View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14251_high_8 (Length: 446)
Name: NF14251_high_8
Description: NF14251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14251_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 388; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 5 - 432
Target Start/End: Complemental strand, 10666608 - 10666181
Alignment:
| Q |
5 |
gttgcagtagtgttagacactcagacacaaacacatgtcatacaaatgtcggtactattaaatagtgttattctctctttgtcccttccatggttctaat |
104 |
Q |
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| T |
10666608 |
gttgcagtagtgttagacactcagacacaaacacatgtcatgcaaatgtcggtactattaaatagtgttattctctctttgtcccttccatggttctaat |
10666509 |
T |
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| Q |
105 |
ctctaatattctccttgtaaatggttttgttctaattgcagtggttcaagaagaaaaacaaaaatgctctttatgaagcattggaaaaagtcaaaggagg |
204 |
Q |
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| T |
10666508 |
ctctaatatttttcttgtaaatggttttgttctaattgcagtggttcaagaagaaaaacaaaaatgctctttatgaagcattggaaaaagtcaaaggagg |
10666409 |
T |
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| Q |
205 |
tacttaccttgttcaatttttgttcaatttttcattttaatgtttagagttcggtgtataactaatattttctctttcagagcttatgtcgatgggatct |
304 |
Q |
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| T |
10666408 |
tacttaccttgttcaatttttgttaaatttttcattttaatgtttagagtttggtgtataactaatattttctctttcagagcttatgttgatgggattt |
10666309 |
T |
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| Q |
305 |
atacccttgctcctaactgtgttccaagattatatttccaaaatatgcatatcaaaagaagttggatcaacttggcatccttgttccactccaaaaacaa |
404 |
Q |
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| T |
10666308 |
atatccttgctcctaactgtgttccaagattatatttccaaaatatgcatatcagaaaaagttggatcaacttggcatccttgttccactccaaaaacaa |
10666209 |
T |
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| Q |
405 |
aaactgcatctaatgatgaaaattctga |
432 |
Q |
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| T |
10666208 |
aaactgcatctaatgatgaaaattctga |
10666181 |
T |
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