View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14251_low_10 (Length: 431)
Name: NF14251_low_10
Description: NF14251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14251_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 366; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 16 - 414
Target Start/End: Original strand, 4345049 - 4345445
Alignment:
| Q |
16 |
aatattaggatttgaattaatcaccgaagtgttaaaactcttgttggtaataattgaaaataaaaaggctagcagtatcgggtaca-tgatttgttgttg |
114 |
Q |
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| T |
4345049 |
aatattaggatttgaattaatcaccgaagtgttaaaactcttgttggtaat---tgaaaataaaaaggctagcagtatcgggtacagtgatttgttgttg |
4345145 |
T |
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| Q |
115 |
ttgtaatatttgggcacattcaaattcttattcttactcaaagtaggagtgatttttcatgttttgtcaacgccacgtacatttatctaattcttcaata |
214 |
Q |
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| T |
4345146 |
ttgtaatatttgggcacattcaaattcttattcttacccaaagtaggagtgatttttcatgttttgtcaacgccacgtacattcatctaattcttcaata |
4345245 |
T |
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| Q |
215 |
gtgtaagcttgttgaactttataaatacctaggtaaacctttatttttagttaatggcaaaaatatataaatatacctagctaaacctgtaaataaattt |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4345246 |
gtgtaagcttgttgaactttataaatacctaggtaaacctttatttttagttaatggcaaaaatatataaatatacctagctaaacctgtaaataaattt |
4345345 |
T |
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| Q |
315 |
gcggatataattgaatatatcttcaacagatataaggtattacataggtcatcatgcatgtcaagtcaagcttcctaatagacatattagaccttaaaaa |
414 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4345346 |
gcggatataattgaatatatcttcaatagatataaggtattacataggtcatcatgcatgtcaagtcaagcttcctaatagacatattagaccttaaaaa |
4345445 |
T |
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