View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14251_low_1 (Length: 776)

Name: NF14251_low_1
Description: NF14251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14251_low_1
NF14251_low_1
[»] chr2 (17 HSPs)
chr2 (135-759)||(7395690-7396315)
chr2 (136-318)||(7384806-7384988)
chr2 (167-336)||(11312050-11312230)
chr2 (46-138)||(7395460-7395552)
chr2 (22-144)||(9104535-9104657)
chr2 (28-136)||(32914476-32914584)
chr2 (18-78)||(8322179-8322239)
chr2 (18-103)||(40095798-40095883)
chr2 (46-142)||(6858958-6859054)
chr2 (29-136)||(37069920-37070027)
chr2 (22-113)||(18565751-18565842)
chr2 (18-139)||(33386643-33386759)
chr2 (62-136)||(37258127-37258201)
chr2 (18-103)||(4897248-4897333)
chr2 (18-103)||(4944642-4944727)
chr2 (12-112)||(14657513-14657612)
chr2 (44-85)||(13081147-13081188)
[»] chr4 (18 HSPs)
chr4 (146-336)||(28874098-28874288)
chr4 (28-136)||(52327026-52327134)
chr4 (45-125)||(43264438-43264518)
chr4 (18-141)||(55875849-55875972)
chr4 (40-139)||(779864-779963)
chr4 (18-105)||(41377389-41377476)
chr4 (30-139)||(9268301-9268410)
chr4 (40-139)||(2681136-2681235)
chr4 (30-142)||(23559981-23560093)
chr4 (18-139)||(38567974-38568095)
chr4 (18-85)||(46382024-46382091)
chr4 (47-132)||(2714199-2714284)
chr4 (12-84)||(43354989-43355060)
chr4 (11-127)||(7907407-7907521)
chr4 (46-85)||(55876020-55876059)
chr4 (18-136)||(5415149-5415267)
chr4 (47-140)||(48262958-48263054)
chr4 (47-140)||(30875404-30875497)
[»] chr8 (15 HSPs)
chr8 (154-336)||(10733938-10734119)
chr8 (154-336)||(10738970-10739155)
chr8 (46-139)||(1156308-1156401)
chr8 (40-140)||(17312881-17312981)
chr8 (18-138)||(35158843-35158963)
chr8 (30-138)||(9682379-9682487)
chr8 (275-336)||(17909748-17909809)
chr8 (11-75)||(5191347-5191411)
chr8 (168-259)||(17702992-17703083)
chr8 (46-140)||(18227035-18227129)
chr8 (30-135)||(40278984-40279089)
chr8 (18-127)||(11425468-11425577)
chr8 (29-138)||(37479211-37479319)
chr8 (18-139)||(27594274-27594395)
chr8 (44-138)||(16577380-16577474)
[»] chr1 (18 HSPs)
chr1 (154-336)||(26023374-26023566)
chr1 (251-338)||(26028689-26028776)
chr1 (28-136)||(7168014-7168122)
chr1 (18-109)||(47394371-47394462)
chr1 (22-136)||(16679882-16679996)
chr1 (18-127)||(10574370-10574479)
chr1 (30-138)||(46823651-46823759)
chr1 (22-136)||(23571018-23571132)
chr1 (30-142)||(7900122-7900234)
chr1 (22-138)||(43496368-43496484)
chr1 (30-136)||(51613226-51613333)
chr1 (47-125)||(50428514-50428592)
chr1 (46-136)||(1035717-1035807)
chr1 (273-336)||(18188307-18188366)
chr1 (40-138)||(37457594-37457692)
chr1 (40-137)||(19993405-19993502)
chr1 (138-200)||(145380-145442)
chr1 (18-79)||(26707131-26707192)
[»] scaffold0248 (1 HSPs)
scaffold0248 (167-336)||(16078-16257)
[»] chr5 (18 HSPs)
chr5 (167-336)||(28663664-28663843)
chr5 (167-341)||(19699340-19699528)
chr5 (273-338)||(17935460-17935525)
chr5 (40-137)||(35205122-35205219)
chr5 (22-142)||(34769580-34769700)
chr5 (30-136)||(9959336-9959442)
chr5 (11-77)||(4925098-4925164)
chr5 (11-112)||(39060193-39060294)
chr5 (18-138)||(10523802-10523922)
chr5 (18-84)||(2907794-2907860)
chr5 (18-84)||(14593889-14593955)
chr5 (46-103)||(14947689-14947746)
chr5 (40-137)||(35211940-35212037)
chr5 (29-136)||(37902402-37902510)
chr5 (136-206)||(24213293-24213364)
chr5 (298-336)||(17945750-17945788)
chr5 (18-103)||(23089332-23089417)
chr5 (46-83)||(34383734-34383771)
[»] chr3 (20 HSPs)
chr3 (136-336)||(38419769-38419969)
chr3 (176-321)||(7117140-7117295)
chr3 (11-89)||(28939693-28939771)
chr3 (30-114)||(35424127-35424211)
chr3 (47-127)||(35496089-35496169)
chr3 (22-118)||(49644375-49644471)
chr3 (18-103)||(36177221-36177306)
chr3 (40-137)||(15877729-15877826)
chr3 (11-103)||(40793178-40793270)
chr3 (46-103)||(1995582-1995639)
chr3 (46-138)||(35846127-35846219)
chr3 (48-139)||(7352575-7352666)
chr3 (11-78)||(11467231-11467298)
chr3 (46-112)||(45266909-45266975)
chr3 (137-206)||(10937381-10937450)
chr3 (18-110)||(49786941-49787033)
chr3 (30-138)||(52313854-52313962)
chr3 (42-85)||(20809642-20809685)
chr3 (30-136)||(53464266-53464372)
chr3 (18-75)||(29096142-29096199)
[»] chr6 (13 HSPs)
chr6 (168-341)||(23599990-23600176)
chr6 (144-255)||(17275106-17275218)
chr6 (168-321)||(17190645-17190808)
chr6 (138-255)||(17270165-17270289)
chr6 (11-139)||(10682508-10682636)
chr6 (18-122)||(2844143-2844247)
chr6 (169-255)||(11302235-11302321)
chr6 (18-127)||(19763521-19763631)
chr6 (11-136)||(19789202-19789328)
chr6 (40-103)||(30775356-30775419)
chr6 (29-84)||(31602164-31602219)
chr6 (298-336)||(11302142-11302180)
chr6 (23-84)||(30349201-30349262)
[»] chr7 (15 HSPs)
chr7 (28-140)||(48252905-48253017)
chr7 (46-136)||(49080738-49080828)
chr7 (21-139)||(43692561-43692679)
chr7 (22-101)||(8404754-8404833)
chr7 (18-85)||(12879278-12879345)
chr7 (18-85)||(43598833-43598900)
chr7 (18-127)||(36725798-36725907)
chr7 (46-127)||(46700888-46700969)
chr7 (18-136)||(44396395-44396513)
chr7 (46-127)||(32485439-32485520)
chr7 (71-141)||(29681376-29681446)
chr7 (22-103)||(22790438-22790519)
chr7 (18-78)||(36118064-36118124)
chr7 (40-84)||(40160371-40160415)
chr7 (167-205)||(35339003-35339041)
[»] scaffold0110 (2 HSPs)
scaffold0110 (29-139)||(13770-13880)
scaffold0110 (29-139)||(21507-21617)
[»] scaffold0015 (1 HSPs)
scaffold0015 (30-141)||(56607-56718)
[»] scaffold0081 (1 HSPs)
scaffold0081 (251-310)||(7791-7850)


Alignment Details
Target: chr2 (Bit Score: 566; Significance: 0; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 566; E-Value: 0
Query Start/End: Original strand, 135 - 759
Target Start/End: Original strand, 7395690 - 7396315
Alignment:
Q  135 ctaagagtgtattgtattgcttctcaattatatctttacatggcaatgtaggtcctatttataggatacaaaagttgtgtcttccaattacatgaagagc 234  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  7395690 ctaagagtgtattgtattgcttctcaattatgtctttacatgacaatgtaggtcctatttataggatacaaaagttgcgtcttctaattacatgaagagc 7395789  T
Q  235 catgagactaaatatcaataaagccatttaatcatactagttaagaaatatagaaggtctagggacaatggacatccacgtcatattttcatttattcat 334  Q
     |||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7395790 tatgagactaaatatcaataaagtcatttaatcatagtagttaaggaatatagaaggtctagggacaatggacatccacatcatattttcatttattcat 7395889  T
Q  335 aatagtcttcatgttctaaatgaattctaagctaggaaagaattttataat-ccatcagctctaaatcatgttcaaaatctattgcggccatcattcata 433  Q
    || ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7395890 aacagtcttcatgttctaaatgaattctaagccaggaaagaattttataataccatcagctctaaatcatgttcaaaatctattgcggccatcattcata 7395989  T
Q  434 agctgcacgtgtctatgattttgacaattattttacatgtagaccaaaacaggacctgagcatcataataaaactttcatgacatcatccttgacctttc 533  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7395990 agctgcacgtgtctatgattttgacaattattttacatgtagaccaaaacaggacctgagcatcataataaaactttcatgacatcatccttgacctttc 7396089  T
Q  534 atagtacttcctcgttttgtatcagtagccttgtccctttcaaattttgaatatcataataataacaaatgagtgtttctagaaaatatgcataaatcaa 633  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7396090 atagcacttcctcgttttgtatcagtagccttgtccctttcaaattttgaatatcataataataacaaatgagtgtttctagaaaatatgcataaatcaa 7396189  T
Q  634 gacattctgtctacctttaattaccttataacaccactgctcccagacattctgtctagatcagatcctgcatctacataaatgtttaactatcttccat 733  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  7396190 gacattctgtctacctttaattaccttataacaccactgctcccagacattctgtctagatcagatcctgcatctacataaatgtttaactatctttcat 7396289  T
Q  734 tatatttctatagggagtgttctaag 759  Q
    ||||||||||||||||||||||||||    
T  7396290 tatatttctatagggagtgttctaag 7396315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 136 - 318
Target Start/End: Original strand, 7384806 - 7384988
Alignment:
Q  136 taagagtgtattgtattgcttctcaattatatctttacatggcaatgtaggtcctatttataggatacaaaagttgtgtcttccaattacatgaagagcc 235  Q
    ||||||| |||||||||||||||||| ||| |||||| |||| |||||||||||||||||||| |||||||||||||  ||| |||||||||||||||||    
T  7384806 taagagtatattgtattgcttctcaagtatgtctttatatggtaatgtaggtcctatttatagaatacaaaagttgtaactttcaattacatgaagagcc 7384905  T
Q  236 atgagactaaatatcaataaagccatttaatcatactagttaagaaatatagaaggtctagggacaatggacatccacgtcat 318  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  7384906 atgagactaaatatcaataaagtcatttagtcatattagttaagaaatatagaaggtctagggacaatggacatccacatcat 7384988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 167 - 336
Target Start/End: Complemental strand, 11312230 - 11312050
Alignment:
Q  167 tctttacatggcaa-tgtaggtcctatttataggatacaaaagttgtgtcttccaattacatgaagagccatgagactaaat----------atcaataa 255  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||          || |||||    
T  11312230 tctttacatgacaaatgtagatcctatttataggatacaaaagttgtaccttacaattacatgaagagccatgagactaaatgtcaataggaataaataa 11312131  T
Q  256 agccatttaatcatactagttaagaaatatagaaggtctagggacaatggacatccacgtcatattttcatttattcataa 336  Q
    ||  ||| | ||||| ||||||||  ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  11312130 agttattaagtcatagtagttaagggatatagaaggtctagggacaatgtacatccacatcatattttcatttattcataa 11312050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 7395460 - 7395552
Alignment:
Q  46 gtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttggtgctctaa 138  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| | ||||||||||    
T  7395460 gtttaaataattgaaaagtgtgaagtaatataaaatattaggtgggacccatttatactacccatatgagtggcatggatatgggtgctctaa 7395552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 9104657 - 9104535
Alignment:
Q  22 atatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcat 121  Q
    |||||| |||||||||  ||||| ||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||| || ||||||||||  ||    
T  9104657 atatttaaaaaatgtagttgagtggtttaaataattgagaattgtgaaataatataaaatattagatgagacccatttataccacccatatgagtgagat 9104558  T
Q  122 ggatgttggtgctctaagagtgt 144  Q
    |||||| ||||||||||| ||||    
T  9104557 ggatgtaggtgctctaagggtgt 9104535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 32914476 - 32914584
Alignment:
Q  28 gaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgt 127  Q
    ||||||||||  ||||| |||||||||||||| |||||||||||||||||||||||||  || |||||||||||||||||||||||  || |||||||||    
T  32914476 gaaaaatgtagttgagtggtttaaataattgaaaagtgtgaagtaatataaaatattatatgggacccatttatactactcatatggatgacatggatgt 32914575  T
Q  128 tggtgctct 136  Q
     ||||||||    
T  32914576 gggtgctct 32914584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 8322179 - 8322239
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataa 78  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  8322179 atgaatatttgaaaaatgtaattgagtggtttaaataattgaaaagtgtgaagtaatataa 8322239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 40095798 - 40095883
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatac 103  Q
    |||||||||| |||||||||  ||||| ||||||||||||||||||||| ||||||||||| ||||||| || |  ||||||||||    
T  40095798 atgaatatttaaaaaatgtagttgagtagtttaaataattgagaagtgtaaagtaatataatatattagatggggtccatttatac 40095883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 46 - 142
Target Start/End: Complemental strand, 6859054 - 6858958
Alignment:
Q  46 gtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttggtgctctaagagt 142  Q
    ||||||||||||| ||||||||||||||||||   ||||| ||| ||||||||||||| || |||||| |||| |||||||| | ||||| ||||||    
T  6859054 gtttaaataattgggaagtgtgaagtaatatattgtattacgtgggacccatttataccacccatatgggtggtatggatgtggatgctccaagagt 6858958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 37069920 - 37070027
Alignment:
Q  29 aaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgtt 128  Q
    ||||||||||  |||| ||||||||||||| ||||||| || |||||||  |||||| ||| ||||||||||||| || || ||| |||||||||||||     
T  37069920 aaaaatgtaagagagtggtttaaataattgggaagtgtaaaataatatattatattatgtgggacccatttataccacccaaatgggtggcatggatgtg 37070019  T
Q  129 ggtgctct 136  Q
    | ||||||    
T  37070020 gatgctct 37070027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 18565751 - 18565842
Alignment:
Q  22 atatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatg 113  Q
    |||||| |||||||||  |||||  ||||||||||||||||||   |||||||||||  |||||  |||||||||||||||| |||||||||    
T  18565751 atatttaaaaaatgtagttgagtcatttaaataattgagaagtcgaaagtaatataatgtattatatgagacccatttataccactcatatg 18565842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 33386759 - 33386643
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtg 117  Q
    ||||||||||  |||||| || ||||| ||||||||||||| ||| ||| ||||||||||     ||| ||| | ||||||||||| |||||| || |||    
T  33386759 atgaatatttagaaaatgcaattgagtggtttaaataattgggaattgtaaagtaatata-----ttatgtgggtcccatttataccactcatttgggtg 33386665  T
Q  118 gcatggatgttggtgctctaag 139  Q
    |||||||||| | |||||||||    
T  33386664 gcatggatgtggttgctctaag 33386643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 37258201 - 37258127
Alignment:
Q  62 agtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttggtgctct 136  Q
    |||||||| |||||||| ||||||  |||||||||||||||| |  |||||||||| ||||||||| | ||||||    
T  37258201 agtgtgaaataatataatatattatatgagacccatttataccatccatatgagtgacatggatgtggatgctct 37258127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 4897248 - 4897333
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatac 103  Q
    ||||||||||  ||||||||  ||||| |||||||||||||| || ||||||||||| ||| ||||||  || || ||||||||||    
T  4897248 atgaatatttagaaaatgtagttgagtagtttaaataattgaaaaatgtgaagtaatgtaatatattatatgtgatccatttatac 4897333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 4944642 - 4944727
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatac 103  Q
    ||||||||||  ||||||||  ||||| |||||||||||||| || ||||||||||| ||| ||||||  || || ||||||||||    
T  4944642 atgaatatttagaaaatgtagttgagtagtttaaataattgaaaaatgtgaagtaatgtaatatattatatgtgatccatttatac 4944727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 14657513 - 14657612
Alignment:
Q  12 agtgagatgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcata 111  Q
    ||||| ||||||||||  ||||||||  ||||| |||||||||||||  ||||||||| ||||||||  ||||| ||| || |||||||||| || ||||    
T  14657513 agtgatatgaatatttagaaaatgtagttgagtggtttaaataattggaaagtgtgaaataatataatgtattatgtgtga-ccatttataccacccata 14657611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 13081147 - 13081188
Alignment:
Q  44 ttgtttaaataattgagaagtgtgaagtaatataaaatatta 85  Q
    ||||||||||||||||||| |||||| ||| |||||||||||    
T  13081147 ttgtttaaataattgagaaatgtgaaataacataaaatatta 13081188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 9e-63; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 146 - 336
Target Start/End: Complemental strand, 28874288 - 28874098
Alignment:
Q  146 ttgtattgcttctcaattatatctttacatggcaatgtaggtcctatttataggatacaaaagttgtgtcttccaattacatgaagagccatgagactaa 245  Q
    ||||||| |||| ||| | | |||||| ||| || ||||||||||||||||||||||||||||||||  ||| |||||||||||||| ||||||||||||    
T  28874288 ttgtattacttcacaagtgtgtctttatatgacagtgtaggtcctatttataggatacaaaagttgtaacttacaattacatgaagaaccatgagactaa 28874189  T
Q  246 atatcaataaagccatttaatcatactagttaagaaatatagaaggtctagggacaatggacatccacgtcatattttcatttattcataa 336  Q
    |||||||||||| |||||| ||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  28874188 atatcaataaagtcatttagtcataatagttaagaaatatagaaggtctagggataatggacatccacatcatattttcatttattcataa 28874098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 52327026 - 52327134
Alignment:
Q  28 gaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgt 127  Q
    ||||||||||  |||||  ||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  52327026 gaaaaatgtagttgagtgatttaaataattgaaaagtgtgaagtaatataaaatattatgtgggacccatttatactactcatatgggtggcatggatgt 52327125  T
Q  128 tggtgctct 136  Q
     | ||||||    
T  52327126 ggctgctct 52327134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 45 - 125
Target Start/End: Complemental strand, 43264518 - 43264438
Alignment:
Q  45 tgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggat 125  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||| |||||||| |||| |||||||    
T  43264518 tgtttaaataattgagaagtgtgaagtaatataatatattaggtgaggtccatttataccactcatattagtgtcatggat 43264438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 55875849 - 55875972
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtg 117  Q
    |||||||||| |||||||||  ||||| |||||| |||||||||  |||||||||||||||  ||||| ||| |||||||||||||||| || ||| |||    
T  55875849 atgaatatttaaaaaatgtagttgagtggtttaagtaattgagagatgtgaagtaatataatttattatgtgggacccatttatactacacacatgggtg 55875948  T
Q  118 gcatggatgttggtgctctaagag 141  Q
    | |||||||| | |||||||||||    
T  55875949 gtatggatgtggatgctctaagag 55875972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 779963 - 779864
Alignment:
Q  40 tgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttggtgctctaag 139  Q
    ||||| ||||||||||| || || |||||||||||||||  ||||| ||||||||||||||||| || |||||| |||| |||||||| |||||||||||    
T  779963 tgagtggtttaaataatggaaaaatgtgaagtaatataatgtattatgtgagacccatttataccacccatatgggtggtatggatgtgggtgctctaag 779864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 41377389 - 41377476
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatacta 105  Q
    |||||||||| |||||||||  ||||| ||| |||||||||||||||| |||||||||||| |||||| || ||||||||||||||||    
T  41377389 atgaatatttaaaaaatgtagttgagtagttaaaataattgagaagtgggaagtaatataatatattatgtaagacccatttatacta 41377476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 9268410 - 9268301
Alignment:
Q  30 aaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatat-gagtggcatggatgtt 128  Q
    ||||||||  ||||| |||||||||||||| ||||||||||||||||||| |||||  || ||||||||||||| || ||| | |||||||||||||||     
T  9268410 aaaatgtagttgagtggtttaaataattgaaaagtgtgaagtaatataaagtatta-ctgggacccatttataccacccatgtagagtggcatggatgtg 9268312  T
Q  129 ggtgctctaag 139  Q
    |||||||||||    
T  9268311 ggtgctctaag 9268301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 2681136 - 2681235
Alignment:
Q  40 tgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatat-gagtggcatggatgttggtgctctaa 138  Q
    ||||| |||||||||||||| ||||||||||||||||||| |||||  || ||||||||||||| || ||| | ||||||||||||||| ||||||||||    
T  2681136 tgagtggtttaaataattgaaaagtgtgaagtaatataaagtatta-ctgggacccatttataccacccatgtagagtggcatggatgtgggtgctctaa 2681234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 30 - 142
Target Start/End: Complemental strand, 23560093 - 23559981
Alignment:
Q  30 aaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttg 129  Q
    ||||||||  ||||| |||||||||||||  |||||| ||||||| ||| |||||| ||| | ||||||||||| || ||| || ||||||||||||| |    
T  23560093 aaaatgtagttgagtggtttaaataattggaaagtgtaaagtaatgtaatatattatgtgggtcccatttataccacccatttgggtggcatggatgtgg 23559994  T
Q  130 gtgctctaagagt 142  Q
    |||||||||||||    
T  23559993 gtgctctaagagt 23559981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 38567974 - 38568095
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtg 117  Q
    |||||||||| |||||||||  ||||| |||||||||||||| ||||  |||||||||||| |||||  |||||  ||||| |||| ||  || | ||||    
T  38567974 atgaatatttaaaaaatgtagttgagtggtttaaataattgaaaagtaagaagtaatataatatattgagtgaggtccattcataccaccaatgtaagtg 38568073  T
Q  118 gcatggatgttggtgctctaag 139  Q
    |||||||||| | |||||||||    
T  38568074 gcatggatgtggatgctctaag 38568095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 46382024 - 46382091
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatatta 85  Q
    ||||||||||||||||| ||   |||| |||||||||||||||||||||||| |||||||| ||||||    
T  46382024 atgaatatttgaaaaatatagtggagtggtttaaataattgagaagtgtgaactaatataatatatta 46382091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 2714284 - 2714199
Alignment:
Q  47 tttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttggtg 132  Q
    ||||||||||||  |||| |||| ||||||||| ||||| |||||| |||||||||| || ||| | |||||||||||||| ||||    
T  2714284 tttaaataattggaaagtatgaaataatataaagtattacgtgagatccatttatacaacccatgtaagtggcatggatgtgggtg 2714199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 43355060 - 43354989
Alignment:
Q  12 agtgagatgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatatt 84  Q
    ||||| |||||||||| |||||||||| ||||| |||||||||||||| | |||| ||||||||||| |||||    
T  43355060 agtgatatgaatatttaaaaaatgtaattgagtggtttaaataattga-aggtgtaaagtaatataatatatt 43354989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 7907407 - 7907521
Alignment:
Q  11 gagtgagatgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcat 110  Q
    |||||| ||| ||||||  ||||||||  ||||| |||||||||||||  ||||||||||   |||||| ||||| ||| ||||||||||||| || |||    
T  7907407 gagtgatatggatatttagaaaatgtagttgagtggtttaaataattggaaagtgtgaag---tataaagtattatgtgggacccatttataccacccat 7907503  T
Q  111 -atgagtggcatggatgt 127  Q
     | |||||||||||||||    
T  7907504 aaagagtggcatggatgt 7907521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 55876059 - 55876020
Alignment:
Q  46 gtttaaataattgagaagtgtgaagtaatataaaatatta 85  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  55876059 gtttaaataattgagaagtgtgaagtaatataatatatta 55876020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 5415267 - 5415149
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtg 117  Q
    ||||||||||  ||||||||  |||||   ||||||||||| ||||||| ||||||||||| |||||| |||   ||||||||||| |  ||| || |||    
T  5415267 atgaatatttagaaaatgtagttgagtgagttaaataattgggaagtgtaaagtaatataatatattatgtggatcccatttataccatccatttgggtg 5415168  T
Q  118 gcatggatgttggtgctct 136  Q
    |||||||||| | ||||||    
T  5415167 gcatggatgtggttgctct 5415149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 48263054 - 48262958
Alignment:
Q  47 tttaaataattgagaagtgtgaagtaata---taaaatattaggtgagacccatttatactactcatatgagtggcatggatgttggtgctctaaga 140  Q
    ||||||||||||| |||||| ||||||||   ||| |||||| ||||| | ||||||||| |  ||| || ||||||||||||| | ||||||||||    
T  48263054 tttaaataattgaaaagtgtaaagtaatagtataatatattatgtgagtctcatttataccatccatttgggtggcatggatgtggatgctctaaga 48262958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 30875404 - 30875497
Alignment:
Q  47 tttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttggtgctctaaga 140  Q
    |||||||||||| ||||| | || ||||||||  ||||  ||| ||| ||||||||| || ||||||   ||||||||||| ||||||||||||    
T  30875404 tttaaataattgggaagtttaaaataatataatgtattcagtgggactcatttataccacacatatggaaggcatggatgtgggtgctctaaga 30875497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 2e-60; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 10734119 - 10733938
Alignment:
Q  154 cttctcaattatatctttacatggcaatgtaggtcctatttataggatacaaaagttgtgtcttccaattacatgaagagccatgagactaaatatcaat 253  Q
    |||| ||| |||||||||||||| ||||||||||||||||||||||||||||| |||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  10734119 cttcacaagtatatctttacatgacaatgtaggtcctatttataggatacaaa-gttgtaacttacaattacatgaagagtcatgagattaaatatcaat 10734021  T
Q  254 aaagccatttaatcatactagttaagaaatatagaaggtctagggacaatggacatccacgtcatattttcatttattcataa 336  Q
    |||| |||||| ||||| |||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10734020 aaagtcatttagtcatagtagttaaagaatatagaaggtctagggacaatggacatccacatcatattttcatttattcataa 10733938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 10739155 - 10738970
Alignment:
Q  154 cttctcaattatatctttacatggcaatgtaggtcctatttatag---gatacaaaagttgtgtcttccaattacatgaagagccatgagactaaatatc 250  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||  ||| || |||||||||||| ||||||||||||||||    
T  10739155 cttcacaagtatatctttacatggcaatgtaggtcctatttatagtaggatacaaaagttgtaacttacatttacatgaagagtcatgagactaaatatc 10739056  T
Q  251 aataaagccatttaatcatactagttaagaaatatagaaggtctagggacaatggacatccacgtcatattttcatttattcataa 336  Q
    ||||||| |||||| ||||| |||||||  ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  10739055 aataaagtcatttagtcatagtagttaaagaatatagaaggtctagggacaatggacatccacataatattttcatttattcataa 10738970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 46 - 139
Target Start/End: Original strand, 1156308 - 1156401
Alignment:
Q  46 gtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttggtgctctaag 139  Q
    ||||||||||||| |||||||||| |||||||   ||||| ||||||||||||||||| ||||||||| |||| |||||||| | |||||||||    
T  1156308 gtttaaataattgggaagtgtgaaataatatattgtattacgtgagacccatttataccactcatatgggtggtatggatgtggatgctctaag 1156401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 17312881 - 17312981
Alignment:
Q  40 tgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatat-gagtggcatggatgttggtgctctaa 138  Q
    ||||| |||||||||||||| ||||||||||||||||||| |||||  |||||||||||||||| |  ||| | ||||||||||||||| ||||||||||    
T  17312881 tgagtggtttaaataattgaaaagtgtgaagtaatataaagtatta-ctgagacccatttataccatccatgtagagtggcatggatgtgggtgctctaa 17312979  T
Q  139 ga 140  Q
    ||    
T  17312980 ga 17312981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 18 - 138
Target Start/End: Complemental strand, 35158963 - 35158843
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtg 117  Q
    ||||||||||  ||||||||  ||||| ||||||||||||| |||||||  |||||||||| |||||| || |||| ||||||||| || ||||||||||    
T  35158963 atgaatatttagaaaatgtagttgagtggtttaaataattgggaagtgtccagtaatataatatattaagtcagactcatttataccacccatatgagtg 35158864  T
Q  118 gcatggatgttggtgctctaa 138  Q
      |||||||| | ||||||||    
T  35158863 atatggatgtggatgctctaa 35158843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 30 - 138
Target Start/End: Original strand, 9682379 - 9682487
Alignment:
Q  30 aaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatat-gagtggcatggatgtt 128  Q
    ||||||||  ||||| |||||||||||||| ||||||||||||||||||| |||||  || ||||||||||||| || ||| | |||||||||||||||     
T  9682379 aaaatgtagttgagtggtttaaataattgaaaagtgtgaagtaatataaagtatta-ctgggacccatttataccacccatgtagagtggcatggatgtg 9682477  T
Q  129 ggtgctctaa 138  Q
    ||| ||||||    
T  9682478 ggtcctctaa 9682487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 17909809 - 17909748
Alignment:
Q  275 ttaagaaatatagaaggtctagggacaatggacatccacgtcatattttcatttattcataa 336  Q
    ||||| || |||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  17909809 ttaaggaaaatagaagggctagggacaatggacatccacatcatattttcatttattcataa 17909748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 5191347 - 5191411
Alignment:
Q  11 gagtgagatgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaata 75  Q
    |||||| ||||||||||||||||||||| ||||| |||||| ||||||| |||||||||||||||    
T  5191347 gagtgatatgaatatttgaaaaatgtaattgagtagtttaagtaattgaaaagtgtgaagtaata 5191411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 259
Target Start/End: Complemental strand, 17703083 - 17702992
Alignment:
Q  168 ctttacatggcaatgtaggtcctatttataggatacaaaagttgtgtcttccaattacatgaagagccatgagactaaatatcaataaagcc 259  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| |  ||| ||| |||    |||||||||||||||||||||||| |||||    
T  17703083 ctttacatgacaatgtatgtcctatttataggatacaaaagttttaacttacaagtaccctcagagccatgagactaaatatcaatgaagcc 17702992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 140
Target Start/End: Original strand, 18227035 - 18227129
Alignment:
Q  46 gtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttggtgctctaaga 140  Q
    ||||||||||||| ||||||||| |||||||||  ||||| ||| ||||| ||||||| || || ||| ||||||||||||| | ||||||||||    
T  18227035 gtttaaataattgggaagtgtgaggtaatataatgtattatgtgggacccgtttataccacccaaatgggtggcatggatgtggatgctctaaga 18227129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 40278984 - 40279089
Alignment:
Q  30 aaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttg 129  Q
    ||||||||  ||||| |||||||||||||  |||| | ||||||||||| |||||| ||| | ||||||||||| |||||| || |||||||| |||| |    
T  40278984 aaaatgtagttgagtggtttaaataattggaaagtataaagtaatataatatattatgtgggtcccatttataccactcatttgggtggcatgaatgtgg 40279083  T
Q  130 gtgctc 135  Q
    ||||||    
T  40279084 gtgctc 40279089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 11425577 - 11425468
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtg 117  Q
    ||||||||||  ||||||||  ||||| | ||||||||||| ||||||| ||||||||||| |||||| |||   ||||||||||| |  ||| || |||    
T  11425577 atgaatatttagaaaatgtagttgagtcggttaaataattgggaagtgtaaagtaatataatatattatgtggatcccatttataccatccatttgggtg 11425478  T
Q  118 gcatggatgt 127  Q
    ||||||||||    
T  11425477 gcatggatgt 11425468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 37479211 - 37479319
Alignment:
Q  29 aaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgtt 128  Q
    |||||||||  ||||| |||||||||||||| |||| | ||||||||||| |||||| ||| ||  ||||||||| |  ||||| ||||||||||||||     
T  37479211 aaaaatgtagttgagtggtttaaataattgaaaagtttaaagtaatataatatattatgtg-gattcatttataccatccatataagtggcatggatgtg 37479309  T
Q  129 ggtgctctaa 138  Q
    | ||||||||    
T  37479310 gttgctctaa 37479319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 27594274 - 27594395
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatat-gagt 116  Q
    ||||||||||  ||||||||  ||||| |||||||||||||  | ||||||| |||||||||  |||| ||| ||||||||||| | || ||| | ||||    
T  27594274 atgaatatttagaaaatgtagttgagtggtttaaataattggaaggtgtgaaataatataaagaattacgtgggacccatttattccac-catgtagagt 27594372  T
Q  117 ggcatggatgttggtgctctaag 139  Q
    |||||||||||  ||||||||||    
T  27594373 ggcatggatgtgagtgctctaag 27594395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 138
Target Start/End: Complemental strand, 16577474 - 16577380
Alignment:
Q  44 ttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttat-actactcatatgagtggcatggatgttggtgctctaa 138  Q
    |||||||||||||||| || ||| || ||||||||  ||||   |||||||||||||| |||| ||||||||||||||||||  | ||||||||||    
T  16577474 ttgtttaaataattgaaaaatgtaaaataatataatgtattttatgagacccatttataacta-tcatatgagtggcatggacttaggtgctctaa 16577380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 7e-48; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 26023566 - 26023374
Alignment:
Q  154 cttctcaattatatctttacatggcaatgtaggtcctatttataggatacaaaagttgtgtcttccaattacatgaagagccatgagactaaatatc--- 250  Q
    |||||||  ||| |||||||||| |||||||||| ||||||||||||||||||||||||  ||| |||||| |||||||||||||||||||||||||       
T  26023566 cttctcatgtatgtctttacatgacaatgtaggttctatttataggatacaaaagttgtaacttacaattatatgaagagccatgagactaaatatcaat 26023467  T
Q  251 -------aataaagccatttaatcatactagttaagaaatatagaaggtctagggacaatggacatccacgtcatattttcatttattcataa 336  Q
           ||||||| |||||| ||||| |||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  26023466 aggaataaataaagtcatttagtcatagtagttaaggaatatagaaggtctagagacaatggacatccacatcatattttcatttattcataa 26023374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 26028776 - 26028689
Alignment:
Q  251 aataaagccatttaatcatactagttaagaaatatagaaggtctagggacaatggacatccacgtcatattttcatttattcataata 338  Q
    ||||||| |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26028776 aataaagtcatttagtcataatagttaaggaatatagaaggtctagggacaatggacatccacatcatattttcatttattcataata 26028689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 7168014 - 7168122
Alignment:
Q  28 gaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgt 127  Q
    ||||||||||  || || |||||||||||||  || ||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  7168014 gaaaaatgtagttgggtggtttaaataattggaaaatgtaaagtaatataaaatattatgtgagacccatttatactactcatatgggtgacatggatgt 7168113  T
Q  128 tggtgctct 136  Q
      |||||||    
T  7168114 gagtgctct 7168122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 47394462 - 47394371
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactca 109  Q
    |||||||||| ||||||||| | |||| ||||||||||||| |||||||||||||||||||  ||||| |||  ||||||||||||||||||    
T  47394462 atgaatatttaaaaaatgtagacgagtagtttaaataattgggaagtgtgaagtaatataatgtattatgtggaacccatttatactactca 47394371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 16679996 - 16679882
Alignment:
Q  22 atatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcat 121  Q
    ||||||||||||||||| ||| | ||| ||||||||||||||||||||||||||||| |||   ||||||  ||||| |||| || ||||||||||||||    
T  16679996 atatttgaaaaatgtaattgaatggttaaaataattgagaagtgtgaagtaatataatatacagggtgaggtccattgataccacccatatgagtggcat 16679897  T
Q  122 ggatgttggtgctct 136  Q
     ||||| | ||||||    
T  16679896 tgatgtggatgctct 16679882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 10574370 - 10574479
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtg 117  Q
    |||||||||| |||||| ||| |||||  |||||||||||||||| ||||||||||||||  |||||| |||  || ||||||||| ||| |||| ||||    
T  10574370 atgaatatttaaaaaatataattgagtgatttaaataattgagaaatgtgaagtaatatattatattatgtggaactcatttataccacttatattagtg 10574469  T
Q  118 gcatggatgt 127  Q
    ||||||||||    
T  10574470 gcatggatgt 10574479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 30 - 138
Target Start/End: Original strand, 46823651 - 46823759
Alignment:
Q  30 aaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatat-gagtggcatggatgtt 128  Q
    ||||||||  ||||| |||||||||||||| ||||||||||||||||||| |||||  || ||||||||||||| || ||| | |||||||||||||||     
T  46823651 aaaatgtagttgagtggtttaaataattgaaaagtgtgaagtaatataaagtatta-ctgggacccatttataccacccatgtagagtggcatggatgtg 46823749  T
Q  129 ggtgctctaa 138  Q
    ||||||||||    
T  46823750 ggtgctctaa 46823759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 23571018 - 23571132
Alignment:
Q  22 atatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcat 121  Q
    |||||| |||||| ||  ||||||||||||||||| || || |||||||||||||||  ||||| ||| ||||||||||||| || |||||| |||| ||    
T  23571018 atatttaaaaaatatagttgagttgtttaaataatggaaaaatgtgaagtaatataatgtattatgtgggacccatttataccacccatatgggtggtat 23571117  T
Q  122 ggatgttggtgctct 136  Q
    |||||  ||||||||    
T  23571118 ggatgcgggtgctct 23571132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 30 - 142
Target Start/End: Complemental strand, 7900234 - 7900122
Alignment:
Q  30 aaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttg 129  Q
    ||||||||  ||||| ||||||||||||| ||||| | ||||||||||| |||||| ||| | ||||||||||| |  ||| |  ||||||||||||| |    
T  7900234 aaaatgtagttgagtggtttaaataattgggaagtataaagtaatataatatattatgtgggtcccatttatacgatccatttaggtggcatggatgtgg 7900135  T
Q  130 gtgctctaagagt 142  Q
    |||||||||||||    
T  7900134 gtgctctaagagt 7900122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 43496484 - 43496368
Alignment:
Q  22 atatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcat 121  Q
    |||||| |||||||||  ||| | ||||||||||||||||||||||| |||||||||  ||||| ||| ||||| ||||||| |  || ||| |||||||    
T  43496484 atatttaaaaaatgtagttgaatagtttaaataattgagaagtgtgaggtaatataatgtattatgtgggacccgtttataccatccaaatgggtggcat 43496385  T
Q  122 ggatgttggtgctctaa 138  Q
    |||||| | ||||||||    
T  43496384 ggatgtggatgctctaa 43496368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 136
Target Start/End: Complemental strand, 51613333 - 51613226
Alignment:
Q  30 aaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatat-gagtggcatggatgtt 128  Q
    ||||||||  ||||| |||||||||||||  ||||||||||||||||||| ||||| ||| || |||||||||| |||||||| ||||| |||| ||||     
T  51613333 aaaatgtagttgagtggtttaaataattggaaagtgtgaagtaatataaattattatgtgggatccatttataccactcatatagagtgacatgaatgta 51613234  T
Q  129 ggtgctct 136  Q
    | ||||||    
T  51613233 gatgctct 51613226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 50428514 - 50428592
Alignment:
Q  47 tttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggat 125  Q
    ||||||||||||||||||||||||||||||||  ||||  |||||| |||||||||| || ||||||| || |||||||    
T  50428514 tttaaataattgagaagtgtgaagtaatataatttattgcgtgagatccatttataccacccatatgaatgacatggat 50428592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 1035807 - 1035717
Alignment:
Q  46 gtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttggtgctct 136  Q
    |||||||||||||||||||||||| |||||||   |||||  || ||||||| ||||| || ||||||||||| |||||||| | ||||||    
T  1035807 gtttaaataattgagaagtgtgaaataatatattgtattacatgggacccatatataccacccatatgagtggtatggatgtggatgctct 1035717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 336
Target Start/End: Original strand, 18188307 - 18188366
Alignment:
Q  273 agttaagaaatatagaaggtctagggacaatggacatccacgtcatattttcatttattcataa 336  Q
    ||||||| ||||||||||||||||||||||||    ||| | ||||||||||||||||||||||    
T  18188307 agttaaggaatatagaaggtctagggacaatg----tccccatcatattttcatttattcataa 18188366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 138
Target Start/End: Complemental strand, 37457692 - 37457594
Alignment:
Q  40 tgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttggtgctctaa 138  Q
    ||||| |||| ||||||||||||||||||| |||||||   ||||| ||| ||||||||||||| ||  ||||| ||||  ||||||| | ||||||||    
T  37457692 tgagtggttttaataattgagaagtgtgaaataatatattgtattacgtgggacccatttataccacctatatgggtggtgtggatgtggatgctctaa 37457594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 19993405 - 19993502
Alignment:
Q  40 tgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttggtgctcta 137  Q
    ||||| |||||||||||| | |||||| ||||||||||| |||||| |||   ||||| ||||| || ||| ||||| |||||||||| | |||||||    
T  19993405 tgagtggtttaaataattaaaaagtgtaaagtaatataatatattatgtggatcccatctataccacccatttgagttgcatggatgtggatgctcta 19993502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 145380 - 145442
Alignment:
Q  138 agagtgtattgtattgcttctcaattatatctttacatggcaatgtaggtcctatttatagga 200  Q
    ||||| || ||||||||||||||| | | || |||||| | ||||||||||||||||||||||    
T  145380 agagtatagtgtattgcttctcaagtgtgtcattacattgtaatgtaggtcctatttatagga 145442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 26707131 - 26707192
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaa 79  Q
    ||||||||||  ||||||||  ||| | |||||||||||||| ||||||||| |||||||||    
T  26707131 atgaatatttagaaaatgtagttgaatggtttaaataattgaaaagtgtgaactaatataaa 26707192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 93; Significance: 7e-45; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 167 - 336
Target Start/End: Complemental strand, 16257 - 16078
Alignment:
Q  167 tctttacatggcaatgtaggtcctatttataggatacaaaagttgtgtcttccaattacatgaagagccatgagactaaatatc----------aataaa 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||| ||||||||          ||||||    
T  16257 tctttacatggcaatgtaggtcctatttataggatacaaaagttgtaacttacaattacatgaagagccatgagagtaaatatcaatatgaataaataaa 16158  T
Q  257 gccatttaatcatactagttaagaaatatagaaggtctagggacaatggacatccacgtcatattttcatttattcataa 336  Q
    | |||||| ||||| |||||||  |||||||||||| ||| ||||||| |||||||| ||||||||||||||||||||||    
T  16157 gtcatttagtcatagtagttaaagaatatagaaggtatagagacaatgtacatccacatcatattttcatttattcataa 16078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 2e-42; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 167 - 336
Target Start/End: Original strand, 28663664 - 28663843
Alignment:
Q  167 tctttacatggcaatgtaggtcctatttataggatacaaaagttgtgtcttccaattacatgaagagccatgagactaaatatc----------aataaa 256  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||  |||  |||||||||||||||||||||||||||||||          ||||||    
T  28663664 tctttacatgacaatgtagatcctatttataggatacaaaagttgtaacttataattacatgaagagccatgagactaaatatcaataggaataaataaa 28663763  T
Q  257 gccatttaatcatactagttaagaaatatagaaggtctagggacaatggacatccacgtcatattttcatttattcataa 336  Q
    | |||||| ||| | |||||||| |||||||||||||| |||||||||||||||||  ||||||||||||||||||||||    
T  28663764 gtcatttagtcacaatagttaaggaatatagaaggtctggggacaatggacatccaaatcatattttcatttattcataa 28663843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 167 - 341
Target Start/End: Complemental strand, 19699528 - 19699340
Alignment:
Q  167 tctttacatggcaatgtaggtcctatttataggatacaaaagttgtgtcttccaattacatgaagag----ccatgagactaaatatcaata-------- 254  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||||  ||| || ||||||||||||    |||||||||||||||||||||            
T  19699528 tctttacatgacaatgtatgtcatatttataggatacaaaagttgtaacttacagttacatgaagagtcagccatgagactaaatatcaataggaataaa 19699429  T
Q  255 --aagccatttaatcatactagttaagaaatatagaaggtctagggacaatggacatccacgtcatattttcatttattcataatagtc 341  Q
      ||| |||||||||||| ||||||||  ||||| |||||||||||||||||| ||||||| |||||||| ||||||||||||| ||||    
T  19699428 taaaggcatttaatcatagtagttaagggatatataaggtctagggacaatggtcatccacatcatatttgcatttattcataacagtc 19699340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 273 - 338
Target Start/End: Complemental strand, 17935525 - 17935460
Alignment:
Q  273 agttaagaaatatagaaggtctagggacaatggacatccacgtcatattttcatttattcataata 338  Q
    ||||||| ||||||||||||||||  ||||||||||||| | ||||||||||||||||||||||||    
T  17935525 agttaaggaatatagaaggtctagaaacaatggacatccgcatcatattttcatttattcataata 17935460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 35205219 - 35205122
Alignment:
Q  40 tgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttggtgctcta 137  Q
    |||||||||||||||| || ||||||| ||||||||||| ||| || ||| ||||||||||||| ||  || || ||||||||||| | |||||||||    
T  35205219 tgagttgtttaaataactgggaagtgtaaagtaatataatataatatgtgggacccatttataccacctatttgggtggcatggatttgggtgctcta 35205122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 34769580 - 34769700
Alignment:
Q  22 atatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcat 121  Q
    |||||| |||||||||  ||| | ||||||||||||| ||||||||| |||||||||  ||||| ||| ||||| ||||||| || || |||  ||||||    
T  34769580 atatttaaaaaatgtagttgaatggtttaaataattgggaagtgtgaggtaatataatgtattatgtgggacccgtttataccacccaaatggatggcat 34769679  T
Q  122 ggatgttggtgctctaagagt 142  Q
    |||||| | |||||| |||||    
T  34769680 ggatgtggatgctcttagagt 34769700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 136
Target Start/End: Original strand, 9959336 - 9959442
Alignment:
Q  30 aaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatat-gagtggcatggatgtt 128  Q
    ||||||||  ||||| |||||||||||||  |||||||||||| |||||| ||||| ||| ||||||||||||| || ||| | ||||| |||||||||     
T  9959336 aaaatgtagttgagtagtttaaataattggaaagtgtgaagtagtataaagtattacgtg-gacccatttataccacccatgtagagtgacatggatgtg 9959434  T
Q  129 ggtgctct 136  Q
    ||||||||    
T  9959435 ggtgctct 9959442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 4925164 - 4925098
Alignment:
Q  11 gagtgagatgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatata 77  Q
    |||||| ||| |||||| |||||||||  ||||| |||||||||||||| |||||||||||||||||    
T  4925164 gagtgatatggatatttaaaaaatgtagttgagtggtttaaataattgaaaagtgtgaagtaatata 4925098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 39060294 - 39060193
Alignment:
Q  11 gagtgagatgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcat 110  Q
    |||||| ||| ||||||  ||||| ||  ||||| ||||||||||| || ||||||||||||||||||  ||||| ||| ||||||||||||| || |||    
T  39060294 gagtgatatggatatttagaaaatatagttgagtggtttaaataatcgaaaagtgtgaagtaatataatgtattatgtgggacccatttataccacccat 39060195  T
Q  111 at 112  Q
    ||    
T  39060194 at 39060193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 138
Target Start/End: Complemental strand, 10523922 - 10523802
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtg 117  Q
    ||||||||||  ||||||||| ||||| |||||||||||| | |||||| || ||||||||  ||||  ||| |  |||||||||| ||  ||||| |||    
T  10523922 atgaatatttagaaaatgtaagtgagtggtttaaataattaaaaagtgtaaaataatataatgtattgagtggggtccatttataccaccaatatgggtg 10523823  T
Q  118 gcatggatgttggtgctctaa 138  Q
     ||||||||| ||||||||||    
T  10523822 acatggatgtgggtgctctaa 10523802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 2907860 - 2907794
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatatt 84  Q
    |||||||||| ||||||| |  ||||||||||||||||||  ||| ||||||||||| |||||||||    
T  2907860 atgaatattttaaaaatgaagttgagttgtttaaataattaggaaatgtgaagtaatgtaaaatatt 2907794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 14593955 - 14593889
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatatt 84  Q
    ||||||||||  ||||||||| ||| | ||||||||||||||||  ||||||||||||||| |||||    
T  14593955 atgaatatttataaaatgtaattgaatggtttaaataattgagatttgtgaagtaatataatatatt 14593889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 14947746 - 14947689
Alignment:
Q  46 gtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatac 103  Q
    |||||||||||||| |||| | |||||||||||||||||| ||| || ||||||||||    
T  14947746 gtttaaataattgaaaagtataaagtaatataaaatattatgtgggatccatttatac 14947689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 35211940 - 35212037
Alignment:
Q  40 tgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttggtgctcta 137  Q
    ||||| |||||||||| || ||||||| ||||||||||| ||| || ||| ||||||||||||| ||  || || |||||||| |||| | |||||||    
T  35211940 tgagtggtttaaataactgggaagtgtaaagtaatataatataatatgtgggacccatttataccacctatttgggtggcatgaatgtggatgctcta 35212037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 37902402 - 37902510
Alignment:
Q  29 aaaaatgtaaatgagttgtttaaa-taattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgt 127  Q
    |||||||||  ||||| ||||||| || ||||||||||| ||||||||||| |||| | ||| | | ||||||||| ||  ||||| |||||||||||||    
T  37902402 aaaaatgtagttgagtagtttaaaatatttgagaagtgtaaagtaatataatatataatgtgggtctcatttataccaccaatatgggtggcatggatgt 37902501  T
Q  128 tggtgctct 136  Q
     | ||||||    
T  37902502 ggttgctct 37902510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 24213293 - 24213364
Alignment:
Q  136 taagagtgtattgtattgcttctcaattatat-ctttacatggcaatgtaggtcctatttataggatacaaa 206  Q
    ||||||||||||||||| |||| ||| ||| | ||||||||  |||| |||||||||||||||||| |||||    
T  24213293 taagagtgtattgtattacttcacaagtatgtactttacattacaatataggtcctatttataggacacaaa 24213364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 298 - 336
Target Start/End: Complemental strand, 17945788 - 17945750
Alignment:
Q  298 gacaatggacatccacgtcatattttcatttattcataa 336  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  17945788 gacaatggacatccacatcatattttcctttattcataa 17945750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 23089332 - 23089417
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatac 103  Q
    |||||||||| ||||||||  ||||||  ||||||||||||  || |||||| |||||||| ||||||  || || ||||||||||    
T  23089332 atgaatatttaaaaaatgtggatgagtgatttaaataattggaaaatgtgaaataatataatatattatatgggatccatttatac 23089417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 83
Target Start/End: Original strand, 34383734 - 34383771
Alignment:
Q  46 gtttaaataattgagaagtgtgaagtaatataaaatat 83  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  34383734 gtttaaataattgagaagtgtaaagtaatataatatat 34383771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 3e-38; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 136 - 336
Target Start/End: Complemental strand, 38419969 - 38419769
Alignment:
Q  136 taagagtgtattgtattgcttctcaattatatctttacatggcaatgtaggtcctatttataggatacaaaagttgtgtcttccaattacatgaagagcc 235  Q
    ||||||||| ||||||| |||| ||| | | |||||||||| |||||||  ||||||||||| ||||||||||||||  ||| |||||||||||||| ||    
T  38419969 taagagtgttttgtattacttcacaaatgtgtctttacatgacaatgtaactcctatttatacgatacaaaagttgtaacttacaattacatgaagaacc 38419870  T
Q  236 atgagactaaatatcaataaagccatttaatcatactag---ttaagaaatatagaaggtctagggacaatggacatccacgtcata-ttttcatttatt 331  Q
    |||||||||||||||||||||  ||||||||||||||||   ||||  |||||||||| |||||| |||||||| |||    ||||| ||||||||||||    
T  38419869 atgagactaaatatcaataaattcatttaatcatactagtaattaaagaatatagaagatctaggaacaatggatatc----tcatatttttcatttatt 38419774  T
Q  332 cataa 336  Q
    |||||    
T  38419773 cataa 38419769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 176 - 321
Target Start/End: Original strand, 7117140 - 7117295
Alignment:
Q  176 ggcaatgtaggtcctatttataggatacaaaagttgtgtcttccaattacatgaagagccatgagactaaatatc----------aataaagccatttaa 265  Q
    |||||||| ||||||||||||||||||||||||||||  ||| ||| ||||||||||  ||||||||||||||||          ||||||| ||||||     
T  7117140 ggcaatgttggtcctatttataggatacaaaagttgtaacttacaagtacatgaagaatcatgagactaaatatcaataagaatgaataaagacatttag 7117239  T
Q  266 tcatactagttaagaaatatagaaggtctagggacaatggacatccacgtcatatt 321  Q
    |||||  | |||||  ||||| |||||||||||| ||||||||||||| |||||||    
T  7117240 tcatagaaattaagggatataaaaggtctagggaaaatggacatccacatcatatt 7117295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 28939771 - 28939693
Alignment:
Q  11 gagtgagatgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtg 89  Q
    |||||| ||||||||||  ||||||||  ||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  28939771 gagtgatatgaatatttagaaaatgtagttgagtagtttaaataattgagaagtgtgaagtaatataatatattaggtg 28939693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 35424211 - 35424127
Alignment:
Q  30 aaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatga 114  Q
    ||||||||  ||||| |||||||||||||| || |||||||||||||||  ||||| ||||||||||||||||| ||||||||||    
T  35424211 aaaatgtagttgagtggtttaaataattgaaaaatgtgaagtaatataatgtattatgtgagacccatttataccactcatatga 35424127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 35496169 - 35496089
Alignment:
Q  47 tttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgt 127  Q
    |||||||||||||||||||||||||||||||| |||||| ||  ||||||||||||| ||||||||  |||||| ||||||    
T  35496169 tttaaataattgagaagtgtgaagtaatataatatattatgtaggacccatttataccactcatataggtggcaaggatgt 35496089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 49644375 - 49644471
Alignment:
Q  22 atatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtgg 118  Q
    ||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||| |||||| ||| |  ||||||| || || |||||| ||||    
T  49644375 atatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccacccatatgggtgg 49644471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 36177221 - 36177306
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatac 103  Q
    |||||||||| ||||||||| |||||| ||| |||||||||  ||||||||||||||||||  ||||| ||| |||||||||||||    
T  36177221 atgaatatttaaaaaatgtagatgagtggttcaaataattggaaagtgtgaagtaatataatctattatgtgggacccatttatac 36177306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 15877826 - 15877729
Alignment:
Q  40 tgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttggtgctcta 137  Q
    ||||| ||||||||||| || || |||||||||||||||  ||||| ||| ||||||||||||| || |||||| |||| |||||||  |||||||||    
T  15877826 tgagtggtttaaataatggaaaaatgtgaagtaatataatgtattatgtgggacccatttataccacccatatgggtggtatggatgggggtgctcta 15877729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 40793270 - 40793178
Alignment:
Q  11 gagtgagatgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatac 103  Q
    |||||| ||||||||||  ||||||||  ||||| |||||||||||||| ||||| ||||||||||||| ||||| |||  | ||||||||||    
T  40793270 gagtgatatgaatatttataaaatgtagttgagtggtttaaataattgaaaagtgagaagtaatataaagtattacgtggaatccatttatac 40793178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 1995639 - 1995582
Alignment:
Q  46 gtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatac 103  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||| |||||||||||||    
T  1995639 gtttaaataattgggaagtgtgaagtaatataatgtattatgtgggacccatttatac 1995582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 35846219 - 35846127
Alignment:
Q  46 gtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatat-gagtggcatggatgttggtgctctaa 138  Q
    |||||||||||||| |||||| || ||||||||| ||||| ||||||||||||||| | || ||| | ||||| ||||||||| ||||||||||    
T  35846219 gtttaaataattgaaaagtgtaaaataatataaagtattacgtgagacccatttattccac-catctagagtgacatggatgtgggtgctctaa 35846127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 7352575 - 7352666
Alignment:
Q  48 ttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttggtgctctaag 139  Q
    ||||||||||| ||||||||| |||||||||  ||||| ||| ||||| ||||||| || || ||| ||| ||||||||| | |||||||||    
T  7352575 ttaaataattgggaagtgtgaggtaatataatgtattatgtgggacccgtttataccacccaaatgggtgacatggatgtggatgctctaag 7352666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 11467298 - 11467231
Alignment:
Q  11 gagtgagatgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataa 78  Q
    |||||| ||| ||||||  ||||||||  ||| | |||||||||||||||||||||||||||||||||    
T  11467298 gagtgatatggatatttagaaaatgtagttgattggtttaaataattgagaagtgtgaagtaatataa 11467231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 45266909 - 45266975
Alignment:
Q  46 gtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatat 112  Q
    |||||||| ||||||||||||||| ||||||||  |||| |||| ||||||||||||| || |||||    
T  45266909 gtttaaatgattgagaagtgtgaaataatataatgtattcggtgtgacccatttataccacacatat 45266975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 10937450 - 10937381
Alignment:
Q  137 aagagtgtattgtattgcttctcaattatatctttacatggcaatgtaggtcctatttataggatacaaa 206  Q
    |||||| | |||||||||||||||| | | ||||||||| ||||| ||| |||||||||||||| |||||    
T  10937450 aagagtatgttgtattgcttctcaaatgtgtctttacattgcaatatagatcctatttataggacacaaa 10937381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 49787033 - 49786941
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcat 110  Q
    ||||||||||  ||||| ||  ||||| |||||||||||||||| ||  ||| |||||||| ||||||  |||| ||||||||||| ||||||    
T  49787033 atgaatatttataaaatatagttgagtggtttaaataattgagatgtaagaaataatataatatattatatgagtcccatttataccactcat 49786941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 138
Target Start/End: Complemental strand, 52313962 - 52313854
Alignment:
Q  30 aaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttg 129  Q
    ||||||||  ||||| |||||||||| |   |||||| |||||||||||  || || ||| | ||||||||||| || ||| || ||||||||||||| |    
T  52313962 aaaatgtagttgagtggtttaaataactagaaagtgtaaagtaatataatgtaatatgtgggtcccatttataccacccatttgggtggcatggatgtgg 52313863  T
Q  130 gtgctctaa 138  Q
    |||||||||    
T  52313862 gtgctctaa 52313854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 20809685 - 20809642
Alignment:
Q  42 agttgtttaaataattgagaagtgtgaagtaatataaaatatta 85  Q
    |||||||||||||||| | |||| ||||||||||||||||||||    
T  20809685 agttgtttaaataattaaaaagtatgaagtaatataaaatatta 20809642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 136
Target Start/End: Complemental strand, 53464372 - 53464266
Alignment:
Q  30 aaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttg 129  Q
    ||||||||  ||||| |||||||||| |   |||||| |||||||||||  || || ||| | ||||||||||| || ||| || ||||||||||||| |    
T  53464372 aaaatgtagttgagtggtttaaataactagaaagtgtaaagtaatataatgtaatatgtgggtcccatttataccacccatttgggtggcatggatgtgg 53464273  T
Q  130 gtgctct 136  Q
    |||||||    
T  53464272 gtgctct 53464266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 29096199 - 29096142
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaata 75  Q
    |||||||||| || ||||||  ||||| |||||||||||||| || ||||||||||||    
T  29096199 atgaatatttaaataatgtagttgagtggtttaaataattgaaaaatgtgaagtaata 29096142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 2e-33; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 168 - 341
Target Start/End: Original strand, 23599990 - 23600176
Alignment:
Q  168 ctttacatggcaatgtaggtcctatttataggatacaaaagttgtgtcttccaattacatgaagagccatgaga---ctaaatatcaata---------- 254  Q
    |||||||| | |||||||||||||||||||||||| |||||||||  ||| ||||||||||||||| |||||||   |||||||||||||              
T  23599990 ctttacatagtaatgtaggtcctatttataggatataaaagttgtaacttacaattacatgaagagtcatgagagtactaaatatcaataggaataaaca 23600089  T
Q  255 aagccatttaatcatactagttaagaaatatagaaggtctagggacaatggacatccacgtcatattttcatttattcataatagtc 341  Q
    ||| |||||| ||||| ||||||||  ||||||||||| ||||||||||||||||| || |||||||||||||||||||||| ||||    
T  23600090 aagtcatttagtcatagtagttaagggatatagaaggtttagggacaatggacatctacatcatattttcatttattcataacagtc 23600176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 144 - 255
Target Start/End: Original strand, 17275106 - 17275218
Alignment:
Q  144 tattgtattgcttctcaattatat-ctttacatggcaatgtaggtcctatttataggatacaaaagttgtgtcttccaattacatgaagagccatgagac 242  Q
    |||||||||||||||||| | | | |||||||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||| ||||||||    
T  17275106 tattgtattgcttctcaagtgtgttctttacatggcaatgtaggtcctatttatatgatacaaaagttgtaacttacaattacatgaagagtcatgagac 17275205  T
Q  243 taaatatcaataa 255  Q
    |||||||||||||    
T  17275206 taaatatcaataa 17275218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 168 - 321
Target Start/End: Complemental strand, 17190808 - 17190645
Alignment:
Q  168 ctttacatggcaatgtaggtcctatttataggatacaaaagttgtgtcttccaattacatgaagagccatgagactaaatatca----------ataaag 257  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||  ||| ||| || |||||||| |||| || |||||||||          ||||||    
T  17190808 ctttacatggcaatgtagatcctatttataggatgcaaaagttgtaacttacaagtatatgaagagtcatgggattaaatatcaataagaatgaataaag 17190709  T
Q  258 ccatttaatcatactagttaagaaatatagaaggtctagggacaatggacatccacgtcatatt 321  Q
     |||||| ||||| ||||||||  |||||||| ||||||||| ||||||||||||| |||||||    
T  17190708 tcatttagtcatagtagttaagggatatagaaagtctagggaaaatggacatccacatcatatt 17190645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 138 - 255
Target Start/End: Original strand, 17270165 - 17270289
Alignment:
Q  138 agagtgtattgtattgcttctcaattatat-ctttacatggcaatgtaggtcctat------ttataggatacaaaagttgtgtcttccaattacatgaa 230  Q
    ||||| |||||||||||||||||| | | | |||||||||||||||||||||||||      ||||||||||||||||||||  ||| ||||||||||||    
T  17270165 agagtatattgtattgcttctcaagtgtgttctttacatggcaatgtaggtcctatatctatttataggatacaaaagttgtaacttacaattacatgaa 17270264  T
Q  231 gagccatgagactaaatatcaataa 255  Q
    ||| ||| ||||||||| |||||||    
T  17270265 gagtcataagactaaatttcaataa 17270289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 10682508 - 10682636
Alignment:
Q  11 gagtgagatgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcat 110  Q
    |||||| ||| ||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||| |||||| ||| |  ||||||| || |  |||    
T  10682508 gagtgacatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccatccat 10682607  T
Q  111 atgagtggcatggatgttggtgctctaag 139  Q
    ||| |||| ||| |||| | |||||||||    
T  10682608 atgggtggaatgaatgtggatgctctaag 10682636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 2844143 - 2844247
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtg 117  Q
    |||||||||| |||||||||  ||||| ||||||||||||| |||||||||||||||||||  ||||| |||| || ||||||||| || |||||  |||    
T  2844143 atgaatatttaaaaaatgtagttgagtggtttaaataattgggaagtgtgaagtaatataatgtattatgtgaaactcatttataccacccatatcggtg 2844242  T
Q  118 gcatg 122  Q
    |||||    
T  2844243 gcatg 2844247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 11302321 - 11302235
Alignment:
Q  169 tttacatggcaatgtaggtcctatttataggatacaaaagttgtgtcttccaattacatgaagagccatgagactaaatatcaataa 255  Q
    ||||||||| |||||| |||||||||||||||||||||||||||   || |||||||||||||||| |||| |  ||||||||||||    
T  11302321 tttacatggtaatgtaagtcctatttataggatacaaaagttgtaatttacaattacatgaagagctatgaaataaaatatcaataa 11302235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 19763631 - 19763521
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatat-gagt 116  Q
    ||||||||||  ||||||||| | ||| |||||||||||||  ||||||||||||||||||||||||| ||| |||||| |||||| || ||| | ||||    
T  19763631 atgaatatttagaaaatgtaattaagtggtttaaataattggaaagtgtgaagtaatataaaatattacgtgggacccagttataccacccatgtagagt 19763532  T
Q  117 ggcatggatgt 127  Q
    ||||| |||||    
T  19763531 ggcatagatgt 19763521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 136
Target Start/End: Complemental strand, 19789328 - 19789202
Alignment:
Q  11 gagtgagatgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcat 110  Q
    |||||| ||||||||||  ||||||||| | |||  ||||||||||||| |||||||  |||||||||||||||| ||| |||||| |||||| || |||    
T  19789328 gagtgatatgaatatttagaaaatgtaattaagtgatttaaataattgaaaagtgtggcgtaatataaaatattacgtgggacccagttataccacccat 19789229  T
Q  111 at-gagtggcatggatgttggtgctct 136  Q
     | ||||| ||| ||||| ||||||||    
T  19789228 gtagagtgacatagatgtgggtgctct 19789202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 30775419 - 30775356
Alignment:
Q  40 tgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatac 103  Q
    ||||| |||||||||||||| ||||||||||||||||||  ||||| ||  |||||||||||||    
T  30775419 tgagtggtttaaataattgaaaagtgtgaagtaatataatgtattatgtaggacccatttatac 30775356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 31602219 - 31602164
Alignment:
Q  29 aaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatatt 84  Q
    |||||| ||| |||| | ||||||||||||||||||||||| ||||||||||||||    
T  31602219 aaaaatataattgagatatttaaataattgagaagtgtgaattaatataaaatatt 31602164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 298 - 336
Target Start/End: Complemental strand, 11302180 - 11302142
Alignment:
Q  298 gacaatggacatccacgtcatattttcatttattcataa 336  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  11302180 gacaatgaacatccacatcatattttcatttattcataa 11302142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 30349262 - 30349201
Alignment:
Q  23 tatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatatt 84  Q
    ||||| |||| | ||| ||| ||||||||||| ||||||||| ||||||||||||| |||||    
T  30349262 tatttcaaaattataattgaattgtttaaatatttgagaagtatgaagtaatataatatatt 30349201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 6e-33; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 28 - 140
Target Start/End: Original strand, 48252905 - 48253017
Alignment:
Q  28 gaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgt 127  Q
    ||||||||||  ||||| |||||||||||||  |||||||||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||||    
T  48252905 gaaaaatgtagttgagtggtttaaataattggaaagtgtgaagtaatataaaatattatatgggacccatttatactactcatatgggtggcatggatgt 48253004  T
Q  128 tggtgctctaaga 140  Q
     ||||||||||||    
T  48253005 gggtgctctaaga 48253017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 49080828 - 49080738
Alignment:
Q  46 gtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttggtgctct 136  Q
    |||||||||||||| |||||||||||||||||| |||||| || |||||||||||||| |||||||||  || ||||||||| ||||||||    
T  49080828 gtttaaataattgaaaagtgtgaagtaatataatatattatgtaagacccatttatacaactcatatggatgacatggatgtgggtgctct 49080738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 43692561 - 43692679
Alignment:
Q  21 aatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggca 120  Q
    ||||||| |||||| || |||||| |||||||||||||||||||||||| ||||||||  ||||| ||| |||| |||||||| | ||| |||||||| |    
T  43692561 aatatttaaaaaatttagatgagtggtttaaataattgagaagtgtgaaataatataatgtattatgtgggacctatttataccattcaaatgagtggta 43692660  T
Q  121 tggatgttggtgctctaag 139  Q
    || || | | |||||||||    
T  43692661 tgaatatggatgctctaag 43692679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 8404833 - 8404754
Alignment:
Q  22 atatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttat 101  Q
    |||||| |||||||||| ||||| |||||||||||||  ||||||||| ||||||||| ||||| ||| |||||||||||    
T  8404833 atatttaaaaaatgtaattgagtggtttaaataattggaaagtgtgaaataatataaagtattacgtgggacccatttat 8404754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 12879345 - 12879278
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatatta 85  Q
    ||||||||||  ||||| ||  || |||||||||||||||||||||||||||||||||||||||||||    
T  12879345 atgaatatttagaaaatatagttgtgttgtttaaataattgagaagtgtgaagtaatataaaatatta 12879278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 43598833 - 43598900
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatatta 85  Q
    ||||||||||||||||| ||  ||||| |||||||||||||||||||||||| |||||||| ||||||    
T  43598833 atgaatatttgaaaaatatagttgagtggtttaaataattgagaagtgtgaactaatataatatatta 43598900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 36725798 - 36725907
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtg 117  Q
    ||||||||||  ||| ||||  ||||| ||||||||||||||||||||| || |||||||||  |||| ||| || |||||||||| || ||| ||||||    
T  36725798 atgaatatttagaaattgtagttgagtggtttaaataattgagaagtgtaaaataatataaagaattaagtgggatccatttataccacccatgtgagtg 36725897  T
Q  118 gcatggatgt 127  Q
    | ||||||||    
T  36725898 gtatggatgt 36725907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 46700888 - 46700969
Alignment:
Q  46 gtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgt 127  Q
    |||||||||||||||||||||||| || ||||||  |||| |||||| |||||||||| |||||||||  || |||||||||    
T  46700888 gtttaaataattgagaagtgtgaaatagtataaagaattaagtgagagccatttatacaactcatatggatgacatggatgt 46700969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 44396395 - 44396513
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtg 117  Q
    ||||||||||  ||||||||  ||||| | ||||||||||| ||||||| ||||||||||| |||||| |||   ||||||||||| |  ||| || |||    
T  44396395 atgaatatttagaaaatgtagttgagtgggttaaataattgggaagtgtaaagtaatataatatattatgtggatcccatttataccatccatttgggtg 44396494  T
Q  118 gcatggatgttggtgctct 136  Q
    |||||||||| | ||||||    
T  44396495 gcatggatgtggttgctct 44396513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 32485520 - 32485439
Alignment:
Q  46 gtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgt 127  Q
    |||||||||||| ||||| ||||||||||||||  ||||| ||| |||||||| |||| ||  |||||||||| ||||||||    
T  32485520 gtttaaataattaagaagcgtgaagtaatataatgtattatgtgggacccattgataccaccgatatgagtggtatggatgt 32485439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 29681446 - 29681376
Alignment:
Q  71 taatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttggtgctctaagag 141  Q
    |||||||| |||||| ||||| | |||||||| |||| ||||| ||||||||||||| | |||||||||||    
T  29681446 taatataatatattatgtgagtctcatttataatacttatatgggtggcatggatgtagttgctctaagag 29681376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 22790519 - 22790438
Alignment:
Q  22 atatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatac 103  Q
    ||||| ||||||||||  ||| |||||||||||||||| ||| || || ||||| ||||||||  |||||| ||||||||||    
T  22790519 atattagaaaaatgtagttgaattgtttaaataattgaaaagcgtaaaataatacaaaatattgtgtgagatccatttatac 22790438  T

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Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 36118124 - 36118064
Alignment:
Q  18 atgaatatttgaaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataa 78  Q
    ||||||||||  ||||||||| ||||| ||||||||||| ||||||||| || ||||||||    
T  36118124 atgaatatttagaaaatgtaattgagtggtttaaataatagagaagtgttaaataatataa 36118064  T

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Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 40160371 - 40160415
Alignment:
Q  40 tgagttgtttaaataattgagaagtgtgaagtaatataaaatatt 84  Q
    |||||||||||||||||||||||| || ||||||||||| |||||    
T  40160371 tgagttgtttaaataattgagaagcgttaagtaatataatatatt 40160415  T

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Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 35339003 - 35339041
Alignment:
Q  167 tctttacatggcaatgtaggtcctatttataggatacaa 205  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  35339003 tctttacatgacaatgtagatcctatttataggatacaa 35339041  T

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Target: scaffold0110 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 13880 - 13770
Alignment:
Q  29 aaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgtt 128  Q
    ||||||||||  |||| ||||||||||||| ||||||| || |||||||  |||||| ||| ||||||||||||| || || ||| |||||||||||||     
T  13880 aaaaatgtaagagagtggtttaaataattgggaagtgtaaaataatatattatattatgtgggacccatttataccacccaaatgggtggcatggatgtg 13781  T
Q  129 ggtgctctaag 139  Q
    | |||||||||    
T  13780 gatgctctaag 13770  T

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Target: scaffold0110; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 21617 - 21507
Alignment:
Q  29 aaaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgtt 128  Q
    ||||||||||  |||| ||||||||||||| ||||||| || |||||||  |||||| ||| ||||||||||||| || || ||| |||||||||||||     
T  21617 aaaaatgtaagagagtggtttaaataattgggaagtgtaaaataatatattatattatgtgggacccatttataccacccaaatgggtggcatggatgtg 21518  T
Q  129 ggtgctctaag 139  Q
    | |||||||||    
T  21517 gatgctctaag 21507  T

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Target: scaffold0015 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 56607 - 56718
Alignment:
Q  30 aaaatgtaaatgagttgtttaaataattgagaagtgtgaagtaatataaaatattaggtgagacccatttatactactcatatgagtggcatggatgttg 129  Q
    ||||||||  ||||| ||||||||||||||||||||| ||||||||||| |||||| ||| | ||||||||||| |  ||| ||  |||||||||||| |    
T  56607 aaaatgtagttgagtggtttaaataattgagaagtgtaaagtaatataatatattatgtgggtcccatttataccatccatttggatggcatggatgtgg 56706  T
Q  130 gtgctctaagag 141  Q
     |||||| ||||    
T  56707 ttgctcttagag 56718  T

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Target: scaffold0081 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 310
Target Start/End: Complemental strand, 7850 - 7791
Alignment:
Q  251 aataaagccatttaatcatactagttaagaaatatagaaggtctagggacaatggacatc 310  Q
    |||||||||||||| |||||  |||||||  |||||||| ||||||||| ||||||||||    
T  7850 aataaagccatttactcataggagttaagggatatagaaagtctagggaaaatggacatc 7791  T

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