View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14253_high_12 (Length: 242)
Name: NF14253_high_12
Description: NF14253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14253_high_12 |
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Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 4410930 - 4410706
Alignment:
| Q |
1 |
ccggaatagtttatctcatcaagattttcaaatgaaaatgttgcaatttgaacaagtatttcctgaattacagcaaggtatcttgatcctaatattgcag |
100 |
Q |
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| T |
4410930 |
ccggaatagtttatctcatcaagattttcaaatgaaaatgttgcaatttgaacaagtatttcctgaattacagcaaggtatcttgatcctaatattgcgg |
4410831 |
T |
|
| Q |
101 |
gcgaaaacttgacatgtttatcattccctaaactcatagaaagttccatactactacatgaggcttgttccaaacctgatcttgttccattcatgctatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4410830 |
gcgaaaacttgacatgtttatcattccctaaactcatagaaagttccatactactacatgaggcttgttccaaacctgatcttgttccattcatgctatg |
4410731 |
T |
|
| Q |
201 |
agttaagtctgaacaactaatctct |
225 |
Q |
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||||||||| ||||||||||||||| |
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| T |
4410730 |
agttaagtcagaacaactaatctct |
4410706 |
T |
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