View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14249_high_9 (Length: 264)
Name: NF14249_high_9
Description: NF14249
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14249_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 176; Significance: 7e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 29 - 249
Target Start/End: Original strand, 40870564 - 40870786
Alignment:
| Q |
29 |
ttgttattttggtgaggtatgattgtatactaaaacagaattgacatgatttccaacgtgtaaaataacagtgacatgtnnnnnnnn--ttgggtcaaat |
126 |
Q |
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| T |
40870564 |
ttgttattttggtgaggtatgattgtatactacaacagaattgacatgatttccaacgtgtaaaataacagtgacatgtaaaaaaaaaattgggtcaaat |
40870663 |
T |
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| Q |
127 |
taatcttagatattctttattcattggaattttacaagacttgtgcggaagagtcgaattaggcactccttcaattgagccaaagttagtccctcacgat |
226 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40870664 |
taatcttagatattctttattcattggaattttacaagatttgtgcggaagagtcgaattaggcactccttcaattgagccaaagttagtccctcacgat |
40870763 |
T |
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| Q |
227 |
aagtaaaaagtttacatactttt |
249 |
Q |
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| T |
40870764 |
aaggaaaaagtttacatactttt |
40870786 |
T |
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