||||    
T  14731 ctcgttttggttttagtccctgtgaaaaaaaaaattgtttt 14771  T

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Target: scaffold0051 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5676 - 5625
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaa--ttgtttttggtccc 50  Q
    |||| |||||||||||||||||||||||| ||||||  ||||||||||||||    
T  5676 gtcttgttttggttttagtccctggtaaaaaaaaaaatttgtttttggtccc 5625  T

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Target: scaffold0051; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 5436 - 5478
Alignment:
Q  6 gttttggttttagtccctggtaaataaaaaattgtttttggtc 48  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||    
T  5436 gttttggttttagtctctggtaaaaaaaaatttgtttttggtc 5478  T

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Target: scaffold1001 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 2812 - 2857
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  2812 ctcgttttggttttagtccct-gtaaa-aaaaaattgtttttggtccc 2857  T

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Target: scaffold0179 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3259 - 3214
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggt 47  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||||||    
T  3259 gtctcgttttggttttagtccct-gtaaaaaaaaatttgtttttggt 3214  T

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Target: scaffold0166 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24404 - 24454
Alignment:
Q  1 gtctcgttttggttttagtccctggt-aaataaaaaattgtttttggtccc 50  Q
    |||||||||||||||||||||||| | ||| ||||| ||||||||||||||    
T  24404 gtctcgttttggttttagtccctgttaaaagaaaaatttgtttttggtccc 24454  T

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Target: scaffold0065 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3564 - 3611
Alignment:
Q  1 gtctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||||||||||    
T  3564 gtctcgttttggttttagt-ccttgtaaa-aaaaaattgtttttggtccc 3611  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 366239 - 366195
Alignment:
Q  3 ctcgttttggttttagtccctggtaaataaaaaattgtttttggtccc 50  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  366239 ctcgttttggttttagtccct-gtaa--aaaaaattgtttttggtccc 366195  T

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