View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14251_high_13 (Length: 341)
Name: NF14251_high_13
Description: NF14251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14251_high_13 |
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Alignment Details
Target: chr3 (Bit Score: 305; Significance: 1e-172; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 32820479 - 32820807
Alignment:
| Q |
1 |
cttatgattccttcacagttttcaatataataagcaat-aagttgcacagtctaaaaatttaccgcgtaacttccacgccaaaatgactttttcccactc |
99 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32820479 |
cttatgattccttcacagttttcaatataataagcaattaagttgcacagtctaaaaatttaccgcgtaacttccacgccaaaatgactttttcccactc |
32820578 |
T |
|
| Q |
100 |
acttttcccgccttatttagttagctatgatgaagtgcttaatgggagtaataatatataaatgctgacgtggcttcttattgatgctaacactttttgt |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
32820579 |
acttttcccgccttatttagttagctatgatgaagtgcttaatgggagtaataatatataaatgctgatgtggcttcttattgatgctaacactttttgt |
32820678 |
T |
|
| Q |
200 |
ttgtgtgttgagaaaacaattataagtgctttgttttcttaacatactttatgctatgtatgaaaacttgtgtttttattttattcaccacaattttctt |
299 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |
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| T |
32820679 |
ttgtgtgttgagaaaacaattataagtgctttgttttcttaacatactttatgctatgtatgaaaacttgtgtttttattttattcatcacaattctctt |
32820778 |
T |
|
| Q |
300 |
cttaaacccatgcttagttcctctcacct |
328 |
Q |
| |
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|||||||||||||||||||||||||||| |
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| T |
32820779 |
gttaaacccatgcttagttcctctcacct |
32820807 |
T |
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