View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14253_low_1 (Length: 710)

Name: NF14253_low_1
Description: NF14253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14253_low_1
NF14253_low_1
[»] chr3 (83 HSPs)
chr3 (372-692)||(1935839-1936163)
chr3 (486-691)||(1929626-1929829)
chr3 (187-294)||(30510168-30510275)
chr3 (190-301)||(36720384-36720495)
chr3 (194-301)||(2667869-2667976)
chr3 (207-298)||(32651403-32651494)
chr3 (187-301)||(53473365-53473479)
chr3 (228-301)||(52769945-52770018)
chr3 (190-294)||(31520574-31520678)
chr3 (190-301)||(10499071-10499182)
chr3 (190-265)||(47454615-47454690)
chr3 (190-301)||(51903840-51903951)
chr3 (191-301)||(45308864-45308974)
chr3 (212-301)||(10445101-10445190)
chr3 (190-266)||(2597217-2597293)
chr3 (194-301)||(4844473-4844580)
chr3 (194-301)||(4870169-4870276)
chr3 (194-293)||(32638952-32639051)
chr3 (190-279)||(37788449-37788538)
chr3 (190-279)||(53412948-53413037)
chr3 (190-301)||(8051217-8051328)
chr3 (194-301)||(8075089-8075196)
chr3 (187-301)||(13808847-13808961)
chr3 (190-280)||(14186651-14186740)
chr3 (204-301)||(14339627-14339724)
chr3 (194-267)||(21960558-21960631)
chr3 (190-301)||(4222144-4222255)
chr3 (195-262)||(12761520-12761587)
chr3 (230-301)||(23244984-23245055)
chr3 (190-279)||(27093345-27093434)
chr3 (210-279)||(40063642-40063711)
chr3 (228-301)||(49452914-49452986)
chr3 (190-263)||(53956387-53956460)
chr3 (185-301)||(16212934-16213050)
chr3 (229-301)||(20501738-20501809)
chr3 (211-279)||(27259185-27259253)
chr3 (190-301)||(5499369-5499480)
chr3 (194-301)||(8170679-8170786)
chr3 (190-281)||(16354874-16354965)
chr3 (194-301)||(16991549-16991656)
chr3 (214-301)||(44743817-44743904)
chr3 (211-301)||(11090127-11090217)
chr3 (190-279)||(28703388-28703477)
chr3 (236-301)||(29186498-29186563)
chr3 (203-268)||(29563916-29563981)
chr3 (190-279)||(30311309-30311398)
chr3 (190-299)||(31788935-31789043)
chr3 (190-279)||(53863852-53863940)
chr3 (229-301)||(478810-478881)
chr3 (210-294)||(28531027-28531111)
chr3 (190-294)||(30232333-30232437)
chr3 (190-294)||(31510687-31510791)
chr3 (205-301)||(44069776-44069872)
chr3 (229-301)||(45699890-45699962)
chr3 (210-294)||(47860779-47860862)
chr3 (225-301)||(54414254-54414329)
chr3 (190-301)||(54990706-54990816)
chr3 (228-279)||(3427537-3427588)
chr3 (210-301)||(8853761-8853852)
chr3 (190-237)||(10682969-10683016)
chr3 (191-294)||(13613413-13613511)
chr3 (187-265)||(17034988-17035064)
chr3 (190-241)||(18316520-18316571)
chr3 (228-279)||(33899655-33899706)
chr3 (190-265)||(40268492-40268566)
chr3 (190-241)||(42799769-42799820)
chr3 (210-265)||(43902360-43902415)
chr3 (190-301)||(47810707-47810817)
chr3 (190-280)||(8390640-8390730)
chr3 (195-261)||(11612307-11612373)
chr3 (205-299)||(19716215-19716309)
chr3 (228-294)||(33861703-33861769)
chr3 (190-268)||(46518631-46518709)
chr3 (197-294)||(7673279-7673376)
chr3 (208-301)||(15048023-15048116)
chr3 (194-243)||(17554778-17554827)
chr3 (210-279)||(19154654-19154723)
chr3 (190-263)||(34844374-34844446)
chr3 (192-301)||(34928903-34929012)
chr3 (228-301)||(38550366-38550439)
chr3 (190-279)||(40777017-40777104)
chr3 (204-265)||(47236969-47237030)
chr3 (209-262)||(47279405-47279458)
[»] chr4 (74 HSPs)
chr4 (190-301)||(51948483-51948594)
chr4 (191-301)||(13901746-13901856)
chr4 (192-301)||(21660106-21660215)
chr4 (192-301)||(21668870-21668979)
chr4 (190-294)||(4185096-4185200)
chr4 (209-301)||(7949416-7949508)
chr4 (190-301)||(27965465-27965583)
chr4 (190-301)||(8030166-8030277)
chr4 (190-301)||(8306488-8306599)
chr4 (190-301)||(28635699-28635810)
chr4 (190-279)||(7292782-7292871)
chr4 (190-279)||(37109335-37109424)
chr4 (211-301)||(23377980-23378070)
chr4 (212-301)||(37274421-37274510)
chr4 (228-301)||(41047518-41047590)
chr4 (191-267)||(24234649-24234725)
chr4 (190-294)||(39509073-39509177)
chr4 (189-301)||(49576856-49576968)
chr4 (185-265)||(55427198-55427278)
chr4 (207-294)||(13015447-13015534)
chr4 (190-265)||(19238575-19238650)
chr4 (190-301)||(31826612-31826723)
chr4 (234-301)||(32662801-32662868)
chr4 (190-301)||(51250484-51250595)
chr4 (190-279)||(29195098-29195186)
chr4 (192-301)||(33755968-33756077)
chr4 (213-301)||(32992638-32992726)
chr4 (190-294)||(46545714-46545818)
chr4 (229-301)||(47386753-47386825)
chr4 (190-301)||(37720176-37720287)
chr4 (205-259)||(17618299-17618353)
chr4 (208-294)||(19531971-19532057)
chr4 (190-264)||(31759657-31759731)
chr4 (229-298)||(15729524-15729593)
chr4 (228-301)||(40285664-40285737)
chr4 (212-280)||(2622378-2622446)
chr4 (191-279)||(37980132-37980219)
chr4 (207-279)||(38869788-38869860)
chr4 (234-301)||(9693460-9693527)
chr4 (191-294)||(43623413-43623516)
chr4 (190-265)||(46295100-46295175)
chr4 (207-294)||(49262653-49262740)
chr4 (247-301)||(18525420-18525474)
chr4 (188-266)||(30557267-30557344)
chr4 (207-265)||(30938217-30938275)
chr4 (190-294)||(37443705-37443806)
chr4 (187-277)||(52254390-52254480)
chr4 (191-240)||(4911255-4911304)
chr4 (190-279)||(5795393-5795482)
chr4 (190-279)||(8325363-8325452)
chr4 (245-294)||(22096577-22096626)
chr4 (228-301)||(27104990-27105063)
chr4 (253-301)||(3606984-3607032)
chr4 (190-266)||(33619209-33619285)
chr4 (205-301)||(51954132-51954228)
chr4 (203-294)||(4688579-4688670)
chr4 (194-301)||(12793873-12793980)
chr4 (194-265)||(19229206-19229276)
chr4 (190-281)||(19680770-19680861)
chr4 (190-265)||(20608925-20609000)
chr4 (190-289)||(21344820-21344918)
chr4 (234-301)||(43124667-43124734)
chr4 (190-265)||(47044720-47044795)
chr4 (194-301)||(47230523-47230629)
chr4 (190-260)||(9241028-9241098)
chr4 (190-268)||(12798687-12798765)
chr4 (229-299)||(21375819-21375889)
chr4 (195-301)||(34075516-34075621)
chr4 (190-264)||(41346962-41347036)
chr4 (223-301)||(51622521-51622599)
chr4 (207-268)||(10048000-10048061)
chr4 (193-294)||(13215091-13215192)
chr4 (208-265)||(19112929-19112986)
chr4 (228-301)||(51969058-51969131)
[»] chr1 (82 HSPs)
chr1 (190-294)||(2219975-2220079)
chr1 (194-301)||(11068805-11068912)
chr1 (190-301)||(40257402-40257513)
chr1 (191-301)||(24047064-24047174)
chr1 (207-301)||(25494031-25494125)
chr1 (227-294)||(40814377-40814444)
chr1 (190-301)||(44961768-44961879)
chr1 (207-301)||(52336736-52336830)
chr1 (191-280)||(17745239-17745328)
chr1 (208-301)||(27476733-27476826)
chr1 (192-264)||(37400279-37400351)
chr1 (190-301)||(50901584-50901695)
chr1 (190-301)||(1094528-1094639)
chr1 (194-301)||(6122801-6122908)
chr1 (190-301)||(16893397-16893508)
chr1 (190-301)||(31794226-31794337)
chr1 (190-301)||(33700735-33700846)
chr1 (190-301)||(44126398-44126509)
chr1 (183-265)||(19528325-19528407)
chr1 (190-279)||(15786304-15786393)
chr1 (192-301)||(21547442-21547551)
chr1 (206-266)||(31383795-31383855)
chr1 (190-301)||(19940834-19940945)
chr1 (194-301)||(52116743-52116850)
chr1 (190-260)||(1690080-1690150)
chr1 (207-301)||(36124853-36124947)
chr1 (223-301)||(42949254-42949332)
chr1 (190-279)||(9165179-9165268)
chr1 (204-301)||(28411347-28411444)
chr1 (217-301)||(3799936-3800020)
chr1 (189-301)||(17410233-17410345)
chr1 (187-251)||(26232398-26232462)
chr1 (205-301)||(42983336-42983432)
chr1 (190-281)||(4566551-4566642)
chr1 (194-301)||(10526830-10526937)
chr1 (194-301)||(11063563-11063670)
chr1 (202-301)||(12587285-12587383)
chr1 (190-301)||(18037575-18037686)
chr1 (190-281)||(30689015-30689106)
chr1 (216-294)||(12370192-12370270)
chr1 (190-268)||(36371473-36371551)
chr1 (188-301)||(6948039-6948152)
chr1 (207-279)||(2799882-2799954)
chr1 (207-279)||(8177166-8177238)
chr1 (191-267)||(9224779-9224855)
chr1 (205-301)||(9879456-9879552)
chr1 (228-280)||(17439958-17440010)
chr1 (190-301)||(18459193-18459305)
chr1 (229-301)||(28283573-28283645)
chr1 (190-294)||(51814497-51814601)
chr1 (211-290)||(31049637-31049716)
chr1 (190-241)||(37046988-37047039)
chr1 (247-294)||(42858606-42858653)
chr1 (194-281)||(51703786-51703873)
chr1 (206-265)||(52029935-52029994)
chr1 (191-265)||(4824975-4825049)
chr1 (229-279)||(8904456-8904506)
chr1 (192-298)||(12662287-12662393)
chr1 (207-301)||(50919974-50920068)
chr1 (190-299)||(952514-952623)
chr1 (228-301)||(1600254-1600327)
chr1 (207-280)||(6650615-6650688)
chr1 (185-264)||(21694444-21694520)
chr1 (208-265)||(31605846-31605903)
chr1 (232-301)||(44370842-44370911)
chr1 (208-264)||(9117140-9117196)
chr1 (185-265)||(16169976-16170056)
chr1 (190-301)||(29056380-29056492)
chr1 (190-254)||(45235388-45235452)
chr1 (187-243)||(47720830-47720886)
chr1 (187-243)||(47727822-47727878)
chr1 (190-241)||(15581163-15581214)
chr1 (190-301)||(25297775-25297886)
chr1 (229-272)||(26232352-26232395)
chr1 (207-301)||(14787298-14787392)
chr1 (208-294)||(43445984-43446070)
chr1 (233-262)||(1205426-1205455)
chr1 (228-301)||(7743287-7743360)
chr1 (228-265)||(12259301-12259338)
chr1 (228-297)||(16040469-16040538)
chr1 (207-260)||(21184391-21184444)
chr1 (197-250)||(28022138-28022191)
[»] scaffold0258 (1 HSPs)
scaffold0258 (190-301)||(15285-15396)
[»] chr7 (86 HSPs)
chr7 (185-301)||(23301564-23301680)
chr7 (185-301)||(20335793-20335909)
chr7 (197-301)||(45228987-45229091)
chr7 (190-301)||(2446311-2446422)
chr7 (189-301)||(15905636-15905747)
chr7 (237-301)||(41975937-41976001)
chr7 (190-301)||(26459372-26459483)
chr7 (190-301)||(30579338-30579449)
chr7 (190-301)||(48771941-48772052)
chr7 (190-268)||(43215187-43215265)
chr7 (228-301)||(7309397-7309469)
chr7 (190-265)||(22760866-22760941)
chr7 (190-301)||(25590614-25590725)
chr7 (194-301)||(43590914-43591021)
chr7 (190-280)||(23552121-23552211)
chr7 (187-301)||(45976885-45976999)
chr7 (192-301)||(41519227-41519335)
chr7 (190-294)||(15137556-15137660)
chr7 (225-301)||(37473652-37473728)
chr7 (190-301)||(24513800-24513911)
chr7 (191-294)||(42711962-42712065)
chr7 (207-301)||(7721389-7721483)
chr7 (187-265)||(18884403-18884481)
chr7 (207-301)||(24438209-24438303)
chr7 (213-294)||(5934147-5934228)
chr7 (233-294)||(9122117-9122178)
chr7 (204-301)||(11720922-11721019)
chr7 (190-279)||(17040996-17041085)
chr7 (190-298)||(39499686-39499792)
chr7 (190-279)||(39631847-39631936)
chr7 (229-301)||(2495798-2495870)
chr7 (190-298)||(7801183-7801291)
chr7 (213-301)||(22035424-22035512)
chr7 (190-301)||(33460384-33460496)
chr7 (205-301)||(37085511-37085607)
chr7 (230-301)||(30217922-30217993)
chr7 (207-301)||(21877828-21877922)
chr7 (187-301)||(43663057-43663171)
chr7 (208-301)||(5668533-5668626)
chr7 (202-279)||(9608613-9608690)
chr7 (202-279)||(9836185-9836262)
chr7 (190-279)||(33869429-33869518)
chr7 (205-301)||(21558146-21558242)
chr7 (207-279)||(33222390-33222462)
chr7 (190-242)||(48125195-48125247)
chr7 (190-301)||(3280448-3280558)
chr7 (190-253)||(5579244-5579307)
chr7 (190-265)||(18056773-18056848)
chr7 (206-265)||(25132376-25132435)
chr7 (184-279)||(31835189-31835284)
chr7 (194-301)||(33181172-33181279)
chr7 (190-301)||(44628146-44628256)
chr7 (246-301)||(48983695-48983750)
chr7 (192-258)||(28236586-28236652)
chr7 (190-271)||(18363699-18363780)
chr7 (190-243)||(25021355-25021408)
chr7 (190-299)||(38374563-38374672)
chr7 (190-301)||(41487365-41487473)
chr7 (194-294)||(5830572-5830672)
chr7 (193-265)||(19553460-19553531)
chr7 (187-243)||(20952169-20952225)
chr7 (191-243)||(23595733-23595785)
chr7 (232-280)||(23945906-23945954)
chr7 (190-266)||(30442491-30442567)
chr7 (187-294)||(4566398-4566504)
chr7 (190-301)||(5273552-5273663)
chr7 (205-264)||(8108599-8108658)
chr7 (207-294)||(11700185-11700271)
chr7 (187-262)||(11765036-11765111)
chr7 (226-301)||(16355758-16355833)
chr7 (250-301)||(24046588-24046639)
chr7 (223-289)||(2882986-2883052)
chr7 (228-294)||(9183160-9183226)
chr7 (203-301)||(16708417-16708515)
chr7 (210-268)||(17113818-17113876)
chr7 (203-301)||(17682653-17682751)
chr7 (229-279)||(21570016-21570066)
chr7 (259-301)||(34647603-34647645)
chr7 (190-280)||(38917098-38917186)
chr7 (185-279)||(48039631-48039725)
chr7 (228-301)||(279916-279989)
chr7 (228-301)||(3174968-3175041)
chr7 (187-264)||(25241996-25242073)
chr7 (190-279)||(29385727-29385816)
chr7 (190-243)||(42836021-42836074)
chr7 (194-267)||(45709704-45709777)
[»] chr6 (51 HSPs)
chr6 (190-301)||(33549107-33549218)
chr6 (190-301)||(12234469-12234580)
chr6 (190-279)||(12188287-12188376)
chr6 (194-301)||(21418477-21418584)
chr6 (207-294)||(28841434-28841521)
chr6 (190-301)||(31622953-31623064)
chr6 (187-301)||(13441050-13441171)
chr6 (190-301)||(6758384-6758495)
chr6 (191-294)||(10338143-10338246)
chr6 (191-279)||(6776591-6776679)
chr6 (190-301)||(12633012-12633123)
chr6 (190-301)||(32613102-32613213)
chr6 (207-301)||(346551-346644)
chr6 (207-301)||(3715472-3715566)
chr6 (207-301)||(20213061-20213155)
chr6 (207-301)||(22107084-22107178)
chr6 (190-264)||(30127403-30127477)
chr6 (187-279)||(4105048-4105143)
chr6 (206-301)||(6385881-6385976)
chr6 (230-301)||(11103397-11103468)
chr6 (196-291)||(12216753-12216848)
chr6 (190-301)||(13227120-13227231)
chr6 (190-265)||(14557965-14558040)
chr6 (207-301)||(28363957-28364051)
chr6 (193-294)||(11423572-11423673)
chr6 (205-301)||(24641152-24641248)
chr6 (205-301)||(32201847-32201943)
chr6 (230-301)||(2616519-2616590)
chr6 (194-301)||(14199909-14200016)
chr6 (190-265)||(33560382-33560457)
chr6 (187-301)||(8268638-8268752)
chr6 (221-299)||(17736740-17736818)
chr6 (228-301)||(2484761-2484834)
chr6 (210-267)||(34786450-34786507)
chr6 (185-301)||(3779337-3779453)
chr6 (193-265)||(34444809-34444881)
chr6 (190-301)||(1056647-1056758)
chr6 (225-276)||(9626070-9626121)
chr6 (255-301)||(1992209-1992255)
chr6 (239-301)||(18263892-18263954)
chr6 (205-279)||(20863393-20863467)
chr6 (246-280)||(24256805-24256839)
chr6 (236-301)||(8597709-8597774)
chr6 (229-294)||(9875245-9875310)
chr6 (191-220)||(11854726-11854755)
chr6 (209-266)||(13113958-13114015)
chr6 (183-268)||(15951297-15951382)
chr6 (211-280)||(16405109-16405178)
chr6 (228-301)||(18562600-18562673)
chr6 (245-290)||(21148612-21148657)
chr6 (191-268)||(24617083-24617159)
[»] chr5 (48 HSPs)
chr5 (190-301)||(16773810-16773921)
chr5 (190-301)||(29075784-29075895)
chr5 (190-279)||(21549121-21549210)
chr5 (190-279)||(30883182-30883271)
chr5 (190-263)||(30109308-30109381)
chr5 (190-301)||(8278237-8278348)
chr5 (190-301)||(17028226-17028337)
chr5 (190-301)||(21589291-21589402)
chr5 (190-279)||(25627060-25627149)
chr5 (190-279)||(34984809-34984898)
chr5 (194-301)||(14495767-14495874)
chr5 (207-294)||(22020831-22020918)
chr5 (226-301)||(29173529-29173604)
chr5 (207-294)||(43442216-43442303)
chr5 (194-278)||(1410645-1410728)
chr5 (207-279)||(37258350-37258422)
chr5 (190-265)||(16457813-16457888)
chr5 (226-301)||(29210397-29210472)
chr5 (191-301)||(16436622-16436730)
chr5 (190-279)||(14285164-14285253)
chr5 (190-279)||(18595985-18596074)
chr5 (187-298)||(18437085-18437196)
chr5 (190-301)||(22737085-22737196)
chr5 (230-301)||(27840981-27841052)
chr5 (191-266)||(43241679-43241754)
chr5 (230-300)||(1279034-1279104)
chr5 (187-301)||(21086714-21086828)
chr5 (190-299)||(87388-87496)
chr5 (190-279)||(7918453-7918542)
chr5 (190-279)||(26078035-26078124)
chr5 (228-301)||(30000157-30000230)
chr5 (191-267)||(12883844-12883920)
chr5 (194-301)||(17155831-17155936)
chr5 (229-301)||(43230736-43230808)
chr5 (214-265)||(84851-84902)
chr5 (192-294)||(5596181-5596284)
chr5 (190-265)||(16172982-16173056)
chr5 (255-290)||(21236464-21236499)
chr5 (190-269)||(36958116-36958195)
chr5 (190-301)||(40461576-40461686)
chr5 (232-294)||(12669517-12669579)
chr5 (211-301)||(28285276-28285366)
chr5 (207-264)||(4963983-4964040)
chr5 (248-301)||(11352044-11352097)
chr5 (228-301)||(18206608-18206681)
chr5 (192-301)||(19949578-19949686)
chr5 (228-301)||(25979211-25979284)
chr5 (194-243)||(29692406-29692455)
[»] chr8 (64 HSPs)
chr8 (190-298)||(19703452-19703560)
chr8 (190-301)||(968365-968476)
chr8 (190-301)||(16852343-16852454)
chr8 (198-301)||(40791857-40791960)
chr8 (184-301)||(34986099-34986211)
chr8 (185-301)||(29431009-29431125)
chr8 (190-301)||(8485002-8485113)
chr8 (190-301)||(31087220-31087331)
chr8 (207-301)||(6536540-6536634)
chr8 (190-299)||(35641865-35641974)
chr8 (190-294)||(23361618-23361722)
chr8 (194-301)||(11819783-11819890)
chr8 (194-301)||(27750737-27750844)
chr8 (190-301)||(44780076-44780187)
chr8 (184-301)||(26688862-26688979)
chr8 (190-294)||(3624583-3624686)
chr8 (205-301)||(15948011-15948107)
chr8 (190-301)||(18540301-18540412)
chr8 (190-301)||(23874345-23874455)
chr8 (190-265)||(28783063-28783138)
chr8 (230-301)||(33727835-33727906)
chr8 (211-294)||(43594287-43594370)
chr8 (190-301)||(43968960-43969071)
chr8 (190-263)||(29858049-29858122)
chr8 (207-292)||(35690035-35690120)
chr8 (209-301)||(11492035-11492127)
chr8 (217-301)||(27979187-27979271)
chr8 (217-301)||(28036456-28036540)
chr8 (182-301)||(30483846-30483965)
chr8 (187-301)||(36205195-36205307)
chr8 (190-268)||(6436550-6436628)
chr8 (187-301)||(34966812-34966926)
chr8 (190-279)||(6569755-6569844)
chr8 (196-281)||(12281503-12281588)
chr8 (190-294)||(2203495-2203599)
chr8 (255-299)||(3129828-3129872)
chr8 (190-294)||(5801050-5801153)
chr8 (237-301)||(7347887-7347951)
chr8 (229-301)||(31408084-31408156)
chr8 (190-241)||(6530810-6530861)
chr8 (210-300)||(3305151-3305241)
chr8 (204-301)||(7140726-7140822)
chr8 (185-301)||(20994419-20994536)
chr8 (190-279)||(33017217-33017306)
chr8 (229-301)||(24351690-24351762)
chr8 (191-251)||(33692315-33692374)
chr8 (190-253)||(5264547-5264610)
chr8 (230-301)||(11928693-11928764)
chr8 (182-265)||(18546360-18546443)
chr8 (214-301)||(27871695-27871782)
chr8 (187-294)||(28560607-28560713)
chr8 (194-301)||(35826318-35826425)
chr8 (246-301)||(36034483-36034538)
chr8 (207-281)||(8794327-8794401)
chr8 (190-264)||(11793520-11793594)
chr8 (194-260)||(18030187-18030253)
chr8 (190-264)||(18897169-18897243)
chr8 (203-301)||(30774698-30774796)
chr8 (255-301)||(44595817-44595863)
chr8 (196-301)||(10287484-10287589)
chr8 (190-279)||(12988431-12988520)
chr8 (228-289)||(16843768-16843829)
chr8 (190-267)||(22268930-22269006)
chr8 (190-267)||(35287719-35287796)
[»] scaffold0074 (1 HSPs)
scaffold0074 (210-301)||(45721-45812)
[»] chr2 (66 HSPs)
chr2 (190-301)||(7798998-7799108)
chr2 (190-301)||(19016034-19016145)
chr2 (182-301)||(7667431-7667550)
chr2 (194-301)||(8162027-8162134)
chr2 (190-301)||(35710394-35710505)
chr2 (195-265)||(21213777-21213847)
chr2 (229-301)||(33582015-33582087)
chr2 (191-294)||(3001383-3001486)
chr2 (194-301)||(21195638-21195745)
chr2 (190-301)||(29503274-29503384)
chr2 (190-301)||(37755933-37756044)
chr2 (186-301)||(41504898-41505012)
chr2 (190-294)||(19244112-19244216)
chr2 (190-298)||(29197341-29197449)
chr2 (190-294)||(39714995-39715099)
chr2 (190-266)||(42327392-42327468)
chr2 (207-298)||(11251107-11251198)
chr2 (190-265)||(37480078-37480153)
chr2 (193-263)||(12994376-12994446)
chr2 (231-301)||(13519014-13519084)
chr2 (190-279)||(19322771-19322860)
chr2 (190-279)||(40416374-40416463)
chr2 (190-294)||(23052492-23052596)
chr2 (207-279)||(30410533-30410605)
chr2 (190-301)||(1435067-1435177)
chr2 (190-301)||(42602557-42602668)
chr2 (204-263)||(42860365-42860424)
chr2 (194-268)||(13803502-13803576)
chr2 (191-281)||(24191842-24191932)
chr2 (203-301)||(31573603-31573701)
chr2 (190-279)||(42922417-42922507)
chr2 (204-301)||(12086091-12086188)
chr2 (187-264)||(32687481-32687558)
chr2 (205-301)||(3677315-3677411)
chr2 (190-266)||(26545843-26545919)
chr2 (190-262)||(28846694-28846766)
chr2 (242-294)||(39764988-39765040)
chr2 (190-262)||(41908639-41908711)
chr2 (190-293)||(26482096-26482198)
chr2 (190-300)||(30359657-30359766)
chr2 (190-279)||(1729819-1729908)
chr2 (185-301)||(2295907-2296026)
chr2 (190-279)||(4060198-4060287)
chr2 (205-266)||(7599978-7600039)
chr2 (190-279)||(11062363-11062452)
chr2 (204-301)||(18259747-18259844)
chr2 (228-301)||(25637192-25637265)
chr2 (229-301)||(3660970-3661042)
chr2 (211-267)||(4262298-4262354)
chr2 (207-279)||(17737608-17737680)
chr2 (190-262)||(18825344-18825415)
chr2 (190-266)||(30808644-30808720)
chr2 (190-241)||(3697421-3697472)
chr2 (222-301)||(27244343-27244422)
chr2 (230-293)||(33569828-33569891)
chr2 (191-265)||(4683211-4683285)
chr2 (190-268)||(16918573-16918651)
chr2 (207-301)||(23230567-23230661)
chr2 (187-301)||(33962746-33962860)
chr2 (185-293)||(2311719-2311830)
chr2 (230-279)||(2750610-2750659)
chr2 (229-294)||(7918171-7918236)
chr2 (190-279)||(14500280-14500369)
chr2 (228-301)||(21303956-21304029)
chr2 (194-295)||(41202257-41202358)
chr2 (226-279)||(45026782-45026835)
[»] scaffold0070 (1 HSPs)
scaffold0070 (187-285)||(38880-38978)
[»] scaffold0517 (1 HSPs)
scaffold0517 (192-264)||(7725-7797)
[»] scaffold0299 (1 HSPs)
scaffold0299 (204-279)||(11545-11620)
[»] scaffold0101 (1 HSPs)
scaffold0101 (205-298)||(43297-43390)
[»] scaffold0368 (1 HSPs)
scaffold0368 (223-301)||(14927-15005)
[»] scaffold0126 (1 HSPs)
scaffold0126 (207-301)||(25309-25403)
[»] scaffold0118 (1 HSPs)
scaffold0118 (190-294)||(41602-41706)
[»] scaffold0032 (1 HSPs)
scaffold0032 (185-301)||(112280-112396)
[»] scaffold0009 (1 HSPs)
scaffold0009 (208-264)||(19846-19902)
[»] scaffold0008 (1 HSPs)
scaffold0008 (229-301)||(49348-49420)
[»] scaffold1367 (1 HSPs)
scaffold1367 (204-271)||(832-899)
[»] scaffold0211 (1 HSPs)
scaffold0211 (190-301)||(24056-24167)
[»] scaffold0006 (1 HSPs)
scaffold0006 (194-301)||(162971-163078)
[»] scaffold0002 (1 HSPs)
scaffold0002 (190-281)||(94953-95044)
[»] scaffold0194 (1 HSPs)
scaffold0194 (205-267)||(13042-13104)
[»] scaffold0115 (1 HSPs)
scaffold0115 (208-301)||(42626-42719)
[»] scaffold0180 (1 HSPs)
scaffold0180 (207-279)||(19946-20018)
[»] scaffold0238 (2 HSPs)
scaffold0238 (226-301)||(2673-2748)
scaffold0238 (190-301)||(5196-5307)
[»] scaffold0221 (1 HSPs)
scaffold0221 (190-265)||(2907-2982)
[»] scaffold0122 (1 HSPs)
scaffold0122 (184-301)||(6884-6998)
[»] scaffold0955 (1 HSPs)
scaffold0955 (187-292)||(3463-3567)
[»] scaffold0021 (2 HSPs)
scaffold0021 (194-294)||(156958-157056)
scaffold0021 (205-279)||(106066-106140)
[»] scaffold0417 (1 HSPs)
scaffold0417 (190-294)||(10222-10326)
[»] scaffold0027 (1 HSPs)
scaffold0027 (194-294)||(139873-139973)
[»] scaffold0003 (1 HSPs)
scaffold0003 (194-294)||(320049-320149)
[»] scaffold0291 (1 HSPs)
scaffold0291 (194-265)||(2468-2539)
[»] scaffold0300 (1 HSPs)
scaffold0300 (207-301)||(4360-4454)
[»] scaffold0198 (1 HSPs)
scaffold0198 (206-267)||(10812-10872)
[»] scaffold0172 (1 HSPs)
scaffold0172 (204-265)||(15775-15836)
[»] scaffold0063 (1 HSPs)
scaffold0063 (207-268)||(35384-35445)


Alignment Details
Target: chr3 (Bit Score: 248; Significance: 1e-137; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 372 - 692
Target Start/End: Complemental strand, 1936163 - 1935839
Alignment:
Q  372 agaatatttaggatattgtgcaagtttagagtttaggtgccgatttcctaaaggatagggaacatagctttccaggttattaaaccttgttggttccctt 471  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  1936163 agaaaatttaggatattgtgcaagtttagagtttaggtgcccatttcctaagggatagggaacatagctttccaggttattataccttgttggttccctt 1936064  T
Q  472 actttgtttctgaaa---agttttagtaattaggtgctaaaatataggtaaaaacacaattttagcatattagtatgtactctaatcatgtatgtagtgc 568  Q
    |||||||||||||||   |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1936063 actttgtttctgaaactaagttttagtaattaggtgctaaaatataggcaaaaacataattttagcatattagtatgtactctaatcatgtatgtagtgc 1935964  T
Q  569 ttattatatgtgccgaaattactaattaatgggataaccagaatggttgaatgcaacaacagggcaaatcacttttgttatgcagcatacttttcattca 668  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   |||||||||| ||||||||||||||||||||||||||||    
T  1935963 ttattatatgtgccgaaattactaattaatggtataaccagaatggttgaatgcaaca--ggggcaaatcatttttgttatgcagcatacttttcattca 1935866  T
Q  669 tttccaa---agctttacaagtaaatt 692  Q
    |||||||   ||| |||||||||||||    
T  1935865 tttccaaattagcgttacaagtaaatt 1935839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 486 - 691
Target Start/End: Complemental strand, 1929829 - 1929626
Alignment:
Q  486 aagttttagtaattaggtgctaaaatata-ggtaaaaacacaattttagcatat---tagtatgtactctaatcatgtatgtagtgcttattatatgtgc 581  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||| |||| ||   ||||| ||||||||||||| || ||||||||||||||  ||||    
T  1929829 aagttttagtaattatgtgctgaaatataaggtaaaaacacaatttcagcacataattagta-gtactctaatcatttaagtagtgcttattat--gtgc 1929733  T
Q  582 cgaaattactaattaatgggataaccagaatggttgaatgcaacaacagggcaaatcacttttgttatgcagcatacttttcattcatttccaaagcttt 681  Q
    ||||||| ||||||||||| | |||||||||||||||||||   ||||| | |||||| || |||||||||||||||||||||||  |||||||||||||    
T  1929732 cgaaattgctaattaatggtagaaccagaatggttgaatgc---aacagagaaaatcatttgtgttatgcagcatacttttcatttgtttccaaagcttt 1929636  T
Q  682 acaagtaaat 691  Q
    || |||||||    
T  1929635 acgagtaaat 1929626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 30510275 - 30510168
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatggg 286  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||| ||||||| || ||||||||| ||||||||||||||||||||||| ||| ||||    
T  30510275 aatccacttgggttgtcctggtggtactggcttgggacctaggagtatgctccttctcgaggtctcaggttcgattctctctagtgtcaatctaagtggg 30510176  T
Q  287 ctaattta 294  Q
    ||||||||    
T  30510175 ctaattta 30510168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 36720384 - 36720495
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||||||| |||||||||||||||||| ||  | |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||  ||||||     
T  36720384 ccacttgggttggtctggtggtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgattctctctagtgtcaatttaggtgggctg 36720483  T
Q  290 atttaacttctt 301  Q
     |||| ||||||    
T  36720484 gtttagcttctt 36720495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 194 - 301
Target Start/End: Original strand, 2667869 - 2667976
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    ||||||||  ||||||||||||||||| || || ||||||||||| |||| ||||||||| |||||||| |||||||||||||||||  ||||||| |||    
T  2667869 ttgggttggcctggtggtattggcttgggatctgggagtgtgctcttcctcgaggtctcaggttcgattatctctagtgtcaatttaggtgggctagttt 2667968  T
Q  294 aacttctt 301  Q
    | ||||||    
T  2667969 agcttctt 2667976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 207 - 298
Target Start/End: Complemental strand, 32651494 - 32651403
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaactt 298  Q
    |||||||||||||| ||||| ||||||||||||||||  || |||||  ||||||||||||||||||||||||| |||||||| ||||||||    
T  32651494 gtggtattggcttgggacctgggagtgtgctcctcctcaagatctcagattcgattctctctagtgtcaatttagatgggctagtttaactt 32651403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 187 - 301
Target Start/End: Original strand, 53473365 - 53473479
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatggg 286  Q
    ||||||||||| |||| |||||||||||| |||| || |||||| | | |||||||||||||| ||| |||| |||||||||| ||||||||||||| ||    
T  53473365 aatccacttggtttgtcctggtggtattgacttgagatctaggattttactcctccttgaggtatcatgttcaattctctctaatgtcaatttaaattgg 53473464  T
Q  287 ctaatttaacttctt 301  Q
    || ||||| ||||||    
T  53473465 ctgatttaccttctt 53473479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 228 - 301
Target Start/End: Complemental strand, 52770018 - 52769945
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||  |||||||||||| ||||||    
T  52770018 ggagtgtgctcctccttgaggtctcaggttcgattctctttagtgtcaatttaggtgggctaatttagcttctt 52769945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 31520678 - 31520574
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  ||||||| ||||||||| || || |||||||||||||||| ||||||| | ||| ||||||||| ||||||||||| | |||||||    
T  31520678 ccacttgggttggcctggtggcattggcttgggatctgggagtgtgctcctcctcgaggtcttaggtttgattctctccagtgtcaatttgagtgggcta 31520579  T
Q  290 attta 294  Q
    |||||    
T  31520578 attta 31520574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 10499182 - 10499071
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  ||||||||||||||||| || || ||||| ||||| |||||||||||||| |||||||||||||   |||||||||   |||||||    
T  10499182 ccacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtctcaggttcgattctctccgatgtcaatttgggtgggcta 10499083  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  10499082 atttagcttctt 10499071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 265
Target Start/End: Complemental strand, 47454690 - 47454615
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||||||||||||||| |||||||||||||| || || |||||||||||||||| ||||||||| |||||||||||    
T  47454690 ccacttgggttgttctagtggtattggcttgagatcttggagtgtgctcctcctcgaggtctcaggttcgattctc 47454615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 51903951 - 51903840
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||| |||||||  ||| ||||||||||||| || || |||||||||||||||| | ||||||| |||||||||||||  |||||||||| | |||||||    
T  51903951 ccacctgggttgacctgttggtattggcttgggatctgggagtgtgctcctcctcgtggtctcaggttcgattctctccggtgtcaatttgagtgggcta 51903852  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  51903851 atttagcttctt 51903840  T

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Target: chr3; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 191 - 301
Target Start/End: Complemental strand, 45308974 - 45308864
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaa 290  Q
    |||||||||||||||||||||||||| ||| ||| |  |||| |||||||||| ||||||||| |||||||| |||  |||||||||| || ||| ||||    
T  45308974 cacttgggttgttctggtggtattggtttgggacttgtgagtatgctcctcctcgaggtctcaggttcgattatcttcagtgtcaattcaagtggactaa 45308875  T
Q  291 tttaacttctt 301  Q
    |||| ||||||    
T  45308874 tttagcttctt 45308864  T

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Target: chr3; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 10445190 - 10445101
Alignment:
Q  212 attggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||| ||||| |||||||||||||||| ||||||||| |||||||||||||| |||  ||||| | |||||||||||| ||||||    
T  10445190 attggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgctaatttgagtgggctaatttagcttctt 10445101  T

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Target: chr3; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 190 - 266
Target Start/End: Complemental strand, 2597293 - 2597217
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctct 266  Q
    |||||||||||| |||||||||||||||||  ||  |||||||||||||||||||||||||||| |||||| |||||    
T  2597293 ccacttgggttggtctggtggtattggcttcggatttaggagtgtgctcctccttgaggtctcaggttcgaatctct 2597217  T

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Target: chr3; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 4844580 - 4844473
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    |||||||| ||||||||||||| |||| || || |||||||||||||||| ||||||||| | |||||||||||  ||| ||||||   |||||||||||    
T  4844580 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaattt 4844481  T
Q  294 aacttctt 301  Q
    | ||||||    
T  4844480 agcttctt 4844473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 4870276 - 4870169
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    |||||||| ||||||||||||| |||| || || |||||||||||||||| ||||||||| | |||||||||||  ||| ||||||   |||||||||||    
T  4870276 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaattt 4870177  T
Q  294 aacttctt 301  Q
    | ||||||    
T  4870176 agcttctt 4870169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 194 - 293
Target Start/End: Original strand, 32638952 - 32639051
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    |||||||||||||||||||||||||||  | || |||||||| || || | ||||||||| |||||||| |||| ||||||||||||| ||| |||||||    
T  32638952 ttgggttgttctggtggtattggcttggaaactgggagtgtgttcatcttcgaggtctcaggttcgattttctccagtgtcaatttaagtggcctaattt 32639051  T

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Target: chr3; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 37788538 - 37788449
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||  |  ||||||||| ||||  |||||||||||||||||||||  |||||||| |||||||||||||||||| ||||||    
T  37788538 ccacttgggttggcccagtggtattgacttggaacctaggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaattt 37788449  T

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Target: chr3; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 53412948 - 53413037
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||||||| ||| ||||||||||||||  |||| ||||||||||||||||  |||||||| |||| ||||||||| ||| ||||||    
T  53412948 ccacttgggttggtctagtggtattggcttgtaacctgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaattt 53413037  T

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Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 8051217 - 8051328
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  ||||||||||||||||| ||||| | ||| |||| ||||| ||||||||||||||||||| |||  ||| |||||||  ||||||     
T  8051217 ccacttgggttggcctggtggtattggcttgggacctggcagtatgcttctcctcgaggtctcaagttcgattccctccggtgccaatttagttgggctc 8051316  T
Q  290 atttaacttctt 301  Q
     |||| ||||||    
T  8051317 gtttagcttctt 8051328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 8075196 - 8075089
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    ||||||||  || ||||||| |||||| ||| | ||||||||||||||||  |||| ||| ||||||||| |||||||||||||||   |||||||||||    
T  8075196 ttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtttcaggttcgattccctctagtgtcaatttgggtgggctaattt 8075097  T
Q  294 aacttctt 301  Q
    | ||||||    
T  8075096 agcttctt 8075089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 187 - 301
Target Start/End: Complemental strand, 13808961 - 13808847
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatggg 286  Q
    ||||||||||||||| ||||||  ||||| |||| || || | ||||||||||||||  |||||||| |||| |||||||||| |||||||||  ||||     
T  13808961 aatccacttgggttggtctggtcttattgacttgggatctggcagtgtgctcctcctctaggtctcaggttcaattctctctaatgtcaatttggatgga 13808862  T
Q  287 ctaatttaacttctt 301  Q
     ||||||| ||||||    
T  13808861 ttaatttagcttctt 13808847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 14186651 - 14186740
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattta 280  Q
    ||||||||||||  || ||||||||| |||| ||||| ||||||||||||||||  |||||||| |||||||||||||  |||||||||||    
T  14186651 ccacttgggttggcctagtggtattgtcttgggacct-ggagtgtgctcctcctcaaggtctcaggttcgattctctccggtgtcaattta 14186740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 301
Target Start/End: Original strand, 14339627 - 14339724
Alignment:
Q  204 ctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||||||| ||  | ||||||||||||||||  | |||||| ||||||||||| |||||| ||||| |  |||||||||||| ||||||    
T  14339627 ctggtggtattggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaattaaggtgggctaatttagcttctt 14339724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 21960558 - 21960631
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctc 267  Q
    ||||||||  ||||||||||||||||| |||||  ||||||||||||||| |||||||||  ||||||||||||    
T  21960558 ttgggttgcgctggtggtattggcttgggacctgagagtgtgctcctcctcgaggtctcagattcgattctctc 21960631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 4222144 - 4222255
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||   | |||||||||||||| || || ||||||||||||||||  | |||| | |||||||||||||| |||||||||||  || | ||    
T  4222144 ccacttgggttggcttagtggtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgattctctctggtgtcaatttaggtgagtta 4222243  T
Q  290 atttaacttctt 301  Q
     |||||||||||    
T  4222244 gtttaacttctt 4222255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 12761520 - 12761587
Alignment:
Q  195 tgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgatt 262  Q
    ||||||| ||||||||||||| |||| ||||| |||||||| ||||||||||| ||||| ||||||||    
T  12761520 tgggttggtctggtggtattgacttgggacctgggagtgtgttcctccttgagctctcaggttcgatt 12761587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 23245055 - 23244984
Alignment:
Q  230 agtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||| | || || ||||||||||||||| |  | |||||||||||||||||||||||||||||||||    
T  23245055 agtgtgctcattctcgatgtctcaagttcgatttttccgagtgtcaatttaaatgggctaatttaacttctt 23244984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 27093434 - 27093345
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||  || ||||||||||||||  || | ||||||||||||||||  |||||||| ||| |||||||||| ||| ||||||    
T  27093434 ccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaattt 27093345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 210 - 279
Target Start/End: Original strand, 40063642 - 40063711
Alignment:
Q  210 gtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||| || ||  |||| ||||||||||| |||||||||||||||||||||| |||| ||||||    
T  40063642 gtattggcttgggatctgagagtatgctcctccttaaggtctcaagttcgattctctccagtgccaattt 40063711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 228 - 301
Target Start/End: Original strand, 49452914 - 49452986
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||||||  |||||||| |||| || | |||||||||||||||  ||||||||||||||||||||    
T  49452914 ggagtgtgctcctcctcaaggtctcaggttcaatcc-ctctagtgtcaatttggatgggctaatttaacttctt 49452986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 190 - 263
Target Start/End: Original strand, 53956387 - 53956460
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattc 263  Q
    ||||||||||||| ||| ||| ||||||||| ||||  ||||||||| ||| |||||||||||| |||||||||    
T  53956387 ccacttgggttgtcctgatggcattggcttgggacccgggagtgtgccccttcttgaggtctcatgttcgattc 53956460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 301
Target Start/End: Complemental strand, 16213050 - 16212934
Alignment:
Q  185 tcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatg 284  Q
    |||| |||||||||||| |||  || | ||| |||| ||| | ||||||||||||||||| ||||||||||||| |||| |||  || |||||||  |||    
T  16213050 tcaacccacttgggttggtctaatgatgttgccttgagacttgggagtgtgctcctccttaaggtctcaagttcaattcactccggtatcaatttggatg 16212951  T
Q  285 ggctaatttaacttctt 301  Q
    | |||||||| ||||||    
T  16212950 gactaatttagcttctt 16212934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 20501738 - 20501809
Alignment:
Q  229 gagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||||| |||||||| ||||||||||||| |||| ||||||  | ||||||||||| ||||||    
T  20501738 gagtgtgctcctccttaaggtctcaggttcgattctctccagtgccaattt-gaggggctaatttagcttctt 20501809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 279
Target Start/End: Original strand, 27259185 - 27259253
Alignment:
Q  211 tattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||||| ||||| |||||||||||||||| ||||| ||| ||| ||||||||||  |||||||||    
T  27259185 tattggcttgggacctgggagtgtgctcctcctcgaggtttcaggtttgattctctctgatgtcaattt 27259253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 5499480 - 5499369
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  |||||||||||| |||| || ||  |||||||||||||||| |||||| | |||| |||||| |  ||| |||||| ||| | |||    
T  5499480 ccacttgggttggcctggtggtattgacttgagatctgagagtgtgctcctccttaaggtctaaggttctattctccccggtgccaatttcaatagacta 5499381  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  5499380 atttagcttctt 5499369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 194 - 301
Target Start/End: Original strand, 8170679 - 8170786
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    ||||||||  || ||||||||||||||  || | ||||||||||||| ||  |||||||| ||||||||  |||| ||||||||||   |||||||||||    
T  8170679 ttgggttggcctagtggtattggcttgaaacttgggagtgtgctcctactcaaggtctcaggttcgatttcctctggtgtcaatttgggtgggctaattt 8170778  T
Q  294 aacttctt 301  Q
    || |||||    
T  8170779 aaattctt 8170786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 281
Target Start/End: Complemental strand, 16354965 - 16354874
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaa 281  Q
    ||||||||||||  || ||||||||||||||  ||||  |||||||||||||||   ||||||| |||||||||||||| ||| ||| ||||    
T  16354965 ccacttgggttggcctagtggtattggcttggaacctgtgagtgtgctcctcctcagggtctcaggttcgattctctctggtgccaaattaa 16354874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 194 - 301
Target Start/End: Original strand, 16991549 - 16991656
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    ||||||||  ||||||||||||||||| || || ||||||| ||| || |||||||||||  || |||||||||   || |||||||  |||||||||||    
T  16991549 ttgggttggcctggtggtattggcttgggatctgggagtgtactcttctttgaggtctcagttttgattctctccgatgccaatttatgtgggctaattt 16991648  T
Q  294 aacttctt 301  Q
    | ||||||    
T  16991649 agcttctt 16991656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 214 - 301
Target Start/End: Complemental strand, 44743904 - 44743817
Alignment:
Q  214 tggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||| || || |||||||||||||||| ||||||||| |||||||| |||| |||| ||||||   |||| ||||||| ||||||    
T  44743904 tggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattatctccagtgccaatttgggtgggttaatttagcttctt 44743817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 211 - 301
Target Start/End: Complemental strand, 11090217 - 11090127
Alignment:
Q  211 tattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||| || || ||| |||||||||||| ||||||| |  ||||||||| || ||||||||||||| | || ||||||| ||||||    
T  11090217 tattggcttgggatctgggaatgtgctcctcctcgaggtcttagtttcgattctttcgagtgtcaatttaagtaggttaatttagcttctt 11090127  T

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Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 28703477 - 28703388
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||||||| ||  ||| |||| ||||| || || |||||||||||||| |  |||||||| |||||||||||||| ||| ||||||    
T  28703477 ccacttgggttggtccagtgatattagcttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctctggtgccaattt 28703388  T

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Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 29186498 - 29186563
Alignment:
Q  236 ctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||  ||||| || |||||||||||| ||||||||||||  |||| |||||||||||||||    
T  29186498 ctcctcctcaaggtcacatgttcgattctctttagtgtcaatttggatggactaatttaacttctt 29186563  T

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Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 268
Target Start/End: Original strand, 29563916 - 29563981
Alignment:
Q  203 tctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctct 268  Q
    |||||||||||||||||| || || | |||||||| ||||| || |||||| ||||||||||||||    
T  29563916 tctggtggtattggcttgagatctggaagtgtgcttctcctcgaagtctcaggttcgattctctct 29563981  T

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Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 30311309 - 30311398
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||| |||||||  || ||||||| |||||| || || ||||||||||||||||  |||||||| |||||||||||| | ||| ||||||    
T  30311309 ccacctgggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgccaattt 30311398  T

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Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 299
Target Start/End: Complemental strand, 31789043 - 31788935
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  || ||| |||||||||| || || |||||||||||||||| ||||| | | ||| |||| ||||| ||||||||||   |||||||    
T  31789043 ccacttgggttggcctagtgttattggcttgggatctgggagtgtgctcctcctcgaggttttaggtttgattatctct-gtgtcaatttgggtgggcta 31788945  T
Q  290 atttaacttc 299  Q
     |||||||||    
T  31788944 gtttaacttc 31788935  T

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Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 53863940 - 53863852
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||| |||||| | |||||||| ||||| ||||||||||||| ||  |||||| | |||| ||||||||| ||| ||||||    
T  53863940 ccacttgggttgtcctggtgatgttggcttgggaccttggagtgtgctcct-ctcaaggtcttaggttcaattctctctggtgccaattt 53863852  T

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Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 478881 - 478810
Alignment:
Q  229 gagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||  ||||||||| |||||||||| |||| |||  |||||||||||| |||||||||||| ||||||    
T  478881 gagtgtgcatctccttgag-tctcaagttcaattcactccggtgtcaatttaagtgggctaatttagcttctt 478810  T

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Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 210 - 294
Target Start/End: Complemental strand, 28531111 - 28531027
Alignment:
Q  210 gtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    ||||||||||| || || ||||| |||||||||| ||||||| | | || ||||||||| ||||||||||   ||||||||||||    
T  28531111 gtattggcttgggatctgggagtatgctcctcctcgaggtcttaggctcaattctctctggtgtcaatttgggtgggctaattta 28531027  T

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Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 30232333 - 30232437
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  ||||||||||||| |||||| || | | ||||||||||||   ||||||| |||| ||||||||  ||| ||||||   |||||||    
T  30232333 ccacttgggttgccctggtggtattggtttgcgatctggaactgtgctcctcctcatggtctcaggttccattctctccggtgccaatttggttgggcta 30232432  T
Q  290 attta 294  Q
    |||||    
T  30232433 attta 30232437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 31510791 - 31510687
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||| ||||| ||||||||||||| |||| ||| | ||||| ||||||||| |  ||||| ||||||||||||| |  |||  ||||||  |||||||    
T  31510791 ccacttaggttggtctggtggtattgacttgggacttgggagtatgctcctccatacggtctaaagttcgattctccccggtgctaatttaggtgggcta 31510692  T
Q  290 attta 294  Q
    |||||    
T  31510691 attta 31510687  T

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Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 205 - 301
Target Start/End: Original strand, 44069776 - 44069872
Alignment:
Q  205 tggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||| |||||||| || || ||||||||||||||||  |||||||| ||| |||||| ||  ||| |||||||  ||||||| |||| ||||||    
T  44069776 tggtggtgttggcttgagatcttggagtgtgctcctcctcaaggtctcaggtttgattctttccggtgccaatttaggtgggctagtttagcttctt 44069872  T

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Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 45699962 - 45699890
Alignment:
Q  229 gagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||||| | || | |  ||||||||||||  ||| |||||||| |||||||||||||||||||    
T  45699962 gagtgtgctcctccttaaagtttgagattcgattctctcgtgtgccaatttaagtgggctaatttaacttctt 45699890  T

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Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 47860779 - 47860862
Alignment:
Q  210 gtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    ||||||||||  || |||||||||||||||||||  | ||||| |||||||||||||||  |||| ||||  |||||||||||||    
T  47860779 gtattggctttggatctaggagtgtgctcctcctcaaagtctc-agttcgattctctctgctgtcgatttggatgggctaattta 47860862  T

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Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 54414254 - 54414329
Alignment:
Q  225 ctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||| ||||||||| ||||| ||||||||  |||||||||||| |  ||||||||||||| ||||||||| ||||||    
T  54414254 ctagaagtgtgctcgtccttaaggtctcagattcgattctctcca-agtcaatttaaatgagctaatttagcttctt 54414329  T

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Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 54990706 - 54990816
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattct-ctctagtgtcaatttaaatgggct 288  Q
    |||||||||||||| | ||| | |||||||| ||||| |||| |||||||||||  |||||||| |||||||||| ||| | || |||||||  ||||||    
T  54990706 ccacttgggttgtt-tagtgttgttggcttgggaccttggagcgtgctcctcctcaaggtctcaggttcgattctcctcga-tggcaatttaggtgggct 54990803  T
Q  289 aatttaacttctt 301  Q
    |||||| ||||||    
T  54990804 aatttagcttctt 54990816  T

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Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 3427588 - 3427537
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||||||  ||||||||  ||||||||||||||||| ||||||    
T  3427588 ggagtgtgctcctcctcaaggtctcagattcgattctctctagtgccaattt 3427537  T

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Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 301
Target Start/End: Complemental strand, 8853852 - 8853761
Alignment:
Q  210 gtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||| ||||| ||| | ||||| |||||||||||||||||||| ||||||| |||  | ||| ||||||   |||| ||||||||||||||    
T  8853852 gtattagcttgggacatgggagtatgctcctccttgaggtctcatgttcgatcctccttggtgccaatttgggtgggttaatttaacttctt 8853761  T

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Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 10683016 - 10682969
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgct 237  Q
    |||||||||||| ||| |||||||||||||| ||||| ||||||||||    
T  10683016 ccacttgggttgatctagtggtattggcttgagaccttggagtgtgct 10682969  T

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Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 294
Target Start/End: Complemental strand, 13613511 - 13613413
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaa 290  Q
    |||||||| ||| ||| ||||| ||||||| ||||| | ||||||||||||||||  |||||| |     ||||||| || |||||||||| ||||||||    
T  13613511 cacttgggctgtcctgatggtaatggcttgggacctggaagtgtgctcctccttgtagtctcatg-----ttctctccagcgtcaatttaagtgggctaa 13613417  T

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Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 265
Target Start/End: Original strand, 17034988 - 17035064
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    ||||||||||||||| ||||||||||||| |||| || ||  ||| |||||| ||||  |||||||| |||||||||||    
T  17034988 aatccacttgggttgctctggtggtattgacttgggatct--gagagtgctcatcctcaaggtctcaggttcgattctc 17035064  T

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Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 18316571 - 18316520
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctc 241  Q
    |||||||||||| |||||||||  ||||||| ||||| ||||||||||||||    
T  18316571 ccacttgggttggtctggtggtgctggcttgggaccttggagtgtgctcctc 18316520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 33899655 - 33899706
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||||||  |||||||| |||||||||||| | ||||||||||    
T  33899655 ggagtgtgctcctcctctaggtctcaggttcgattctctttggtgtcaattt 33899706  T

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Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 265
Target Start/End: Original strand, 40268492 - 40268566
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||||||||||   |||||||| |||||||| ||||| |||||| |||||| ||| |||||||| |||||||||||    
T  40268492 ccacttgggtttgcctggtggtgttggcttgggaccttggagtgggctcct-cttaaggtctcaggttcgattctc 40268566  T

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Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 42799820 - 42799769
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctc 241  Q
    ||||||||||||  |||||||| |||||||| ||||| ||||||||||||||    
T  42799820 ccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctc 42799769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 43902415 - 43902360
Alignment:
Q  210 gtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    ||||||||||| |||||||||||| ||| ||||| |||||||||  ||||||||||    
T  43902415 gtattggcttgtgacctaggagtgcgcttctcctcgaggtctcagattcgattctc 43902360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 47810817 - 47810707
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||||||| |||||||||||||||||  | | | |||||||||||||||   |||||||  ||| |||||||||  ||| ||||||   ||||||     
T  47810817 ccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcgggtttgattctctccggtgccaatttgggtgggct- 47810719  T
Q  290 atttaacttctt 301  Q
    ||||||||||||    
T  47810718 atttaacttctt 47810707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 8390640 - 8390730
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattta 280  Q
    |||||||| ||| ||| ||||||||| |||| ||| | | ||||||||| ||||  |||||| |  ||||||||| |||||||||||||||    
T  8390640 ccacttggattggtctagtggtattgccttgagacttggaagtgtgctcttcctcaaggtcttagattcgattctttctagtgtcaattta 8390730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 11612307 - 11612373
Alignment:
Q  195 tgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgat 261  Q
    |||||||  |||||||||||  |||| || || ||||||||||||||||| |||||||| |||||||    
T  11612307 tgggttggcctggtggtattcacttgggagctgggagtgtgctcctccttaaggtctcaggttcgat 11612373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 205 - 299
Target Start/End: Original strand, 19716215 - 19716309
Alignment:
Q  205 tggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttc 299  Q
    ||||||| |||||||| ||||  ||||||||||||||||  |||||||  ||||||||||| |  ||| ||||||   |||||||||||| ||||    
T  19716215 tggtggtgttggcttgggaccatggagtgtgctcctcctcaaggtctctggttcgattctccccggtgacaatttgggtgggctaatttagcttc 19716309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 228 - 294
Target Start/End: Complemental strand, 33861769 - 33861703
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    |||||||||||||||| ||||||| | ||||||||||| | | | ||||||||  ||||||||||||    
T  33861769 ggagtgtgctcctcctcgaggtctaatgttcgattctccccaatatcaatttaggtgggctaattta 33861703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 46518631 - 46518709
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctct 268  Q
    ||||||||||||   | |||||||||||||| || || ||||||||||||||||  |||| ||| ||| ||||||||||    
T  46518631 ccacttgggttggcatagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctct 46518709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 294
Target Start/End: Original strand, 7673279 - 7673376
Alignment:
Q  197 ggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    ||||| ||||||||||||| |||| ||  | | ||||||||  | ||  |||||| | ||||||| ||||||| ||||||||||||||| ||||||||    
T  7673279 ggttggtctggtggtattgacttgggatttggaagtgtgcttattctcaaggtcttaggttcgatactctctaatgtcaatttaaatggactaattta 7673376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 15048116 - 15048023
Alignment:
Q  208 tggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||| |||||| || || ||| ||||||||||||  |||||||| |||||||| ||||| ||| |||||| |  ||| || |||||||||||    
T  15048116 tggtataggcttgggatctgggaatgtgctcctcctcaaggtctcaggttcgattatctctggtgccaatttgagggggttagtttaacttctt 15048023  T

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Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 17554778 - 17554827
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctcct 243  Q
    |||||||| | |||||||||||||||| ||||| ||||||||||| ||||    
T  17554778 ttgggttggtttggtggtattggcttgggacctgggagtgtgctcttcct 17554827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 279
Target Start/End: Original strand, 19154654 - 19154723
Alignment:
Q  210 gtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||| | |||  |||||||||||||||  |||||||| |||||||||||| |  |||||||||    
T  19154654 gtattggcttgaggcctgagagtgtgctcctcctaaaggtctcaggttcgattctctttgatgtcaattt 19154723  T

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Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 263
Target Start/End: Original strand, 34844374 - 34844446
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattc 263  Q
    ||||||||||||  |||||| | |||||||| ||||| ||||||||||||| ||  |||||||| |||||||||    
T  34844374 ccacttgggttgccctggtgttgttggcttgagaccttggagtgtgctcct-ctcaaggtctcaggttcgattc 34844446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 34929012 - 34928903
Alignment:
Q  192 acttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaat 291  Q
    |||||||||| ||| ||| ||| | |||  |||||  |||| ||||||||||| ||||||||  |||||||||||||| ||  |||||||  | | ||||    
T  34929012 acttgggttgatctagtgatatggacttaggacctgagagtatgctcctccttaaggtctcagattcgattctctctaatgctaatttaagagagttaat 34928913  T
Q  292 ttaacttctt 301  Q
    ||||||||||    
T  34928912 ttaacttctt 34928903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 301
Target Start/End: Complemental strand, 38550439 - 38550366
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||||||||||||| | |||| |||||||   |||| |||||  ||| ||||||||| ||||||    
T  38550439 ggagtgtgctcctccttgaggtctgaggttcaattctcttctgtgttaatttggatgagctaatttagcttctt 38550366  T

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Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 40777017 - 40777104
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||||||| ||||||||| ||| | || ||| | |||||||||||||| |  |||||||| ||| |||||||||||||| ||||||    
T  40777017 ccacttgggttgatctggtggtgttg-catgggacattggagtgtgctcctc-tcaaggtctcaggtttgattctctctagtgccaattt 40777104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 47237030 - 47236969
Alignment:
Q  204 ctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    ||||||||||||| ||| ||||  |||||||||||||| |  |||||||| |||||||||||    
T  47237030 ctggtggtattggtttgggacccgggagtgtgctcctcttcaaggtctcatgttcgattctc 47236969  T

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Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 47279458 - 47279405
Alignment:
Q  209 ggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgatt 262  Q
    |||||| ||||| || || ||||||||||||||||| |||||||| ||||||||    
T  47279458 ggtatttgcttgggatctgggagtgtgctcctccttaaggtctcatgttcgatt 47279405  T

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Target: chr4 (Bit Score: 68; Significance: 5e-30; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 51948483 - 51948594
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||| ||||| |||||| |||| || |||||||||||| |||||| ||||||||| |||| |||||||| ||||||||||||||||| |||    
T  51948483 ccacttgggttgtcctggtagtattgacttgggatctaggagtgtgcccctcctcgaggtctcaggttcaattctctccagtgtcaatttaaatggacta 51948582  T
Q  290 atttaacttctt 301  Q
    ||||||||||||    
T  51948583 atttaacttctt 51948594  T

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Target: chr4; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 191 - 301
Target Start/End: Original strand, 13901746 - 13901856
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaa 290  Q
    ||||||||||| ||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||| ||||| |||| ||| ||||||  |||| |||    
T  13901746 cacttgggttggtctagtggtattggcttgagacctgggagtgtgttcctccttgaggtctcaagttcaattctatctaatgttaatttaggtgggttaa 13901845  T
Q  291 tttaacttctt 301  Q
    |||| ||||||    
T  13901846 tttagcttctt 13901856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 21660215 - 21660106
Alignment:
Q  192 acttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaat 291  Q
    |||||||||| ||||||||||||| |||| || || ||||||||||| |||| |||||||||||||||||| |||||||||||||||||  | | |||||    
T  21660215 acttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgattatctctagtgtcaatttaggtagactaat 21660116  T
Q  292 ttaacttctt 301  Q
    ||| ||||||    
T  21660115 ttagcttctt 21660106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 21668979 - 21668870
Alignment:
Q  192 acttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaat 291  Q
    |||||||||| ||||||||||||| |||| || || ||||||||||| |||| |||||||||||||||||| |||||||||||||||||  | | |||||    
T  21668979 acttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgattatctctagtgtcaatttaggtagactaat 21668880  T
Q  292 ttaacttctt 301  Q
    ||| ||||||    
T  21668879 ttagcttctt 21668870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 4185096 - 4185200
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||| ||||| |||||||||||||| ||| ||| || ||||||| ||||||| ||||||||||| ||||||||| ||||||||||||||  |||||||    
T  4185096 ccactttggttgatctggtggtattggtttgggacttaagagtgtgatcctcctcgaggtctcaagatcgattctccctagtgtcaatttaggtgggcta 4185195  T
Q  290 attta 294  Q
    |||||    
T  4185196 attta 4185200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 7949508 - 7949416
Alignment:
Q  209 ggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||| ||||| ||||||||||||||||  |||||||| |||||||||||||| |||||||||||  |||||||||||| ||||||    
T  7949508 ggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttaggtgggctaatttagcttctt 7949416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 27965583 - 27965465
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgc-------tcctccttgaggtctcaagttcgattctctctagtgtcaatttaaa 282  Q
    ||||||||||||  || |||||||||||||| || || |||||||||       ||||||||||||||||||||||||||||||||| |||| ||||||     
T  27965583 ccacttgggttggcctagtggtattggcttgggatctgggagtgtgcagtggactcctccttgaggtctcaagttcgattctctctaatgtcgatttaag 27965484  T
Q  283 tgggctaatttaacttctt 301  Q
    |||||||||||| ||||||    
T  27965483 tgggctaatttaccttctt 27965465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 8030277 - 8030166
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||| |||  || ||||||| |||||| ||| | ||||||||||||||||  |||||||||||||||||| |||||||||||||||   |||||||    
T  8030277 ccacttggattgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaagttcgattccctctagtgtcaatttgggtgggcta 8030178  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  8030177 atttagcttctt 8030166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 8306488 - 8306599
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||| |||| |||| ||| || |||||| ||||| |||||||||||||||| || |||| |||||||||||||||||||||||||||  ||||  ||    
T  8306488 ccacttgagttggtctgttggcatcggcttgagacctgggagtgtgctcctcctcgaagtcttaagttcgattctctctagtgtcaatttggatggtata 8306587  T
Q  290 atttaacttctt 301  Q
    |||||| |||||    
T  8306588 atttaatttctt 8306599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 28635699 - 28635810
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||| ||||||||| || |||| || || |||||||||||||||| ||||||| | |||||||||||||| ||| ||||||   |||||||    
T  28635699 ccacttgggttgtcctggtggtactgacttgggatctgggagtgtgctcctcctggaggtcttaggttcgattctctctggtgccaatttgggtgggcta 28635798  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  28635799 atttagcttctt 28635810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 7292871 - 7292782
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||||||| ||| ||||||||||||||  |||| ||||||||||||||||  | |||||| |||||||||||||||||| ||||||    
T  7292871 ccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgattctctctagtgccaattt 7292782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 37109424 - 37109335
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||  || |||||||||||||| ||||| ||||||||||||||||  |||||||| |||||||||||||| ||| ||||||    
T  37109424 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 37109335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 211 - 301
Target Start/End: Original strand, 23377980 - 23378070
Alignment:
Q  211 tattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||| ||||| ||||||||||||||||  |||||||| |||||||||||||||||| |||||| |  |||||| |||| ||||||    
T  23377980 tattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttgagggggctagtttagcttctt 23378070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 37274510 - 37274421
Alignment:
Q  212 attggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||| ||||| ||||||||||||||||  |||||| | |||||||||||||| |||  ||||||| |||||||||||| ||||||    
T  37274510 attggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgctaatttaagtgggctaatttagcttctt 37274421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 228 - 301
Target Start/End: Original strand, 41047518 - 41047590
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||| ||||| |||||| ||||||||||||| ||| ||||||||||||| |||||||||||||||    
T  41047518 ggagtgtgctcctacttgaagtctca-gttcgattctctcaagtatcaatttaaatggactaatttaacttctt 41047590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 24234649 - 24234725
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctc 267  Q
    |||||||||||| | ||||||||||||||| ||| | ||||||||||| ||||  ||||||||||||||||||||||    
T  24234649 cacttgggttgtccaggtggtattggcttgggacttgggagtgtgctcatcctgaaggtctcaagttcgattctctc 24234725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 39509073 - 39509177
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||||||| |||  ||||| ||||||| || || |||||||||||||||| ||||||||| ||||||||||| | |||| |||||||  |||| ||    
T  39509073 ccacttgggttggtctcatggtaatggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagtggcaatttaggtgggtta 39509172  T
Q  290 attta 294  Q
    |||||    
T  39509173 attta 39509177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 189 - 301
Target Start/End: Complemental strand, 49576968 - 49576856
Alignment:
Q  189 tccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggct 288  Q
    |||| ||||||||  ||||||||||||||||  ||| | ||||||||||||||||  |||||||| ||||||||||||| | |||||||||   ||| ||    
T  49576968 tccaattgggttggcctggtggtattggctttggacttgggagtgtgctcctcctcaaggtctcaggttcgattctctccaatgtcaatttgggtggact 49576869  T
Q  289 aatttaacttctt 301  Q
    || ||||||||||    
T  49576868 aacttaacttctt 49576856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 185 - 265
Target Start/End: Complemental strand, 55427278 - 55427198
Alignment:
Q  185 tcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||| ||||||||||||  ||||||||||||||||| ||||| ||||| ||||||| || ||||||||| |||||||||||    
T  55427278 tcaacccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctc 55427198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 13015447 - 13015534
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    |||||||||||||| ||| | |||||||||||||||| || |||||| |||||||||||||  |||||||||||  |||| |||||||    
T  13015447 gtggtattggcttgggacttgggagtgtgctcctcctcgaagtctcatgttcgattctctcaggtgtcaatttaggtgggttaattta 13015534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 265
Target Start/End: Complemental strand, 19238650 - 19238575
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    ||||||||||||  ||||||||||||||||| ||| | |||||||||||||||| ||||||||  |||||||||||    
T  19238650 ccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggtctcgggttcgattctc 19238575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 31826612 - 31826723
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  || ||||||| |||||| ||  |  |||||||||||||||  |||||||||||||||||| || ||||||||||||   |||||||    
T  31826612 ccacttgggttgccctagtggtataggcttgggatttgcgagtgtgctcctcctcaaggtctcaagttcgattccctttagtgtcaatttgggtgggcta 31826711  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  31826712 atttaccttctt 31826723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 32662801 - 32662868
Alignment:
Q  234 tgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||||||||| |||||||| |||   |||||||||||| |||||||||||||||||||    
T  32662801 tgctcctccttgaggtctcaggttcgattttcttcggtgtcaatttaagtgggctaatttaacttctt 32662868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 51250595 - 51250484
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  ||||||||||||||||| || || |||||||||||| |||  || ||||||||||||||| |||  ||| ||||||   |||||||    
T  51250595 ccacttgggttggcctggtggtattggcttgggatctgggagtgtgctccgcctcaagatctcaagttcgattccctccggtgccaatttgggtgggcta 51250496  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  51250495 atttagcttctt 51250484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 29195098 - 29195186
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||  |||||||| |||||||| ||||| ||||||||||||| ||  ||||| |||||||||||||||||| || ||||||    
T  29195098 ccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcct-ctcaaggtcgcaagttcgattctctctaatgccaattt 29195186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 33755968 - 33756077
Alignment:
Q  192 acttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaat 291  Q
    |||||||||| |||  |||| |||||||| ||| | | |||||||||||  |||||||||||||||| ||| |||||| | ||||||||  ||| |||||    
T  33755968 acttgggttggtctaatggtgttggcttgagacttggtagtgtgctcctgtttgaggtctcaagttcaattatctctaatatcaatttaggtggactaat 33756067  T
Q  292 ttaacttctt 301  Q
    ||||||||||    
T  33756068 ttaacttctt 33756077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 32992638 - 32992726
Alignment:
Q  213 ttggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||| ||||| ||||||||||||||||  |||||||||||||||||||| |  |||||||||| | ||| ||| |||| ||||||    
T  32992638 ttggcttgggaccttggagtgtgctcctcctcaaggtctcaagttcgattctccccggtgtcaatttgagtggactagtttagcttctt 32992726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 46545714 - 46545818
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  || |||||||||||||| |||||  |||||||||||||||  || |||||  ||||||| |||||  |||||||||| |||| |||    
T  46545714 ccacttgggttggcctagtggtattggcttgagacctgagagtgtgctcctcctcaagatctcagattcgattttctctgatgtcaatttagatggacta 46545813  T
Q  290 attta 294  Q
    |||||    
T  46545814 attta 46545818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 47386825 - 47386753
Alignment:
Q  229 gagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||| ||| || |||||||||||| |||| |||||||||||||||||||||  |||||||||||| ||||||    
T  47386825 gagtgcgcttcttcttgaggtctcaggttcaattctctctagtgtcaatttaggtgggctaatttagcttctt 47386753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 37720287 - 37720176
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  |||||| |||||||||| ||||| ||||||||| ||||||  ||||| || ||||||||||| |  |  ||||||||  |||||||    
T  37720287 ccacttgggttggcctggtgttattggcttgggacctgggagtgtgcccctcctcaaggtcccaggttcgattctcccagggatcaatttaggtgggcta 37720188  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  37720187 atttagcttctt 37720176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 205 - 259
Target Start/End: Original strand, 17618299 - 17618353
Alignment:
Q  205 tggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcg 259  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||| |||||    
T  17618299 tggtggtattggcttgagacctgggagtgtgctcctcctcgaggtctcatgttcg 17618353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 208 - 294
Target Start/End: Complemental strand, 19532057 - 19531971
Alignment:
Q  208 tggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    ||||||||||||| ||| |||||| |||||||||||| || | ||| ||||||||||||||  || |||||||  ||||||||||||    
T  19532057 tggtattggcttgggacataggagcgtgctcctccttaagttttcaggttcgattctctctgatgccaatttaggtgggctaattta 19531971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 264
Target Start/End: Complemental strand, 31759731 - 31759657
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattct 264  Q
    |||||||||||| ||| |||||||||||||| ||| | ||||||||||||||||  ||||||||  |||||||||    
T  31759731 ccacttgggttgatctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctcagattcgattct 31759657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 15729524 - 15729593
Alignment:
Q  229 gagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaactt 298  Q
    ||||||||||||||| || |||||||||||||||||| |  |||||||||| | |||||| |||||||||    
T  15729524 gagtgtgctcctcctcgatgtctcaagttcgattctcaccggtgtcaatttgattgggctgatttaactt 15729593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 228 - 301
Target Start/End: Original strand, 40285664 - 40285737
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||| ||||||||| |||||||||||| |||| ||| ||||||  |||| || |||||||||||    
T  40285664 ggagtgtgctcctctttgaggtctaaagttcgattctttctaatgttaatttaggtgggttagtttaacttctt 40285737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 280
Target Start/End: Complemental strand, 2622446 - 2622378
Alignment:
Q  212 attggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattta 280  Q
    ||||||||| ||||| ||||||||||||||||  | |||||| |||||||||||||| ||| |||||||    
T  2622446 attggcttgggacctgggagtgtgctcctcctccatgtctcaggttcgattctctctggtgccaattta 2622378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 279
Target Start/End: Complemental strand, 37980219 - 37980132
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||||||  |||||| | |||||||| ||||| ||||||||||||| ||  |||||||| ||||||||||| | |||||||||||    
T  37980219 cacttgggttggcctggtgatgttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcgattctccccagtgtcaattt 37980132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 279
Target Start/End: Original strand, 38869788 - 38869860
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||||||||| || || ||||||||||||||||  |||||||| ||||||||| |||| ||| ||||||    
T  38869788 gtggtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccctctggtgccaattt 38869860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 9693527 - 9693460
Alignment:
Q  234 tgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||  |||||||| ||||||||| |||||||||||||||   |||||||||||| ||||||    
T  9693527 tgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttgggtgggctaatttaccttctt 9693460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 191 - 294
Target Start/End: Complemental strand, 43623516 - 43623413
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaa 290  Q
    ||||||||||  ||| ||| ||||| |||| || |  ||||||||||||||||||| |||||| |||||||||||| ||||  |||||||  |||||||     
T  43623516 cacttgggttagtctagtgatattgacttgagatcagggagtgtgctcctccttgaagtctcaggttcgattctctatagtagcaatttaggtgggctag 43623417  T
Q  291 ttta 294  Q
    ||||    
T  43623416 ttta 43623413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 265
Target Start/End: Original strand, 46295100 - 46295175
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||||| ||||| |||||| || |||||||| ||| | ||||||||||||||||  |||||||| |||||||||||    
T  46295100 ccacttaggttggtctggtagtgttggcttgggacattggagtgtgctcctcctcaaggtctcaggttcgattctc 46295175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 49262740 - 49262653
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    |||||||| ||||| ||| |  ||||||||||||  ||||||||||| ||||||||||| | |||| |||||||  ||||||||||||    
T  49262740 gtggtattcgcttgggacttgagagtgtgctccttgttgaggtctcaggttcgattctccccagtgccaatttaggtgggctaattta 49262653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 247 - 301
Target Start/End: Original strand, 18525420 - 18525474
Alignment:
Q  247 ggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||| |||||||||||||  ||||||||||| |||| |||||||||||||||    
T  18525420 ggtctcatgttcgattctctccggtgtcaatttagatggactaatttaacttctt 18525474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 266
Target Start/End: Complemental strand, 30557344 - 30557267
Alignment:
Q  188 atccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctct 266  Q
    |||||||||| ||| ||||||||||||| |||| ||| |||||||||||||||  | |||| |||| ||||||||||||    
T  30557344 atccacttgg-ttggtctggtggtattgacttgggacgtaggagtgtgctccttttcgagggctcatgttcgattctct 30557267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 30938275 - 30938217
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||||||||| ||| || || |||||||||||||||| ||||||||| |||||||||||    
T  30938275 gtggtattggtttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattctc 30938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 37443705 - 37443806
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  || |||||||||||||| || || ||||||| ||||||   ||||| ||| |||||||| ||||| ||| |||||||  |||||||    
T  37443705 ccacttgggttgacctagtggtattggcttgggatctgggagtgtactcctc---gaggtttcatgttcgattatctctggtgccaatttatgtgggcta 37443801  T
Q  290 attta 294  Q
    |||||    
T  37443802 attta 37443806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 277
Target Start/End: Complemental strand, 52254480 - 52254390
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaat 277  Q
    |||||||||| |||| |||| |||||||| |||| ||  |  ||||||||||||||||||||| ||| ||| ||||||||| |||| ||||    
T  52254480 aatccacttgagttggtctgatggtattgacttgggatatgagagtgtgctcctccttgaggtttcaggttagattctctccagtgccaat 52254390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 4911304 - 4911255
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcct 240  Q
    ||||||||||| |||||||||||| ||||| ||| |||||||||||||||    
T  4911304 cacttgggttggtctggtggtattagcttgggacttaggagtgtgctcct 4911255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 5795482 - 5795393
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||||||| ||||||||| ||| ||||  |||| ||||| ||||||||||  |||||||| ||| ||||||| | |||| ||||||    
T  5795482 ccacttgggttggtctggtggtgttgacttggcaccttggagtatgctcctcctcaaggtctcaggtttgattctccccagtgccaattt 5795393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 8325452 - 8325363
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||  | |||||| |||||||| ||||| ||||||||||| ||||  |||||| | ||||||||||| |  ||||||||||    
T  8325452 ccacttgggttgggccggtggtgttggcttgagaccttggagtgtgctcatcctcaaggtcttaggttcgattctccccggtgtcaattt 8325363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 22096626 - 22096577
Alignment:
Q  245 gaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    ||||||||| ||||||||||| |||||| |||||||| ||||||||||||    
T  22096626 gaggtctcaggttcgattctccctagtgccaatttaagtgggctaattta 22096577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 301
Target Start/End: Complemental strand, 27105063 - 27104990
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||| ||||| ||| | |||| | |||||||||||||  |||||||||| | |||||||||||||||||||    
T  27105063 ggagtgtactccttcttaaagtctgaggttcgattctctccggtgtcaatttgagtgggctaatttaacttctt 27104990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 301
Target Start/End: Complemental strand, 3607032 - 3606984
Alignment:
Q  253 aagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||| | ||||||||||||||  |||||||||||||||||||    
T  3607032 aagttcgattccccctagtgtcaatttaggtgggctaatttaacttctt 3606984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 190 - 266
Target Start/End: Original strand, 33619209 - 33619285
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctct 266  Q
    ||||||||||||   |||||||||||||||  || || |||| ||| ||||||||||||||| | ||||||||||||    
T  33619209 ccacttgggttgccttggtggtattggcttaggatctgggagcgtggtcctccttgaggtcttaggttcgattctct 33619285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 205 - 301
Target Start/End: Original strand, 51954132 - 51954228
Alignment:
Q  205 tggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||| |||| |||| ||| | ||||| |||||||||| ||||||||| ||| |||| ||||  ||||||||||   |||||||||||| ||||||    
T  51954132 tggtggcattgacttgggacttgggagtatgctcctcctcgaggtctcaggtttgattatctccggtgtcaatttgggtgggctaatttagcttctt 51954228  T

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Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 294
Target Start/End: Original strand, 4688579 - 4688670
Alignment:
Q  203 tctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    |||||||||||||||||| ||||| ||| |||| ||||||||||||| ||| | | |||| || | |||| |||||||  |||| |||||||    
T  4688579 tctggtggtattggcttgggacctgggaatgtgatcctccttgaggtttcaggattgattatccccagtgccaatttaggtgggttaattta 4688670  T

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Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 12793980 - 12793873
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    |||||||| ||| ||| |||||||||  || ||  |||||||||| |||  || || | |||||||||||||||| ||| |||||||  |||||||||||    
T  12793980 ttgggttggtctagtgatattggcttcggatctgtgagtgtgctcttccacgaagtattaagttcgattctctctggtgccaatttaggtgggctaattt 12793881  T
Q  294 aacttctt 301  Q
    | ||||||    
T  12793880 agcttctt 12793873  T

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Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 19229276 - 19229206
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    ||||||||  |||||||||||||| || ||| ||| | |||||||||||| ||||||||| |||||||||||    
T  19229276 ttgggttggcctggtggtattggcctgggacttagaa-tgtgctcctcctcgaggtctcaggttcgattctc 19229206  T

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Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 281
Target Start/End: Complemental strand, 19680861 - 19680770
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaa 281  Q
    |||||||| |||  || |||||||| ||||| ||| | ||||||||||| ||||  |||||| | |||||||||||||| ||| ||||||||    
T  19680861 ccacttggattggcctagtggtattcgcttgggacttgggagtgtgctcttcctcaaggtcttaggttcgattctctctggtgccaatttaa 19680770  T

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Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 265
Target Start/End: Original strand, 20608925 - 20609000
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||||||||||| |||| ||||||||||||| || |  |||||||| | ||| |  ||||||||||||||||||||    
T  20608925 ccacttgggttgatctgatggtattggcttgagatccgggagtgtgtttctcatcaaggtctcaagttcgattctc 20609000  T

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Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 289
Target Start/End: Original strand, 21344820 - 21344918
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  ||| || | |||||||| ||||| ||||||||||||| ||  |||||||| |||| |||||| | ||||||||||||  |||||||    
T  21344820 ccacttgggttggcctgatgatgttggcttgggaccttggagtgtgctcct-ctcaaggtctcatgttcaattctccccagtgtcaatttaggtgggcta 21344918  T

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Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 43124667 - 43124734
Alignment:
Q  234 tgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||| ||||||| | |||||||| |||  ||||||||||| | |||||||||||| ||||||    
T  43124667 tgctcctcctcgaggtcttaggttcgattttcttcagtgtcaatttgagtgggctaatttagcttctt 43124734  T

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Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 265
Target Start/End: Original strand, 47044720 - 47044795
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||||||| |||  |||||||||||| |||| || ||  |||| |||||||||| ||||||||| |||||||||||    
T  47044720 ccacttggattggcctggtggtattgacttgggatctgagagtttgctcctcctcgaggtctcaggttcgattctc 47044795  T

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Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 301
Target Start/End: Original strand, 47230523 - 47230629
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    ||||| || |||||||||| ||||||| ||| |  ||||||||||||| | || ||||||| ||| ||||| ||||||  |||||||  |||||||||||    
T  47230523 ttgggatggtctggtggtactggcttgagacatgtgagtgtgctcctcatcgaagtctcaaattcaattct-tctagtaccaatttaggtgggctaattt 47230621  T
Q  294 aacttctt 301  Q
    | ||||||    
T  47230622 atcttctt 47230629  T

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Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 9241098 - 9241028
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcga 260  Q
    ||||||||||||  ||||||||||||||||| || || | ||||||||||| || ||||||| | ||||||    
T  9241098 ccacttgggttggcctggtggtattggcttgggatctggtagtgtgctcctgctcgaggtctgaggttcga 9241028  T

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Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 12798687 - 12798765
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctct 268  Q
    ||||||||||||  |  |||||||||| ||| || || |||||||||| ||||| ||||| ||| ||||||||||||||    
T  12798687 ccacttgggttgaccgagtggtattggtttgagatctgggagtgtgctgctcctcgaggtttcaggttcgattctctct 12798765  T

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Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 229 - 299
Target Start/End: Original strand, 21375819 - 21375889
Alignment:
Q  229 gagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttc 299  Q
    |||||||||||||||  || |||||  ||||||||| ||||||||||||||  ||||| ||||||| ||||    
T  21375819 gagtgtgctcctcctcaagctctcagattcgattctttctagtgtcaatttggatgggttaatttagcttc 21375889  T

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Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 195 - 301
Target Start/End: Original strand, 34075516 - 34075621
Alignment:
Q  195 tgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    ||||||| |||||||||||||| ||| || ||| || ||| ||||| ||  |||||||| ||| |||||||||| ||  ||||||| |||| ||||||||    
T  34075516 tgggttggtctggtggtattggtttgagatctatgaatgtactccttctcaaggtctcaggttagattctctct-gtaccaatttagatggactaattta 34075614  T
Q  295 acttctt 301  Q
     ||||||    
T  34075615 gcttctt 34075621  T

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Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 264
Target Start/End: Complemental strand, 41347036 - 41346962
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattct 264  Q
    ||||||||||||  ||| ||||||||| ||| || || ||||| |||||||||| || |||||| ||||||||||    
T  41347036 ccacttgggttggcctgatggtattggtttgagatctgggagtatgctcctcctcgaagtctcaggttcgattct 41346962  T

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Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 51622521 - 51622599
Alignment:
Q  223 acctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||| ||||||||||||||||  |||||||| |||||| ||||||| ||| ||||||   ||||| |||||| ||||||    
T  51622521 accttggagtgtgctcctcctcaaggtctcaggttcgactctctctggtgccaatttgggtgggccaatttagcttctt 51622599  T

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Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 10048000 - 10048061
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctct 268  Q
    |||||||||||||| |||||| |||| ||||||| ||   ||||||| ||||||||||||||    
T  10048000 gtggtattggcttgggacctaagagtatgctccttctcatggtctcaggttcgattctctct 10048061  T

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Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 294
Target Start/End: Original strand, 13215091 - 13215192
Alignment:
Q  193 cttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatt 292  Q
    ||||||||| ||| || ||||||| ||| || ||  ||||||||| ||| | ||||||||||||| ||||||| || |  |||||||| |||| ||||||    
T  13215091 cttgggttgatctagtagtattggtttgagatctgtgagtgtgcttctcttcgaggtctcaagtttgattctccctggcttcaatttagatggactaatt 13215190  T
Q  293 ta 294  Q
    ||    
T  13215191 ta 13215192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 19112929 - 19112986
Alignment:
Q  208 tggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||||||| |||| |||||||||||||||||||| | ||| | ||| |||||||||||    
T  19112929 tggtattgacttgagacctaggagtgtgctcctcttcgagttatcaggttcgattctc 19112986  T

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Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 301
Target Start/End: Original strand, 51969058 - 51969131
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||||||  |||| ||| ||||  |||||||| ||| ||||||  |||| |||||||||||||||    
T  51969058 ggagtgtgctcctcctcaaggtttcaggttcatttctctctggtgccaatttggatggactaatttaacttctt 51969131  T

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Target: chr1 (Bit Score: 65; Significance: 3e-28; HSPs: 82)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 2219975 - 2220079
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||||||||||||||||||||||||||  ||||   |||||||| ||||| ||||||||| ||||||||||||| | |||||||||||||||||||    
T  2219975 ccacttgggttgttctggtggtattggcttggaacctgaaagtgtgcttctcctcgaggtctcaggttcgattctctccaatgtcaatttaaatgggcta 2220074  T
Q  290 attta 294  Q
    |||||    
T  2220075 attta 2220079  T

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Target: chr1; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 11068912 - 11068805
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    |||||||| ||||||||||||| |||| || | ||||||||||||||| |||||  ||||  ||| |||||||| |||||||||||||||||||||||||    
T  11068912 ttgggttgatctggtggtattgacttgggatccaggagtgtgctcctctttgagacctcagattcaattctctccagtgtcaatttaaatgggctaattt 11068813  T
Q  294 aacttctt 301  Q
    | ||||||    
T  11068812 agcttctt 11068805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 40257402 - 40257513
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  ||||||||||||||||| ||||| |||||||||||||||| |||||||||||||| ||||| ||  ||||||||||   |||||||    
T  40257402 ccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggtctcaagttcaattctatccggtgtcaatttgggtgggcta 40257501  T
Q  290 atttaacttctt 301  Q
     |||| ||||||    
T  40257502 gtttagcttctt 40257513  T

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Target: chr1; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 191 - 301
Target Start/End: Complemental strand, 24047174 - 24047064
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaa 290  Q
    ||||||||||| |||  ||||||||||||| ||| | |||||||||||||||| ||||| ||||||||||||||| | |||| |||||||  | ||||||    
T  24047174 cacttgggttggtctcatggtattggcttgagacttgggagtgtgctcctcctcgaggtttcaagttcgattctccccagtgccaatttaggttggctaa 24047075  T
Q  291 tttaacttctt 301  Q
    |||||||||||    
T  24047074 tttaacttctt 24047064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 207 - 301
Target Start/End: Complemental strand, 25494125 - 25494031
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||| || |||||||| |||| ||||| |||||||| |||||| ||||| |||||| ||||||| ||||||||||||||||||||    
T  25494125 gtggtattggcttgggatctaggagtttgcttctcctcgaggtctcgagttcgcttctccctagtgacaatttagatgggctaatttaacttctt 25494031  T

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Target: chr1; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 40814444 - 40814377
Alignment:
Q  227 aggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||    
T  40814444 aggagtgtgctcatccttgaggtttcaggttcgattctctctagtgtcaatttaagtgggctaattta 40814377  T

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Target: chr1; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 44961768 - 44961879
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||||||| || ||||||||| ||||| ||  || |||||||||||||||   ||||||| |||||||||||||||||||||||||   |||||||    
T  44961768 ccacttgggttggtcaggtggtattagcttgagatttaagagtgtgctcctcctcagggtctcaggttcgattctctctagtgtcaatttgggtgggcta 44961867  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  44961868 atttagcttctt 44961879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 207 - 301
Target Start/End: Complemental strand, 52336830 - 52336736
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||| || || ||||||||||||||||| || ||||| |||||||| ||||| ||||||||||  |||||||||||||| |||||    
T  52336830 gtggtattggcttgggatctgggagtgtgctcctccttaagatctcaggttcgattatctctggtgtcaatttggatgggctaatttaatttctt 52336736  T

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Target: chr1; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 191 - 280
Target Start/End: Complemental strand, 17745328 - 17745239
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattta 280  Q
    |||||||||||  || |||||||||||||| |||||  | ||||||||||||| ||||||||| |||||||||||||| |||||||||||    
T  17745328 cacttgggttggcctagtggtattggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgattctctctggtgtcaattta 17745239  T

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Target: chr1; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 27476826 - 27476733
Alignment:
Q  208 tggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||| ||| |||||||||||||||||| ||| ||||||||| |||||||||| ||| | |||||  |||||||||||| ||||||    
T  27476826 tggtattggcttgggacttaggagtgtgctcctcctcgagatctcaagtttgattctctctggtgccgatttaggtgggctaatttagcttctt 27476733  T

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Target: chr1; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 37400279 - 37400351
Alignment:
Q  192 acttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattct 264  Q
    |||||||||| |||||||||||||||||| |||||   ||||||||||||||| |||||||||||||||||||    
T  37400279 acttgggttggtctggtggtattggcttgagacctgaaagtgtgctcctccttaaggtctcaagttcgattct 37400351  T

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Target: chr1; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 50901584 - 50901695
Alignment:
Q  190 ccacttgggttgttctggtggta-ttggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggct 288  Q
    ||||||||||||  || |||||| |||||||| ||||| | |||||||||||||| |||||||||| |||||||||||| |||| |||||||  ||||||    
T  50901584 ccacttgggttggcctagtggtaattggcttgggacctggtagtgtgctcctcctcgaggtctcaaattcgattctctc-agtgccaatttaggtgggct 50901682  T
Q  289 aatttaacttctt 301  Q
    |||||| ||||||    
T  50901683 aatttagcttctt 50901695  T

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Target: chr1; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 1094528 - 1094639
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||||||| | || |||||||| ||||  ||||  ||||||||||||||  |||||||||| ||||||||||||  ||| |||||||  |||||||    
T  1094528 ccacttgggttggtttgttggtattgacttggaacctgtgagtgtgctcctccacgaggtctcaaattcgattctctccggtgccaatttaggtgggcta 1094627  T
Q  290 atttaacttctt 301  Q
    ||||||||||||    
T  1094628 atttaacttctt 1094639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 194 - 301
Target Start/End: Original strand, 6122801 - 6122908
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    ||||||||  || ||||||| |||||| ||| | ||||||||||||||||  |||||||| ||||||||| |||||||||||||||   |||||||||||    
T  6122801 ttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttgggtgggctaattt 6122900  T
Q  294 aacttctt 301  Q
    | ||||||    
T  6122901 agcttctt 6122908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 16893397 - 16893508
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  ||| ||||||||||||| ||  | ||||||| |||||||| ||||||||| |||||||| ||||  |||||||||| | |||||||    
T  16893397 ccacttgggttgacctgttggtattggcttgagatttgggagtgtactcctcctcgaggtctcaggttcgattttctccggtgtcaatttgagtgggcta 16893496  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  16893497 atttagcttctt 16893508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 31794337 - 31794226
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  || |||||||||||||| ||| | ||||||||||||||||  ||||||  |||||||||| |||| ||||||||||   |||||||    
T  31794337 ccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctagagttcgattccctctggtgtcaatttgggtgggcta 31794238  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  31794237 atttagcttctt 31794226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 33700846 - 33700735
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  || ||||||||||||||  | || ||||||||||||||||  |||||||| |||||||||||||| ||| ||||||||  ||| ||    
T  33700846 ccacttgggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttaagggggtta 33700747  T
Q  290 atttaacttctt 301  Q
     |||||||||||    
T  33700746 gtttaacttctt 33700735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 44126398 - 44126509
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  |||||||||||| | || ||||| |||||||||||||||  |||||||||  || |||||||||||||| |||||||  | |||||    
T  44126398 ccacttgggttggcctggtggtattgacctgggacctgggagtgtgctcctccacgaggtctcagatttgattctctctagtgccaatttaggtaggcta 44126497  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  44126498 atttagcttctt 44126509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 19528407 - 19528325
Alignment:
Q  183 aatcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||||| ||||||||||||  ||||||||||||||||| || ||| |||||||||||||||  |||||||| |||||||||||    
T  19528407 aatcaacccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgattctc 19528325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 15786393 - 15786304
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||||||| ||| || ||||||||||| || || ||||||||||||||||  |||||||| |||||||||||| | ||||||||||    
T  15786393 ccacttgggttggtctagtagtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgtcaattt 15786304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 21547551 - 21547442
Alignment:
Q  192 acttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaat 291  Q
    ||||||||||  || |||||||||||||| ||| | |||| ||||||||||| ||||| ||| ||||||||||||||  || |||||||  ||||||| |    
T  21547551 acttgggttggcctagtggtattggcttgggacatgggagggtgctcctcctcgaggtttcaggttcgattctctctgatgccaatttaggtgggctagt 21547452  T
Q  292 ttaacttctt 301  Q
    ||||||||||    
T  21547451 ttaacttctt 21547442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 206 - 266
Target Start/End: Complemental strand, 31383855 - 31383795
Alignment:
Q  206 ggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctct 266  Q
    ||||||||||||||| ||||| |||||||||||||||||| ||||||| ||||||||||||    
T  31383855 ggtggtattggcttgggacctgggagtgtgctcctccttggggtctcaggttcgattctct 31383795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 19940945 - 19940834
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||||||| ||||||||| || ||||| | ||| ||||||||||||||||| |||||||| ||| |||||||||  ||| |||||||  ||||||     
T  19940945 ccacttgggttggtctggtggtgttagcttgggtccttggagtgtgctcctccttaaggtctcaggtttgattctctccggtgccaatttatgtgggctg 19940846  T
Q  290 atttaacttctt 301  Q
     |||| ||||||    
T  19940845 gtttagcttctt 19940834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 52116850 - 52116743
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    ||||||||  ||||||||||||||||| ||| | ||||||||||||||||  | |||||| |||| |||||| |||||| ||||| |  |||||||||||    
T  52116850 ttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcaattctccctagtgccaattaaggtgggctaattt 52116751  T
Q  294 aacttctt 301  Q
    | ||||||    
T  52116750 agcttctt 52116743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 1690150 - 1690080
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcga 260  Q
    |||||||  ||| |||||||||||||||||| ||||| ||||| || ||||||||||||||||||||||||    
T  1690150 ccacttgaattggtctggtggtattggcttgggacctgggagtctgttcctccttgaggtctcaagttcga 1690080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 207 - 301
Target Start/End: Original strand, 36124853 - 36124947
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||| |||| |||||  ||||||||||||||||||||||||||||| ||| ||  |||| | |||||||  |||||||||||| ||||||    
T  36124853 gtggtattgacttgggacctgagagtgtgctcctccttgaggtctcaagtttgatccttcctagcgccaatttaggtgggctaatttagcttctt 36124947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 42949332 - 42949254
Alignment:
Q  223 acctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||||||||||| |||||||||  || |||||||||  ||| |||||||| |||||||||||| ||||||    
T  42949332 acctaggagtgtgctcctcctcgaggtctcatatttgattctctccggtgacaatttaagtgggctaatttagcttctt 42949254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 9165268 - 9165179
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||  || |||||||||||||| ||||| ||||||||||||||||  | |||||| |||| ||||||||| ||| ||||||    
T  9165268 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttcaattctctctggtgccaattt 9165179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 301
Target Start/End: Original strand, 28411347 - 28411444
Alignment:
Q  204 ctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||| |||| ||  |  ||||||||||||| |||||||||||  ||| ||||||||| ||| ||||||||||| ||| ||||||||||||    
T  28411347 ctggtggtattgacttgggatatgagagtgtgctcctctttgaggtctcagattcaattctctctggtgccaatttaaatgagctcatttaacttctt 28411444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 217 - 301
Target Start/End: Original strand, 3799936 - 3800020
Alignment:
Q  217 cttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||| ||| ||||| |||||||||||| || || ||| |||||||||||||||||| |||||||  |||||||||||| ||||||    
T  3799936 cttgagacttaggaatgtgctcctcctcgaagtttcaggttcgattctctctagtgccaatttaggtgggctaatttagcttctt 3800020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 189 - 301
Target Start/End: Original strand, 17410233 - 17410345
Alignment:
Q  189 tccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggct 288  Q
    |||| ||||||||  || |||||||||| ||| || || |||||||| ||||||| ||| |||||||||||||||||  |  || ||||||| || ||||    
T  17410233 tccaattgggttggcctagtggtattggtttgggatctgggagtgtggtcctcctcgagatctcaagttcgattctcctttatgccaatttagataggct 17410332  T
Q  289 aatttaacttctt 301  Q
    |||||||||||||    
T  17410333 aatttaacttctt 17410345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 26232462 - 26232398
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtct 251  Q
    ||||||||||||||| ||| |||||||||||||| || || ||||||||||||| ||||||||||    
T  26232462 aatccacttgggttggtctagtggtattggcttgagatctgggagtgtgctcctgcttgaggtct 26232398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 205 - 301
Target Start/End: Complemental strand, 42983432 - 42983336
Alignment:
Q  205 tggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||| |||| || || |||||||| ||||||||||||||  | |||||||||||||  ||| |||||||| ||| |||||||| ||||||    
T  42983432 tggtggtattgacttgagatctgggagtgtggtcctccttgaggtccgaggttcgattctctcaggtgccaatttaagtggactaatttagcttctt 42983336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 281
Target Start/End: Original strand, 4566551 - 4566642
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaa 281  Q
    ||||||||||||  || ||| ||||||||||  |||| ||||||||||||||||   ||||||| ||||||||||||||  |||||||||||    
T  4566551 ccacttgggttggcctagtgatattggcttggaacctgggagtgtgctcctcctcagggtctcaggttcgattctctctgatgtcaatttaa 4566642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 194 - 301
Target Start/End: Original strand, 10526830 - 10526937
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    |||||||| ||  |||||||||||||| ||||| ||||| ||||||||||  ||||||||  ||||||||||||| | ||||||||   |||| ||||||    
T  10526830 ttgggttggtccagtggtattggcttgggacctgggagtttgctcctcctcaaggtctcagattcgattctctctggagtcaatttgggtgggttaattt 10526929  T
Q  294 aacttctt 301  Q
    | ||||||    
T  10526930 agcttctt 10526937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 194 - 301
Target Start/End: Original strand, 11063563 - 11063670
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    |||||||| ||| |||||||||||||| |||||   |||||| |||||||  |||||| | |||||||||||||||||| |||||| || ||| || |||    
T  11063563 ttgggttgatctagtggtattggcttgggacctgaaagtgtgttcctcctcaaggtcttaggttcgattctctctagtgccaatttgaaggggttagttt 11063662  T
Q  294 aacttctt 301  Q
    | ||||||    
T  11063663 agcttctt 11063670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 12587285 - 12587383
Alignment:
Q  202 ttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||| ||||| |||| || ||  ||||||||||||||| ||||||||| |||||||||||||  ||| |||||||  |||||||||||| ||||||    
T  12587285 ttctggtgatattgacttgggatctgtgagtgtgctcctcctcgaggtctcaggttcgattctctccggtg-caatttaggtgggctaatttagcttctt 12587383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 18037686 - 18037575
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||||||| |||| || |||||| ||| ||| | |||||||||||||  | ||| |||||||||||||||||||  ||| | |||||  |||||||    
T  18037686 ccacttgggttggtctgatgatattggtttgggacttgggagtgtgctccttttcgagatctcaagttcgattctctccggtgccgatttaggtgggcta 18037587  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  18037586 atttagcttctt 18037575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 281
Target Start/End: Original strand, 30689015 - 30689106
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaa 281  Q
    |||||| |||||  ||| ||||||||||||  ||||| ||||| |||||||||||||||||||| |||| |||||| | |||| ||||||||    
T  30689015 ccacttaggttgccctgatggtattggcttaggacctgggagtttgctcctccttgaggtctcatgttcaattctccccagtgccaatttaa 30689106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 216 - 294
Target Start/End: Original strand, 12370192 - 12370270
Alignment:
Q  216 gcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    ||||| ||||| |||||||||||||||| ||||||||| ||| |||||||||  || ||||||||||  ||||||||||    
T  12370192 gcttgggacctgggagtgtgctcctcctcgaggtctcatgtttgattctctccggtatcaatttaaacaggctaattta 12370270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 36371473 - 36371551
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctct 268  Q
    ||||||||||||  || ||||||||||||||  |||| ||||||||||||||||  |||||| | ||||||||||||||    
T  36371473 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctct 36371551  T

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Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 188 - 301
Target Start/End: Complemental strand, 6948152 - 6948039
Alignment:
Q  188 atccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggc 287  Q
    |||| ||||||||| || ||||||||| | |||  | || |||||||||| ||||| ||||||||| |||| |||||| |  ||||||||||| ||| |     
T  6948152 atccgcttgggttggtcgggtggtattagtttgacatctgggagtgtgctgctcctcgaggtctcatgttcaattctcaccggtgtcaatttagatgagt 6948053  T
Q  288 taatttaacttctt 301  Q
    ||||||||||||||    
T  6948052 taatttaacttctt 6948039  T

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Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 279
Target Start/End: Original strand, 2799882 - 2799954
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||| |||||| || || ||||||||||||||||  |||||||| |||||||||||||| ||| ||||||    
T  2799882 gtggtataggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 2799954  T

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Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 279
Target Start/End: Complemental strand, 8177238 - 8177166
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||||||||| || || ||||||||||||||||  |||| ||| |||||||||||||| ||| ||||||    
T  8177238 gtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgccaattt 8177166  T

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Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 9224779 - 9224855
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctc 267  Q
    ||||||||||| |||||||||||||  ||| || ||  |||| |||| ||||||||||||||| |||||||||||||    
T  9224779 cacttgggttggtctggtggtattgctttgagatctgagagtatgcttctccttgaggtctcaggttcgattctctc 9224855  T

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Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 301
Target Start/End: Original strand, 9879456 - 9879552
Alignment:
Q  205 tggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||| ||||||||||| || ||  |||||| ||| ||||||||||||||  ||||||| |||||  |||||||||   |||||||||||||||||||    
T  9879456 tggttgtattggcttgggatctgagagtgtactcttccttgaggtctcagattcgattatctcttatgtcaatttgggtgggctaatttaacttctt 9879552  T

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Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 17439958 - 17440010
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattta 280  Q
    |||||||||||||||| ||||||||| ||| ||||||||| ||||||||||||    
T  17439958 ggagtgtgctcctcctcgaggtctcatgtttgattctctccagtgtcaattta 17440010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 18459305 - 18459193
Alignment:
Q  190 ccacttgggttgttctggtggta-ttggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggct 288  Q
    |||||||||||| ||| |||||| |||||||| ||| | |||||||||||||||||||||||| |  || |||||||||  |||  ||||| | |||| |    
T  18459305 ccacttgggttggtctagtggtaattggcttgggacttgggagtgtgctcctccttgaggtcttagatttgattctctcatgtgctaatttgagtgggat 18459206  T
Q  289 aatttaacttctt 301  Q
    || ||||||||||    
T  18459205 aaattaacttctt 18459193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 28283573 - 28283645
Alignment:
Q  229 gagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||| || ||||||| |||||| |||||||||||||| |||||||||||  | | |||||||||||||||    
T  28283573 gagtgtgttcttccttgatgtctcaggttcgattctctctggtgtcaatttatgtagtctaatttaacttctt 28283645  T

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Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 51814497 - 51814601
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  ||| |||||||| |||| || ||  |||||||||||||||  |||||||| |||||||||||||  ||| ||||||   |||||||    
T  51814497 ccacttgggttggcctgatggtattgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgattctctccggtgccaatttgggtgggcta 51814596  T
Q  290 attta 294  Q
    |||||    
T  51814597 attta 51814601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 211 - 290
Target Start/End: Original strand, 31049637 - 31049716
Alignment:
Q  211 tattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaa 290  Q
    |||||||||| || |||||||||||||||||||  || |||||  ||||||||||||| |||||| ||||  ||||||||    
T  31049637 tattggcttgggatctaggagtgtgctcctcctaaagatctcatcttcgattctctctggtgtcagtttagctgggctaa 31049716  T

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Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 37046988 - 37047039
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctc 241  Q
    |||||||||||| ||||||||| |||||||| ||||| ||||||||||||||    
T  37046988 ccacttgggttggtctggtggtgttggcttgggaccttggagtgtgctcctc 37047039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 247 - 294
Target Start/End: Complemental strand, 42858653 - 42858606
Alignment:
Q  247 ggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    ||||||| |||||||||||||| |||||||||| ||||||||||||||    
T  42858653 ggtctcaggttcgattctctctggtgtcaatttgaatgggctaattta 42858606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 194 - 281
Target Start/End: Original strand, 51703786 - 51703873
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaa 281  Q
    |||||||| ||| ||||||||||||||  | || ||||||||||||||||  | || ||| |||||||||||||| || |||||||||    
T  51703786 ttgggttggtctagtggtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggttcgattctctctggtatcaatttaa 51703873  T

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Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 52029994 - 52029935
Alignment:
Q  206 ggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||||||||| |||| ||||||||||||||||||| ||  |||||||| |||||||||||    
T  52029994 ggtggtattgacttgagacctaggagtgtgctccttctcaaggtctcaggttcgattctc 52029935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 265
Target Start/End: Original strand, 4824975 - 4825049
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    ||||||||||| |||| |||| |||||||| ||||| |||||||||||||| |  |||||||| ||| |||||||    
T  4824975 cacttgggttggtctgatggtgttggcttgggaccttggagtgtgctcctcttcaaggtctcaggtttgattctc 4825049  T

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Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 229 - 279
Target Start/End: Original strand, 8904456 - 8904506
Alignment:
Q  229 gagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||||||||||  ||||||||||||||||||||||| ||| ||||||    
T  8904456 gagtgtgctcctcctcaaggtctcaagttcgattctctctggtgccaattt 8904506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 298
Target Start/End: Original strand, 12662287 - 12662393
Alignment:
Q  192 acttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaat 291  Q
    |||||||||| |||| |||||||| |||| ||    | |||||||||||||| || |||||| |||||||| |||||| || |||||||  ||| |||||    
T  12662287 acttgggttggtctgatggtattgacttgtgatacggaagtgtgctcctcctcgatgtctcaggttcgattatctctaatgccaatttaggtggactaat 12662386  T
Q  292 ttaactt 298  Q
    |||||||    
T  12662387 ttaactt 12662393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 301
Target Start/End: Original strand, 50919974 - 50920068
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||| ||||  ||||  |||||||||| ||||| |||| ||| |||||||||||||| |||||||||| || ||| || |||| ||||||    
T  50919974 gtggtattgacttgaaacctgagagtgtgctcatccttaaggtttcaggttcgattctctctggtgtcaatttgaaggggttagtttagcttctt 50920068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 299
Target Start/End: Original strand, 952514 - 952623
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||| |||| ||||||||| |||||||| ||||| ||||||||||| ||||  | |||||| ||| ||||||| |   ||||||||||  |||| ||    
T  952514 ccacttgagttggtctggtggtgttggcttgggacctgggagtgtgctcatcctcaaagtctcaggttagattctccccgatgtcaatttaggtgggtta 952613  T
Q  290 atttaacttc 299  Q
    ||||| ||||    
T  952614 atttagcttc 952623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 301
Target Start/End: Complemental strand, 1600327 - 1600254
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||||||| | || ||| |||||||||||||| ||||||||||  |||| |||| ||| ||||||    
T  1600327 ggagtgtgctcctccttaaagtttcaggttcgattctctctggtgtcaatttggatggactaacttagcttctt 1600254  T

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Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 280
Target Start/End: Original strand, 6650615 - 6650688
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattta 280  Q
    |||||||||||||| || |  ||||| ||||||||||  | |||||| |||||||||||||| |||||||||||    
T  6650615 gtggtattggcttgggatcggggagtatgctcctcctcaatgtctcaggttcgattctctctggtgtcaattta 6650688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 264
Target Start/End: Original strand, 21694444 - 21694520
Alignment:
Q  185 tcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattct 264  Q
    |||| ||||||||||||  ||||||||||||||||| ||| | ||||||||||||||    |||||||| ||||||||||    
T  21694444 tcaacccacttgggttgacctggtggtattggcttgagacttgggagtgtgctcctc---aaggtctcaggttcgattct 21694520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 31605903 - 31605846
Alignment:
Q  208 tggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||| |||||||| ||||| | ||||||||||||||  ||||||||||||||||||||    
T  31605903 tggtgttggcttgggaccttgaagtgtgctcctcctcaaggtctcaagttcgattctc 31605846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 44370911 - 44370842
Alignment:
Q  232 tgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||| | |||||||||| || |||||||||| || ||||||||  || ||||||||||||||||    
T  44370911 tgtgctcctcttcgaggtctcaactttgattctctctggtttcaatttaggtgagctaatttaacttctt 44370842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 9117140 - 9117196
Alignment:
Q  208 tggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattct 264  Q
    |||||| |||||| || || | |||||||||||||||||||||||| ||||||||||    
T  9117140 tggtatgggcttgggatctggaagtgtgctcctccttgaggtctcaggttcgattct 9117196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 265
Target Start/End: Complemental strand, 16170056 - 16169976
Alignment:
Q  185 tcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||| |||||||||||   |||||||||||| |||| ||||| |||||||| |||||||  |||| ||| |||||||||||    
T  16170056 tcaacccacttgggttagcctggtggtattgacttgggacctgggagtgtgttcctcctcaaggtttcaggttcgattctc 16169976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 29056380 - 29056492
Alignment:
Q  190 ccacttgggttgttctggtggtatt-ggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggct 288  Q
    |||||||||||| ||  |||||||| || ||| ||||| ||||||||||| ||||  || | ||| |||||||| |||||  || ||||||||| ||| |    
T  29056380 ccacttgggttggtccagtggtatttggtttgggacctgggagtgtgctcatcctgaagttttcaggttcgattatctctgatgccaatttaaaagggtt 29056479  T
Q  289 aatttaacttctt 301  Q
    |||||||||||||    
T  29056480 aatttaacttctt 29056492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 45235452 - 45235388
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaa 254  Q
    |||||||||||| |||| ||||||||| ||| ||| | |||||||||||||||| ||| ||||||    
T  45235452 ccacttgggttggtctgatggtattggtttgggacttgggagtgtgctcctcctcgagatctcaa 45235388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 47720830 - 47720886
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctcct 243  Q
    |||||| |||||||| ||||||||||||| |||| ||  ||||||||||||||||||    
T  47720830 aatccatttgggttgatctggtggtattgacttgagatataggagtgtgctcctcct 47720886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 47727822 - 47727878
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctcct 243  Q
    |||||| |||||||| ||||||||||||| |||| ||  ||||||||||||||||||    
T  47727822 aatccatttgggttgatctggtggtattgacttgagatataggagtgtgctcctcct 47727878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 15581214 - 15581163
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctc 241  Q
    ||||||||||||  |||||||| |||||||| ||||| ||||||||||||||    
T  15581214 ccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctc 15581163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 25297775 - 25297886
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||||||| ||| ||||||||| |||  || ||  ||||||||||||||| ||||||| | ||| ||||||| |  | |||||||||  |||| ||    
T  25297775 ccacttgggttggtctagtggtattgacttaggatctgagagtgtgctcctcctcgaggtctgaggtttgattctcaccggcgtcaatttaggtgggata 25297874  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  25297875 atttagcttctt 25297886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 26232395 - 26232352
Alignment:
Q  229 gagtgtgctcctccttgaggtctcaagttcgattctctctagtg 272  Q
    ||||||||||||||||||||||||| |||| |||||||| ||||    
T  26232395 gagtgtgctcctccttgaggtctcaggttcaattctctccagtg 26232352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 207 - 301
Target Start/End: Complemental strand, 14787392 - 14787298
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||| |||| |||||  ||||||| | |||||  |||| ||| ||||||||||||||| | ||||||||| |||| || |||| ||||||    
T  14787392 gtggtattgacttgagacctgagagtgtgtttctcctcaaggtgtcaggttcgattctctctaatatcaatttaagtgggttagtttagcttctt 14787298  T

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Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 43445984 - 43446070
Alignment:
Q  208 tggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    |||| |||||||| | ||| ||||||||||||||||  |||||||| ||||||||||| |  ||| |||||| | ||||||| ||||    
T  43445984 tggtgttggcttgggtccttggagtgtgctcctcctcaaggtctcatgttcgattctccccggtgccaatttgagtgggctagttta 43446070  T

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Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 262
Target Start/End: Complemental strand, 1205455 - 1205426
Alignment:
Q  233 gtgctcctccttgaggtctcaagttcgatt 262  Q
    ||||||||||||||||||||||||||||||    
T  1205455 gtgctcctccttgaggtctcaagttcgatt 1205426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 301
Target Start/End: Complemental strand, 7743360 - 7743287
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||| |||||||  ||||||||||||||||| |||  | ||||||||||  |||||||| ||| ||||||    
T  7743360 ggagtgtggtcctcctctaggtctcaagttcgattatctaaaatgtcaatttaggtgggctaacttagcttctt 7743287  T

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Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 265
Target Start/End: Original strand, 12259301 - 12259338
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||||||||||||||| || ||||||||||||||||||    
T  12259301 ggagtgtgctcctcctcgaagtctcaagttcgattctc 12259338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 297
Target Start/End: Complemental strand, 16040538 - 16040469
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaact 297  Q
    ||||||| ||||| || ||| |||||  ||||||| |||   ||||||||||||||||||||||||||||    
T  16040538 ggagtgtactccttctcgagatctcagattcgattatcttctgtgtcaatttaaatgggctaatttaact 16040469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 260
Target Start/End: Complemental strand, 21184444 - 21184391
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcga 260  Q
    |||||||||||||| |||||  |||||||||||| ||  |||||||||||||||    
T  21184444 gtggtattggcttgggacctgcgagtgtgctccttctgaaggtctcaagttcga 21184391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 28022191 - 28022138
Alignment:
Q  197 ggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtc 250  Q
    |||||| ||||||||||||||||| ||||| ||| |||||| ||||| ||||||    
T  28022191 ggttgtcctggtggtattggcttgggacctgggattgtgcttctcctcgaggtc 28022138  T

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Target: scaffold0258 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 15396 - 15285
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||||||| |||||||||||||||||| ||||| |||||||||||||||| ||||||||| |||||||||||||   || |||||||  |||||||    
T  15396 ccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtgggcta 15297  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  15296 atttagcttctt 15285  T

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Target: chr7 (Bit Score: 61; Significance: 8e-26; HSPs: 86)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 185 - 301
Target Start/End: Complemental strand, 23301680 - 23301564
Alignment:
Q  185 tcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatg 284  Q
    |||| ||||||||||||  |||||||||||| |||| ||| | |||||||||||||||||||||||||||||| |||||||| |||||  ||||| | ||    
T  23301680 tcaacccacttgggttggcctggtggtattgacttgggacttgggagtgtgctcctccttgaggtctcaagtttgattctctttagtgctaatttgagtg 23301581  T
Q  285 ggctaatttaacttctt 301  Q
    | |||||||||||||||    
T  23301580 gactaatttaacttctt 23301564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 185 - 301
Target Start/End: Complemental strand, 20335909 - 20335793
Alignment:
Q  185 tcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatg 284  Q
    |||| |||||||||||| ||| | |||||||||||| ||| | |||||||||||||||| ||||||||| ||||||||||| |   |||||||||  |||    
T  20335909 tcaacccacttgggttggtctagaggtattggcttgggacttgggagtgtgctcctcctcgaggtctcaggttcgattctcaccgatgtcaatttggatg 20335810  T
Q  285 ggctaatttaacttctt 301  Q
    |||||||||||||||||    
T  20335809 ggctaatttaacttctt 20335793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 197 - 301
Target Start/End: Complemental strand, 45229091 - 45228987
Alignment:
Q  197 ggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaac 296  Q
    |||| ||||| ||||||||| ||| |||||||||||||||| || |||||||| | | ||||||||||||| ||||||||||||| |||||||||||| |    
T  45229091 ggttcttctgttggtattggtttgggacctaggagtgtgcttcttcttgaggttttaggttcgattctctccagtgtcaatttaagtgggctaatttagc 45228992  T
Q  297 ttctt 301  Q
    |||||    
T  45228991 ttctt 45228987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 2446311 - 2446422
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||||||| |||| ||||||||||||| ||| | |||||||||||||||| ||| |||||||||||||||||||  ||| | |||||  |||||||    
T  2446311 ccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgagatctcaagttcgattctctccggtgccgatttaggtgggcta 2446410  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  2446411 atttagcttctt 2446422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 189 - 301
Target Start/End: Complemental strand, 15905747 - 15905636
Alignment:
Q  189 tccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggct 288  Q
    |||||||||||||  |||| |||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||||| ||| |||||||||   |||| |    
T  15905747 tccacttgggttggcctggcggtattggcttgggacctgggagtgtgctcctcctt-aggtctcaggttcgattctccctaatgtcaatttgggtgggtt 15905649  T
Q  289 aatttaacttctt 301  Q
    |||||| ||||||    
T  15905648 aatttagcttctt 15905636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 41975937 - 41976001
Alignment:
Q  237 tcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  41975937 tcctcattgaggtctcaagttcgattctctctagtgtcaatttaagtgggctaatttagcttctt 41976001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 26459483 - 26459372
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  || |||||||||||||| ||||| ||||||||||||||||  |||||||| |||||||||||||| ||| |||||| || ||| ||    
T  26459483 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgaaggggtta 26459384  T
Q  290 atttaacttctt 301  Q
     |||| ||||||    
T  26459383 gtttagcttctt 26459372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 30579338 - 30579449
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  ||||||||||||||||| ||||| ||||||| | ||||||  |||||||| |||||||| ||||| ||| |||||||  |||||||    
T  30579338 ccacttgggttggcctggtggtattggcttgagacctgggagtgtccacctcctcaaggtctcaggttcgattttctctggtgccaatttaggtgggcta 30579437  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  30579438 atttagcttctt 30579449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 48771941 - 48772052
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||   |||||||||||||||| || || |||||||||||||||||||||||||| |||||||| || | |||  |||||||  |||||||    
T  48771941 ccacttgggttggcttggtggtattggcttgggatctgggagtgtgctcctccttgaggtctcaggttcgattatcccaagtaccaatttaggtgggcta 48772040  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  48772041 atttagcttctt 48772052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 43215187 - 43215265
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctct 268  Q
    |||||||||||| ||| |||||||||||||| ||||| ||||||||||||||||  |||||||| ||||||||||||||    
T  43215187 ccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctct 43215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 228 - 301
Target Start/End: Original strand, 7309397 - 7309469
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||||| |||||||||||||||||||||||  |||||||||||| |||||||||||| ||||||    
T  7309397 ggagtgtgctcctcctcgaggtctcaagttcgattctctc-cgtgtcaatttaagtgggctaatttagcttctt 7309469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 190 - 265
Target Start/End: Original strand, 22760866 - 22760941
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||  |||||||| |||||||||||    
T  22760866 ccacttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 22760941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 25590614 - 25590725
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  ||| ||||||||||||| || || |||||||||||||||| ||||||||  |||||||| |||   |||||||||| | |||||||    
T  25590614 ccacttgggttgacctgttggtattggcttgagatctgggagtgtgctcctcctcgaggtctcgggttcgattttcttcggtgtcaatttgagtgggcta 25590713  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  25590714 atttagcttctt 25590725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 194 - 301
Target Start/End: Original strand, 43590914 - 43591021
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    ||||||||  ||||||||||||||||| ||| | ||||||||||||||||  | |||||| ||||||||||| |||||| ||||| |  |||||||||||    
T  43590914 ttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaattaaggtgggctaattt 43591013  T
Q  294 aacttctt 301  Q
    | ||||||    
T  43591014 agcttctt 43591021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 23552121 - 23552211
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattta 280  Q
    ||||||||||||  || ||| ||||| |||| ||||| ||||||||||||||||  |||||||||||||||||||||||| || |||||||    
T  23552121 ccacttgggttggcctagtgctattgacttgggacctgggagtgtgctcctcctcaaggtctcaagttcgattctctctaatgccaattta 23552211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 187 - 301
Target Start/End: Complemental strand, 45976999 - 45976885
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatggg 286  Q
    |||||||||||||||  || |||||||||||||| ||||| ||||||||||||||||| |||| | ||||||  || |||||  || |||||||| | ||    
T  45976999 aatccacttgggttggcctagtggtattggcttgtgacctgggagtgtgctcctccttaaggttttaagttcatttatctctgatgccaatttaagtagg 45976900  T
Q  287 ctaatttaacttctt 301  Q
     ||||||||||||||    
T  45976899 ttaatttaacttctt 45976885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 41519335 - 41519227
Alignment:
Q  192 acttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaat 291  Q
    ||||||||||  || ||||||||| |||| ||  ||||||||||||||||||  |||||||| ||||| |||||||| |||||||||||  |||||||||    
T  41519335 acttgggttggcctagtggtattgacttgggatttaggagtgtgctcctcctcaaggtctcaggttcgcttctctct-gtgtcaatttaggtgggctaat 41519237  T
Q  292 ttaacttctt 301  Q
    ||| ||||||    
T  41519236 ttagcttctt 41519227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 15137556 - 15137660
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  ||||||||| || |||| ||  ||||||||||||||||||  |||||||| ||| |||||||||| ||||||||||   |||||||    
T  15137556 ccacttgggttggcctggtggtactgacttgggatttaggagtgtgctcctcctcaaggtctcaggttagattctctctggtgtcaatttgggtgggcta 15137655  T
Q  290 attta 294  Q
    |||||    
T  15137656 attta 15137660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 37473652 - 37473728
Alignment:
Q  225 ctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||| |||||||||||||||||||| ||||||||||| ||| ||||||||||  |||| ||||||| ||||||    
T  37473652 ctaggagtttgctcctccttgaggtctcaggttcgattctccctaatgtcaatttaggtgggttaatttagcttctt 37473728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 24513800 - 24513911
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  || |||||||||||||| ||  | ||||||| || ||||||||||||||| |||||||| || ||  |||||||||   |||||||    
T  24513800 ccacttgggttggcctagtggtattggcttgagatttgggagtgtacttctccttgaggtctcaggttcgattttcactgatgtcaatttgggtgggcta 24513899  T
Q  290 atttaacttctt 301  Q
    ||||||||||||    
T  24513900 atttaacttctt 24513911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 294
Target Start/End: Original strand, 42711962 - 42712065
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaa 290  Q
    |||||||||||   | |||||||| |||||  || | ||||||||||||||||  |||||||| ||||||||||| ||||||||||||||  ||||||||    
T  42711962 cacttgggttggcttagtggtattagcttggtacatgggagtgtgctcctcctcaaggtctcatgttcgattctccctagtgtcaatttaggtgggctaa 42712061  T
Q  291 ttta 294  Q
    ||||    
T  42712062 ttta 42712065  T

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Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 207 - 301
Target Start/End: Original strand, 7721389 - 7721483
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||| ||| ||||| ||||||| ||||||||  |||||||| |||||||||||||| ||||||||||  ||||  ||||||| ||||||    
T  7721389 gtggtattggtttgggacctgggagtgtactcctcctcaaggtctcatgttcgattctctctggtgtcaatttggatggaataatttagcttctt 7721483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 187 - 265
Target Start/End: Complemental strand, 18884481 - 18884403
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    ||||||||||||||| | ||||||||||| |||  ||||| |||||||||| || ||| ||||||||||||||||||||    
T  18884481 aatccacttgggttggtttggtggtattgactttggacctcggagtgtgcttcttcttaaggtctcaagttcgattctc 18884403  T

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Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 207 - 301
Target Start/End: Complemental strand, 24438303 - 24438209
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||| ||| ||| | ||||||||||| | ||| |||| |||  ||||||||||||| |||||||||| |||||||||||||| ||||||    
T  24438303 gtggtattggtttgggacttgggagtgtgctctttcttaaggtttcagattcgattctctctggtgtcaatttgaatgggctaatttagcttctt 24438209  T

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Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 213 - 294
Target Start/End: Original strand, 5934147 - 5934228
Alignment:
Q  213 ttggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    |||||||| || || |||||||||||||||||||||| ||| ||||||||| |||| |||||||||||  ||| ||||||||    
T  5934147 ttggcttgggatctgggagtgtgctcctccttgaggtttcatgttcgattccctctggtgtcaatttaggtggactaattta 5934228  T

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Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 233 - 294
Target Start/End: Complemental strand, 9122178 - 9122117
Alignment:
Q  233 gtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    |||||||||||| |||||||||||| ||||||||||||||| | ||||| ||||||||||||    
T  9122178 gtgctcctcctttaggtctcaagtttgattctctctagtgttagtttaagtgggctaattta 9122117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 301
Target Start/End: Complemental strand, 11721019 - 11720922
Alignment:
Q  204 ctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||||||| ||||| ||| ||||||||||||| |||| |||  |||||||||| | |||| ||||||   |||||||||||| ||||||    
T  11721019 ctggtggtattggcttgggacctgggaatgtgctcctccttaaggtatcagattcgattctccccagtgccaatttgggtgggctaatttagcttctt 11720922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 17041085 - 17040996
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||||||| ||| |||| ||||||||| || || | ||||||||||||||  |||||||| ||||||||||||| |||| ||||||    
T  17041085 ccacttgggttggtctagtggcattggcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctctcaagtgccaattt 17040996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 298
Target Start/End: Complemental strand, 39499792 - 39499686
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  || |||||||||||||| |||||  ||||||| ||||| || |||||||| |||||||||| ||  ||||||||||| ||| | ||    
T  39499792 ccacttgggttggcctagtggtattggcttgggacctgtgagtgtgttcctctttaaggtctcatgttcgattctttc--gtgtcaatttagatgagtta 39499695  T
Q  290 atttaactt 298  Q
    |||||||||    
T  39499694 atttaactt 39499686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 39631847 - 39631936
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||  || |||||||||||||| ||||| |||||  |||||||||  |||||||| |||||||||||||| ||| ||||||    
T  39631847 ccacttgggttggcctagtggtattggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctctcttgtgccaattt 39631936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 2495870 - 2495798
Alignment:
Q  229 gagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||||| |  ||||| |||||||| |||||| | |||||||||||||| ||||||||||||||    
T  2495870 gagtgtgctcctccttaaaatctcaggttcgattatctctaatatcaatttaaatgggttaatttaacttctt 2495798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 190 - 298
Target Start/End: Original strand, 7801183 - 7801291
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||| |||  |||||||||||| |||| ||||| |||||||||||||| |  |||||||| ||||||  | |||   ||||||||||| |||||||    
T  7801183 ccacttggtttggcctggtggtattgacttgggacctgggagtgtgctcctcttcaaggtctcaggttcgaacccctccgatgtcaatttaagtgggcta 7801282  T
Q  290 atttaactt 298  Q
    |||||||||    
T  7801283 atttaactt 7801291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 22035424 - 22035512
Alignment:
Q  213 ttggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||| |||||  ||||||||||||||| |||| | || |||||||||||||  |||||||||||| ||| |||||||| ||||||    
T  22035424 ttggcttgggacctgagagtgtgctcctcctcgaggacccaggttcgattctctcctgtgtcaatttaagtggactaatttagcttctt 22035512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 33460496 - 33460384
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctcctt-gaggtctcaagttcgattctctctagtgtcaatttaaatgggct 288  Q
    |||| ||||||| | |||||||||||| ||| |||||||||||||| ||||||||  ||||||||  |||||||||| |  |||||||||||  ||||||    
T  33460496 ccacctgggttggtttggtggtattggtttgggacctaggagtgtggtcctccttcaaggtctcagattcgattctccccggtgtcaatttatgtgggct 33460397  T
Q  289 aatttaacttctt 301  Q
    | |||| ||||||    
T  33460396 agtttagcttctt 33460384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 205 - 301
Target Start/End: Complemental strand, 37085607 - 37085511
Alignment:
Q  205 tggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||||| ||  | ||||||||||| |||| ||||| ||| ||||||||||| | | |  |||||||| |||||||||||||||||||    
T  37085607 tggtggtattggcttgggatttgggagtgtgctcatcctcgaggtttcaggttcgattctccccaataccaatttaagtgggctaatttaacttctt 37085511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 30217922 - 30217993
Alignment:
Q  230 agtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||||  |||||||||||||||||||||  ||||||||| ||| |||||||||| | ||||||    
T  30217922 agtgtgctcctcctcaaggtctcaagttcgattctcttcagtgtcaatataagtgggctaattaagcttctt 30217993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 301
Target Start/End: Original strand, 21877828 - 21877922
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||| |||| ||||| |||| |||||||||||| |||||||| |||||||||||    ||| ||| || | |||||||||||||||||||    
T  21877828 gtggtattgacttgggacctgggagggtgctcctccttaaggtctcacgttcgattctccacggtgccaaattgagtgggctaatttaacttctt 21877922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 301
Target Start/End: Complemental strand, 43663171 - 43663057
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatggg 286  Q
    |||||||||||||||  ||| |||||||| |||| |||||||||| ||| ||||||| ||| ||||| |||||| ||||||  || |||||||   |||     
T  43663171 aatccacttgggttggcctgatggtattgacttgggacctaggagcgtggtcctcctcgagatctcaggttcgaatctctccggtatcaatttgggtgga 43663072  T
Q  287 ctaatttaacttctt 301  Q
    |||||||| ||||||    
T  43663071 ctaatttagcttctt 43663057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 5668626 - 5668533
Alignment:
Q  208 tggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||| ||| | | |||||||||||||| ||||||||| | |||||||||||  | || ||||||  |||||||||||| ||||||    
T  5668626 tggtattggcttgggacatggaagtgtgctcctcctcgaggtctcaggatcgattctctccggagttaatttatgtgggctaatttagcttctt 5668533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 9608690 - 9608613
Alignment:
Q  202 ttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||| ||||||| |||||| || || ||||||| ||||||||  || ||||| |||||||||||||||||||||||||    
T  9608690 ttctagtggtataggcttgggatctgggagtgtcctcctcctcaagatctcaggttcgattctctctagtgtcaattt 9608613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 9836262 - 9836185
Alignment:
Q  202 ttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||| ||||||| |||||| || || ||||||| ||||||||  || ||||| |||||||||||||||||||||||||    
T  9836262 ttctagtggtataggcttgggatctgggagtgtcctcctcctcaagatctcaggttcgattctctctagtgtcaattt 9836185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 33869518 - 33869429
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||  || || ||||||||||| ||||| | ||||||||||| ||  |||||||  |||||||||||||| ||||||||||    
T  33869518 ccacttgggttggcctagtagtattggcttgagacctggaagtgtgctccttctcaaggtctctggttcgattctctctggtgtcaattt 33869429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 301
Target Start/End: Original strand, 21558146 - 21558242
Alignment:
Q  205 tggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||| |||||| ||||  ||||| || ||||||||||||  |||||||| |||||||||||||| ||| |||||||  |||| ||||||| ||||||    
T  21558146 tggtagtattgacttggaacctaagaatgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttaggtgggttaatttagcttctt 21558242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 279
Target Start/End: Original strand, 33222390 - 33222462
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||||||||| ||||| | ||||| ||| ||||  |||||||| |||||||||||||| ||||||||||    
T  33222390 gtggtattggcttgggacctggaagtgtactcatcctcaaggtctcaggttcgattctctctggtgtcaattt 33222462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 48125247 - 48125195
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctcc 242  Q
    |||||||||||| ||||||||| |||||||| ||||| |||||||||||||||    
T  48125247 ccacttgggttggtctggtggtgttggcttgggaccttggagtgtgctcctcc 48125195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 3280558 - 3280448
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||   |||||||||||||||| ||||   |||||||||||||||  ||||||||| ||||||| || |  ||| ||||||| |||| |||    
T  3280558 ccacttgggttgacatggtggtattggcttgggacccgagagtgtgctcctcctcaaggtctcaa-ttcgattatccccggtgccaatttagatggacta 3280460  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  3280459 atttagcttctt 3280448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 5579307 - 5579244
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctca 253  Q
    ||||||||||||  |||||||| |||||||| ||||| ||||||||||||||||  ||||||||    
T  5579307 ccacttgggttgacctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctca 5579244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 265
Target Start/End: Complemental strand, 18056848 - 18056773
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||||||||||  ||||||||||||| |||| | | | ||||||||||||||||  |||||||| |||||||||||    
T  18056848 ccacttgggttagtctggtggtattgacttgggtcttcggagtgtgctcctcctgaaggtctcaggttcgattctc 18056773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 25132435 - 25132376
Alignment:
Q  206 ggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||||||||| |||  ||||||||||||||||||| ||| |||||||| |||||||||||    
T  25132435 ggtggtattgacttaggacctaggagtgtgctccttcttaaggtctcaggttcgattctc 25132376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 184 - 279
Target Start/End: Original strand, 31835189 - 31835284
Alignment:
Q  184 atcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||| ||||||||||||  |||||||| |||||||| |  || ||||||||||||||||  |||||||| |||||||| || || ||| ||||||    
T  31835189 atcaacccacttgggttggcctggtggtgttggcttgggtgcttggagtgtgctcctcctcaaggtctcaggttcgattatccctggtgccaattt 31835284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 33181279 - 33181172
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    ||||||||  || ||||||| |||||| ||| | ||||||||||||  ||  || ||||| ||||||||| |||||||||||||||   |||||||||||    
T  33181279 ttgggttgccctagtggtataggcttgggacttgggagtgtgctccaactcaagatctcaggttcgattccctctagtgtcaatttgggtgggctaattt 33181180  T
Q  294 aacttctt 301  Q
    | ||||||    
T  33181179 agcttctt 33181172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 44628256 - 44628146
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  |||||| | || ||||| ||||| ||||||||||||||||  | |||||||||| ||||| |||  ||||||||||   |||||||    
T  44628256 ccacttgggttggcctggtgttgttagcttgggaccttggagtgtgctcctcctcaaagtctcaagtttgattccctc-ggtgtcaattttggtgggcta 44628158  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  44628157 atttagcttctt 44628146  T

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Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 246 - 301
Target Start/End: Complemental strand, 48983750 - 48983695
Alignment:
Q  246 aggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||| ||||||||| |||||||||||||||   |||||||||||||||||||    
T  48983750 aggtctcaggttcgattccctctagtgtcaatttgggtgggctaatttaacttctt 48983695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 28236652 - 28236586
Alignment:
Q  192 acttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttc 258  Q
    |||||||||| | || ||||||||||||| ||||| |||||| ||||||||| |||||||| |||||    
T  28236652 acttgggttgatttgatggtattggcttgggacctgggagtgcgctcctcctcgaggtctctagttc 28236586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 271
Target Start/End: Original strand, 18363699 - 18363780
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagt 271  Q
    ||||||||||||  || ||||||| |||||| ||  | ||||||||||||||||  |||||||| ||| |||||||||||||    
T  18363699 ccacttgggttggcctagtggtataggcttgagatttgggagtgtgctcctcctcaaggtctcaggtttgattctctctagt 18363780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 25021408 - 25021355
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctcct 243  Q
    ||||||||||||  || |||||||||||||| ||||| ||||||||||||||||    
T  25021408 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcct 25021355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 299
Target Start/End: Complemental strand, 38374672 - 38374563
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||   ||||||| |||||||| |||||  |||||||||||||||  |||||| | ||||||||||| |  ||| |||||||  |||||||    
T  38374672 ccacttgggttggcgtggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttaggttcgattctccccggtgccaatttaggtgggcta 38374573  T
Q  290 atttaacttc 299  Q
     |||| ||||    
T  38374572 gtttagcttc 38374563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 41487365 - 41487473
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  ||||||||||||||||| ||| | ||||||| ||||||    |||||||| ||||||||||  |  ||| |||||||  |||||||    
T  41487365 ccacttgggttggcctggtggtattggcttgggacttgggagtgttctcctc---aaggtctcaggttcgattcttcccggtgccaatttaggtgggcta 41487461  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  41487462 atttagcttctt 41487473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 294
Target Start/End: Complemental strand, 5830672 - 5830572
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    |||||||| ||  ||| |||||| |||  |||| ||||||| ||||||||  || | |||||||||||| |||||||||||||||||  ||| |||||||    
T  5830672 ttgggttggtccagtgatattggtttggaacctgggagtgtactcctcctcaagatttcaagttcgattatctctagtgtcaatttaggtggactaattt 5830573  T
Q  294 a 294  Q
    |    
T  5830572 a 5830572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 19553460 - 19553531
Alignment:
Q  193 cttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||||||||  ||||||||||||||||| ||||| ||||||||||||||||  |||||| | |||| ||||||    
T  19553460 cttgggttggcctggtggtattggcttg-gacctgggagtgtgctcctcctcaaggtcttaggttcaattctc 19553531  T

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Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 20952225 - 20952169
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctcct 243  Q
    |||||||||||||||  ||| ||||||||| ||| ||||| ||||||||||||||||    
T  20952225 aatccacttgggttgacctgatggtattggtttgggacctgggagtgtgctcctcct 20952169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 23595733 - 23595785
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctcct 243  Q
    ||||||||||| ||||||||||||| |||| || || ||||||||||||||||    
T  23595733 cacttgggttggtctggtggtattgacttgagatctcggagtgtgctcctcct 23595785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 23945906 - 23945954
Alignment:
Q  232 tgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattta 280  Q
    |||||||||| ||||||||||| ||||||| ||||||| ||||||||||    
T  23945906 tgtgctcctcattgaggtctcaggttcgatcctctctaatgtcaattta 23945954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 190 - 266
Target Start/End: Original strand, 30442491 - 30442567
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctct 266  Q
    ||||||||||||  |  |||||||||||||| ||||| ||||| ||||||||||  |||||| | ||||||||||||    
T  30442491 ccacttgggttggcccagtggtattggcttgggacctgggagtttgctcctcctcaaggtctgaggttcgattctct 30442567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 4566504 - 4566398
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatggg 286  Q
    |||||||||||||||  || ||||||||| |||  ||||| |||||||  |||| ||  |||||||| ||| |||||||||| ||| ||||||| || ||    
T  4566504 aatccacttgggttggcctagtggtattgacttcggaccttggagtgtattccttctcaaggtctcaggtttgattctctctggtgccaatttagat-gg 4566406  T
Q  287 ctaattta 294  Q
    ||||||||    
T  4566405 ctaattta 4566398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 5273663 - 5273552
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  |||||||| |||||||| |||||  |||||||||||||||  |||||| | ||| |||| ||||  ||| ||||||   |||||||    
T  5273663 ccacttgggttggcctggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttaggtttgattgtctccggtgccaatttgggtgggcta 5273564  T
Q  290 atttaacttctt 301  Q
     |||| ||||||    
T  5273563 gtttagcttctt 5273552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 8108599 - 8108658
Alignment:
Q  205 tggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattct 264  Q
    ||||||||||| |||| ||  | |||||| ||||||||||||||||||| ||||||||||    
T  8108599 tggtggtattgacttgggatatgggagtgcgctcctccttgaggtctcaggttcgattct 8108658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 11700185 - 11700271
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    |||| ||||||||| ||| |  |||| ||||||||||  |||||||| |||||||||||||| ||| |||||| | ||||||||||||    
T  11700185 gtggcattggcttgagacttgagagtttgctcctcctcaaggtctcaggttcgattctctct-gtgccaatttgagtgggctaattta 11700271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 11765111 - 11765036
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgatt 262  Q
    ||||||||| ||||| | ||||||||||| |||  ||| | |||||||||||||||||||| |||||  |||||||    
T  11765111 aatccacttaggttgatttggtggtattgactttggacgtgggagtgtgctcctccttgagatctcagattcgatt 11765036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 301
Target Start/End: Complemental strand, 16355833 - 16355758
Alignment:
Q  226 taggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||| |||||| | || || ||||||||| || | | ||||||||| | |||||||||||||||||||    
T  16355833 taggagtgtgctactccttaaagtttcgagttcgattttccccaatgtcaatttgattgggctaatttaacttctt 16355758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 301
Target Start/End: Original strand, 24046588 - 24046639
Alignment:
Q  250 ctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||| |||||||||||  |||||||||||| |||||||||||| ||||||    
T  24046588 ctcaaggtcgattctctccggtgtcaatttaagtgggctaatttagcttctt 24046639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 2882986 - 2883052
Alignment:
Q  223 acctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||| ||||||||||||||||  |||||||| |||| ||||||||| ||| |||||||  |||||||    
T  2882986 accttggagtgtgctcctcctcaaggtctcaggttcaattctctctggtggcaatttaggtgggcta 2883052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 228 - 294
Target Start/End: Complemental strand, 9183226 - 9183160
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    ||||||||||||||||  | |||||| |||||||| ||||| ||||||||||   ||||||||||||    
T  9183226 ggagtgtgctcctcctcaaagtctcaggttcgattatctctggtgtcaatttgggtgggctaattta 9183160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 301
Target Start/End: Complemental strand, 16708515 - 16708417
Alignment:
Q  203 tctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||| ||  ||| | |||||||  ||||||| |||  |||| ||||||||||||| | | |||||||| |||| |||||||| ||||||    
T  16708515 tctggtggtattgggtttggacttgggagtgtattcctcctcgagaactcatgttcgattctctccaatatcaatttagatggactaatttagcttctt 16708417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 17113818 - 17113876
Alignment:
Q  210 gtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctct 268  Q
    ||||||||||   |||| |||||||||| |||||  |||||||||||||||||||||||    
T  17113818 gtattggcttagaacctgggagtgtgcttctcctcaaggtctcaagttcgattctctct 17113876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 301
Target Start/End: Complemental strand, 17682751 - 17682653
Alignment:
Q  203 tctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||| ||  ||| | |||||||  ||||||| |||  |||| ||||||||||||| | | |||||||| |||| |||||||| ||||||    
T  17682751 tctggtggtattgggtttggacttgggagtgtattcctcctcgagaactcatgttcgattctctccaatatcaatttagatggactaatttagcttctt 17682653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 21570066 - 21570016
Alignment:
Q  229 gagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||| |||||||||  ||||||||||||||||| ||||| ||||||||||    
T  21570066 gagtgcgctcctcctcaaggtctcaagttcgattttctctggtgtcaattt 21570016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 259 - 301
Target Start/End: Complemental strand, 34647645 - 34647603
Alignment:
Q  259 gattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||| | |||||||||||||||| |||||||||||||||    
T  34647645 gattctcttttgtgtcaatttaaatggtctaatttaacttctt 34647603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 38917098 - 38917186
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattta 280  Q
    ||||||| |||| ||| ||||||||  |||| ||| ||| | |||||| |||||||| ||||||||||||||||| || ||||||||||||    
T  38917098 ccacttgagttggtctagtggtattaacttgagacttagaa-tgtgcttctccttgaagtctcaagttcgattctttc-agtgtcaattta 38917186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 185 - 279
Target Start/End: Complemental strand, 48039725 - 48039631
Alignment:
Q  185 tcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||| ||||||||||||  |||||||| ||||||||||| || ||||| ||||||| |   |||||||| |||| |||||| || ||| ||||||    
T  48039725 tcaacccacttgggttggcctggtggtgttggcttgcgatcttggagtatgctccttcgcaaggtctcaggttctattctccctggtgccaattt 48039631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 301
Target Start/End: Complemental strand, 279989 - 279916
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||| ||||||||| |||||||| |||| ||||||||  ||| ||||||   |||||||||||| ||||||    
T  279989 ggagtgtactcctccttaaggtctcaggttcaattctctccggtgccaatttgggtgggctaatttagcttctt 279916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 301
Target Start/End: Original strand, 3174968 - 3175041
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||  || ||||||||| ||||||||||||| | | ||||||||  |||| ||||||| ||||||    
T  3174968 ggagtgtgctccatctcgaggtctcaggttcgattctctccaatatcaatttagttgggttaatttagcttctt 3175041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 264
Target Start/End: Original strand, 25241996 - 25242073
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattct 264  Q
    ||||||||||||||| |||||||||| |  |||| || ||  |||| |||||||||| |||||||||  |||||||||    
T  25241996 aatccacttgggttgatctggtggtaatatcttgagatctgagagtatgctcctcctcgaggtctcagattcgattct 25242073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 29385816 - 29385727
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||  | | |||| |||||||| ||| | ||||||||||||||||  |||||||| ||| |||||||| | ||| ||||||    
T  29385816 ccacttgggttggccggatggtgttggcttgggactttggagtgtgctcctcctcaaggtctcaggtttgattctctttggtgccaattt 29385727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 42836074 - 42836021
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctcct 243  Q
    ||||||||||||  || |||||||||||||| ||||| ||||||||||| ||||    
T  42836074 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcttcct 42836021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 45709777 - 45709704
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctc 267  Q
    ||||||||  || |||||||| ||||| || ||  ||||||||||||||| ||||||||| |||||||| ||||    
T  45709777 ttgggttggcctagtggtattagcttgggatctgagagtgtgctcctcctcgaggtctcaggttcgattatctc 45709704  T

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Target: chr6 (Bit Score: 60; Significance: 3e-25; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 33549107 - 33549218
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||||||| |||||||||||||||||| ||||| |||||||||||||||| ||||||||| |||||||||||||   || |||||||  || ||||    
T  33549107 ccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtgagcta 33549206  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  33549207 atttagcttctt 33549218  T

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Target: chr6; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 12234580 - 12234469
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||| |||||  |||||||||||| |||| ||||| ||||||||||||  || ||||||||| ||||||||||||| |||||||||||| ||||| ||    
T  12234580 ccacttaggttggcctggtggtattgacttgggacctgggagtgtgctccctctcgaggtctcaggttcgattctctccagtgtcaatttagatgggata 12234481  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  12234480 atttagcttctt 12234469  T

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Target: chr6; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 12188376 - 12188287
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||  || |||||||||||||| ||||| ||||||||||||||||  |||| |||||||||||||||||||||| ||||||    
T  12188376 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctctagtgccaattt 12188287  T

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Target: chr6; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 194 - 301
Target Start/End: Original strand, 21418477 - 21418584
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    ||||||||  ||||||||||||||||| ||| | ||||||||||||||||  | |||||||||||||||||| |||||| ||||| |  |||||||||||    
T  21418477 ttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctccatgtctcaagttcgattctccctagtgccaattaaggtgggctaattt 21418576  T
Q  294 aacttctt 301  Q
    | ||||||    
T  21418577 agcttctt 21418584  T

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Target: chr6; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 28841434 - 28841521
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    ||||| |||||||| |||| |||||||||||||||||  ||||||||||||||||||||||  ||||||||||| || ||||||||||    
T  28841434 gtggttttggcttgagaccaaggagtgtgctcctcctcaaggtctcaagttcgattctctccggtgtcaatttagattggctaattta 28841521  T

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Target: chr6; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 31623064 - 31622953
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||||||| || ||||||||||||||| ||||| |||||||||||||||| ||||||||| ||| || || |||  ||||||||||   |||||||    
T  31623064 ccacttgggttggtccggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggtttgaatcactccggtgtcaatttgggtgggcta 31622965  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  31622964 atttagcttctt 31622953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 187 - 301
Target Start/End: Original strand, 13441050 - 13441171
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtg-------ctcctccttgaggtctcaagttcgattc-tctctagtgtcaatt 278  Q
    ||||||||||||||| || ||||||||||||||| ||||| ||||||||       |||||||  ||||||||||||||||||| |||| |||| |||||    
T  13441050 aatccacttgggttggtcgggtggtattggcttgggacctgggagtgtgctctgtgctcctccacgaggtctcaagttcgattcttctc-agtgccaatt 13441148  T
Q  279 taaatgggctaatttaacttctt 301  Q
    ||| |||||||||||||||||||    
T  13441149 taagtgggctaatttaacttctt 13441171  T

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Target: chr6; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 6758495 - 6758384
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||| ||||  ||||||||||||||||  ||  | |||||||||||| ||| ||||||||||| |||||||||||| |||||||||||  ||||| |    
T  6758495 ccacttgtgttggcctggtggtattggcttaggatttgggagtgtgctccacctcgaggtctcaagatcgattctctctggtgtcaatttaggtgggcaa 6758396  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  6758395 atttagcttctt 6758384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 191 - 294
Target Start/End: Complemental strand, 10338246 - 10338143
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaa 290  Q
    |||||||||||   |||||||||||||||| ||||||||||||||||||||||  |||||||| ||||||||| | | |||||||| || | || |||||    
T  10338246 cacttgggttggcatggtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcgattccccccagtgtcaacttgattgagctaa 10338147  T
Q  291 ttta 294  Q
    ||||    
T  10338146 ttta 10338143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 191 - 279
Target Start/End: Complemental strand, 6776679 - 6776591
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||||||  ||||||||||||||||| || || || ||||||||||||| || |||||||||| |||||||||| || |||||||    
T  6776679 cacttgggttggcctggtggtattggcttgggatctgggggtgtgctcctcctcgatgtctcaagtttgattctctctggtttcaattt 6776591  T

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Target: chr6; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 12633012 - 12633123
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||| | |||| ||||| |||| ||  | |||||||||||||| | ||| ||||| ||||||||||||| | ||||||||||| ||| |||    
T  12633012 ccacttgggttgtcccggtgatattgacttgggatttgggagtgtgctcctcttcgagatctcatgttcgattctctccaatgtcaatttaagtggacta 12633111  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  12633112 atttagcttctt 12633123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 32613213 - 32613102
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  |||||||||||| |||| |  || ||||||||||||| ||  || ||||| ||||||||||||  ||||||||||||||||| |||    
T  32613213 ccacttgggttggcctggtggtattgacttggggtctgggagtgtgctccttctcaagatctcatgttcgattctcttcagtgtcaatttaaatggacta 32613114  T
Q  290 atttaacttctt 301  Q
     |||| ||||||    
T  32613113 gtttagcttctt 32613102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 207 - 301
Target Start/End: Original strand, 346551 - 346644
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||| |||| ||||| |||||||||| ||||| ||||||||| ||||||||||| |  |||||||||||| | |||||||||| ||||||    
T  346551 gtggtattgacttgggacct-ggagtgtgcttctcctcgaggtctcatgttcgattctcacccgtgtcaatttaagtaggctaatttatcttctt 346644  T

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Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 207 - 301
Target Start/End: Original strand, 3715472 - 3715566
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||| |||| || || ||||| |||| ||| | ||||||||||||||||||||||| ||||||||||||  |||||| ||||| ||||||    
T  3715472 gtggtattgacttgagatctgggagtatgcttctcgtcgaggtctcaagttcgattctctccagtgtcaatttaggtgggctgatttagcttctt 3715566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 207 - 301
Target Start/End: Original strand, 20213061 - 20213155
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||  ||||| ||||| ||||||||||||||||  | |||||| ||||||||| |||||||||||||||   |||||||||||| ||||||    
T  20213061 gtggtatacgcttgggacctgggagtgtgctcctcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttctt 20213155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 207 - 301
Target Start/End: Original strand, 22107084 - 22107178
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||  ||||| ||||| ||||||||||||||||  | |||||| ||||||||| |||||||||||||||   |||||||||||| ||||||    
T  22107084 gtggtatacgcttgggacctgggagtgtgctcctcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttctt 22107178  T

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Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 190 - 264
Target Start/End: Original strand, 30127403 - 30127477
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattct 264  Q
    |||||||||||| |||||||||||||||||| |  || |||||||||||||| | ||||||||| ||||||||||    
T  30127403 ccacttgggttggtctggtggtattggcttggggtctgggagtgtgctcctcttcgaggtctcaggttcgattct 30127477  T

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Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 279
Target Start/End: Original strand, 4105048 - 4105143
Alignment:
Q  187 aatccacttgggttgttctggtggtatt---ggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||||| |||| ||| ||||||||   ||||||  |||||||||||||||||||||| || ||||| |||||||| ||||| ||||||||||    
T  4105048 aatccacttgagttggtctagtggtattattggcttgaaacctaggagtgtgctcctccttaagatctcaggttcgattttctctggtgtcaattt 4105143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 206 - 301
Target Start/End: Original strand, 6385881 - 6385976
Alignment:
Q  206 ggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||| |||| ||||| ||| ||||||||||||| |||||||| |||||||||||||  |||  |||||   |||||||||||| ||||||    
T  6385881 ggtggtattgacttgggacctgggactgtgctcctccttaaggtctcaggttcgattctctccggtgctaatttgggtgggctaatttagcttctt 6385976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 11103468 - 11103397
Alignment:
Q  230 agtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||||| |||||||   ||||||||||||| ||| |||||||| || ||||||||||||||||    
T  11103468 agtgtgctcctccttaaggtctccgattcgattctctctggtgccaatttaagtgagctaatttaacttctt 11103397  T

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Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 196 - 291
Target Start/End: Original strand, 12216753 - 12216848
Alignment:
Q  196 gggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaat 291  Q
    |||||| |||||||||||||| ||| |||||  || ||||||||| || ||||||||| ||||||||||||  | ||||||||||  |||||||||    
T  12216753 gggttggtctggtggtattggtttgggacctgcgaatgtgctccttctcgaggtctcaggttcgattctcttgactgtcaatttaggtgggctaat 12216848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 13227231 - 13227120
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  |  ||||||||||  || || || |||||||||||||||| || ||||||||||||||||||||   ||||| ||||  ||||| |    
T  13227231 ccacttgggttggccatgtggtattggtatgagatctgggagtgtgctcctcctcgaagtctcaagttcgattctctcatatgtcagtttaggtgggcca 13227132  T
Q  290 atttaacttctt 301  Q
    ||||||||||||    
T  13227131 atttaacttctt 13227120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 265
Target Start/End: Original strand, 14557965 - 14558040
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||||||||||| ||||||||| |||||||| ||||| | ||||||||||||||   ||||||| |||||||||||    
T  14557965 ccacttgggttggtctggtggtgttggcttgggacctggaagtgtgctcctcctccgggtctcaggttcgattctc 14558040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 301
Target Start/End: Original strand, 28363957 - 28364051
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||| ||| || ||  |||||||||||||||  ||||||||  ||||||| ||||| ||||||||||  |||||||||||||| |||||    
T  28363957 gtggtattggtttgggatctgcgagtgtgctcctcctcaaggtctcagattcgattatctctggtgtcaatttggatgggctaatttaatttctt 28364051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 193 - 294
Target Start/End: Original strand, 11423572 - 11423673
Alignment:
Q  193 cttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatt 292  Q
    |||||| || ||||||||||||| |||| ||  | ||||| |||| ||||| ||||||||| |||||||| |||| |||||||||||  |||| ||||||    
T  11423572 cttgggctggtctggtggtattgacttgggatttgggagtatgcttctcctcgaggtctcaggttcgattttctccagtgtcaatttgtatggactaatt 11423671  T
Q  293 ta 294  Q
    ||    
T  11423672 ta 11423673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 301
Target Start/End: Complemental strand, 24641248 - 24641152
Alignment:
Q  205 tggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||| |||| || || |||||||||||||||| ||||| | | |||||||||||   | || |||||||  |||||||||||||||||||    
T  24641248 tggtggtattgacttgggatctgggagtgtgctcctcctcgaggtttaaggttcgattctcctcactgccaatttaggtgggctaatttaacttctt 24641152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 301
Target Start/End: Complemental strand, 32201943 - 32201847
Alignment:
Q  205 tggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||||| || ||  |||||||||||||||| | || |||||||||||| |||| | | ||||||||  |||| || |||||||||||    
T  32201943 tggtggtattggcttgggatctcagagtgtgctcctcctttaagtttcaagttcgattatctccattatcaatttaggtgggttagtttaacttctt 32201847  T

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Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 2616519 - 2616590
Alignment:
Q  230 agtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||| |  |||||||||||||| ||||||| | |||||||||| |||| ||||||||| |||||    
T  2616519 agtgtgctcctcttcaaggtctcaagttcgtttctctccaatgtcaatttagatggactaatttaatttctt 2616590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 14200016 - 14199909
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    |||||||| ||| | ||||| |||||| ||| | ||||||||||||||||  ||||||||  ||||||||  ||||||||||||||   ||| |||||||    
T  14200016 ttgggttgctctagaggtataggcttgagacttgggagtgtgctcctcctcaaggtctcagattcgattccttctagtgtcaatttgggtggactaattt 14199917  T
Q  294 aacttctt 301  Q
    | ||||||    
T  14199916 agcttctt 14199909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 265
Target Start/End: Original strand, 33560382 - 33560457
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||||| |||||| || ||||| |||||||| ||||| |||||||| |||||||| | |||||| |||||||||||    
T  33560382 ccactttggttgtcctagtggtgttggcttgagaccttggagtgtgatcctccttaaagtctcatgttcgattctc 33560457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 301
Target Start/End: Original strand, 8268638 - 8268752
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatggg 286  Q
    |||||| |||||||| |||| |||| ||| |||| ||  | ||||||||||||||||  | ||| || |||||||||| |||||||| |||||  ||| |    
T  8268638 aatccatttgggttggtctgatggtgttgccttgagatttgggagtgtgctcctcctcaaagtcacatgttcgattctatctagtgtgaatttggatgag 8268737  T
Q  287 ctaatttaacttctt 301  Q
     ||||||||||||||    
T  8268738 ttaatttaacttctt 8268752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 221 - 299
Target Start/End: Original strand, 17736740 - 17736818
Alignment:
Q  221 cgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttc 299  Q
    ||||||||||||||| | |||| |||||| ||| |||||||| | ||  || ||||||||| |||||||||||||||||    
T  17736740 cgacctaggagtgtgtttctccctgaggtttcaggttcgattatttccggtatcaatttaagtgggctaatttaacttc 17736818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 301
Target Start/End: Original strand, 2484761 - 2484834
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||| ||||| ||| | |||| | |||||||||||||  |||||||||| | |||||||||||||||||||    
T  2484761 ggagtgtactccttcttaaagtctgaggttcgattctctccggtgtcaatttgagtgggctaatttaacttctt 2484834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 34786507 - 34786450
Alignment:
Q  210 gtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctc 267  Q
    ||||||||||| || || ||||||||||||| || || ||||||||||||||||||||    
T  34786507 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 34786450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 301
Target Start/End: Original strand, 3779337 - 3779453
Alignment:
Q  185 tcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatg 284  Q
    |||| |||||| |||||  || |||||||||||||| ||| | ||||||||||||| ||  ||||||||  ||| |||| ||||  |||||||||  ||     
T  3779337 tcaacccacttaggttgacctagtggtattggcttgagacttgggagtgtgctccttctcaaggtctcagattcaattccctctgatgtcaattttgata 3779436  T
Q  285 ggctaatttaacttctt 301  Q
    || ||||||||||||||    
T  3779437 ggataatttaacttctt 3779453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 34444809 - 34444881
Alignment:
Q  193 cttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||||||||  |||||||||||| |||| |||||  ||||||||||||||   |||||||| |||||||||||    
T  34444809 cttgggttggcctggtggtattgacttgggaccttagagtgtgctcctccccaaggtctcaggttcgattctc 34444881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 1056758 - 1056647
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  || ||||||||||| || ||| | ||||| ||||| ||||  |||| | |||||||||||||||| ||| ||| |||  |||| ||    
T  1056758 ccacttgggttgacctagtggtattggcctgggacttgggagtatgctcatcctcaaggttttaagttcgattctctctggtgccaagttaggtgggtta 1056659  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  1056658 atttagcttctt 1056647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 276
Target Start/End: Original strand, 9626070 - 9626121
Alignment:
Q  225 ctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaa 276  Q
    |||||||| |||||||||| ||||||||| |||||||||||||  |||||||    
T  9626070 ctaggagtatgctcctcctcgaggtctcatgttcgattctctccggtgtcaa 9626121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 255 - 301
Target Start/End: Complemental strand, 1992255 - 1992209
Alignment:
Q  255 gttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||||||||||||||||  || ||||||||| ||||||    
T  1992255 gttcgattctctctagtgtcaatttaggtgtgctaatttagcttctt 1992209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 18263892 - 18263954
Alignment:
Q  239 ctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||| || ||||||||||| | |||| |||||||  |||||||||||| ||||||    
T  18263892 ctccttgaggtcccaggttcgattctccccagtgccaatttaggtgggctaatttagcttctt 18263954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 205 - 279
Target Start/End: Original strand, 20863393 - 20863467
Alignment:
Q  205 tggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||| |||||||| ||| | ||||||||||||||||  ||||||||  || ||||||||||| || ||||||    
T  20863393 tggtggtgttggcttgggactttggagtgtgctcctcctcaaggtctcagatttgattctctctaatgccaattt 20863467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 280
Target Start/End: Complemental strand, 24256839 - 24256805
Alignment:
Q  246 aggtctcaagttcgattctctctagtgtcaattta 280  Q
    ||||||||||||||||||||||| |||||||||||    
T  24256839 aggtctcaagttcgattctctctggtgtcaattta 24256805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 8597774 - 8597709
Alignment:
Q  236 ctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||  ||||||||||||| |||||||| |||| ||||||   |||||||||||| ||||||    
T  8597774 ctcctcctcaaggtctcaagttcaattctctccagtgccaatttgggtgggctaatttagcttctt 8597709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 9875245 - 9875310
Alignment:
Q  229 gagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    ||||||||| |||||||||||||||  ||||  |||||||  ||||||||||| | ||||||||||    
T  9875245 gagtgtgcttctccttgaggtctcagattcggctctctctgatgtcaatttaagtaggctaattta 9875310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 220
Target Start/End: Original strand, 11854726 - 11854755
Alignment:
Q  191 cacttgggttgttctggtggtattggcttg 220  Q
    ||||||||||||||||||||||||||||||    
T  11854726 cacttgggttgttctggtggtattggcttg 11854755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 266
Target Start/End: Complemental strand, 13114015 - 13113958
Alignment:
Q  209 ggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctct 266  Q
    |||||||||||| ||||| | |||||||||||||| ||| ||| ||||| ||||||||    
T  13114015 ggtattggcttgggaccttgaagtgtgctcctcctcgagatctgaagtttgattctct 13113958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 268
Target Start/End: Complemental strand, 15951382 - 15951297
Alignment:
Q  183 aatcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctct 268  Q
    |||||| ||| ||||||||| || |||||||  ||||| ||  | ||||||||||||||||  |||||||| |||| |||||||||    
T  15951382 aatcaacccagttgggttgtccttgtggtataagcttgagatttgggagtgtgctcctcctcaaggtctcatgttcaattctctct 15951297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 16405109 - 16405178
Alignment:
Q  211 tattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattta 280  Q
    |||||| ||| ||||| |||||||||| ||||| |||||||||  |||||||||| |  |||||||||||    
T  16405109 tattggtttgggacctgggagtgtgcttctcctcgaggtctcagtttcgattctcacctgtgtcaattta 16405178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 301
Target Start/End: Complemental strand, 18562673 - 18562600
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||||||||| | ||| ||| ||||||| | |||  |||||||  |||||||||||| ||||||    
T  18562673 ggagtgtgctcctccttgagatttcaggtttgattctcccaagtaccaatttaggtgggctaatttagcttctt 18562600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 245 - 290
Target Start/End: Complemental strand, 21148657 - 21148612
Alignment:
Q  245 gaggtctcaagttcgattctctctagtgtcaatttaaatgggctaa 290  Q
    ||||||||||||||||||| |||||||| ||||||  |||||||||    
T  21148657 gaggtctcaagttcgattccctctagtgccaatttcgatgggctaa 21148612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 268
Target Start/End: Original strand, 24617083 - 24617159
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctct 268  Q
    ||||||||||| ||| |||||||||| ||| || |||| ||| ||||||||| | |||||| | ||||||||||||||    
T  24617083 cacttgggttgatctcgtggtattggtttgagatctagaagtatgctcctcc-tcaggtctaaggttcgattctctct 24617159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 3e-25; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 16773810 - 16773921
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||| |||| ||||||||||||| |||| ||||| |||||||||||||||| ||||||||| ||||||||||||||  || |||||||  |||||||    
T  16773810 ccacttgagttggtctggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctgatgccaatttaggtgggcta 16773909  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  16773910 atttagcttctt 16773921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 29075784 - 29075895
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||||||   || |||||||||||||| || || |||||||||||||||| ||| ||||| |||||||||||||| ||| ||||||| ||||||||    
T  29075784 ccacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctctctggtgccaatttagatgggcta 29075883  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  29075884 atttagcttctt 29075895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 21549210 - 21549121
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||  || |||||||||||||| ||||| ||||||||||||||||| | ||||||||||||||| ||||||||| ||||||    
T  21549210 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctccttaaagtctcaagttcgattttctctagtgccaattt 21549121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 30883271 - 30883182
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||||||| ||| |||||||||||||| ||||| ||||||||||||||||  ||||||||||||| |||||| | |||||||||||    
T  30883271 ccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttcaattctcaccagtgtcaattt 30883182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 190 - 263
Target Start/End: Complemental strand, 30109381 - 30109308
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattc 263  Q
    ||||||||||||   |||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  30109381 ccacttgggttggcttggtggtattggcttgtgacctgggagtgtgctcctccttgaggtctcaggttcgattc 30109308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 8278348 - 8278237
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||||||| |||| ||||||||||||| ||| | |||||||||||||||| ||| ||||||||| |||| ||||  ||| | |||||  |||||||    
T  8278348 ccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgagatctcaagtttgattatctccggtgccgatttaggtgggcta 8278249  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  8278248 atttagcttctt 8278237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 17028337 - 17028226
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  || || ||||||| ||| ||| | ||||||||||||||||  |||||||| ||| ||||| ||||||||||||||||  |||||||    
T  17028337 ccacttgggttgacctagttgtattgggttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaatttaggtgggcta 17028238  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  17028237 atttagcttctt 17028226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 21589291 - 21589402
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  ||||||||||||||||| ||||| ||||| |||| ||||| || |||||| ||||||||| |||| ||| |||||||  |||||||    
T  21589291 ccacttgggttggcctggtggtattggcttgggacctgggagtctgctactcctcgatgtctcaggttcgattccctctggtgccaatttaggtgggcta 21589390  T
Q  290 atttaacttctt 301  Q
     |||| ||||||    
T  21589391 gtttagcttctt 21589402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 25627060 - 25627149
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||  || ||||||||||||||  || | ||||||||||||||||  |||||||| |||||||||||||| ||||||||||    
T  25627060 ccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaattt 25627149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 34984809 - 34984898
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||||||| ||| ||||||||||||||  |||| ||||||||||||||||  |||||| | |||||||||||||| ||| ||||||    
T  34984809 ccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgccaattt 34984898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 14495874 - 14495767
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    |||||||| ||||||||||||| |||| || || |||||||||||||||| |||||||||  || |||||||||   || ||||||| |||||||| |||    
T  14495874 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcagatttgattctctccgatgccaatttagatgggctagttt 14495775  T
Q  294 aacttctt 301  Q
    | ||||||    
T  14495774 agcttctt 14495767  T

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Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 22020918 - 22020831
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    |||||||| ||||| || || ||||||||||||||||||| ||||||  |||||||||||| ||||| ||||||  ||||||||||||    
T  22020918 gtggtattagcttgggatctgggagtgtgctcctccttgaagtctcagattcgattctctccagtgttaatttaggtgggctaattta 22020831  T

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Target: chr5; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 226 - 301
Target Start/End: Original strand, 29173529 - 29173604
Alignment:
Q  226 taggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||||||| ||||| ||| |||||||| ||||| |||||||||||  |||||||||||| ||||||    
T  29173529 taggagtgtgctcctcctcgaggtttcaggttcgattatctctggtgtcaatttaggtgggctaatttagcttctt 29173604  T

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Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 43442216 - 43442303
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    |||||||||| ||| || || ||||||||||||||||  |||||||| ||||||||||||||  |||||||||  |||||||||||||    
T  43442216 gtggtattggtttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctgttgtcaatttggatgggctaattta 43442303  T

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Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 1410728 - 1410645
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatt 278  Q
    |||||||| ||||||||||||| |||| ||  | |||||||||||||||| |||||||| ||||||||||||| | |||||||||    
T  1410728 ttgggttggtctggtggtattgacttgggatatgggagtgtgctcctcctcgaggtctc-agttcgattctctgtggtgtcaatt 1410645  T

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Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 207 - 279
Target Start/End: Complemental strand, 37258422 - 37258350
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||| ||||| || |||||||||||||||||||  |||| ||| |||||||||||||| ||||||||||    
T  37258422 gtggtattagcttgggatctaggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgtcaattt 37258350  T

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Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 265
Target Start/End: Original strand, 16457813 - 16457888
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||||| |||||  ||||||||||||||||| ||||| ||||||||||||||||  |||||||| |||| ||||||    
T  16457813 ccacttaggttggcctggtggtattggcttgggaccttggagtgtgctcctcctcaaggtctcatgttcaattctc 16457888  T

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Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 226 - 301
Target Start/End: Original strand, 29210397 - 29210472
Alignment:
Q  226 taggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||||||| ||||| |||||||| ||||||||| || ||||||||  ||| |||||||| ||||||    
T  29210397 taggagtgtgctcctcctcgaggtttcaagttcaattctctctggtatcaatttaggtggactaatttagcttctt 29210472  T

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Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 301
Target Start/End: Original strand, 16436622 - 16436730
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaa 290  Q
    |||||||||||  || |||||||||||||| ||| | ||||||||||||||||  |||||||| |||||||| || | ||| ||||||| | || |||||    
T  16436622 cacttgggttggcctagtggtattggcttgggactt-ggagtgtgctcctcctcaaggtctcatgttcgattttcac-agtatcaatttgagtgagctaa 16436719  T
Q  291 tttaacttctt 301  Q
    |||||||||||    
T  16436720 tttaacttctt 16436730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 14285164 - 14285253
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||  |  |||| |||||||||  |||| ||||||||||||||||  |||||||| |||||||||||||| ||| ||||||    
T  14285164 ccacttgggttggccgagtggaattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 14285253  T

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Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 18596074 - 18595985
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||| ||| ||| |||||||||||||| ||||| ||| ||||||||||||  |||||| | |||||||| ||||| ||| ||||||    
T  18596074 ccacttggattgatctagtggtattggcttgtgacctgggaatgtgctcctcctcaaggtcttaggttcgattttctctggtgccaattt 18595985  T

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Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 187 - 298
Target Start/End: Original strand, 18437085 - 18437196
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatggg 286  Q
    ||||||||| |||||  || ||||||||  |||| ||| |  |||||||||||||||  | || ||  |||||||||||||||||| ||||||| ||||     
T  18437085 aatccacttaggttggcctagtggtattaacttgggacttgagagtgtgctcctcctcaaagtttcgggttcgattctctctagtgccaatttagatgga 18437184  T
Q  287 ctaatttaactt 298  Q
    ||||||||||||    
T  18437185 ctaatttaactt 18437196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 22737085 - 22737196
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||||||| ||| |||||||||||||| ||| | | |||||||||||||   | |||||| ||||||||| ||||  | ||||||||  |||| ||    
T  22737085 ccacttgggttggtctagtggtattggcttgggacttggaagtgtgctcctccccaatgtctcaggttcgattccctctgatatcaatttaggtgggtta 22737184  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  22737185 atttagcttctt 22737196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 27841052 - 27840981
Alignment:
Q  230 agtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||| ||| ||||  |||||||||||||| |||| |||||  ||||||||||||| ||||||    
T  27841052 agtgtgctcctcctcgagatctccggttcgattctctctggtgttaatttggatgggctaatttagcttctt 27840981  T

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Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 43241754 - 43241679
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctct 266  Q
    ||||||||||| ||| ||||||||| |||| || || ||||||||| | |||||||||||||| |||| |||||||    
T  43241754 cacttgggttggtctagtggtattgacttgggatcttggagtgtgcccttccttgaggtctcaggttcaattctct 43241679  T

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Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 230 - 300
Target Start/End: Original strand, 1279034 - 1279104
Alignment:
Q  230 agtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttct 300  Q
    |||||||||||| | ||||||||||||| |||||||||| ||||||||||   ||| |||||||| |||||    
T  1279034 agtgtgctcctcatcgaggtctcaagttagattctctctggtgtcaatttgggtggactaatttagcttct 1279104  T

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Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 301
Target Start/End: Original strand, 21086714 - 21086828
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatggg 286  Q
    |||||||||| |||| |||| ||||||||  ||  || || | ||||||||||||||  || |||||  ||||||| ||||| ||||||||||| |||      
T  21086714 aatccacttgagttggtctgatggtattgatttaggatctggcagtgtgctcctcctcaagatctcagattcgattatctctggtgtcaatttagatgac 21086813  T
Q  287 ctaatttaacttctt 301  Q
    |||||||||||||||    
T  21086814 ctaatttaacttctt 21086828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 299
Target Start/End: Complemental strand, 87496 - 87388
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||| |||||  || ||||||||| ||||  | || ||||||||||||||||  |||||||| ||| ||||| ||| ||||||||||| | |||||||    
T  87496 ccacttcggttggcctagtggtattgccttggaatctgggagtgtgctcctcctcaaggtctcaggtttgattc-ctccagtgtcaatttgagtgggcta 87398  T
Q  290 atttaacttc 299  Q
    ||||| ||||    
T  87397 atttagcttc 87388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 7918542 - 7918453
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||  || ||||||||||||||  |||| ||||||  ||||||||  |||||| | |||||||||||||| ||| ||||||    
T  7918542 ccacttgggttggcctagtggtattggcttggaacctgggagtgcactcctcctcaaggtcttaggttcgattctctctggtgccaattt 7918453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 26078124 - 26078035
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||  || |||||||||| ||| ||| | ||||| |||| ||| |  |||||||| |||||||||||||||||| ||||||    
T  26078124 ccacttgggttggcctagtggtattggtttgggacttgggagtatgcttctcttcaaggtctcaggttcgattctctctagtgccaattt 26078035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 301
Target Start/End: Original strand, 30000157 - 30000230
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||| ||| |||||| ||||||||| |||||| |||||||  || |||||||| |||| ||||||||||||||    
T  30000157 ggagtatgcacctcctcgaggtctcaggttcgactctctctgatgccaatttaagtgggttaatttaacttctt 30000230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 12883844 - 12883920
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctc 267  Q
    ||||||| |||  ||| ||||||| | ||| || || |||||||||||||||||||||||||| |||| ||||||||    
T  12883844 cacttggattgacctgatggtattaggttgggatctgggagtgtgctcctccttgaggtctcatgttcaattctctc 12883920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 301
Target Start/End: Original strand, 17155831 - 17155936
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    |||||||| | | |||||||||| ||| |||||  ||| |||||||||||  |||||||| ||| |||||||| |  || |||||| | |||||||||||    
T  17155831 ttgggttggtttagtggtattggtttgggacct--gagagtgctcctcctcaaggtctcaggtttgattctctgtgctgccaatttgagtgggctaattt 17155928  T
Q  294 aacttctt 301  Q
    ||||||||    
T  17155929 aacttctt 17155936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 43230808 - 43230736
Alignment:
Q  229 gagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||||| || |||||  ||| ||||||||| ||||||||||| ||| | || |||||||||||    
T  43230808 gagtgtgctcctccttaagatctcagattcaattctctcttgtgtcaatttagatgagttagtttaacttctt 43230736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 84851 - 84902
Alignment:
Q  214 tggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    ||||||| || || ||||||||||||||||  ||||||||||||||||||||    
T  84851 tggcttgggatctgggagtgtgctcctcctcaaggtctcaagttcgattctc 84902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 294
Target Start/End: Original strand, 5596181 - 5596284
Alignment:
Q  192 acttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctag-tgtcaatttaaatgggctaa 290  Q
    |||||||||| | |||||||||||  ||| || ||  ||||| ||||||||| ||||| |||  |||| |||||||||| ||||||||||| ||| ||||    
T  5596181 acttgggttgatatggtggtattgttttgggatctgagagtgcgctcctcctcgaggtatcatattcggttctctctagttgtcaatttaagtggactaa 5596280  T
Q  291 ttta 294  Q
    ||||    
T  5596281 ttta 5596284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 265
Target Start/End: Complemental strand, 16173056 - 16172982
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    ||||||||||||  ||||| || |||||||| ||||| ||||||||||||| ||  |||||||| |||||||||||    
T  16173056 ccacttgggttggcctggtagtgttggcttgagaccttggagtgtgctcct-ctcaaggtctcaggttcgattctc 16172982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 290
Target Start/End: Complemental strand, 21236499 - 21236464
Alignment:
Q  255 gttcgattctctctagtgtcaatttaaatgggctaa 290  Q
    ||||||||||||||||||||||||| ||||||||||    
T  21236499 gttcgattctctctagtgtcaatttcaatgggctaa 21236464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 36958195 - 36958116
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctcta 269  Q
    |||||||||||| | |||||| ||||||||| ||  | |||||||| ||||| | || |||||| |||||||||||||||    
T  36958195 ccacttgggttgatatggtgggattggcttgagatttgggagtgtgttcctcatcgaagtctcaggttcgattctctcta 36958116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 40461686 - 40461576
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||||||| ||||||||||||  |||| ||| |  ||||||||| |||||  |||||||| ||| ||| ||| ||  ||  ||||||| |||||||    
T  40461686 ccacttgggttgatctggtggtattaacttgagacttgagagtgtgcttctcctcaaggtctcaggttagatcctc-ctgatgcaaatttaagtgggcta 40461588  T
Q  290 atttaacttctt 301  Q
    ||||||||||||    
T  40461587 atttaacttctt 40461576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 232 - 294
Target Start/End: Original strand, 12669517 - 12669579
Alignment:
Q  232 tgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    |||||| || ||| |||| |||||||||||||||||| |||||||||||  ||||||| ||||    
T  12669517 tgtgcttcttcttaaggtttcaagttcgattctctctggtgtcaatttaggtgggctagttta 12669579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 211 - 301
Target Start/End: Original strand, 28285276 - 28285366
Alignment:
Q  211 tattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||| || |||| | |||| ||||||||||  |||| ||  |||||||||| ||||||||||||||   |||||||||||| ||||||    
T  28285276 tattggcatgggaccgaagagtttgctcctcctcaaggtatcgggttcgattctttctagtgtcaatttgggtgggctaatttagcttctt 28285366  T

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Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 4964040 - 4963983
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattct 264  Q
    |||||||||||||| |||||| |||||| ||| | ||| | |||||||||||||||||    
T  4964040 gtggtattggcttgagacctacgagtgtactctttcttaaagtctcaagttcgattct 4963983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 11352044 - 11352097
Alignment:
Q  248 gtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||||||||| |||||||||||  ||| | ||||||| ||||||    
T  11352044 gtctcaagttcgattctctccagtgtcaatttggatgagttaatttatcttctt 11352097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 301
Target Start/End: Complemental strand, 18206681 - 18206608
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||||||| ||||  ||  ||||| ||||||||||| ||||||   |||||||||||| ||||||    
T  18206681 ggagtgtgctcctcctttaggttccagattcgactctctctagtgccaatttgggtgggctaatttagcttctt 18206608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 19949686 - 19949578
Alignment:
Q  192 acttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaat 291  Q
    ||||||||||   ||||||||||| |||| || |||| |||||||||||||| ||| ||||| |||| ||| || |  ||||||||||  || | |||||    
T  19949686 acttgggttgacttggtggtattgacttgagatctag-agtgtgctcctcctcgagctctcaggttcaattttcaccggtgtcaatttggatagactaat 19949588  T
Q  292 ttaacttctt 301  Q
    ||||||||||    
T  19949587 ttaacttctt 19949578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 301
Target Start/End: Original strand, 25979211 - 25979284
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||| ||||||||  |||||||| ||||||||||||||  ||||||||| |  ||| ||||||| ||||||    
T  25979211 ggagtgttctcctcctcaaggtctcaggttcgattctctcttatgtcaatttgatggggttaatttagcttctt 25979284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 29692455 - 29692406
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctcct 243  Q
    |||||||| |||||||||||||| ||| || || ||||||||||||||||    
T  29692455 ttgggttggtctggtggtattggattgggatctgggagtgtgctcctcct 29692406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 2e-23; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 190 - 298
Target Start/End: Complemental strand, 19703560 - 19703452
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  || |||||||||||||| |||||  |||||||||||||||  |||||||| ||||||||||| |||||||||||| |  |||||||    
T  19703560 ccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccctagtgtcaattaaggtgggcta 19703461  T
Q  290 atttaactt 298  Q
    |||||||||    
T  19703460 atttaactt 19703452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 968365 - 968476
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||| ||||  ||||||||||||||||| ||||| |||||||||||||||| ||||||||| |||||||||||||   || |||||||  |||||||    
T  968365 ccacttgagttggcctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctccgatgccaatttaggtgggcta 968464  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  968465 atttagcttctt 968476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 16852343 - 16852454
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  || |||||||||||||| ||||| |||||||||||||||| ||||||||| |||||||||||  ||||| |||||||  |||||||    
T  16852343 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctccttagtgccaatttaggtgggcta 16852442  T
Q  290 atttaacttctt 301  Q
     |||| ||||||    
T  16852443 ttttagcttctt 16852454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 198 - 301
Target Start/End: Complemental strand, 40791960 - 40791857
Alignment:
Q  198 gttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaact 297  Q
    ||||| |||||||||||||| || |||||  || ||||||||||||||| |||| | |||||||| |||||||||||||||||| |||||||||||| ||    
T  40791960 gttgtcctggtggtattggcctgggacctcagaatgtgctcctccttgaagtcttaggttcgattttctctagtgtcaatttaagtgggctaatttagct 40791861  T
Q  298 tctt 301  Q
    ||||    
T  40791860 tctt 40791857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 184 - 301
Target Start/End: Original strand, 34986099 - 34986211
Alignment:
Q  184 atcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaat 283  Q
    ||||| ||||||||||||||||||||||||||| ||| ||||| |||||      ||||||||||||||| |||| |||||||| ||| ||||||||| |    
T  34986099 atcaacccacttgggttgttctggtggtattggtttgggacctgggagta-----ctccttgaggtctcaggttcaattctctccagtatcaatttaatt 34986193  T
Q  284 gggctaatttaacttctt 301  Q
     |||||||||||||||||    
T  34986194 tggctaatttaacttctt 34986211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 185 - 301
Target Start/End: Original strand, 29431009 - 29431125
Alignment:
Q  185 tcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatg 284  Q
    |||| ||||||||||||  |||| |||||||||||| ||| | ||||||||||||||||||||| |||| |||||||||||| | |||  ||||| | ||    
T  29431009 tcaacccacttgggttggcctggcggtattggcttgggacttgggagtgtgctcctccttgaggcctcaggttcgattctctttggtgctaatttgagtg 29431108  T
Q  285 ggctaatttaacttctt 301  Q
    |||||||||| ||||||    
T  29431109 ggctaatttagcttctt 29431125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 8485002 - 8485113
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  ||||||||||| ||||| |||||  ||||||||||||| |||||||||||  ||||||||||||  ||| |||||||  |||||||    
T  8485002 ccacttgggttggcctggtggtatttgcttgggacctgtgagtgtgctcctctttgaggtctcattttcgattctctccggtgccaatttaggtgggcta 8485101  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  8485102 atttagcttctt 8485113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 31087331 - 31087220
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||||  |||| |||||||||| || || ||||| | | |||||| ||||||||| |||||||| ||||  |||||||||||||| |||||    
T  31087331 ccacttgggttgtttcggtgatattggcttgggatctgggagtatccccctcctcgaggtctcaggttcgattatctccggtgtcaatttaaataggcta 31087232  T
Q  290 atttaacttctt 301  Q
    ||||||||||||    
T  31087231 atttaacttctt 31087220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 207 - 301
Target Start/End: Original strand, 6536540 - 6536634
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||| |||| ||||||||| ||| |||||||  |||| ||||||| ||||||    
T  6536540 gtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttaggtgggttaatttagcttctt 6536634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 190 - 299
Target Start/End: Complemental strand, 35641974 - 35641865
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||||||| ||||||||||| |||||| ||  | |||||||||||||||| || |||||| ||||||||||||| ||   ||||||| ||||||||    
T  35641974 ccacttgggttggtctggtggtatcggcttgagatttgggagtgtgctcctcctcgatgtctcaggttcgattctctccagaaccaatttagatgggcta 35641875  T
Q  290 atttaacttc 299  Q
    ||||| ||||    
T  35641874 atttagcttc 35641865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 23361722 - 23361618
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  |||||||||||| |||| ||  | ||||||||||||||||  |||||||| |||| ||||||||| |||||||||||  |||||||    
T  23361722 ccacttgggttgacctggtggtattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgtcaatttaggtgggcta 23361623  T
Q  290 attta 294  Q
    |||||    
T  23361622 attta 23361618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 194 - 301
Target Start/End: Original strand, 11819783 - 11819890
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    ||||||||  || ||||||| |||||| ||| | ||||||||||||||||  |||||||| ||||||||| |||||||||||||||   |||||||||||    
T  11819783 ttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattcactctagtgtcaatttgggtgggctaattt 11819882  T
Q  294 aacttctt 301  Q
    | ||||||    
T  11819883 agcttctt 11819890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 194 - 301
Target Start/End: Original strand, 27750737 - 27750844
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    ||||||||  || ||||||| |||||| ||| | ||||||||||||||||  |||||||| ||||||||| |||||||||||||||  |||| |||||||    
T  27750737 ttgggttgccctcgtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatggactaattt 27750836  T
Q  294 aacttctt 301  Q
    | ||||||    
T  27750837 agcttctt 27750844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 44780187 - 44780076
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  || |||| ||||||||| ||| | ||||||||||||||||  |||||||| ||| ||||| |||||||||||||||   |||||||    
T  44780187 ccacttgggttggcctagtggcattggcttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaatttgggtgggcta 44780088  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  44780087 atttagcttctt 44780076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 184 - 301
Target Start/End: Original strand, 26688862 - 26688979
Alignment:
Q  184 atcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaat 283  Q
    ||||| ||||||||||||  |||||||| |||||||| ||||| ||||||||||||||||  |||||||| ||||  ||||  |||||||||||||   |    
T  26688862 atcaacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcaggttcagttcttcctagtgtcaatttgggt 26688961  T
Q  284 gggctaatttaacttctt 301  Q
    |||||| |||| ||||||    
T  26688962 gggctagtttagcttctt 26688979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 3624583 - 3624686
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  || |||||||||||||| ||||| |||||||||||||| |  |||||||| |||||||||||||  | |||||||||  |||||||    
T  3624583 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctctc-cgggtcaatttaggtgggcta 3624681  T
Q  290 attta 294  Q
    |||||    
T  3624682 attta 3624686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 205 - 301
Target Start/End: Complemental strand, 15948107 - 15948011
Alignment:
Q  205 tggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||||| ||| | ||||| |||||||||| || |||  | ||||||||||||| ||||||| ||||| |||||||||||| ||||||    
T  15948107 tggtggtattggcttgggacttgggagtatgctcctcctcgatgtcataggttcgattctctccagtgtcattttaagtgggctaatttaccttctt 15948011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 18540301 - 18540412
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  || |||||||||||||| ||||| ||||||| || |||||  |||||||| |||||||||||||| ||| |||||| |  ||| ||    
T  18540301 ccacttgggttggcctagtggtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctctggtgccaatttgagagggtta 18540400  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  18540401 atttagcttctt 18540412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 23874455 - 23874345
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  || |||||||||||||| ||||| ||| | ||| |||||| ||||||||| ||||| ||||  |||||| |||||||  |||||||    
T  23874455 ccacttgggttggcctagtggtattggcttgggacctgggaatctgcgcctcctcgaggtctcaggttcg-ttcttcctagtgacaatttaggtgggcta 23874357  T
Q  290 atttaacttctt 301  Q
    ||||||||||||    
T  23874356 atttaacttctt 23874345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 265
Target Start/End: Original strand, 28783063 - 28783138
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    ||||||||||||   |||||||||||||||| ||||| ||||||||||||||||  |||||||| |||||||||||    
T  28783063 ccacttgggttggcttggtggtattggcttgagacctgggagtgtgctcctcctcaaggtctcatgttcgattctc 28783138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 33727906 - 33727835
Alignment:
Q  230 agtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||||  |||||||| ||||||||| |||||||||||||||  ||||||||||||| ||||||    
T  33727906 agtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatgggctaatttagcttctt 33727835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 211 - 294
Target Start/End: Complemental strand, 43594370 - 43594287
Alignment:
Q  211 tattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    |||||||||  || |||||| |||| |||||||  |||||||| |||||||||||||||||||||||||  |||||||||||||    
T  43594370 tattggcttaggatctaggaatgtgttcctcctcaaggtctcaggttcgattctctctagtgtcaatttggatgggctaattta 43594287  T

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Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 43969071 - 43968960
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||   || ||||||||||||| | | ||||||||||||||||| ||||||||||  ||||||| ||||| |||| ||||||  ||| |||    
T  43969071 ccacttgggttggcatgatggtattggcttggggcttaggagtgtgctcctccctgaggtctcagattcgattatctctggtgttaatttaggtggacta 43968972  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  43968971 atttatcttctt 43968960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 263
Target Start/End: Complemental strand, 29858122 - 29858049
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattc 263  Q
    |||||||| |||  ||||||||||||||||| ||||  |||||||||||||||| ||||||||| |||||||||    
T  29858122 ccacttggattggcctggtggtattggcttgggaccagggagtgtgctcctcctcgaggtctcaggttcgattc 29858049  T

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Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 207 - 292
Target Start/End: Complemental strand, 35690120 - 35690035
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatt 292  Q
    |||||||||||||| || || || || ||||||||||  |||||||| |||||||||||||| |||||||||||| | ||||||||    
T  35690120 gtggtattggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttaagtaggctaatt 35690035  T

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Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 11492127 - 11492035
Alignment:
Q  209 ggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||| || || ||||||||||||| || ||||||| | ||||||||||||  |||||||||||   |||||||||||| ||||||    
T  11492127 ggtattggcttgagatctgggagtgtgctccttctcgaggtcttaggttcgattctcttcagtgtcaatttgggtgggctaatttagcttctt 11492035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 217 - 301
Target Start/End: Original strand, 27979187 - 27979271
Alignment:
Q  217 cttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||| ||||| ||||| || |||||||  | |||| |||||||||| ||||||||||||||||  ||||||||||||||||||||    
T  27979187 cttgagaccttggagtttgttcctcctcaaagtcttaagttcgattatctctagtgtcaatttggatgggctaatttaacttctt 27979271  T

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Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 217 - 301
Target Start/End: Original strand, 28036456 - 28036540
Alignment:
Q  217 cttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||| ||||| ||||| || |||||||  | |||| |||||||||| ||||||||||||||||  ||||||||||||||||||||    
T  28036456 cttgagaccttggagtttgttcctcctcaaagtcttaagttcgattatctctagtgtcaatttggatgggctaatttaacttctt 28036540  T

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Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 30483965 - 30483846
Alignment:
Q  182 taatcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaa 281  Q
    ||||||| ||||||||||||  |  |||||||||||||| ||  | ||||||||||||||||    |||||| |||| ||||||||| ||| |||||| |    
T  30483965 taatcaacccacttgggttggcccagtggtattggcttgggatatgggagtgtgctcctcctcagagtctcaggttcaattctctcttgtgccaatttga 30483866  T
Q  282 atgggctaatttaacttctt 301  Q
    |||| |||||||| ||||||    
T  30483865 atggactaatttatcttctt 30483846  T

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Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 187 - 301
Target Start/End: Original strand, 36205195 - 36205307
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatggg 286  Q
    ||||||||||||||| |||| || |||||| ||| || || ||||||||||||||||  |||||||| ||||||||||| |    ||||||||| ||||     
T  36205195 aatccacttgggttggtctgatgttattggtttgagatctgggagtgtgctcctcctcaaggtctcatgttcgattctccc--cggtcaatttagatgga 36205292  T
Q  287 ctaatttaacttctt 301  Q
    |||||||| ||||||    
T  36205293 ctaatttagcttctt 36205307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 6436628 - 6436550
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctct 268  Q
    ||||||||||||  ||||||||||||||||| ||| |||||||||||||||||   ||||||||  |||||||| ||||    
T  6436628 ccacttgggttgccctggtggtattggcttgggacttaggagtgtgctcctccgcaaggtctcagattcgattccctct 6436550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 301
Target Start/End: Complemental strand, 34966926 - 34966812
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatggg 286  Q
    |||||||||| |||| |||| ||||||||||||| ||| | |||||||||| ||| | ||||||||||||| |||| || |  ||| || ||||  ||||    
T  34966926 aatccacttgagttggtctgatggtattggcttgagacttgggagtgtgctactcttcgaggtctcaagtttgattatccccggtggcattttaggtggg 34966827  T
Q  287 ctaatttaacttctt 301  Q
    |||||||| ||||||    
T  34966826 ctaatttagcttctt 34966812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 6569844 - 6569755
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||| |||||  || ||| |||||||||| || || ||||||||||||||||| |||| ||| |||||||||||| | ||||||||||    
T  6569844 ccacttaggttggcctagtgatattggcttgggatctgggagtgtgctcctcctttaggtttcatgttcgattctctttggtgtcaattt 6569755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 196 - 281
Target Start/End: Original strand, 12281503 - 12281588
Alignment:
Q  196 gggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaa 281  Q
    |||||||||| |||||||||||||| |||||  |||||||| |||||| |||||||||  ||||||| ||||   |||||||||||    
T  12281503 gggttgttcttgtggtattggcttgggacctgagagtgtgcccctcctcgaggtctcagattcgattttctccgatgtcaatttaa 12281588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 2203495 - 2203599
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  || |||||||||||||| ||||| ||||||||||||||||  |||||||| | || |||||| |  ||| ||||||   |||||||    
T  2203495 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcagggtcaattctccccggtgccaatttgggtgggcta 2203594  T
Q  290 attta 294  Q
    |||||    
T  2203595 attta 2203599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 3129872 - 3129828
Alignment:
Q  255 gttcgattctctctagtgtcaatttaaatgggctaatttaacttc 299  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||    
T  3129872 gttcgattctctctagtgtcaatttaagtgggctaatttagcttc 3129828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 5801050 - 5801153
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  ||||||||||| ||||| || |||||||||||||||  || || ||||||||||||| ||||||  | || ||||||  |||||||    
T  5801050 ccacttgggttgacctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctcaagttcga-tctctcctgggttaatttaggtgggcta 5801148  T
Q  290 attta 294  Q
    |||||    
T  5801149 attta 5801153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 7347887 - 7347951
Alignment:
Q  237 tcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||| ||| |||| ||||||||| |||||||||||  |||||||||||| ||||||    
T  7347887 tcctccttgaggtttcaggttcaattctctcttgtgtcaatttaggtgggctaatttagcttctt 7347951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 31408156 - 31408084
Alignment:
Q  229 gagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||||  |||| ||| ||||||||||||||| |||||||||||  ||| ||||||| ||||||    
T  31408156 gagtgtgctcctcctcaaggtttcaggttcgattctctctaatgtcaatttaagggggttaatttagcttctt 31408084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 6530810 - 6530861
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctc 241  Q
    ||||||||||||  |||||||| |||||||| ||||||||||||||||||||    
T  6530810 ccacttgggttggcctggtggtgttggcttgggacctaggagtgtgctcctc 6530861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 210 - 300
Target Start/End: Complemental strand, 3305241 - 3305151
Alignment:
Q  210 gtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttct 300  Q
    ||||||| ||| || || |||| |||||||||||  ||||||||| ||||||| ||||| ||| |||||||  |||||||||||| |||||    
T  3305241 gtattggtttgggatctgggagcgtgctcctcctcaaggtctcaaattcgattatctctggtgccaatttaggtgggctaatttatcttct 3305151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 301
Target Start/End: Original strand, 7140726 - 7140822
Alignment:
Q  204 ctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||||||| || || || ||||||||||||| ||| |||||  ||||||||||||  || |||||||   |||||||||||| ||||||    
T  7140726 ctggtggtattggcttgggatctgggtgtgtgctcctcctcgagctctcagattcgattctctc-ggtatcaatttgggtgggctaatttaccttctt 7140822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 301
Target Start/End: Complemental strand, 20994536 - 20994419
Alignment:
Q  185 tcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcct-ccttgaggtctcaagttcgattctctctagtgtcaatttaaat 283  Q
    |||| ||||||||||||  || ||||||||| |||| ||||| ||||||||||||| |||  | |||||| | |||||| ||||| ||  ||||||  ||    
T  20994536 tcaacccacttgggttggcctagtggtattgacttgggacctgggagtgtgctcctccctcaaagtctcaggatcgattatctctggtaccaatttggat 20994437  T
Q  284 gggctaatttaacttctt 301  Q
    ||||||||||| ||||||    
T  20994436 gggctaatttagcttctt 20994419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 33017217 - 33017306
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||  || ||  ||||||||||  |||| | ||||||||||||||  |||||||| |||||||||||||| ||| ||||||    
T  33017217 ccacttgggttggccttgtcatattggcttggaacctggaagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 33017306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 24351762 - 24351690
Alignment:
Q  229 gagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||| ||||||||||||||||||||||| |||||||   || |||||||  ||| ||||||||| ||||||    
T  24351762 gagtgtactcctccttgaggtctcaagttcaattctcttcggtatcaatttggatgagctaatttagcttctt 24351690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 33692374 - 33692315
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtct 251  Q
    ||||||||||| | |||||||||||||||| ||| |||||| |||||||||||| ||||||    
T  33692374 cacttgggttggtttggtggtattggcttgagacataggag-gtgctcctccttaaggtct 33692315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 5264547 - 5264610
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctca 253  Q
    ||||||||||||  || ||||||||||||||  |||| ||| |||||||||||| |||||||||    
T  5264547 ccacttgggttggcctagtggtattggcttggaacctgggaatgtgctcctcctcgaggtctca 5264610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 11928764 - 11928693
Alignment:
Q  230 agtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||| ||||||||| ||||||||||  |   |||||||||  ||||| ||||||||||||||    
T  11928764 agtgtgctcctcctcgaggtctcaggttcgattcttaccgatgtcaatttggatgggttaatttaacttctt 11928693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 265
Target Start/End: Complemental strand, 18546443 - 18546360
Alignment:
Q  182 taatcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||| ||||||||| ||||| ||| |||||||||  ||| |||||  |||  |||||||||| ||||||||| |||||||||||    
T  18546443 taattaatccacttaggttggtctagtggtattgatttgggacctgagagcatgctcctcctcgaggtctcaggttcgattctc 18546360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 301
Target Start/End: Original strand, 27871695 - 27871782
Alignment:
Q  214 tggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||| || || ||||| || |||||||  | |||||||||||||||||||||| | ||||||| | || |||| |||||||||||    
T  27871695 tggcttgggatcttggagtttgttcctcctcaaagtctcaagttcgattctctctaatatcaatttgagtgagctagtttaacttctt 27871782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 28560607 - 28560713
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatggg 286  Q
    |||||||||||||||  || |||||||||| ||| |||||  ||||||||||||  || | | |||| ||||||||||||||||||  ||||||  ||||    
T  28560607 aatccacttgggttgaactagtggtattggtttgggaccttagagtgtgctcct-tttcaaggctcatgttcgattctctctagtgctaatttaggtggg 28560705  T
Q  287 ctaattta 294  Q
     |||||||    
T  28560706 ttaattta 28560713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 301
Target Start/End: Original strand, 35826318 - 35826425
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    ||||||||  || |||||| ||||||| |||||  |||||||||||||||| | || ||   |||||||||| |  |||||||||||  ||| |||||||    
T  35826318 ttgggttggcctagtggtagtggcttgagacctgtgagtgtgctcctccttaaagtttcggattcgattctcaccggtgtcaatttaggtggactaattt 35826417  T
Q  294 aacttctt 301  Q
    ||||||||    
T  35826418 aacttctt 35826425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 301
Target Start/End: Complemental strand, 36034538 - 36034483
Alignment:
Q  246 aggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||| |||||||||| |||||||||||  |||||||||| | ||||||    
T  36034538 aggtctcaagtttgattctctctggtgtcaatttaggtgggctaattaagcttctt 36034483  T

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Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 8794401 - 8794327
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaa 281  Q
    ||||||||||||||  |||| | ||||||||||||||   ||||||| |||||||||||||| ||  ||||||||    
T  8794401 gtggtattggcttggaacctggaagtgtgctcctcctcagggtctcaggttcgattctctctggtaccaatttaa 8794327  T

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Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 264
Target Start/End: Complemental strand, 11793594 - 11793520
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattct 264  Q
    |||||||||||| ||| ||||| || ||||| ||||| ||||||||||||||||  |||||| | ||| ||||||    
T  11793594 ccacttgggttggtcttgtggtgttcgcttgggaccttggagtgtgctcctcctcaaggtcttaggtttgattct 11793520  T

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Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 260
Target Start/End: Original strand, 18030187 - 18030253
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcga 260  Q
    |||||||  |||||||||||||||||||| ||| ||| |||||||||||| ||  ||||| ||||||    
T  18030187 ttgggttagtctggtggtattggcttgcggcctcggaatgtgctcctcctcgatatctcaggttcga 18030253  T

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Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 264
Target Start/End: Original strand, 18897169 - 18897243
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattct 264  Q
    ||||||||||||  || ||||| |||| ||| |||||  |||||||||||||||  |||||||| ||||||||||    
T  18897169 ccacttgggttggcctagtggtgttggtttgggaccttagagtgtgctcctcctcaaggtctcatgttcgattct 18897243  T

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Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 301
Target Start/End: Complemental strand, 30774796 - 30774698
Alignment:
Q  203 tctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||| ||| || || | |||||| ||||||| |||||||||  ||||||| ||||   || |||||||| || ||||||||| ||||||    
T  30774796 tctggtggtattggtttgggatctggaagtgtgttcctcctcgaggtctcagattcgattttctccgatgccaatttaagtgagctaatttagcttctt 30774698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 255 - 301
Target Start/End: Complemental strand, 44595863 - 44595817
Alignment:
Q  255 gttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||| ||||||||||||| |||| |||||||| ||||||    
T  44595863 gttcgattctctttagtgtcaatttagatggactaatttagcttctt 44595817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 301
Target Start/End: Original strand, 10287484 - 10287589
Alignment:
Q  196 gggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaa 295  Q
    |||||| |||||| |||||||||||  | || | |||||||| ||||| ||||||||| |||| ||||||  |  | ||||||||  ||||||||||||     
T  10287484 gggttggtctggtagtattggcttgaaatctggaagtgtgcttctcctcgaggtctcaggttcaattctcctttatatcaatttaggtgggctaatttat 10287583  T
Q  296 cttctt 301  Q
    ||||||    
T  10287584 cttctt 10287589  T

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Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 12988431 - 12988520
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||| |||  || ||||||||||||||  |||| | ||||||||||||||  |||| ||| ||||||| |||||| ||| ||||||    
T  12988431 ccacttggattggcctagtggtattggcttggaacctggaagtgtgctcctcctcaaggtttcaggttcgatcctctctggtgccaattt 12988520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 16843829 - 16843768
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||||||||||   || ||||| |||||||||||||  ||||||||||| ||||||||    
T  16843829 ggagtgtgctcctccgcaagatctcaggttcgattctctccggtgtcaatttagatgggcta 16843768  T

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Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 267
Target Start/End: Complemental strand, 22269006 - 22268930
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctc 267  Q
    ||||||||||||  |||||||| |||||||| ||||| |||||||||| || ||  |||||||||||| |||| ||||    
T  22269006 ccacttgggttggcctggtggtgttggcttgggaccttggagtgtgct-cttctcaaggtctcaagtttgattttctc 22268930  T

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Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 267
Target Start/End: Original strand, 35287719 - 35287796
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctc 267  Q
    |||||||||| |  |||||||| |||||||| ||  | ||||||||||||||||  |||| ||| |||||||||||||    
T  35287719 ccacttgggtaggcctggtggtgttggcttgagattttggagtgtgctcctcctcaaggtatcatgttcgattctctc 35287796  T

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Target: scaffold0074 (Bit Score: 56; Significance: 8e-23; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 210 - 301
Target Start/End: Complemental strand, 45812 - 45721
Alignment:
Q  210 gtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||| |||| |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||  |||| || |||||||||||    
T  45812 gtattgccttgggacctaggagtgtgttcctccttgaggtctcatgttcgattctctctggtgtcaatttaggtgggttagtttaacttctt 45721  T

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Target: chr2 (Bit Score: 56; Significance: 8e-23; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 7799108 - 7798998
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||| ||||||||||||||||| ||| | |||||||||||||||| ||| |||||  |||||||||||| |||| |||||||| | |||||    
T  7799108 ccacttgggttgtcctggtggtattggcttgggacttgggagtgtgctcctcctcgagatctcagattcgattctctccagtgccaatttaagt-ggcta 7799010  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  7799009 atttagcttctt 7798998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 19016034 - 19016145
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||||||| |||| ||||||||||||| ||| | |||||||||||||||| ||||||||||||| ||||||| |  ||| |||||||| | |||||    
T  19016034 ccacttgggttggtctgatggtattggcttgagacttgggagtgtgctcctcctcgaggtctcaagtttgattctccccggtgccaatttaagtaggcta 19016133  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  19016134 atttagcttctt 19016145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 7667550 - 7667431
Alignment:
Q  182 taatcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaa 281  Q
    |||| ||||||||||||||| || |||| |||||||||| ||| | |||||||||||||||||||| ||||  | ||||||||  ||| |||||||||      
T  7667550 taattaatccacttgggttggtcgggtgatattggcttgggacttgggagtgtgctcctccttgagatctccggctcgattcttactaatgtcaattttg 7667451  T
Q  282 atgggctaatttaacttctt 301  Q
    |||| |||||||||||||||    
T  7667450 atggactaatttaacttctt 7667431  T

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Target: chr2; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 8162134 - 8162027
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    ||||||| | ||||||||||| ||||| |||||  || |||| ||||||||||||||||||||| ||||||||| ||||||||||||| ||  |||||||    
T  8162134 ttgggttatcctggtggtattagcttgggacctgagaatgtgttcctccttgaggtctcaagttggattctctccagtgtcaatttaagtgaactaattt 8162035  T
Q  294 aacttctt 301  Q
    | ||||||    
T  8162034 agcttctt 8162027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 35710394 - 35710505
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||| |||| |||||||| |||| |||| ||| |||||||||| ||||| ||||||||||| |||||||||||| |||| ||||||||  | |||||    
T  35710394 ccacttgagttgatctggtgggattgacttgagacttaggagtgtgttcctctttgaggtctcatgttcgattctctgtagtatcaatttaggttggcta 35710493  T
Q  290 atttaacttctt 301  Q
     |||||||||||    
T  35710494 gtttaacttctt 35710505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 21213777 - 21213847
Alignment:
Q  195 tgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    ||||||| |||||||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||||    
T  21213777 tgggttggtctggtggtattggcttgggacctgggagtgtgttcctccttgaggtctcaggttcgattctc 21213847  T

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Target: chr2; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 33582015 - 33582087
Alignment:
Q  229 gagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||  ||| |||||||| ||||||    
T  33582015 gagtgtgctcctccttgaggtctcaggttcgattctctctaatgtcaatttaggtggactaatttagcttctt 33582087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 191 - 294
Target Start/End: Original strand, 3001383 - 3001486
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaa 290  Q
    |||||||||||  || ||||||||| |||| || ||||||||||||||||||||||| ||||| |||||||| ||||| ||| || ||||  ||||||||    
T  3001383 cacttgggttggcctagtggtattgacttgagatctaggagtgtgctcctccttgagatctcaggttcgattatctctggtgccagtttatgtgggctaa 3001482  T
Q  291 ttta 294  Q
    ||||    
T  3001483 ttta 3001486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 21195745 - 21195638
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    ||||||||  || ||||||| ||||||  || | ||||||||||||||||  |||||||| ||||||||| |||||||||||||||  ||||||||||||    
T  21195745 ttgggttgccctagtggtataggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatgggctaattt 21195646  T
Q  294 aacttctt 301  Q
    | ||||||    
T  21195645 agcttctt 21195638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 29503274 - 29503384
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  || |||||||||| ||| ||||| ||||||||||||||||  |||||||| ||||||||||| |  |||||||||||| ||||| |    
T  29503274 ccacttgggttggcctagtggtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc-ccggtgtcaatttaagtgggcaa 29503372  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  29503373 atttagcttctt 29503384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 37756044 - 37755933
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||   |||||||||||||||| ||||| ||| ||||||||| || |||||||||||||||| || ||||  || |||||| | |||||||    
T  37756044 ccacttgggttggcttggtggtattggcttgggacctgggaatgtgctcctactcgaggtctcaagttcgactccctctgatgccaatttgagtgggcta 37755945  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  37755944 atttagcttctt 37755933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 186 - 301
Target Start/End: Complemental strand, 41505012 - 41504898
Alignment:
Q  186 caatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgg 285  Q
    |||||||||||| |||||| ||||||||||||||| ||||| ||||| |||||||||| ||  ||||   ||||||||||||  |||||||||||| |||    
T  41505012 caatccacttgg-ttgttcgggtggtattggcttgggacctgggagtatgctcctcctcgatatctccgattcgattctctccggtgtcaatttaagtgg 41504914  T
Q  286 gctaatttaacttctt 301  Q
    | ||||||| ||||||    
T  41504913 gttaatttagcttctt 41504898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 19244112 - 19244216
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||||||||| |||  |||||||| |||| |||||  ||||||||||||||   |||||||| |||||||||||||| ||| |||||| | |||||||    
T  19244112 ccacttgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcaggttcgattctctctggtgccaatttgagtgggcta 19244211  T
Q  290 attta 294  Q
    |||||    
T  19244212 attta 19244216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 190 - 298
Target Start/End: Complemental strand, 29197449 - 29197341
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||   ||||||||||| |||| ||| | ||||||||||||||||||| |||||| ||||||||||  |  ||| |||||||  |||||||    
T  29197449 ccacttgggttggcttggtggtattgacttgggacttgggagtgtgctcctccttgatgtctcatgttcgattcttcccggtgccaatttaggtgggcta 29197350  T
Q  290 atttaactt 298  Q
    |||||||||    
T  29197349 atttaactt 29197341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 39714995 - 39715099
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||   ||||||||||| |||| ||||| |||||||||||||||| ||||||||| ||||||||||| | ||   |||||||  |||||||    
T  39714995 ccacttgggttggcatggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagcaccaatttaggtgggcta 39715094  T
Q  290 attta 294  Q
    |||||    
T  39715095 attta 39715099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 190 - 266
Target Start/End: Complemental strand, 42327468 - 42327392
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctct 266  Q
    ||||||||||||  || |||||||||||||| ||||| ||||||||||||||||  |||||||| ||||||||||||    
T  42327468 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctct 42327392  T

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Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 207 - 298
Target Start/End: Original strand, 11251107 - 11251198
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaactt 298  Q
    |||||||||||||| ||| | | ||||||||||||||  |||||||| ||| |||||||||| |||||||||||  || |||||||||||||    
T  11251107 gtggtattggcttgggacttggaagtgtgctcctcctcaaggtctcaggtttgattctctctggtgtcaatttaggtgtgctaatttaactt 11251198  T

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Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 265
Target Start/End: Original strand, 37480078 - 37480153
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    ||||||||||||  ||||||||||||||||| |||||  |||||||||||||||  |||||||| |||||||||||    
T  37480078 ccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctc 37480153  T

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Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 193 - 263
Target Start/End: Complemental strand, 12994446 - 12994376
Alignment:
Q  193 cttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattc 263  Q
    |||| |||| ||| ||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||||    
T  12994446 cttgagttggtctagtggtattgacttgggacctgggagtgtgctcctccttaaggtctcaagttcgattc 12994376  T

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Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 231 - 301
Target Start/End: Complemental strand, 13519084 - 13519014
Alignment:
Q  231 gtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||  ||||| ||  ||||||||||    
T  13519084 gtgtgctcctccttgaggtctcaagttcgattctctctaatttcaattttgatgggttagcttaacttctt 13519014  T

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Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 19322771 - 19322860
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||||||| ||| |||||||||| ||| ||||| |||||||||||||| |  |||||||  ||| |||||||||||||| ||||||    
T  19322771 ccacttgggttgatctagtggtattggtttgggacctgggagtgtgctcctcttcaaggtctctggtttgattctctctagtgccaattt 19322860  T

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Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 40416463 - 40416374
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||  || ||||||||| ||||  |||| ||||| ||||||||||| |||||||| |||||||||||||| ||| ||||||    
T  40416463 ccacttgggttggcctagtggtattgacttggaacctgggagtatgctcctccttaaggtctcaggttcgattctctctggtgccaattt 40416374  T

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Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 23052596 - 23052492
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||| |||||  ||||||||||||||||| ||| | |||||||||| |||||  |||||||| ||||||||||| |||||| || |||   |||||||    
T  23052596 ccacttaggttggcctggtggtattggcttgggacttgggagtgtgcttctcctcaaggtctcaggttcgattctccctagtgccagtttgggtgggcta 23052497  T
Q  290 attta 294  Q
    |||||    
T  23052496 attta 23052492  T

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Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 207 - 279
Target Start/End: Complemental strand, 30410605 - 30410533
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||||||||| ||||||||||||||||||||||  ||| |||| |||||||| ||||| ||| ||||||    
T  30410605 gtggtattggcttgggacctaggagtgtgctcctcctcaaggactcatgttcgattttctctggtgccaattt 30410533  T

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Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 1435067 - 1435177
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||   | |||||| ||||||| ||  |||||||||||| |||||  |||||||| |||||||||||||| ||||||||||   |||||||    
T  1435067 ccacttgggttggcatagtggtactggcttgggatttaggagtgtgcttctcctcaaggtctca-gttcgattctctctggtgtcaatttgggtgggcta 1435165  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  1435166 atttagcttctt 1435177  T

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Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 42602557 - 42602668
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  || |||||||||||||| ||||| ||||||||||||| ||  |||||| | ||| |||||||||  ||| ||||||   |||||||    
T  42602557 ccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctccggtgccaatttgggtgggcta 42602656  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  42602657 atttagcttctt 42602668  T

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Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 42860365 - 42860424
Alignment:
Q  204 ctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattc 263  Q
    |||||| ||||| |||| ||||| |||||||||||||||| |||||||||||||||||||    
T  42860365 ctggtgatattgacttgagacctgggagtgtgctcctcctcgaggtctcaagttcgattc 42860424  T

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Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 13803502 - 13803576
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctct 268  Q
    |||||||| ||| ||| |||||||||| ||| ||||||||||||||||||  |||||||| |||||||| |||||    
T  13803502 ttgggttgatctagtgatattggcttgagacttaggagtgtgctcctcctcaaggtctcaggttcgattatctct 13803576  T

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Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 281
Target Start/End: Original strand, 24191842 - 24191932
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaa 281  Q
    |||||| ||||  ||| ||||||||||||| |||||  ||||||||||||||||||| ||||| | ||||||||| |  ||||||||||||    
T  24191842 cacttgagttggcctgatggtattggcttgggacctgagagtgtgctcctccttgagatctcatgatcgattctccccggtgtcaatttaa 24191932  T

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Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 203 - 301
Target Start/End: Complemental strand, 31573701 - 31573603
Alignment:
Q  203 tctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||| |||||| ||| || ||  |||||||||||||||||| |||||| ||||||||||||    ||||||||||  ||| |||||||||||||||    
T  31573701 tctggtgatattggtttgagatctgagagtgtgctcctccttgatgtctcaggttcgattctcttcgatgtcaatttaggtggactaatttaacttctt 31573603  T

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Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 42922417 - 42922507
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctcct-tgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||  || ||||||||||||||  |||| ||||||||||||||||   |||||||| |||||||||||||| ||| ||||||    
T  42922417 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgattctctctggtgccaattt 42922507  T

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Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 204 - 301
Target Start/End: Complemental strand, 12086188 - 12086091
Alignment:
Q  204 ctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||||||| ||||| | ||||||||||||||  |||||||  ||||||||| |||  |||  ||||||  |||||||||||| ||||||    
T  12086188 ctggtggtattggcttgggacctggaagtgtgctcctcctcaaggtctcgggttcgattccctccggtgctaatttaggtgggctaatttagcttctt 12086091  T

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Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 187 - 264
Target Start/End: Original strand, 32687481 - 32687558
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattct 264  Q
    ||||||||||||||||||| |||||||| | ||| ||| |  ||||||| ||||||| ||||||||| ||||||||||    
T  32687481 aatccacttgggttgttcttgtggtattagtttgggacttgagagtgtgttcctcctcgaggtctcaggttcgattct 32687558  T

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Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 301
Target Start/End: Complemental strand, 3677411 - 3677315
Alignment:
Q  205 tggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||||  || ||| |||| |||| ||||| ||||||| |||||||||||||||  || ||||||||| || | ||||||| ||||||    
T  3677411 tggtggtattggcttaggatctaagagtatgcttctcctcgaggtcttaagttcgattctctccggtatcaatttaagtgagttaatttagcttctt 3677315  T

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Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 266
Target Start/End: Original strand, 26545843 - 26545919
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctct 266  Q
    |||||||||||| | |||||||||| ||||| || || | ||||||||||| || ||||||||||||| ||||||||    
T  26545843 ccacttgggttggtttggtggtattagcttgggatctggaagtgtgctccttctcgaggtctcaagtttgattctct 26545919  T

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Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 262
Target Start/End: Original strand, 28846694 - 28846766
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgatt 262  Q
    |||||| ||||| ||| ||||||||| |||| ||||| |||||||||||||||| || |||||| ||||||||    
T  28846694 ccacttaggttgatctagtggtattgacttgggacctgggagtgtgctcctcctcgatgtctcaggttcgatt 28846766  T

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Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 39764988 - 39765040
Alignment:
Q  242 cttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    |||||||||||| ||||||||| ||||||||||||||||  ||||||||||||    
T  39764988 cttgaggtctcaggttcgattccctctagtgtcaatttagctgggctaattta 39765040  T

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Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 262
Target Start/End: Complemental strand, 41908711 - 41908639
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgatt 262  Q
    ||||||||||||  |||||||| | || ||| ||||| ||||||||||||||||  |||||||||||||||||    
T  41908711 ccacttgggttggcctggtggtgtcggtttgagaccttggagtgtgctcctcctcaaggtctcaagttcgatt 41908639  T

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Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 293
Target Start/End: Original strand, 26482096 - 26482198
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    |||||| |||||  ||| |||| |||||||| ||||||||||||||||||| ||  |||||||| |||||||||||   |||| |||||| | |||||||    
T  26482096 ccacttaggttggcctgatggtgttggcttgggacctaggagtgtgctcct-ctcaaggtctcaggttcgattctcctcagtgccaatttcagtgggcta 26482194  T
Q  290 attt 293  Q
    ||||    
T  26482195 attt 26482198  T

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Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 300
Target Start/End: Original strand, 30359657 - 30359766
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||   ||||||| |||||||| ||||| ||||||||||||||||  ||||||| | |||||||||| | |||| ||||||   |||||||    
T  30359657 ccacttgggttggcttggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctc-atttcgattctccccagtgccaatttgggtgggcta 30359755  T
Q  290 atttaacttct 300  Q
     |||| |||||    
T  30359756 gtttagcttct 30359766  T

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Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 1729819 - 1729908
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||  || |||||||||||||| ||| | ||||||||||||||||  |||||| |  || |||||||||| ||| ||||||    
T  1729819 ccacttgggttgggctagtggtattggcttgggacttgggagtgtgctcctcctctaggtcttagatttgattctctctggtgccaattt 1729908  T

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Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 301
Target Start/End: Original strand, 2295907 - 2296026
Alignment:
Q  185 tcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctcctt---gaggtctcaagttcgattctctctagtgtcaatttaa 281  Q
    |||| |||||| ||||| | || ||||||||||||| || || ||||||| ||||||||    |||||||||  ||||||| |||   |||||||||| |    
T  2295907 tcaacccacttaggttgatttgttggtattggcttgagatctgggagtgtactcctcctcctcgaggtctcagattcgattttcttcggtgtcaatttga 2296006  T
Q  282 atgggctaatttaacttctt 301  Q
    ||||||||||||| ||||||    
T  2296007 atgggctaatttagcttctt 2296026  T

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Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 279
Target Start/End: Complemental strand, 4060287 - 4060198
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||  || |||||||||| |||  ||||  ||||||||| |||||  || ||||| |||||||||||||| ||||||||||    
T  4060287 ccacttgggttggcctagtggtattggtttgaaacctgagagtgtgcttctcctcaagatctcaggttcgattctctctggtgtcaattt 4060198  T

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Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 7600039 - 7599978
Alignment:
Q  205 tggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctct 266  Q
    |||||| ||||||||| ||| || ||||||||||||||| ||||| ||| ||||||||||||    
T  7600039 tggtggcattggcttgagacttaagagtgtgctcctcctcgaggtttcatgttcgattctct 7599978  T

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Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 11062363 - 11062452
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||  || ||| ||||||||||  || | |||||||||| |||||  |||||||| ||| |||||||||| ||||||||||    
T  11062363 ccacttgggttggcctagtgatattggcttggaacttgggagtgtgcttctcctcaaggtctcaggtttgattctctcttgtgtcaattt 11062452  T

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Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 301
Target Start/End: Original strand, 18259747 - 18259844
Alignment:
Q  204 ctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||||||| ||  |  |||||||||||||||  |||||||| |||| | |||||| ||||||||| || |||| ||| |||| ||||||    
T  18259747 ctggtggtattggcttgagatttgagagtgtgctcctcctataggtctcaggttcaactctctccagtgtcaatctagatggactagtttaccttctt 18259844  T

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Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 301
Target Start/End: Original strand, 25637192 - 25637265
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||| || ||||||||| ||||| |||||||   || |||||||  |||||||||||||||||||    
T  25637192 ggagtgtgctccttctcgaggtctcaggttcggttctctccgatgccaatttaggtgggctaatttaacttctt 25637265  T

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Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 3661042 - 3660970
Alignment:
Q  229 gagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||| |||||| ||| ||||| ||||||||||||| | ||||||||||| ||| | |||||| ||||||    
T  3661042 gagtgtgcccctcctcgagatctcaggttcgattctctcaaatgtcaatttaagtggacaaatttagcttctt 3660970  T

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Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 4262354 - 4262298
Alignment:
Q  211 tattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctc 267  Q
    |||||||||| ||||| | ||||||||||||||  |||||||| |||||||||||||    
T  4262354 tattggcttgggacctggcagtgtgctcctcctcaaggtctcaggttcgattctctc 4262298  T

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Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 207 - 279
Target Start/End: Complemental strand, 17737680 - 17737608
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||||| ||| ||| | ||||||||||||||||  |||||||| |||||||| || |||||| ||||||    
T  17737680 gtggtattggtttgtgacttgggagtgtgctcctcctcaaggtctcatgttcgattatccctagtgccaattt 17737608  T

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Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 190 - 262
Target Start/End: Original strand, 18825344 - 18825415
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgatt 262  Q
    |||||||||||   |||||||| |||||||| ||||||||||||||||||| ||  |||||||||||| ||||    
T  18825344 ccacttgggtttacctggtggtgttggcttgggacctaggagtgtgctcct-ctcaaggtctcaagtttgatt 18825415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 190 - 266
Target Start/End: Complemental strand, 30808720 - 30808644
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctct 266  Q
    |||||||||||| ||||||| |||||||||| |||||  || | ||||||||||  ||||||||  |||||||||||    
T  30808720 ccacttgggttggtctggtgatattggcttgagacctgagaatatgctcctcctcaaggtctcagtttcgattctct 30808644  T

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Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 3697472 - 3697421
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctc 241  Q
    |||||||||||| |||| ||||||||||||| ||||| |||| |||||||||    
T  3697472 ccacttgggttggtctgatggtattggcttgggaccttggagagtgctcctc 3697421  T

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Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 27244343 - 27244422
Alignment:
Q  222 gacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||| ||||| |||||||||| ||||| | | ||||||||||||  ||||| ||||||| || ||||||||| ||||||    
T  27244343 gacctgggagtatgctcctcctcgaggtttaaggttcgattctcttcagtgttaatttaagtgagctaatttagcttctt 27244422  T

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Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 33569891 - 33569828
Alignment:
Q  230 agtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    ||||||||| |||| ||||||||| |||||||||||||| |||  ||||||| ||| |||||||    
T  33569891 agtgtgctcttcctcgaggtctcaggttcgattctctctggtgctaatttaagtggactaattt 33569828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 191 - 265
Target Start/End: Original strand, 4683211 - 4683285
Alignment:
Q  191 cacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||||| ||||| ||||||||||||| |||  ||||  ||||| ||||||||| ||| |||||||||| ||||||    
T  4683211 cacttgagttgtcctggtggtattggtttgaaacctgagagtgcgctcctcctcgagatctcaagttcaattctc 4683285  T

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Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 16918651 - 16918573
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctct 268  Q
    ||||||||||||  || |||||||||| ||| || || ||||||||||||||||  |||||| | ||| ||||||||||    
T  16918651 ccacttgggttggcctagtggtattggtttgggatctgggagtgtgctcctcctcaaggtcttaggttggattctctct 16918573  T

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Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 207 - 301
Target Start/End: Complemental strand, 23230661 - 23230567
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||  ||| || || ||||||||||||||||  | ||  || |||| |||||||| |||||||||||  ||| ||||||||||||||||    
T  23230661 gtggtattgatttgggaactgggagtgtgctcctcctcaaagttccaggttcaattctctccagtgtcaatttggatgagctaatttaacttctt 23230567  T

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Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 301
Target Start/End: Complemental strand, 33962860 - 33962746
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatggg 286  Q
    |||||||||||||||  ||  || |||||| ||| || || |||||||||||||||| ||| ||||   ||||||||||  ||||| |||||||  |||     
T  33962860 aatccacttgggttggcctaatgatattggtttgggaactgggagtgtgctcctcctcgagatctcggattcgattctccttagtgccaatttaggtgga 33962761  T
Q  287 ctaatttaacttctt 301  Q
    |||||||| ||||||    
T  33962760 ctaatttatcttctt 33962746  T

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Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 293
Target Start/End: Original strand, 2311719 - 2311830
Alignment:
Q  185 tcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctcctt---gaggtctcaagttcgattctctctagtgtcaatttaa 281  Q
    ||||||||||| |||||   || ||||||||||||| || || ||||||| ||||||||    ||||||||| |||||||| |||   |||||||||| |    
T  2311719 tcaatccacttaggttgacttgttggtattggcttgagatctgggagtgtactcctcctcctcgaggtctcaggttcgattttcttcggtgtcaatttga 2311818  T
Q  282 atgggctaattt 293  Q
     |||||||||||    
T  2311819 gtgggctaattt 2311830  T

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Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 2750659 - 2750610
Alignment:
Q  230 agtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||| ||||  |||||||| |||||||||||||||||| ||||||    
T  2750659 agtgtgctcttcctcaaggtctcatgttcgattctctctagtgccaattt 2750610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 7918171 - 7918236
Alignment:
Q  229 gagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattta 294  Q
    ||||||| |||||||| |||||| |||||| ||  |||||||||||||||||  || |||||||||    
T  7918171 gagtgtgttcctccttaaggtcttaagttcaatcatctctagtgtcaatttaggtgagctaattta 7918236  T

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Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 14500280 - 14500369
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||| |||  || |||||||  ||||| || || ||||||||||||||||  ||||||||  ||||||||||||| ||| ||||||    
T  14500280 ccacttggtttggcctagtggtataagcttgagatctgggagtgtgctcctcctctaggtctcagattcgattctctctggtgccaattt 14500369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 301
Target Start/End: Complemental strand, 21304029 - 21303956
Alignment:
Q  228 ggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||| ||||||||||  |||| ||| |||||||||||||| |||||||||| |  ||| ||||||| ||||||    
T  21304029 ggagtatgctcctcctgaaggtttcaggttcgattctctctggtgtcaatttgagggggttaatttagcttctt 21303956  T

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Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 295
Target Start/End: Original strand, 41202257 - 41202358
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    |||||||| ||||||||||||| | || || || ||||| |||||||||| || |||| | |||| ||| |||||  |||||||||  |||| |||||||    
T  41202257 ttgggttggtctggtggtattgacctgagatctgggagtatgctcctcctcgaagtcttaggttcaattttctctgatgtcaatttggatggactaattt 41202356  T
Q  294 aa 295  Q
    ||    
T  41202357 aa 41202358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 45026782 - 45026835
Alignment:
Q  226 taggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||||||||  |||||||| ||| |||||||||| ||| ||||||    
T  45026782 taggagtgtgctcctcctcaaggtctcatgtttgattctctctggtgccaattt 45026835  T

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Target: scaffold0070 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 38978 - 38880
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgg 285  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||| ||||| || || || ||||| |||||||| ||||  |||||||||| |||||    
T  38978 aatccacttgggttggtctggtggtattggcttgggacctaggagtatgctcatctttaagatctcacgttcgattttctccggtgtcaatttgaatgg 38880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 7797 - 7725
Alignment:
Q  192 acttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattct 264  Q
    |||||||||| |||||||||||||||||| |||||   ||||||||||||||| |||||||||||||||||||    
T  7797 acttgggttggtctggtggtattggcttgagacctgaaagtgtgctcctccttaaggtctcaagttcgattct 7725  T

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Target: scaffold0299 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 204 - 279
Target Start/End: Original strand, 11545 - 11620
Alignment:
Q  204 ctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||||||| || || |||||||||||||||| ||||||||| |||||||||||||| |||| |||||    
T  11545 ctggtggtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgttaattt 11620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 205 - 298
Target Start/End: Complemental strand, 43390 - 43297
Alignment:
Q  205 tggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaactt 298  Q
    |||||||||||||||| ||| | |||||||| |||| ||| |||||||| ||||||||| ||  |||||||||||  |||||||||||||||||    
T  43390 tggtggtattggcttgggacttgggagtgtgttccttcttaaggtctcatgttcgattcccttcagtgtcaatttggatgggctaatttaactt 43297  T

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Target: scaffold0368 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 15005 - 14927
Alignment:
Q  223 acctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||||||||||| |||||||||  || |||||||||  ||| |||||||| |||||||||||| ||||||    
T  15005 acctaggagtgtgctcctcctcgaggtctcatatttgattctctccggtgacaatttaagtgggctaatttagcttctt 14927  T

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Target: scaffold0126 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 207 - 301
Target Start/End: Complemental strand, 25403 - 25309
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    |||||||||||||| ||| | ||||||||||||| ||  |||||||| |||||||| ||||| |||||||||| |||| |||| |||| ||||||    
T  25403 gtggtattggcttgagacttgggagtgtgctccttctcaaggtctcaggttcgattatctctggtgtcaatttgaatgagctattttagcttctt 25309  T

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Target: scaffold0118 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 41706 - 41602
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  || |||||||||||||| || ||  |||| |||||||||| ||||||||| |||| |||||||||  |||||||||   |||||||    
T  41706 ccacttgggttggcctagtggtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttcaattctctctgatgtcaatttgggtgggcta 41607  T
Q  290 attta 294  Q
    |||||    
T  41606 attta 41602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 185 - 301
Target Start/End: Original strand, 112280 - 112396
Alignment:
Q  185 tcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatg 284  Q
    |||| ||||||||||||  ||||| |||||||||||  | || |||||||| ||||| ||||||||| | |||||||||||||  ||| |||||||  ||    
T  112280 tcaacccacttgggttggcctggttgtattggcttggaatctgggagtgtggtcctctttgaggtctgaggttcgattctctccggtgccaatttaggtg 112379  T
Q  285 ggctaatttaacttctt 301  Q
    | |||||||| ||||||    
T  112380 gactaatttagcttctt 112396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 19902 - 19846
Alignment:
Q  208 tggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattct 264  Q
    ||||||||||||| || || ||||| |||||||||||||||||||||||||||||||    
T  19902 tggtattggcttgggatctgggagtctgctcctccttgaggtctcaagttcgattct 19846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 49348 - 49420
Alignment:
Q  229 gagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||| | ||||| ||| |||||||||||||  |||||||||||| |||| ||||||||||||||    
T  49348 gagtgtgctcctcttcgaggtatcaggttcgattctctccggtgtcaatttaagtgggttaatttaacttctt 49420  T

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Target: scaffold1367 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 899 - 832
Alignment:
Q  204 ctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagt 271  Q
    ||||||||||||||||| || || ||| |||||||||||| || |||||| |||||||||||||||||    
T  899 ctggtggtattggcttgggatctgggaatgtgctcctcctcgaagtctcaggttcgattctctctagt 832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 24056 - 24167
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  ||  |||||||| |||| ||| |||||||||||||||| | || || ||| |||||||| |||||  || |||||| | |||||||    
T  24056 ccacttgggttggcctaatggtattgacttgggacttaggagtgtgctcctcttcgaagtgtcaggttcgattatctctgatgccaatttgagtgggcta 24155  T
Q  290 atttaacttctt 301  Q
    ||||||||||||    
T  24156 atttaacttctt 24167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 194 - 301
Target Start/End: Complemental strand, 163078 - 162971
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    |||||||| ||| ||||| ||| |||  |||||  |||||||||||||| | |||||| | |||||||||||||  ||||||||||| |||| |||| ||    
T  163078 ttgggttggtctagtggttttgacttatgacctgagagtgtgctcctccataaggtctgaggttcgattctctccggtgtcaatttagatggactaactt 162979  T
Q  294 aacttctt 301  Q
    ||||||||    
T  162978 aacttctt 162971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 281
Target Start/End: Complemental strand, 95044 - 94953
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaa 281  Q
    ||||||||||||  || ||||||||||||||  |||| ||||||||||||||||  |||||||| |||| ||| ||||| ||| ||||||||    
T  95044 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcaattatctctggtgccaatttaa 94953  T

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Target: scaffold0194 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 205 - 267
Target Start/End: Complemental strand, 13104 - 13042
Alignment:
Q  205 tggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctc 267  Q
    |||||||||||||||| || || ||||||||||||||||  |||||||| |||||||||||||    
T  13104 tggtggtattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 13042  T

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Target: scaffold0115 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 42719 - 42626
Alignment:
Q  208 tggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||||||||| |||||  ||   || |||||||  || |||||||||||||||||| | |||||||||||  |||||||||||||||||||    
T  42719 tggtattggcttgggacctgagaacatgatcctcctcaagatctcaagttcgattctctatggtgtcaatttaggtgggctaatttaacttctt 42626  T

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Target: scaffold0180 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 279
Target Start/End: Complemental strand, 20018 - 19946
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    ||||||||||||||  |||| ||||| ||||||||||  |||||||| |||||||||||||| |||| |||||    
T  20018 gtggtattggcttggaacctgggagtatgctcctcctcaaggtctcaggttcgattctctctggtgttaattt 19946  T

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Target: scaffold0238 (Bit Score: 36; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 226 - 301
Target Start/End: Complemental strand, 2748 - 2673
Alignment:
Q  226 taggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||| ||||||||||  |||||||| |||||||||||||| ||| |||||| ||  |||||||||| ||||||    
T  2748 taggagtctgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgaagaggctaatttagcttctt 2673  T

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Target: scaffold0238; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 5196 - 5307
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||| ||||| || |||  ||||||||| ||| | ||||||||||||||||| | || | | |||||||||||||| ||   ||||||||| || ||    
T  5196 ccacttgagttgtcctagtgtaattggcttgggacttgggagtgtgctcctccttaaagttttaggttcgattctctctggtactaatttaaattggtta 5295  T
Q  290 atttaacttctt 301  Q
    ||||| ||||||    
T  5296 atttagcttctt 5307  T

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Target: scaffold0221 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 265
Target Start/End: Complemental strand, 2982 - 2907
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    ||||||||||||   ||||||| |||| ||| ||||| | |||||| |||||||| ||||||||||||||||||||    
T  2982 ccacttgggttggcttggtggttttggtttgggaccttgaagtgtgatcctccttaaggtctcaagttcgattctc 2907  T

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Target: scaffold0122 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 184 - 301
Target Start/End: Complemental strand, 6998 - 6884
Alignment:
Q  184 atcaatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaat 283  Q
    ||||||| | ||||||||  || |||||||||||||| |||   ||||||||||||||||  | |||||| ||||||   ||||| |||||||||| | |    
T  6998 atcaatctatttgggttggcctagtggtattggcttgggactggggagtgtgctcctcctcaaagtctcaggttcga---tctctggtgtcaatttgagt 6902  T
Q  284 gggctaatttaacttctt 301  Q
    ||||||||||| ||||||    
T  6901 gggctaatttagcttctt 6884  T

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Target: scaffold0955 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0955
Description:

Target: scaffold0955; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 292
Target Start/End: Original strand, 3463 - 3567
Alignment:
Q  187 aatccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatggg 286  Q
    |||||||||||||||  | ||||||||||||||| ||||||| ||| ||||| |  || || ||||| |||||||| ||||  |||||||||| ||||||    
T  3463 aatccacttgggttggccgggtggtattggcttgggacctagaagtatgctcat-tttaagatctcacgttcgattttctccggtgtcaatttgaatggg 3561  T
Q  287 ctaatt 292  Q
    | ||||    
T  3562 cgaatt 3567  T

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Target: scaffold0021 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 294
Target Start/End: Complemental strand, 157056 - 156958
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    ||||||||  ||| ||||||||||||| || || |||||||||||||||| ||||  ||| |||||||| |||   |||||||||| | |||||||||||    
T  157056 ttgggttgacctgttggtattggcttgagatctgggagtgtgctcctcctcgagg--tcaggttcgattttcttcggtgtcaatttgagtgggctaattt 156959  T

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Target: scaffold0021; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 205 - 279
Target Start/End: Original strand, 106066 - 106140
Alignment:
Q  205 tggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaattt 279  Q
    |||||||||| ||||| ||||  |||||||||| || || || |||| ||||||||||||||||  |||||||||    
T  106066 tggtggtattagcttgggaccagggagtgtgctgcttctcgaagtctaaagttcgattctctcttatgtcaattt 106140  T

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Target: scaffold0417 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 10222 - 10326
Alignment:
Q  190 ccacttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggcta 289  Q
    ||||||||||||  ||| || |||||||||| || || |||||| ||  ||||| || |||| ||||| ||||||||| | || |||||||| |||||||    
T  10222 ccacttgggttggcctgatgatattggcttgggatctgggagtgcgcctctcctcgaagtcttaagtttgattctctcaaatgccaatttaagtgggcta 10321  T
Q  290 attta 294  Q
    |||||    
T  10322 attta 10326  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 294
Target Start/End: Original strand, 139873 - 139973
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    |||||||| ||| ||||| |||| ||| ||||| ||| ||||||| | ||  | |||| | |||  ||||||||||||||||||||| ||||||||||||    
T  139873 ttgggttgatctagtggtgttggattgggacctgggaatgtgctctttctcaaagtcttaggtttaattctctctagtgtcaatttagatgggctaattt 139972  T
Q  294 a 294  Q
    |    
T  139973 a 139973  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 294
Target Start/End: Original strand, 320049 - 320149
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaattt 293  Q
    |||||||| | |||| ||||||| ||| |||||| ||||||| || || || ||||||||||||||||| || || ||| ||||||| ||| || |||||    
T  320049 ttgggttggtgtggtagtattggattgggacctaagagtgtgttcttcattaaggtctcaagttcgattatcgctggtgccaatttagatgagccaattt 320148  T
Q  294 a 294  Q
    |    
T  320149 a 320149  T

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Target: scaffold0291 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 2539 - 2468
Alignment:
Q  194 ttgggttgttctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    |||||||| || ||||||||||| ||  || || ||||||||||||||||  |||||||| |||||||||||    
T  2539 ttgggttggtccggtggtattggttttggatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 2468  T

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Target: scaffold0300 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 207 - 301
Target Start/End: Original strand, 4360 - 4454
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctctagtgtcaatttaaatgggctaatttaacttctt 301  Q
    ||||||| |||||| ||  | ||||||||||||| ||| |||| | | ||||||||| |||||||||||||||   ||| |||||||| ||||||    
T  4360 gtggtataggcttgggatttgggagtgtgctccttcttaaggttttaggttcgattccctctagtgtcaatttgggtggactaatttagcttctt 4454  T

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Target: scaffold0198 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 267
Target Start/End: Complemental strand, 10872 - 10812
Alignment:
Q  206 ggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctc 267  Q
    |||| |||||||||| ||| ||||||||||||||||||| |||||||| |||| ||| ||||    
T  10872 ggtgatattggcttg-gacttaggagtgtgctcctccttcaggtctcaggttcaattatctc 10812  T

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Target: scaffold0172 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 15836 - 15775
Alignment:
Q  204 ctggtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctc 265  Q
    ||||||||||||||||| ||  | ||||| ||||||||||  |||||||||||| |||||||    
T  15836 ctggtggtattggcttgggattttggagtatgctcctcctcaaggtctcaagtttgattctc 15775  T

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Target: scaffold0063 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 35445 - 35384
Alignment:
Q  207 gtggtattggcttgcgacctaggagtgtgctcctccttgaggtctcaagttcgattctctct 268  Q
    ||||||||||||||  | |||||||| ||||||||||  |||||| |||||||||| |||||    
T  35445 gtggtattggcttggaatctaggagtatgctcctcctcaaggtcttaagttcgattatctct 35384  T

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