View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14253_low_2 (Length: 478)

Name: NF14253_low_2
Description: NF14253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14253_low_2
NF14253_low_2
[»] chr4 (57 HSPs)
chr4 (1-478)||(29320971-29321452)
chr4 (206-323)||(52298116-52298233)
chr4 (125-337)||(8439431-8439643)
chr4 (117-278)||(55866111-55866271)
chr4 (126-218)||(10203630-10203723)
chr4 (107-218)||(32063662-32063774)
chr4 (114-264)||(41582444-41582595)
chr4 (126-199)||(39667119-39667193)
chr4 (117-268)||(29320029-29320183)
chr4 (112-218)||(30641515-30641620)
chr4 (117-218)||(32062589-32062691)
chr4 (116-218)||(11446269-11446372)
chr4 (116-218)||(40316989-40317092)
chr4 (116-218)||(40327063-40327166)
chr4 (116-264)||(30642426-30642575)
chr4 (115-199)||(39539263-39539348)
chr4 (116-264)||(40388386-40388535)
chr4 (116-275)||(14801735-14801895)
chr4 (143-218)||(8438307-8438382)
chr4 (117-258)||(7280209-7280351)
chr4 (116-257)||(40387466-40387608)
chr4 (126-199)||(50504168-50504242)
chr4 (126-199)||(54858903-54858977)
chr4 (116-199)||(11448074-11448158)
chr4 (112-275)||(16605597-16605761)
chr4 (115-197)||(7451832-7451915)
chr4 (380-427)||(8439366-8439413)
chr4 (112-190)||(43155850-43155929)
chr4 (114-264)||(50418665-50418816)
chr4 (126-199)||(3032591-3032665)
chr4 (126-199)||(5818118-5818192)
chr4 (126-199)||(11523958-11524032)
chr4 (113-218)||(41583557-41583663)
chr4 (126-199)||(45463082-45463156)
chr4 (127-199)||(10408232-10408305)
chr4 (123-275)||(54086964-54087117)
chr4 (123-275)||(15507942-15508094)
chr4 (169-281)||(56014778-56014890)
chr4 (115-261)||(24349672-24349819)
chr4 (114-256)||(55867402-55867545)
chr4 (126-199)||(27068919-27068993)
chr4 (126-199)||(27069253-27069327)
chr4 (126-199)||(54858569-54858643)
chr4 (116-196)||(24711110-24711191)
chr4 (115-275)||(35508509-35508670)
chr4 (239-275)||(7452072-7452108)
chr4 (239-275)||(9144889-9144925)
chr4 (239-275)||(16006076-16006112)
chr4 (239-275)||(17356048-17356084)
chr4 (239-275)||(33247396-33247432)
chr4 (239-275)||(34837197-34837233)
chr4 (239-275)||(35028267-35028303)
chr4 (115-197)||(36009160-36009244)
chr4 (239-275)||(42738154-42738190)
chr4 (239-275)||(44967192-44967228)
chr4 (239-275)||(46661183-46661219)
chr4 (112-168)||(52909630-52909686)
[»] chr5 (39 HSPs)
chr5 (116-478)||(40149880-40150243)
chr5 (116-268)||(40148897-40149050)
chr5 (116-218)||(24141451-24141554)
chr5 (115-264)||(5993887-5994037)
chr5 (117-257)||(30096829-30096970)
chr5 (123-264)||(35512154-35512296)
chr5 (115-262)||(20840531-20840679)
chr5 (126-256)||(8875458-8875589)
chr5 (113-199)||(17544391-17544478)
chr5 (114-264)||(20814415-20814566)
chr5 (126-199)||(33871348-33871422)
chr5 (114-275)||(39453297-39453459)
chr5 (114-275)||(42067790-42067955)
chr5 (117-197)||(3529189-3529270)
chr5 (126-190)||(8875619-8875684)
chr5 (123-275)||(13362497-13362650)
chr5 (114-275)||(14194692-14194853)
chr5 (116-264)||(16157135-16157284)
chr5 (123-275)||(19892577-19892730)
chr5 (115-199)||(38475344-38475429)
chr5 (116-275)||(32242511-32242670)
chr5 (123-264)||(5024298-5024440)
chr5 (116-197)||(11761748-11761830)
chr5 (126-199)||(20152790-20152864)
chr5 (117-218)||(28771164-28771266)
chr5 (151-256)||(42063288-42063394)
chr5 (123-275)||(19892314-19892467)
chr5 (117-197)||(27587148-27587229)
chr5 (116-169)||(39453675-39453728)
chr5 (239-275)||(1506205-1506241)
chr5 (239-275)||(5024142-5024178)
chr5 (239-275)||(6301812-6301848)
chr5 (239-275)||(6757988-6758024)
chr5 (116-275)||(11047437-11047596)
chr5 (117-275)||(14848975-14849135)
chr5 (116-199)||(24547470-24547554)
chr5 (239-275)||(28770992-28771028)
chr5 (239-275)||(31482525-31482561)
chr5 (239-275)||(38475156-38475192)
[»] chr8 (37 HSPs)
chr8 (131-478)||(9337040-9337388)
chr8 (296-400)||(19381898-19382002)
chr8 (117-218)||(2535876-2535978)
chr8 (172-337)||(8747471-8747636)
chr8 (116-199)||(10749853-10749937)
chr8 (116-199)||(4995002-4995085)
chr8 (117-275)||(16388795-16388954)
chr8 (112-199)||(7983423-7983511)
chr8 (118-193)||(11763027-11763103)
chr8 (126-199)||(25124906-25124980)
chr8 (115-199)||(23698589-23698674)
chr8 (117-264)||(4405940-4406088)
chr8 (116-263)||(13186059-13186207)
chr8 (129-196)||(27500424-27500492)
chr8 (117-264)||(39071676-39071824)
chr8 (380-427)||(8747406-8747453)
chr8 (126-256)||(10445621-10445752)
chr8 (125-199)||(44664516-44664591)
chr8 (125-218)||(8746332-8746426)
chr8 (126-275)||(11674932-11675082)
chr8 (126-199)||(35634442-35634516)
chr8 (115-199)||(23663859-23663944)
chr8 (116-199)||(8316933-8317017)
chr8 (126-199)||(234083-234157)
chr8 (126-199)||(710494-710568)
chr8 (126-199)||(747706-747780)
chr8 (126-199)||(871601-871675)
chr8 (237-275)||(13186328-13186366)
chr8 (118-275)||(31873168-31873326)
chr8 (126-199)||(44664851-44664925)
chr8 (136-197)||(1425369-1425430)
chr8 (115-275)||(23663543-23663704)
chr8 (239-275)||(3041579-3041615)
chr8 (239-275)||(36928745-36928781)
chr8 (239-275)||(38845422-38845458)
chr8 (239-275)||(40775773-40775809)
chr8 (239-275)||(44406980-44407016)
[»] chr7 (51 HSPs)
chr7 (121-427)||(22827927-22828242)
chr7 (115-277)||(5457174-5457337)
chr7 (116-218)||(32687396-32687499)
chr7 (112-275)||(28469277-28469441)
chr7 (115-197)||(10092215-10092298)
chr7 (112-218)||(32688544-32688651)
chr7 (117-218)||(18855980-18856082)
chr7 (117-256)||(18087626-18087766)
chr7 (268-335)||(22245530-22245597)
chr7 (113-256)||(17886778-17886922)
chr7 (116-199)||(19204488-19204572)
chr7 (430-478)||(38477203-38477251)
chr7 (125-275)||(2640447-2640598)
chr7 (117-278)||(43123175-43123337)
chr7 (126-199)||(22081569-22081642)
chr7 (117-275)||(10935794-10935953)
chr7 (115-199)||(6764175-6764263)
chr7 (206-272)||(20567272-20567337)
chr7 (126-199)||(42618254-42618328)
chr7 (126-199)||(43266275-43266349)
chr7 (126-199)||(43266609-43266683)
chr7 (126-199)||(46205652-46205726)
chr7 (115-199)||(13050126-13050211)
chr7 (115-199)||(18086287-18086372)
chr7 (116-199)||(6571012-6571096)
chr7 (117-264)||(42731419-42731567)
chr7 (116-218)||(13384501-13384604)
chr7 (107-277)||(18670130-18670301)
chr7 (117-199)||(42362450-42362533)
chr7 (116-197)||(17102019-17102101)
chr7 (126-199)||(25453471-25453545)
chr7 (126-199)||(32068105-32068179)
chr7 (126-275)||(32680604-32680754)
chr7 (126-190)||(10600035-10600100)
chr7 (113-245)||(20425474-20425607)
chr7 (126-198)||(23058773-23058846)
chr7 (115-255)||(45010893-45011034)
chr7 (118-197)||(6253472-6253552)
chr7 (237-281)||(17885749-17885793)
chr7 (115-182)||(18855408-18855476)
chr7 (239-275)||(19204727-19204763)
chr7 (239-275)||(22871431-22871467)
chr7 (116-199)||(22871622-22871706)
chr7 (117-169)||(23608808-23608860)
chr7 (115-182)||(27396957-27397025)
chr7 (239-275)||(27991977-27992013)
chr7 (115-179)||(29144348-29144412)
chr7 (239-275)||(30948283-30948319)
chr7 (239-275)||(34928773-34928809)
chr7 (239-275)||(39686657-39686693)
chr7 (167-199)||(48789148-48789180)
[»] chr3 (44 HSPs)
chr3 (125-268)||(33154885-33155029)
chr3 (115-235)||(26718756-26718872)
chr3 (114-218)||(21186021-21186126)
chr3 (115-218)||(1078535-1078638)
chr3 (115-218)||(1079547-1079651)
chr3 (115-218)||(47856385-47856489)
chr3 (126-275)||(33156263-33156413)
chr3 (117-218)||(47857571-47857673)
chr3 (114-218)||(6956245-6956350)
chr3 (120-218)||(32431518-32431617)
chr3 (116-273)||(25107212-25107370)
chr3 (123-278)||(21783406-21783560)
chr3 (118-218)||(23276309-23276410)
chr3 (119-191)||(43607782-43607855)
chr3 (114-199)||(2796176-2796262)
chr3 (115-264)||(23458259-23458409)
chr3 (126-199)||(29118536-29118610)
chr3 (120-256)||(9368589-9368726)
chr3 (115-275)||(33689648-33689809)
chr3 (128-199)||(43998156-43998228)
chr3 (117-275)||(9294227-9294386)
chr3 (118-275)||(25108364-25108522)
chr3 (116-262)||(33689381-33689527)
chr3 (126-275)||(36314307-36314457)
chr3 (116-261)||(54317914-54318059)
chr3 (131-218)||(43608808-43608896)
chr3 (129-199)||(3469543-3469614)
chr3 (116-218)||(19741218-19741321)
chr3 (126-196)||(29118884-29118955)
chr3 (126-275)||(23457988-23458138)
chr3 (126-199)||(32306767-32306841)
chr3 (126-191)||(33506187-33506253)
chr3 (126-199)||(37778616-37778690)
chr3 (126-195)||(40788767-40788837)
chr3 (114-195)||(41988581-41988663)
chr3 (126-199)||(47551502-47551576)
chr3 (115-168)||(40758487-40758540)
chr3 (239-275)||(8041854-8041890)
chr3 (113-264)||(9367737-9367889)
chr3 (112-191)||(36418041-36418121)
chr3 (239-275)||(48322500-48322536)
chr3 (118-197)||(51994233-51994313)
chr3 (239-275)||(54466661-54466697)
chr3 (239-275)||(55052402-55052438)
[»] chr2 (34 HSPs)
chr2 (116-218)||(6589685-6589788)
chr2 (116-218)||(28230065-28230168)
chr2 (115-263)||(28228668-28228817)
chr2 (118-261)||(3653363-3653506)
chr2 (126-199)||(41587244-41587317)
chr2 (116-256)||(43741964-43742105)
chr2 (120-218)||(202682-202781)
chr2 (117-275)||(39423515-39423674)
chr2 (114-218)||(39936573-39936677)
chr2 (124-264)||(15848095-15848236)
chr2 (112-218)||(39935451-39935557)
chr2 (126-199)||(15604348-15604422)
chr2 (126-199)||(28226087-28226161)
chr2 (136-197)||(39498329-39498391)
chr2 (114-218)||(25231174-25231279)
chr2 (116-169)||(34447812-34447865)
chr2 (111-275)||(37895341-37895506)
chr2 (118-257)||(3652212-3652352)
chr2 (117-275)||(10712992-10713151)
chr2 (126-199)||(8710811-8710885)
chr2 (115-196)||(11163371-11163453)
chr2 (126-195)||(41588405-41588475)
chr2 (115-275)||(36382159-36382320)
chr2 (116-169)||(36382503-36382556)
chr2 (123-168)||(44713801-44713846)
chr2 (239-275)||(1695863-1695899)
chr2 (239-275)||(6658116-6658152)
chr2 (239-275)||(11163177-11163213)
chr2 (239-275)||(13995796-13995832)
chr2 (239-275)||(15848357-15848393)
chr2 (239-275)||(16099293-16099329)
chr2 (206-274)||(25893488-25893556)
chr2 (239-275)||(33062173-33062209)
chr2 (239-275)||(34448064-34448100)
[»] chr1 (52 HSPs)
chr1 (114-268)||(44522144-44522299)
chr1 (117-264)||(6367562-6367710)
chr1 (112-194)||(5734005-5734087)
chr1 (126-195)||(35038464-35038534)
chr1 (116-264)||(17662130-17662279)
chr1 (117-277)||(34850332-34850493)
chr1 (113-199)||(19515815-19515902)
chr1 (116-218)||(32132303-32132406)
chr1 (117-275)||(34464449-34464608)
chr1 (115-264)||(34464729-34464879)
chr1 (126-199)||(40714453-40714527)
chr1 (115-199)||(23209672-23209757)
chr1 (126-199)||(28325147-28325220)
chr1 (116-275)||(6367831-6367991)
chr1 (118-264)||(13914347-13914494)
chr1 (126-199)||(17188963-17189037)
chr1 (116-197)||(25647883-25647965)
chr1 (126-199)||(30326505-30326579)
chr1 (117-258)||(31197065-31197202)
chr1 (117-218)||(34849011-34849113)
chr1 (126-199)||(49955690-49955764)
chr1 (126-218)||(8898526-8898619)
chr1 (123-275)||(46163036-46163189)
chr1 (113-197)||(47999439-47999524)
chr1 (116-275)||(37578461-37578621)
chr1 (116-191)||(17661851-17661926)
chr1 (116-194)||(17691218-17691297)
chr1 (126-196)||(40714789-40714860)
chr1 (126-199)||(8898860-8898934)
chr1 (126-199)||(17189194-17189268)
chr1 (126-199)||(20760848-20760922)
chr1 (126-275)||(24905176-24905326)
chr1 (126-199)||(35040957-35041031)
chr1 (126-199)||(49955356-49955430)
chr1 (240-277)||(27998098-27998135)
chr1 (115-218)||(32133249-32133354)
chr1 (115-191)||(35473629-35473706)
chr1 (115-199)||(41098731-41098816)
chr1 (239-275)||(183344-183380)
chr1 (239-275)||(4716591-4716627)
chr1 (239-275)||(4960663-4960699)
chr1 (239-275)||(19017752-19017788)
chr1 (116-199)||(26024422-26024506)
chr1 (239-275)||(31514441-31514477)
chr1 (239-275)||(33442717-33442753)
chr1 (112-168)||(36694277-36694333)
chr1 (112-168)||(36710378-36710434)
chr1 (123-226)||(40439507-40439611)
chr1 (239-275)||(44523405-44523441)
chr1 (116-168)||(46899977-46900029)
chr1 (239-275)||(49722995-49723031)
chr1 (239-275)||(52134306-52134342)
[»] chr6 (33 HSPs)
chr6 (114-271)||(28498298-28498456)
chr6 (117-258)||(15116518-15116660)
chr6 (114-271)||(29810709-29810867)
chr6 (115-258)||(26463177-26463321)
chr6 (117-278)||(12407508-12407670)
chr6 (129-218)||(24210543-24210633)
chr6 (123-275)||(33517540-33517693)
chr6 (119-258)||(13378527-13378667)
chr6 (116-275)||(21627982-21628142)
chr6 (116-182)||(139807-139872)
chr6 (116-182)||(147828-147893)
chr6 (126-199)||(7905252-7905326)
chr6 (117-262)||(26464481-26464627)
chr6 (126-197)||(15913893-15913965)
chr6 (144-196)||(3176376-3176429)
chr6 (115-255)||(8090216-8090357)
chr6 (126-199)||(21836041-21836114)
chr6 (115-199)||(30337447-30337532)
chr6 (123-218)||(141066-141162)
chr6 (123-218)||(149087-149183)
chr6 (116-275)||(33517803-33517963)
chr6 (112-262)||(30726041-30726192)
chr6 (126-195)||(7160813-7160883)
chr6 (126-199)||(7905586-7905660)
chr6 (117-218)||(15115339-15115441)
chr6 (126-199)||(22502783-22502857)
chr6 (126-199)||(22503117-22503191)
chr6 (126-187)||(31406887-31406949)
chr6 (206-275)||(33647053-33647122)
chr6 (116-199)||(8089442-8089526)
chr6 (239-275)||(17734319-17734355)
chr6 (239-275)||(28000508-28000544)
chr6 (239-275)||(30804130-30804166)
[»] scaffold0008 (1 HSPs)
scaffold0008 (117-277)||(239818-239979)
[»] scaffold0220 (2 HSPs)
scaffold0220 (115-274)||(23229-23389)
scaffold0220 (116-273)||(24617-24775)
[»] scaffold0031 (1 HSPs)
scaffold0031 (117-264)||(68965-69113)
[»] scaffold0388 (1 HSPs)
scaffold0388 (126-256)||(12525-12656)
[»] scaffold0775 (1 HSPs)
scaffold0775 (123-256)||(6266-6400)
[»] scaffold0005 (1 HSPs)
scaffold0005 (116-275)||(37832-37992)
[»] scaffold0328 (1 HSPs)
scaffold0328 (126-256)||(11426-11557)
[»] scaffold0182 (1 HSPs)
scaffold0182 (206-272)||(31714-31780)
[»] scaffold0006 (1 HSPs)
scaffold0006 (126-199)||(221800-221873)
[»] scaffold0128 (1 HSPs)
scaffold0128 (123-196)||(19863-19937)
[»] scaffold0559 (1 HSPs)
scaffold0559 (239-275)||(1471-1507)
[»] scaffold0075 (1 HSPs)
scaffold0075 (239-275)||(14552-14588)


Alignment Details
Target: chr4 (Bit Score: 400; Significance: 0; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 1 - 478
Target Start/End: Complemental strand, 29321452 - 29320971
Alignment:
Q  1 cacaaaaatatttaccctctgtatcttgagcttatgattacgaacaaaaatatcctcttcgagttgatgtcgcttgtggtgcacactttcctgtc---aa 97  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   ||    
T  29321452 cacaaaaatatttactctctgtatctggagcttatgattacgaacaaaaatatcctctccgagttgatgtcgcttgtggtgcacactttcctgtcctaaa 29321353  T
Q  98 aaatgacataaatgaaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacc 196  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||  || |||||||||||||||||||||||||    
T  29321352 aaatgacataaatgaaataggctttaatatgtgtttcgtccttgcaattaagggtcatttaaaaattggtttctataatcgttaattctggcaaattacc 29321253  T
Q  197 cttttaaattttaatcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtgctatcacatcaaaacttt 296  Q
     ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  29321252 ttttcaaattttaatcatttaagaattggttcctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtgctatcacatcaaaatttt 29321153  T
Q  297 acgtgaacggaccaaaatgcccctaaggttctcagacatacgtgtaatgaccgttttacccctaagttcatcttctccatcttcatcttcaaaacccagc 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  29321152 acgtgaacggaccaaaatgcccctaaggttctcagacatacgtgtaatgaccgttttaccccttagttcatcttcttcatcttcatcttcaaaacccagc 29321053  T
Q  397 acaacaaccactaccatctcctccatcctcaaaaccagcagcatctttttcagtgtgttcaaaggcaccatcaaaattgttt 478  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29321052 acaacagccactaccatctcctccatcctcaacaccagcagcatctttttcagtgtgttcaaaggcaccatcaaaattgttt 29320971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 206 - 323
Target Start/End: Original strand, 52298116 - 52298233
Alignment:
Q  206 tttaatcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtgctatcacatcaaaactttacgtgaacg 305  Q
    ||||||||||||| | || || ||||  || | ||||||||||||||||||||| | |||||||||||||||||   |||||||||| ||||||||||||    
T  52298116 tttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtcactattctgcttacgtggcagtgcagacacatcaaaagtttacgtgaacg 52298215  T
Q  306 gaccaaaatgcccctaag 323  Q
    ||||||||||||||||||    
T  52298216 gaccaaaatgcccctaag 52298233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 125 - 337
Target Start/End: Complemental strand, 8439643 - 8439431
Alignment:
Q  125 tatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaatt 223  Q
    ||||||||||||||| ||||||||||||  | ||||||||| || | |||||||||||| || |||||||| ||||  |||  |||||||||||| | ||    
T  8439643 tatgtgtttcgtcct-gtaattaagggttgtttaaaaattgatcattgtaatcgttaatcctagcaaattatccttgcaaacattaatcatttaaaattt 8439545  T
Q  224 ggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtgctatcacatcaaaactttacgtgaacggaccaaaatgcccctaag 323  Q
     ||  ||  ||| | |||||||| ||||||||| ||||||| | ||||| ||||| |  | |||||||| ||||||||||| |||| |||||||||||||    
T  8439544 cgtcccttgacccacttaatcaccgccacgtcagtaatttgatgacgtgacagtgttgacccatcaaaagtttacgtgaacagaccgaaatgcccctaag 8439445  T
Q  324 gttctcagacatac 337  Q
    ||||| | ||||||    
T  8439444 gttctaacacatac 8439431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 117 - 278
Target Start/End: Original strand, 55866111 - 55866271
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattacccttttaaattttaatcattt 216  Q
    ||||| ||||||| |||||||| || ||||| ||||| | |||||||||||  |||| ||  |||| || |||||||||||| | ||| | |||||||||    
T  55866111 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtt-tgtattcactaatccttgcaaattaccctctcaaagtataatcattt 55866209  T
Q  217 aagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtg 278  Q
    || |||||||  || |||| ||||||| |||||||||||||| |||||||||||||||||||    
T  55866210 aaaaattggtccctgaacccagttaataactgccacgtcactgatttgcttacgtggcagtg 55866271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 10203630 - 10203723
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 218  Q
    ||||||||||||| | |||||||||||||| |||||||| ||| |||||||||||||||||| ||||||| |||| |||| |||||||||||||    
T  10203630 atgtgtttcgtccctataattaagggtcatttaaaaattagtcactgtaatcgttaattctgacaaattatccttataaaatttaatcatttaa 10203723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 107 - 218
Target Start/End: Complemental strand, 32063774 - 32063662
Alignment:
Q  107 aaatgaaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaat 205  Q
    ||||| || |||||||||||||| ||| |||| || ||||| ||||||| |||||||||||  |||||||||||||| ||||||||||||||||  |||     
T  32063774 aaatggaaaaggctttaatatgtattttgtccctgcaattaggggtcatttaaaaattggtttctgtaatcgttaatactggcaaattacccttgcaaag 32063675  T
Q  206 tttaatcatttaa 218  Q
    |||||||||||||    
T  32063674 tttaatcatttaa 32063662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 114 - 264
Target Start/End: Original strand, 41582444 - 41582595
Alignment:
Q  114 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatc 212  Q
    ||||||||||||||||||||| ||| || ||| | ||||||| ||||||||||| ||| ||||||||||| |||||||||| ||| |  |||  ||||||    
T  41582444 ataggctttaatatgtgtttcatccctgcaatcaggggtcatttaaaaattggtccctctaatcgttaatcctggcaaattgcccctgcaaaagttaatc 41582543  T
Q  213 atttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 264  Q
    |||||| | || ||  |||| |  ||||||||| ||||||||||||||||||    
T  41582544 atttaaaatttcgtccctcatcacagttaatcattgccacgtcactaatttg 41582595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 39667193 - 39667119
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||| |||| |||||||||||    
T  39667193 atgtgtttcgtccttgtaattacgggtcatttaaaaattggtccctgtaatcgttaatcctggtaaattaccctt 39667119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 117 - 268
Target Start/End: Original strand, 29320029 - 29320183
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||||||||| ||||| |||| || ||||   ||| || ||||||||||||| ||||||| ||||| ||  ||||||||||||| ||| ||||||||||    
T  29320029 ggctttaatatatgtttggtccctgcaatttgaggttatttaaaaattggtccctgtaatccttaatcctaacaaattaccctttcaaagtttaatcatt 29320128  T
Q  216 taagaattggt--ttctcaacctagttaatcactgccacgtcactaatttgctta 268  Q
    | |||||||||   |||||||| ||||||||| || ||||||||| ||| |||||    
T  29320129 ttagaattggtccctctcaacccagttaatcagtgtcacgtcactgattagctta 29320183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 30641515 - 30641620
Alignment:
Q  112 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattacccttttaaattttaat 211  Q
    |||| |||||||||||||||||||||| |  ||||| ||||||| |||||||| || |||||||||||||| || |||||||||| ||  ||| ||||||    
T  30641515 aaattggctttaatatgtgtttcgtccctccaattaggggtcatttaaaaatttgt-ctgtaatcgttaatccttgcaaattaccattacaaagtttaat 30641613  T
Q  212 catttaa 218  Q
    |||||||    
T  30641614 catttaa 30641620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 117 - 218
Target Start/End: Original strand, 32062589 - 32062691
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||||||||||||||| |||| || ||||| ||||||| ||||||||||||| ||||| | ||||| ||| ||||||| |||| |||| ||||||||||    
T  32062589 ggctttaatatgtgtttggtccctgaaattaggggtcatttaaaaattggtccttgtaaacattaatcctgacaaattagccttgtaaaatttaatcatt 32062688  T
Q  216 taa 218  Q
    |||    
T  32062689 taa 32062691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 11446269 - 11446372
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattgg-tcctgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    |||| |||||||||||||||||| || |||||  |||||| |||||||||| || || |||||||||| ||||||||||||||||  ||| ||||||| |    
T  11446269 aggcattaatatgtgtttcgtccctgcaattagaggtcatttaaaaattggttcatggaatcgttaatcctggcaaattacccttgcaaagtttaatctt 11446368  T
Q  215 ttaa 218  Q
    ||||    
T  11446369 ttaa 11446372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 40317092 - 40316989
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    ||||||||||||||||||||||| || | ||| || | || |||||||||| | |||||||||||||| |||| |||||||||||| ||| ||||||| |    
T  40317092 aggctttaatatgtgtttcgtccctgcagttagggcttatttaaaaattggcctctgtaatcgttaatcctggaaaattaccctttcaaagtttaatcct 40316993  T
Q  215 ttaa 218  Q
    ||||    
T  40316992 ttaa 40316989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 40327166 - 40327063
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    ||||||||||||||||||||||| || | ||| || | || |||||||||| | |||||||||||||| |||| |||||||||||| ||| ||||||| |    
T  40327166 aggctttaatatgtgtttcgtccctgcagttagggcttatttaaaaattggcctctgtaatcgttaatcctggaaaattaccctttcaaagtttaatcct 40327067  T
Q  215 ttaa 218  Q
    ||||    
T  40327066 ttaa 40327063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 264
Target Start/End: Complemental strand, 30642575 - 30642426
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    ||||||||||||||||||||||| || ||||| ||||||| ||||||||  ||  ||||||||||||| || ||||||||  |||  ||| |||||||||    
T  30642575 aggctttaatatgtgtttcgtccctgcaattatgggtcatttaaaaattcatcattgtaatcgttaatcctagcaaattagtcttgcaaagtttaatcat 30642476  T
Q  215 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 264  Q
    |||| | || ||  ||  ||| | ||||| |||||||||||| |||||||    
T  30642475 ttaaaatttcgtcccttgacccacttaatgactgccacgtcattaatttg 30642426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 199
Target Start/End: Complemental strand, 39539348 - 39539263
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 199  Q
    ||||||| ||||||| |||| |||||| ||||||||||| | ||||||||||||  |||||||||||||||| |||||||| ||||    
T  39539348 taggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtcaatgtaatcgttaattcttgcaaattagcctt 39539263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 264
Target Start/End: Complemental strand, 40388535 - 40388386
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    ||||||||||||||||||| ||| || ||||||||| ||| ||||||||||| ||| |||||| |||| |||||||||| |||    |||  ||||||||    
T  40388535 aggctttaatatgtgtttcatccctgcaattaagggccatttaaaaattggtccctctaatcgctaatcctggcaaattgccccaacaaaagttaatcat 40388436  T
Q  215 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 264  Q
    |||| | || ||  || | |  ||||||||| ||||||||||||||||||    
T  40388435 ttaaaatttcgtccctgatcacagttaatcattgccacgtcactaatttg 40388386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 116 - 275
Target Start/End: Original strand, 14801735 - 14801895
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    |||||| ||||||| |||| |||||| ||||| | ||| | |||||||||||| | ||||||| |||| ||| ||| |||||||| ||   |||||||||    
T  14801735 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatcat 14801834  T
Q  215 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||| | || ||  |||  || | |||||||||||||||||||||||||| | ||||||||    
T  14801835 ttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtggca 14801895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 8438307 - 8438382
Alignment:
Q  143 aattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 218  Q
    ||||| ||||||| |||||||||||| ||||||||||||| |||||||||||| |||  |||  ||||||||||||    
T  8438307 aattaggggtcatttaaaaattggtcatgtaatcgttaatcctggcaaattactcttgcaaaccttaatcatttaa 8438382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 117 - 258
Target Start/End: Original strand, 7280209 - 7280351
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    |||||| |||| ||||| |||||||||| || ||||||| |||||| ||||| ||||| || ||||| ||| ||  || |||| | ||| |||||||| |    
T  7280209 ggcttttatatatgtttagtccttgtaaataggggtcatttaaaaaatggtctctgtattctttaatcctgtcattttgccctgtcaaaatttaatcact 7280308  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcact 258  Q
    ||| ||||||||||||| || ||||||| | || |||||||||    
T  7280309 taaaaattggtttctcagccaagttaataaatgtcacgtcact 7280351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 116 - 257
Target Start/End: Original strand, 40387466 - 40387608
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    ||||||||||||||||||| ||| || ||||| ||| ||| ||||||||||| |||||| ||| |||| |||||||||| ||| |  |||  ||||||||    
T  40387466 aggctttaatatgtgtttcatccctgcaattaggggccatttaaaaattggtccctgtattcgctaatcctggcaaattgcccctgcaaaagttaatcat 40387565  T
Q  215 ttaagaattggtttctcaacctagttaatcactgccacgtcac 257  Q
    |||| | || ||| |||  |  | |||||||||||||||||||    
T  40387566 ttaaaatttcgttcctcttctcacttaatcactgccacgtcac 40387608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 50504242 - 50504168
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||||||||| | ||||| |||||||| ||| |||||||||||||| | ||||| ||||||||    
T  50504242 atgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcgttaatccaggcaatttaccctt 50504168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 54858977 - 54858903
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||| ||||||||||||| ||||||| ||||||||    
T  54858977 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttaccctt 54858903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 11448158 - 11448074
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||| ||||||| |||||||| |||||||| ||||| | ||||||||| || ||||||||| |||| || |||||||||||||    
T  11448158 aggcttaaatatgtatttcgtccctgtaattaggggtcgtttaaaaattgatctctgtaatcgctaatccttgcaaattaccctt 11448074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 275
Target Start/End: Original strand, 16605597 - 16605761
Alignment:
Q  112 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaa 210  Q
    |||||||||| |  |||||||||||||||| ||||| | ||||| |||||||| || ||||||||||| ||  ||| ||| ||||||||  |    ||||    
T  16605597 aaataggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgtcaaacctgccaatttacccttgcattgattaa 16605696  T
Q  211 tcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||| | || ||  |||  || | |||||||||||||||||||||||| ||| ||||||||    
T  16605697 tcatttaaaatttcgtccctccccccacttaatcactgccacgtcactaattagctgacgtggca 16605761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 7451832 - 7451915
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccc 197  Q
    ||||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| ||||||||||||||| ||||||| ||||||    
T  7451832 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttaccc 7451915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 380 - 427
Target Start/End: Complemental strand, 8439413 - 8439366
Alignment:
Q  380 catcttcaaaacccagcacaacaaccactaccatctcctccatcctca 427  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||||||    
T  8439413 catcttcaaaacccagcaccacaaccaccaccatctccttcatcctca 8439366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 43155929 - 43155850
Alignment:
Q  112 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaa 190  Q
    |||||||||| ||||||| |||  ||||| |||||| ||||| | ||||||||||| ||||||||||||||| |||||||    
T  43155929 aaataggcttaaatatgtatttgatccttataattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaa 43155850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 114 - 264
Target Start/End: Original strand, 50418665 - 50418816
Alignment:
Q  114 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatc 212  Q
    |||||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| ||||||||||||||| || ||||| || ||||  ||   ||||||    
T  50418665 ataggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatccttgcaaactagccttgcaatcattaatc 50418764  T
Q  213 atttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 264  Q
    |||||| | || ||   |  ||| | ||||||||||||||||||||||||||    
T  50418765 atttaaaatttcgtcctttgaccaatttaatcactgccacgtcactaatttg 50418816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 3032591 - 3032665
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||| |||||||| |||| ||||||| ||||||||    
T  3032591 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttaccctt 3032665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 5818192 - 5818118
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||| ||||||||| | ||||| |||||||| || ||||||||||||||| ||| ||| ||||||||    
T  5818192 atgtgtttcgtctttgtaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctgtcaatttaccctt 5818118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 11523958 - 11524032
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| ||| |||||||||||||| |||||||  |||||||    
T  11523958 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgttaatcctggcaatataccctt 11524032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 218
Target Start/End: Complemental strand, 41583663 - 41583557
Alignment:
Q  113 aataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattg-gtcctgtaatcgttaattctggcaaattacccttttaaattttaat 211  Q
    |||||||||||||||||||||| ||| || ||||| ||||||| |||||||||  | ||||| ||| |||| |||||||||| ||| |  |||  |||||    
T  41583663 aataggctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattgatttctgtattcgctaatcctggcaaattgcccctgcaaaagttaat 41583564  T
Q  212 catttaa 218  Q
    |||||||    
T  41583563 catttaa 41583557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 45463082 - 45463156
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| ||| ||||||||| |||| ||||||| ||||||||    
T  45463082 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttaccctt 45463156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 10408305 - 10408232
Alignment:
Q  127 tgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    ||||||||||||||| ||||| | ||||| |||||||| || |||||||||| |||| ||||||| ||||||||    
T  10408305 tgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccctt 10408232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 275
Target Start/End: Complemental strand, 54087117 - 54086964
Alignment:
Q  123 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 221  Q
    ||||||| |||| || ||||||||| ||||| | ||||||||||| |||||||||||||||  || ||| ||||||||  |   ||||||||||||| |     
T  54087117 aatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcatgacaatttacccttgcattgtttaatcatttaaaat 54087018  T
Q  222 ttggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    || || ||||  || | |||||||||  || |||||||||||| | ||||||||    
T  54087017 ttcgtctctctccccacttaatcactaacatgtcactaatttgatgacgtggca 54086964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 275
Target Start/End: Complemental strand, 15508094 - 15507942
Alignment:
Q  123 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaat 222  Q
    ||||||| |||| |||||| ||||| ||||| | |||||||||  | |||||||| |||| ||| ||| ||||| ||  |   ||||||||||||| | |    
T  15508094 aatatgtatttcatccttgcaattaggggtcgtttaaaaattgtccttgtaatcgctaatcctgacaatttaccattgcatggtttaatcatttaaaatt 15507995  T
Q  223 tggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    | || ||||  || | |||||||||||| ||||||||||||| | ||||||||    
T  15507994 tcgtctctctccccacttaatcactgccgcgtcactaatttgatgacgtggca 15507942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 281
Target Start/End: Original strand, 56014778 - 56014890
Alignment:
Q  169 ctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgctta 268  Q
    ||||||||| |||| |||||||||| ||| |  |||  |||||||||||| | || ||  |||| |  |||||||||||||||||||||| ||||| | |    
T  56014778 ctgtaatcgctaatcctggcaaattgcccctgcaaacgttaatcatttaaaatttcgtccctcatcacagttaatcactgccacgtcactgatttgatga 56014877  T
Q  269 cgtggcagtgcta 281  Q
    ||||||| |||||    
T  56014878 cgtggcactgcta 56014890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 261
Target Start/End: Original strand, 24349672 - 24349819
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatca 213  Q
    ||||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||||| |||| ||| |||| || ||||| || ||||  ||   |||||||    
T  24349672 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatca 24349771  T
Q  214 tttaagaattggtttctcaacctagttaatcactgccacgtcactaat 261  Q
    ||||| | || ||  |||  || |||||||||||||||||||||||||    
T  24349772 tttaaaatttcgtccctctccccagttaatcactgccacgtcactaat 24349819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 256
Target Start/End: Complemental strand, 55867545 - 55867402
Alignment:
Q  114 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatc 212  Q
    |||||||| ||||||| |||  ||| || ||||| ||||| | ||||||||||||| ||||||||||||| || ||||| |||||||  |   |||||||    
T  55867545 ataggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatccttgcaaactacccttgcattgtttaatc 55867446  T
Q  213 atttaagaattggtttctcaacctagttaatcactgccacgtca 256  Q
    |||||| | || ||  ||   || ||||||||||||||||||||    
T  55867445 atttaaaatttcgtccctattcccagttaatcactgccacgtca 55867402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 27068919 - 27068993
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| |  |||| |||||||| || |||||||||| |||| ||||||| ||||||||    
T  27068919 atgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccctt 27068993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 27069327 - 27069253
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| || |||||||| | |||| ||||||| ||||||||    
T  27069327 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttaccctt 27069253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 54858569 - 54858643
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| || |||||||||| |||| ||| ||| ||||||||    
T  54858569 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttaccctt 54858643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 196
Target Start/End: Original strand, 24711110 - 24711191
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacc 196  Q
    |||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||||||| |||||    
T  24711110 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacc 24711191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 275
Target Start/End: Complemental strand, 35508670 - 35508509
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatca 213  Q
    ||||||| ||||||| |||  || ||| ||||| ||||| | ||||||||  |||| |||||||||||||||  ||| ||||||||  |   ||||||||    
T  35508670 taggcttaaatatgtattttatcattgcaattaggggtcgtttaaaaattaatccttgtaatcgttaattctaacaatttacccttgcattgtttaatca 35508571  T
Q  214 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    ||||| | || || ||||  || | ||||||||||||| |||| ||||||| | ||||||||    
T  35508570 tttaaaatttcgtatctctccccacttaatcactgccatgtcattaatttgatgacgtggca 35508509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 7452108 - 7452072
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  7452108 ttaatcactgccacgtcactaatttgatgacgtggca 7452072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 9144889 - 9144925
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  9144889 ttaatcactgccacgtcactaatttgatgacgtggca 9144925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 16006112 - 16006076
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  16006112 ttaatcactgccacgtcactaatttgatgacgtggca 16006076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 17356048 - 17356084
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  17356048 ttaatcactgccacgtcactaatttgatgacgtggca 17356084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 33247396 - 33247432
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  33247396 ttaatcactgccacgtcactaatttgatgacgtggca 33247432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 34837197 - 34837233
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  34837197 ttaatcactgccacgtcactaatttgatgacgtggca 34837233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 35028303 - 35028267
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  35028303 ttaatcactgccacgtcactaatttgatgacgtggca 35028267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 36009244 - 36009160
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaaggg-tcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccc 197  Q
    ||||||| ||||||| |||  |||||||||||| ||| || | ||||||||||||| ||||||||||||| |||| || ||||||    
T  36009244 taggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcgttaatcctggaaatttaccc 36009160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 42738154 - 42738190
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  42738154 ttaatcactgccacgtcactaatttgatgacgtggca 42738190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 44967192 - 44967228
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  44967192 ttaatcactgccacgtcactaatttgatgacgtggca 44967228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 46661219 - 46661183
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  46661219 ttaatcactgccacgtcactaatttgatgacgtggca 46661183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 168
Target Start/End: Complemental strand, 52909686 - 52909630
Alignment:
Q  112 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc 168  Q
    |||||||||| ||||||| |||| |||||| ||||| || |||| ||||||||||||    
T  52909686 aaataggcttaaatatgtatttcatccttgcaattatggatcatttaaaaattggtc 52909630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 264; Significance: 1e-147; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 116 - 478
Target Start/End: Complemental strand, 40150243 - 40149880
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    |||||||||||||||||||||||||| ||||| ||||||| | ||||||||||| ||||||||||||| || | |||||||||||| ||| |||||||||    
T  40150243 aggctttaatatgtgtttcgtccttgcaattaggggtcattttaaaattggtccctgtaatcgttaatcctagaaaattaccctttcaaagtttaatcat 40150144  T
Q  215 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtgctatcacatcaaaactttacgtgaacggaccaaaat 314  Q
    ||||||||||||  ||||||||| |||||||||||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  40150143 ttaagaattggtccctcaacctaattaatcactgccacatcactaatttacttacgttgcagtgctaacacatcaaaactttacgtgaacggaccaaaat 40150044  T
Q  315 gcccctaaggttctcagacatacgtgtaatgaccgttttacccctaagttcatcttctccatcttcatcttcaaaacccagcacaacaaccactaccatc 414  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  40150043 gcccctaaggctctcagacatactcgtaatgaccgttttacccctaagttcatcttctccatcttcatcttcaaaacccagcgcaacaaccaccaccatc 40149944  T
Q  415 tcctccatcctcaaaaccagcagcatctttttcagtgtgttcaaaggcaccatcaaaattgttt 478  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  40149943 tcctccatcctcaacaccagcagcatctttttcaatgtgttcaaaggcaccatcaaaattgttt 40149880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 116 - 268
Target Start/End: Original strand, 40148897 - 40149050
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    ||||||||||||||||||||||| || |||||  | |||| ||||||||||||| ||||||||||||| || |||||||||||||| ||| |||||||||    
T  40148897 aggctttaatatgtgtttcgtccctgcaattagagctcatttaaaaattggtccatgtaatcgttaatcctagcaaattaccctttcaaagtttaatcat 40148996  T
Q  215 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgctta 268  Q
    ||||||||||||  |||| || ||||||||| || ||||| ||| ||| |||||    
T  40148997 ttaagaattggtccctcatcccagttaatcagtgtcacgtgactgattagctta 40149050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 24141451 - 24141554
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    ||||||||||||||||||||||| || |||||   ||||| ||||||||||||| ||||||||||||| ||||||||||| ||||  ||| |||||||||    
T  24141451 aggctttaatatgtgtttcgtccctgcaattagacgtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatcat 24141550  T
Q  215 ttaa 218  Q
    ||||    
T  24141551 ttaa 24141554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 115 - 264
Target Start/End: Original strand, 5993887 - 5994037
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatca 213  Q
    ||||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||| |||||||||| |||||||||||| ||||||||  |   ||||||||    
T  5993887 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaattctggcaatttacccttgcattgtttaatca 5993986  T
Q  214 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 264  Q
    ||||| | || ||  |||  || | ||||||||||||| ||||||||||||    
T  5993987 tttaaaatttcgtccctctccccacttaatcactgccatgtcactaatttg 5994037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 117 - 257
Target Start/End: Complemental strand, 30096970 - 30096829
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||| |||| || |||| ||| |||||||| ||||||| |||||| |||||| ||||  | ||||||||||||| |||||||  ||||  ||||||| |    
T  30096970 ggcttaaatacgtatttcatccctgtaattaggggtcatttaaaaaatggtccctgtatccattaattctggcaatttaccctcctaaaaattaatcact 30096871  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcac 257  Q
    ||| |||||||  ||||||||||||||||| |||||| ||||    
T  30096870 taaaaattggtccctcaacctagttaatcagtgccacatcac 30096829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 123 - 264
Target Start/End: Original strand, 35512154 - 35512296
Alignment:
Q  123 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 221  Q
    ||||||| |||| |||||| ||||||||||| | ||||||||||| |||||||||| |||| ||||||| ||||||||  |   ||||||||||||| |     
T  35512154 aatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaat 35512253  T
Q  222 ttggtttctcaacctagttaatcactgccacgtcactaatttg 264  Q
    || ||  |||  || | |||||||||||||| |||||||||||    
T  35512254 ttcgtccctctccccacttaatcactgccacatcactaatttg 35512296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 115 - 262
Target Start/End: Original strand, 20840531 - 20840679
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatca 213  Q
    ||||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||| ||||||||||||||| || |||| ||||||||  |   |||||| |    
T  20840531 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtacctgtaatcgttaatcctagcaatttacccttgcattgtttaatga 20840630  T
Q  214 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatt 262  Q
    ||||| | || ||  |||  || | ||||||||||||||||||||||||    
T  20840631 tttaaaattttgtccctctccccacttaatcactgccacgtcactaatt 20840679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 8875458 - 8875589
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattg 224  Q
    |||||||||||||||| ||||||| ||||| |||||||| || ||||||||||||||| ||||||| |||| |||  |   ||||||||||||| | ||     
T  8875458 atgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacacttgcattgtttaatcatttaaaatttc 8875557  T
Q  225 gtttctcaacctagttaatcactgccacgtca 256  Q
    |||  |  ||| | ||||||||||||||||||    
T  8875558 gttctttgaccaacttaatcactgccacgtca 8875589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 17544478 - 17544391
Alignment:
Q  113 aataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    ||||||||| |  |||||||||||||||| ||||| | ||||| |||||||| || ||||||||||||||| ||||||| ||||||||    
T  17544478 aataggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgttaatcctggcaatttaccctt 17544391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 264
Target Start/End: Complemental strand, 20814566 - 20814415
Alignment:
Q  114 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatc 212  Q
    |||||||| ||||||| |||| |||||| ||||| ||||| | |||||||||||| ||||||||| |||| || |||| |||| |||  |   |||||||    
T  20814566 ataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctagcaatttacacttgcattgtttaatc 20814467  T
Q  213 atttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 264  Q
    |||||| | || ||  |||  |||| ||||||||||||| ||||||||||||    
T  20814466 atttaaaattttgtccctctccctacttaatcactgccatgtcactaatttg 20814415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 33871348 - 33871422
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||| ||||||| ||||||| ||||| |||||||| |||| |||||||| |||||||||||| ||||||||    
T  33871348 atgtgttttgtccttgcaattaagtgtcatttaaaaattagtccctgtaatcgctaattctggcaatttaccctt 33871422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 114 - 275
Target Start/End: Original strand, 39453297 - 39453459
Alignment:
Q  114 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatc 212  Q
    |||| ||| ||||||| |||| |||||| ||||| ||||| | |||||||||||| ||||||||| |||| ||||||| ||||||||  |   |||||||    
T  39453297 atagacttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatc 39453396  T
Q  213 atttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||| | || ||  |||  || | |||||||||| || |||||||||||| | ||||||||    
T  39453397 atttaaaatttcgtccctctccccacttaatcactggcatgtcactaatttgatgacgtggca 39453459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 114 - 275
Target Start/End: Complemental strand, 42067955 - 42067790
Alignment:
Q  114 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatc 212  Q
    ||||||||||||||||||||| ||| || ||||| ||||||| ||||| ||||| |||||||| | |||| |||||||| | ||| |  ||| |||||||    
T  42067955 ataggctttaatatgtgtttcatccctgcaattaggggtcatttaaaatttggtccctgtaattgataatcctggcaaactgcccctgcaaactttaatc 42067856  T
Q  213 atttaagaattggt--ttc-tcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||| | || ||  ||| ||| |  |||||||||||||||||||||| ||| ||| | ||||||    
T  42067855 atttaaaatttcgtccttcatcatcaaagttaatcactgccacgtcactgattagctgatgtggca 42067790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 3529270 - 3529189
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccc 197  Q
    ||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||||| ||||||||||||| ||||||| ||||||    
T  3529270 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttaccc 3529189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 8875684 - 8875619
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaa 190  Q
    |||||||||||||||| ||||| | ||||| |||||||| || ||||||||||||||| |||||||    
T  8875684 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaa 8875619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 275
Target Start/End: Complemental strand, 13362650 - 13362497
Alignment:
Q  123 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 221  Q
    ||||||| |||| || ||| ||||| ||||| | |||||||||||||| ||||||| ||||  |||||| ||||||||  |   ||||||||||||| |     
T  13362650 aatatgtatttcatcattgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcatggcaatttacccttgcattgtttaatcatttaaaat 13362551  T
Q  222 ttggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    || || ||||  || | ||||||||||| || ||||||||||| | ||||||||    
T  13362550 ttagtctctctccccacttaatcactgctacatcactaatttgatgacgtggca 13362497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 114 - 275
Target Start/End: Complemental strand, 14194853 - 14194692
Alignment:
Q  114 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattacccttttaaattttaatca 213  Q
    |||||||| || |||| |||| |||||||||||| ||||| | |||||||||| | ||||||   |||| ||||||| ||||||||  |   ||||||||    
T  14194853 ataggcttaaaaatgtctttcatccttgtaattaggggtcgtttaaaaattggccatgtaattactaatcctggcaatttacccttgcattgtttaatca 14194754  T
Q  214 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    ||||| | || ||  |||  || | ||||||||||| | |||||||||||| | ||||||||    
T  14194753 tttaaaatttcgtccctctccccacttaatcactgctatgtcactaatttgatgacgtggca 14194692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 116 - 264
Target Start/End: Complemental strand, 16157284 - 16157135
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    |||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||| ||| ||||||||||| ||| ||| ||||||||  |   |||||||||    
T  16157284 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgttaatcctgacaatttacccttgcattgtttaatcat 16157185  T
Q  215 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 264  Q
    |||| | || ||  |||  || | |||||| |||||| ||||||||||||    
T  16157184 ttaaaattttgtccctctccccacttaatccctgccatgtcactaatttg 16157135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 275
Target Start/End: Complemental strand, 19892730 - 19892577
Alignment:
Q  123 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 221  Q
    ||||||| |||| |||||| |||||  |||| | |||||||||||| |||||||||||||| ||  ||| ||||||||  |   ||||||||||||| |     
T  19892730 aatatgtatttcatccttgcaattagaggtcgtttaaaaattggtctctgtaatcgttaatcctaacaatttacccttgcattgtttaatcatttaaaat 19892631  T
Q  222 ttggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    || ||   ||  || | |||||||||||||||||||||||||| | ||||||||    
T  19892630 ttcgtcattctccccacttaatcactgccacgtcactaatttgatgacgtggca 19892577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 199
Target Start/End: Complemental strand, 38475429 - 38475344
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 199  Q
    ||||||| ||||||  |||| |||||| ||||| ||||| | ||||||||||||| ||||||||||||| ||| ||| ||||||||    
T  38475429 taggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatcctgacaatttaccctt 38475344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 275
Target Start/End: Complemental strand, 32242670 - 32242511
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    |||||| ||||||| |||| |||||| ||||| ||||  | |||||||| |||||||| ||| |||| || ||||| || ||||  ||   |||||||||    
T  32242670 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtcctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 32242571  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    ||| | || ||   |  ||| | |||||||||||||||||||||||||| | ||||||||    
T  32242570 taaaattttgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggca 32242511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 264
Target Start/End: Complemental strand, 5024440 - 5024298
Alignment:
Q  123 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 221  Q
    ||||||| |||| |||||| ||||| ||||| | |||||||||||| | ||||||| |||| ||| ||| ||||| ||  |   ||||||||||||| |     
T  5024440 aatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcattgtaatcgctaatcctgacaatttaccattgcattgtttaatcatttaaaat 5024341  T
Q  222 ttggtttctcaacctagttaatcactgccacgtcactaatttg 264  Q
    || ||| |||  || | |||||||||||||| |||||||||||    
T  5024340 ttcgttcctctccccacttaatcactgccacatcactaatttg 5024298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 11761748 - 11761830
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccc 197  Q
    |||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||||||| ||||||    
T  11761748 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccc 11761830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 20152790 - 20152864
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 199  Q
    ||||||||||||| || ||||||| ||||| |||||||| ||| ||||||||| |||| |||| || ||||||||    
T  20152790 atgtgtttcgtccatgcaattaagcgtcatttaaaaattagtctctgtaatcgctaatcctggaaatttaccctt 20152864  T

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Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 218
Target Start/End: Complemental strand, 28771266 - 28771164
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||| ||||||| |||  |||||||||||| ||||| | ||||||||||||| |||||||| ||||  |||||| |||||| | ||   ||||||||||    
T  28771266 ggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgtattgtttaatcatt 28771167  T
Q  216 taa 218  Q
    |||    
T  28771166 taa 28771164  T

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Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 42063288 - 42063394
Alignment:
Q  151 gtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattggtttctcaacctagttaatcactgc 249  Q
    ||||| |||||||||||| ||||||||| |||| |||||||||| ||| |  |||| |||||||||||| | || ||  |||| |  || ||||||||||    
T  42063288 gtcatttaaaaattggtctctgtaatcgctaatcctggcaaattgcccctgcaaatgttaatcatttaaaattttgtccctcatcacaggtaatcactgc 42063387  T
Q  250 cacgtca 256  Q
    |||||||    
T  42063388 cacgtca 42063394  T

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Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 275
Target Start/End: Original strand, 19892314 - 19892467
Alignment:
Q  123 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 221  Q
    ||||||| |||| |||||| ||||| ||||| | ||||||||||||| |||| |||||||| || ||||| || |||| |||   |||||||||||| |     
T  19892314 aatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgtaatcattaatcatttaaaat 19892413  T
Q  222 ttggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    || ||   |  | | | |||||||||||||||| ||||||||| | ||||||||    
T  19892414 ttcgtcctttgatcaacttaatcactgccacgtaactaatttgatgacgtggca 19892467  T

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Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 27587148 - 27587229
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccc 197  Q
    ||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||||||| ||||||    
T  27587148 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccc 27587229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 39453728 - 39453675
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc 169  Q
    |||||| ||||||| |||| |||||| ||||| ||||||| |||||||||||||    
T  39453728 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtcc 39453675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 1506241 - 1506205
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  1506241 ttaatcactgccacgtcactaatttgatgacgtggca 1506205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 5024142 - 5024178
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  5024142 ttaatcactgccacgtcactaatttgatgacgtggca 5024178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 6301848 - 6301812
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  6301848 ttaatcactgccacgtcactaatttgatgacgtggca 6301812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 6757988 - 6758024
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  6757988 ttaatcactgccacgtcactaatttgatgacgtggca 6758024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 116 - 275
Target Start/End: Original strand, 11047437 - 11047596
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtca-tctaaaaattggtcctgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    |||||| ||||||| ||||  ||||| ||||| | |||| | ||||||||| ||| ||||||| ||||  |||||| ||||||||  |   |||||||||    
T  11047437 aggcttaaatatgtatttcacccttgcaattaggagtcagtttaaaaattg-tcccgtaatcgctaatcttggcaatttacccttgcattgtttaatcat 11047535  T
Q  215 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||| | || || ||||  || | ||||||||||||| |||||||||||| | ||||||||    
T  11047536 ttaaaatttcgtctctctccccacttaatcactgccatgtcactaatttgatgacgtggca 11047596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 275
Target Start/End: Complemental strand, 14849135 - 14848975
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    |||||| |||||||||| |||||| ||| || || |||| |||||| |||||| |||| || |||||  |||||  || ||||   ||| ||||||||||    
T  14849135 ggcttttatatgtgtttagtccttctaaatagggatcatttaaaaaatggtccatgtattccttaatcgtggcattttgccctaccaaaatttaatcatt 14849036  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcacta-atttgcttacgtggca 275  Q
    ||| | |||||  |||| || | |||||||||||||| |||||| ||| ||| ||||||||    
T  14849035 taaaatttggtccctcaccccacttaatcactgccacatcactagattagctgacgtggca 14848975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 24547554 - 24547470
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 199  Q
    |||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||||| | |||||| |||| ||||||| ||||||||    
T  24547554 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttataatcgctaatcctggcaatttaccctt 24547470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 28770992 - 28771028
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  28770992 ttaatcactgccacgtcactaatttgatgacgtggca 28771028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 31482525 - 31482561
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  31482525 ttaatcactgccacgtcactaatttgatgacgtggca 31482561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 38475156 - 38475192
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  38475156 ttaatcactgccacgtcactaatttgatgacgtggca 38475192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 261; Significance: 1e-145; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 131 - 478
Target Start/End: Original strand, 9337040 - 9337388
Alignment:
Q  131 tttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattggtttc 229  Q
    ||||||| ||| |||||  |||||| | |||||||||||| ||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||  |    
T  9337040 tttcgtctttgcaattagaggtcattttaaaattggtccttgtaatcgttaattttggcaaattaccctttcaaagtttaatcatttaagaattggtccc 9337139  T
Q  230 tcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtgctatcacatcaaaactttacgtgaacggaccaaaatgcccctaaggttctc 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9337140 tcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtgctaacacatcaaaactttacgtgaacggaccaaaatgcccctaaggttctc 9337239  T
Q  330 agacatacgtgtaatgaccgttttacccctaagttcatcttctccatcttcatcttcaaaacccagcacaacaaccactaccatctcctccatcctcaaa 429  Q
    ||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||     
T  9337240 agacaaactcgtaatgaccgttttacccctaagttcatcttctccatcttcatcttcaaaacccagcgcaacaactaccaccatctcctccatcctcaac 9337339  T
Q  430 accagcagcatctttttcagtgtgttcaaaggcaccatcaaaattgttt 478  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9337340 accagcagcatctttttcagtgtgttgaaaggcaccatcaaaattgttt 9337388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 296 - 400
Target Start/End: Original strand, 19381898 - 19382002
Alignment:
Q  296 tacgtgaacggaccaaaatgcccctaaggttctcagacatacgtgtaatgaccgttttacccctaagttcatcttctccatcttcatcttcaaaacccag 395  Q
    |||||||| |||||||| ||||| | ||| ||||||||||| | |||||||||||||||||||| |||||||||||||| |||||||||||||||||||     
T  19381898 tacgtgaatggaccaaagtgcccatgaggatctcagacatatgcgtaatgaccgttttaccccttagttcatcttctccctcttcatcttcaaaacccat 19381997  T
Q  396 cacaa 400  Q
    |||||    
T  19381998 cacaa 19382002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 117 - 218
Target Start/End: Complemental strand, 2535978 - 2535876
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||||||||||| |||||||| || ||||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||  ||| ||||||||||    
T  2535978 ggctttaatatgtatttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattacccttacaaagtttaatcatt 2535879  T
Q  216 taa 218  Q
    |||    
T  2535878 taa 2535876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 172 - 337
Target Start/End: Complemental strand, 8747636 - 8747471
Alignment:
Q  172 taatcgttaattctggcaaattacccttttaaattttaatcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgt 271  Q
    ||||||||||| |||  |||||||||||  |||  |||||||||||| | || ||  || |||| | |||||||| ||||||||| ||||||| | ||||    
T  8747636 taatcgttaatcctgaaaaattacccttgcaaacattaatcatttaaaatttcgtcccttaacccacttaatcaccgccacgtcagtaatttgatgacgt 8747537  T
Q  272 ggcagtgctatcacatcaaaactttacgtgaacggaccaaaatgcccctaaggttctcagacatac 337  Q
    ||||||| |  | |||||||| ||||||||||| |||| |||||||||||||||||| | ||||||    
T  8747536 ggcagtgttgacccatcaaaagtttacgtgaacagaccgaaatgcccctaaggttctaacacatac 8747471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 10749937 - 10749853
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||||||||||||| ||||| || |||| ||||||||||||| ||||||||||||| ||| ||||||||||||    
T  10749937 aggctttaatatgtgtttcgtccttgcaattagggatcatttaaaaattggtccatgtaatcgttaatcctgtcaaattaccctt 10749853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 4995085 - 4995002
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||| ||||||| |||| |||||| ||||| ||||||| ||||||||||||||||||||| |||| ||| ||| ||||||||    
T  4995085 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtcctgtaatcgctaatcctgacaatttaccctt 4995002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 117 - 275
Target Start/End: Complemental strand, 16388954 - 16388795
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattgg-tcctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||| ||||||| |||| |||||| ||||| ||||||| |||||||||| || |||||| | |||| ||||||| ||||||||  |   ||||||||||    
T  16388954 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggttcatgtaattgctaatcctggcaatttacccttgcattgtttaatcatt 16388855  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    ||| | || ||  |||  || | |||||||||||||||||||||||||| | ||||||||    
T  16388854 taaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtggca 16388795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 199
Target Start/End: Original strand, 7983423 - 7983511
Alignment:
Q  112 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||| | ||||||||||||||||| ||||| | ||||| |||||||| || |||||||||| |||| ||||||| ||||||||    
T  7983423 aaataggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccctt 7983511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 118 - 193
Target Start/End: Complemental strand, 11763103 - 11763027
Alignment:
Q  118 gctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaatt 193  Q
    ||||||||||||||||||||| || |||||||| |||| ||||||||||||| |||||||| |||| ||| ||||||    
T  11763103 gctttaatatgtgtttcgtccctgcaattaaggatcatttaaaaattggtccttgtaatcgctaatcctgacaaatt 11763027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 25124980 - 25124906
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| ||| ||||||||| |||||||||||| ||||||||    
T  25124980 atgtgtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaattctggcaatttaccctt 25124906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 199
Target Start/End: Complemental strand, 23698674 - 23698589
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    ||||||| ||||||| |||  |||||||||||| ||||| | ||||||||||| |||||||||| |||| ||||||| ||||||||    
T  23698674 taggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccctt 23698589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 264
Target Start/End: Complemental strand, 4406088 - 4405940
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||| ||||||| |||| |||||||||||| ||||  | ||||||||||||| |||| | |||||| || |||| ||||||||  ||  ||||||||||    
T  4406088 ggcttaaatatgtatttcatccttgtaattaggggttgtttaaaaattggtccatgtatttgttaatccttgcaatttacccttgcaatgtttaatcatt 4405989  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcactaatttg 264  Q
    ||| | || ||  |||  || | |||||||||| |||||||||||||||    
T  4405988 taaaatttcgtccctcttcccacttaatcactgtcacgtcactaatttg 4405940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 263
Target Start/End: Original strand, 13186059 - 13186207
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    |||||| ||||||| |||| |||||| ||||| || || | ||||||||||| | |||||||| |||| ||| ||| ||||||||  |   |||||||||    
T  13186059 aggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggttcatgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 13186158  T
Q  215 ttaagaattggtttctcaacctagttaatcactgccacgtcactaattt 263  Q
    |||| | || || ||||  || | |||||||||||||||||||||||||    
T  13186159 ttaaaatttcgtctctctccccacttaatcactgccacgtcactaattt 13186207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 27500492 - 27500424
Alignment:
Q  129 tgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacc 196  Q
    ||||||||||||| ||||| ||||||| ||||||||||||| ||||||||||||| |||  ||||||||    
T  27500492 tgtttcgtccttgcaattatgggtcatttaaaaattggtccatgtaatcgttaatcctgaaaaattacc 27500424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 264
Target Start/End: Original strand, 39071676 - 39071824
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||| ||| ||||||||  |   ||||||||||    
T  39071676 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 39071775  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcactaatttg 264  Q
    ||| | || ||  |||  || | |||||||||||| |||||||||||||    
T  39071776 taaaatttcgtccctctccccacttaatcactgccgcgtcactaatttg 39071824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 380 - 427
Target Start/End: Complemental strand, 8747453 - 8747406
Alignment:
Q  380 catcttcaaaacccagcacaacaaccactaccatctcctccatcctca 427  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||||||    
T  8747453 catcttcaaaacccagcaccacaaccaccaccatctccttcatcctca 8747406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 10445752 - 10445621
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattg 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| || |||||||||| |||| ||||||| ||||||||  |   ||||||||||||| | ||     
T  10445752 atgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 10445653  T
Q  225 gtttctcaacctagttaatcactgccacgtca 256  Q
    || | |  ||| | ||||||||||||||||||    
T  10445652 gtcttttgaccaacttaatcactgccacgtca 10445621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 44664516 - 44664591
Alignment:
Q  125 tatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    ||||||||||||||||| ||||| | ||||| |||||||| || ||||||||||||||| ||||||| ||| ||||    
T  44664516 tatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttaacctt 44664591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 8746332 - 8746426
Alignment:
Q  125 tatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 218  Q
    |||||||||| ||| || ||||| ||||||| ||||||| |||| ||||||||||||||  || ||||||||||||  |||  ||||||||||||    
T  8746332 tatgtgtttcctccctgcaattaggggtcatttaaaaatcggtcactgtaatcgttaatcgtgacaaattacccttgcaaaccttaatcatttaa 8746426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 275
Target Start/End: Complemental strand, 11675082 - 11674932
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattg 224  Q
    ||||| || ||||||| ||||| | ||||| |||||||| |||| |||||| | |||| ||||||| ||| ||||  || | |||||||||||| | |||    
T  11675082 atgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttg 11674983  T
Q  225 gtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    ||   |  ||| | |||||||||||||||||||||||||| | ||||||||    
T  11674982 gtccttggaccaacttaatcactgccacgtcactaatttgatgacgtggca 11674932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 35634516 - 35634442
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||||| ||||| |||||||| || |||||||||| |||| ||| ||| ||||||||    
T  35634516 atgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttaccctt 35634442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 199
Target Start/End: Complemental strand, 23663944 - 23663859
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 199  Q
    ||||||| ||||||| |||  |||||| ||||| ||||| | |||||||||||| ||||||||| |||| ||||||| ||||||||    
T  23663944 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttaccctt 23663859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 8317017 - 8316933
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 199  Q
    |||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||||| |||||||| |||| ||||||| ||||||||    
T  8317017 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttaccctt 8316933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 234157 - 234083
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| |  |||| |||||||| || |||||||| |||||| ||||||| ||||||||    
T  234157 atgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttaccctt 234083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 710568 - 710494
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| |  |||| |||||||| || |||||||| |||||| ||||||| ||||||||    
T  710568 atgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttaccctt 710494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 747780 - 747706
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| |  |||| |||||||| || |||||||| |||||| ||||||| ||||||||    
T  747780 atgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttaccctt 747706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 871675 - 871601
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| |  |||| |||||||| || |||||||| |||||| ||||||| ||||||||    
T  871675 atgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttaccctt 871601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 275
Target Start/End: Complemental strand, 13186366 - 13186328
Alignment:
Q  237 agttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  13186366 agttaatcactgccacgtcactaatttgatgacgtggca 13186328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 275
Target Start/End: Complemental strand, 31873326 - 31873168
Alignment:
Q  118 gctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaat-cgttaattctggcaaattacccttttaaattttaatcattt 216  Q
    ||||| |||||||||| |||| || || || ||||||| |||||| ||||||| | || |||||||  |||||| || ||||   ||| |||||||||||    
T  31873326 gcttttatatgtgtttagtccctgcaaatatgggtcatttaaaaaatggtccttttattcgttaatcttggcaatttgccctcccaaaatttaatcattt 31873227  T
Q  217 aagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    || | || ||| |||  || | ||||||||||| || ||||||||||| | ||||||||    
T  31873226 aaaattttgttcctcttcccacttaatcactgctacatcactaatttgatgacgtggca 31873168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 44664925 - 44664851
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| ||| ||||||||| |||| ||| ||| ||||||||    
T  44664925 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttaccctt 44664851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 1425430 - 1425369
Alignment:
Q  136 tccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattaccc 197  Q
    ||||||||||||  |||| | ||||||||||||||||||||  |||| ||||||| ||||||    
T  1425430 tccttgtaattagaggtcgtttaaaaattggtcctgtaatcactaatcctggcaatttaccc 1425369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 275
Target Start/End: Original strand, 23663543 - 23663704
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatca 213  Q
    ||||||| ||||||  |||| |||||| ||||| ||||| | ||||||||||||| |||| |||||||| || | ||| || ||||  ||   |||||||    
T  23663543 taggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgttaatccttggaaactaaccttgaaatcattaatca 23663642  T
Q  214 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    ||||| | || ||   |  ||| | |||||||||||||||||||||||||| || |||||||    
T  23663643 tttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatttcgtggca 23663704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 3041579 - 3041615
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  3041579 ttaatcactgccacgtcactaatttgatgacgtggca 3041615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 36928781 - 36928745
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  36928781 ttaatcactgccacgtcactaatttgatgacgtggca 36928745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 38845422 - 38845458
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  38845422 ttaatcactgccacgtcactaatttgatgacgtggca 38845458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 40775773 - 40775809
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  40775773 ttaatcactgccacgtcactaatttgatgacgtggca 40775809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 44406980 - 44407016
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  44406980 ttaatcactgccacgtcactaatttgatgacgtggca 44407016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 3e-43; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 121 - 427
Target Start/End: Complemental strand, 22828242 - 22827927
Alignment:
Q  121 ttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcatttaag 219  Q
    |||| ||||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||||  || |||||||||| |  |||  ||||||||||||     
T  22828242 ttaaaatgtgtttcatccttgtaattaggggtcatttaaaaattggtccttgtaatcgttaatcttgacaaattacccctgcaaaccttaatcatttaaa 22828143  T
Q  220 aattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtgctatcacatcaaaactttacgtgaacggaccaaaatgcccc 319  Q
    | ||  |  || |||| | |||||||| |||| || | ||||||| | ||||||||||| |  | |||||||| |||| |||||| |||| |||||||||    
T  22828142 atttcatcacttaacccacttaatcaccgccatgttagtaatttgatgacgtggcagtgttgacccatcaaaagtttaggtgaacagaccgaaatgcccc 22828043  T
Q  320 taaggttctcagacatacgt------gtaatgaccgttttacccctaagttcatct--tctccatcttcatcttcaaaacccagcacaacaaccactacc 411  Q
    ||||||||| | ||||||        ||||| || ||||||||| |||||||||||  ||||| ||||||||||||||||||||||| |||||||| |||    
T  22828042 taaggttctaacacatacacttaaacgtaataactgttttacccttaagttcatctcttctccttcttcatcttcaaaacccagcaccacaaccaccacc 22827943  T
Q  412 atctcctccatcctca 427  Q
    ||||||| ||||||||    
T  22827942 atctccttcatcctca 22827927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 115 - 277
Target Start/End: Complemental strand, 5457337 - 5457174
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatca 213  Q
    ||||||| ||||||| |||| |||||| ||||| ||||| | |||||||||||||| ||| |||||||| || |||||||||||||| ||  ||||||||    
T  5457337 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaattaccctttcaatgtttaatca 5457238  T
Q  214 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagt 277  Q
    ||||| | || ||  |||| || |||||||||||||||||||||| ||| ||| ||||||||||    
T  5457237 tttaaaatttcgtccctcatcccagttaatcactgccacgtcactgattagctgacgtggcagt 5457174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 32687396 - 32687499
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    |||||||||||||||||| ||||||||||||| ||||||| ||||| ||||| ||||||||||||||| |||||||||| |||||  |||| ||||||||    
T  32687396 aggctttaatatgtgttttgtccttgtaattaggggtcatttaaaatttggtccctgtaatcgttaatcctggcaaattgcccttgcaaatattaatcat 32687495  T
Q  215 ttaa 218  Q
    ||||    
T  32687496 ttaa 32687499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 112 - 275
Target Start/End: Complemental strand, 28469441 - 28469277
Alignment:
Q  112 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaa 210  Q
    |||||||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||| ||||||||||||||| ||||||| ||||||||  |   |||||    
T  28469441 aaataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccttgcattgtttaa 28469342  T
Q  211 tcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||| | || ||  |||  || | ||||||||| |||||||||||||||| | ||||||||    
T  28469341 tcatttaaaatttcgtccctctccccacttaatcactaccacgtcactaatttgatgacgtggca 28469277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 10092298 - 10092215
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccc 197  Q
    |||||||||||||||||||||||| |||||||| ||||||| ||||||| ||| ||| ||||||||||| ||||||||||||||    
T  10092298 taggctttaatatgtgtttcgtccctgtaattaggggtcatgtaaaaatcggtccctataatcgttaatcctggcaaattaccc 10092215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 32688651 - 32688544
Alignment:
Q  112 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaa 210  Q
    |||||||||||||||||||||||| ||||| ||||| ||||||| ||||| ||||||| |||||||| |||| ||| |||||| |||||  |||| ||||    
T  32688651 aaataggctttaatatgtgtttcgcccttgcaattaggggtcatttaaaatttggtccttgtaatcgctaatcctgacaaattgcccttgcaaatattaa 32688552  T
Q  211 tcatttaa 218  Q
    ||||||||    
T  32688551 tcatttaa 32688544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 117 - 218
Target Start/End: Complemental strand, 18856082 - 18855980
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    |||||| |||| |||||||||| || ||||| ||||||| ||||||||||||| |||||||||||||  |||||||||||||||  ||| ||||||||||    
T  18856082 ggctttgatatatgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcttggcaaattacccttgcaaagtttaatcatt 18855983  T
Q  216 taa 218  Q
    |||    
T  18855982 taa 18855980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 18087766 - 18087626
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||||||||||||||| ||||||| ||||| ||||||| |||||||||||| ||||||||| |||| || ||||| || ||||  || | |||||||||    
T  18087766 ggctttaatatgtgtttagtccttgcaattaggggtcatttaaaaattggtcactgtaatcgctaatccttgcaaaatagccttgcaattattaatcatt 18087667  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtca 256  Q
    ||| | || ||  || |||| | ||||| ||||||||||||    
T  18087666 taaaattttgtcccttaacccacttaatgactgccacgtca 18087626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 22245530 - 22245597
Alignment:
Q  268 acgtggcagtgctatcacatcaaaactttacgtgaacggaccaaaatgcccctaaggttctcagacat 335  Q
    ||||| |||||||  |||||||||| |||||||||||| |||||||||||||||||||||||| ||||    
T  22245530 acgtgacagtgctgacacatcaaaagtttacgtgaacgaaccaaaatgcccctaaggttctcacacat 22245597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 17886922 - 17886778
Alignment:
Q  113 aataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaat 211  Q
    ||||||||| ||||||| |||| |||||| ||||| || |||| ||||||||| ||| |||| |||||||| || ||||| |||||||  |||| |||||    
T  17886922 aataggcttaaatatgtatttcatccttgcaattagggatcatttaaaaattgatccatgtattcgttaatccttgcaaactacccttgcaaatattaat 17886823  T
Q  212 catttaagaattggtttctcaacctagttaatcactgccacgtca 256  Q
    ||||||| | || ||  ||  ||| | ||||||||||||||||||    
T  17886822 catttaaaatttcgtcccttgacccacttaatcactgccacgtca 17886778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 116 - 199
Target Start/End: Original strand, 19204488 - 19204572
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 199  Q
    |||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||||| ||||||||||||||||||||| ||||||||    
T  19204488 aggcttaaatatgtatttgatccttgaaattaggggtcgtttaaaaattggtccctgtaatcgttaattctggcaatttaccctt 19204572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 430 - 478
Target Start/End: Complemental strand, 38477251 - 38477203
Alignment:
Q  430 accagcagcatctttttcagtgtgttcaaaggcaccatcaaaattgttt 478  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||    
T  38477251 accagcagcatctttttcagtgtatttaaaggcaccatcaaaattgttt 38477203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 275
Target Start/End: Complemental strand, 2640598 - 2640447
Alignment:
Q  125 tatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaatt 223  Q
    ||||| |||| ||||| |||||| ||||| | |||||||||| | ||||||||| |||||||||||| ||||||||  |   ||||||||||||| | ||    
T  2640598 tatgtatttcatccttataattaggggtcgtttaaaaattggcctctgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaattt 2640499  T
Q  224 ggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
     || ||||  || | |||||||||| || |||||||||||| | ||||||||    
T  2640498 cgtctctctccccacttaatcactgtcatgtcactaatttgatgacgtggca 2640447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 117 - 278
Target Start/End: Original strand, 43123175 - 43123337
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||| ||||||| |||||||| || ||||| ||||| | ||||||||||| |||||| ||  |||| || ||||| |||||| | ||| | ||||||||    
T  43123175 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaactaccctctcaaagtataatcatt 43123274  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtg 278  Q
    ||| |||| ||  || | || | ||||| |||||||||||||| ||| ||| |||||||||||    
T  43123275 taaaaattagtccctgagcccaattaatgactgccacgtcactgattagctgacgtggcagtg 43123337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 22081569 - 22081642
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| ||||| |||||| |||| ||||||| ||||||||    
T  22081569 atgtgtttcgtccttgcaattatgcgtcatttaaaaattagtcctctaatcgctaatgctggcaatttaccctt 22081642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 275
Target Start/End: Original strand, 10935794 - 10935953
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||| ||| ||| |||| |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||||||| ||||||||  |   ||||||||||    
T  10935794 ggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 10935893  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    ||| | || ||  |||   | | ||||||||||||| |||||||||||| | ||||||||    
T  10935894 taaaatttcgtccctctctccacttaatcactgccatgtcactaatttgatgacgtggca 10935953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 6764175 - 6764263
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgt---aattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    ||||||| |||||||||||||||| ||    ||||| ||||||| ||||||||||| ||||||||| |||||| || ||||||||||||    
T  6764175 taggcttaaatatgtgtttcgtccctgctgcaattaggggtcatttaaaaattggttcctgtaatcattaattttgacaaattaccctt 6764263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 272
Target Start/End: Complemental strand, 20567337 - 20567272
Alignment:
Q  206 tttaatcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtg 272  Q
    |||||||||||||||| ||||  ||||||||||||||||| |||||||||||| ||| ||| |||||    
T  20567337 tttaatcatttaagaactggtc-ctcaacctagttaatcagtgccacgtcactgattagctgacgtg 20567272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 42618328 - 42618254
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaatt-ggtcctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| | ||||||||||| |||| ||||||| ||||||||    
T  42618328 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttaccctt 42618254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 43266275 - 43266349
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||| ||||||||||||| ||| ||| ||||||||    
T  43266275 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctgacaatttaccctt 43266349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 43266683 - 43266609
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||| |||||||| |||||||| ||| ||||||||    
T  43266683 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaattctgacaatttaccctt 43266609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 46205726 - 46205652
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    ||||||||||| |||| |||||| | |||| |||| |||||| ||||||||||||||| ||| ||||||||||||    
T  46205726 atgtgtttcgttcttgcaattaatgatcatttaaagattggttcctgtaatcgttaatcctgacaaattaccctt 46205652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 199
Target Start/End: Complemental strand, 13050211 - 13050126
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    ||||||||||||||||||||||||||| ||||| | || || | ||| || || ||||||||||||||| |||| || ||||||||    
T  13050211 taggctttaatatgtgtttcgtccttgcaattaggcgtaattttaaatttcgtccctgtaatcgttaatcctggtaatttaccctt 13050126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 18086287 - 18086372
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    ||||||||||||||||||| ||||||| ||||| | ||| | ||||||||||| ||||||| || |||| || |||||||| ||||    
T  18086287 taggctttaatatgtgtttagtccttgcaattaggagtcgtttaaaaattggtccctgtaaacgataatccttgcaaattagcctt 18086372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 199
Target Start/End: Original strand, 6571012 - 6571096
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| ||||||||||||||| ||| ||| ||||||||    
T  6571012 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctgacaatttaccctt 6571096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 264
Target Start/End: Original strand, 42731419 - 42731567
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||| ||||||| | || |||||| ||||| ||||| | ||||||||||||| |||||||| |||| ||||||| |||||| |  |   ||||||||||    
T  42731419 ggcttaaatatgtatctcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcatt 42731518  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcactaatttg 264  Q
    ||| | || ||  |||  || | ||||||||||||| ||||||||||||    
T  42731519 taaaatttcgtccctctccccacttaatcactgccatgtcactaatttg 42731567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 13384501 - 13384604
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    ||||||||||| ||||||| ||| || |||||||||||   ||||| ||||| |||||||||| |||| || ||||| |||||||  |||  ||||||||    
T  13384501 aggctttaataagtgtttcatccctgcaattaagggtcgcttaaaatttggtccctgtaatcgctaatcctagcaaactacccttgcaaacgttaatcat 13384600  T
Q  215 ttaa 218  Q
    ||||    
T  13384601 ttaa 13384604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 18670301 - 18670130
Alignment:
Q  107 aaatgaaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaat 205  Q
    |||| |||| ||||| ||||||| |||  |||||| ||||| ||||| | |||||| |||||| |||| |||||||| || |||| || ||||   |||     
T  18670301 aaataaaattggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaag 18670202  T
Q  206 tttaatcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagt 277  Q
    |||||||| |||| | |||||  || | || | ||||| |||||||||||||| ||| ||| ||||||||||    
T  18670201 tttaatcacttaaaatttggtccctaagcccatttaattactgccacgtcactgattagctgacgtggcagt 18670130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 199
Target Start/End: Original strand, 42362450 - 42362533
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 199  Q
    ||||| ||||||| |||| |||||| ||||| | ||| | ||||||||||||| |||| |||||||| || |||||||||||||    
T  42362450 ggcttaaatatgtatttcatccttgcaattaggtgtcgtttaaaaattggtccttgtattcgttaatccttgcaaattaccctt 42362533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 17102019 - 17102101
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccc 197  Q
    |||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||||||| ||||||    
T  17102019 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccc 17102101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 25453545 - 25453471
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||| ||||||||||| ||||| |||||||| || |||| ||||| |||| || |||| ||||||||    
T  25453545 atgtgtttcgtctttgtaattaagcgtcatttaaaaattagtccctgaaatcgctaatcctagcaatttaccctt 25453471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 32068105 - 32068179
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| |||||   ||||| |||||||| |||| |||||||| |||| ||||||| ||||||||    
T  32068105 atgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttaccctt 32068179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 275
Target Start/End: Original strand, 32680604 - 32680754
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattg 224  Q
    ||||| || ||||||| ||||| | ||||| |||||||| || |||||||| | |||| ||| ||| ||| ||||  || | |||||||||||| | |||    
T  32680604 atgtgattagtccttgcaattaggcgtcatttaaaaattcgttcctgtaattgctaatcctgacaatttagccttgcaattgttaatcatttaaaatttg 32680703  T
Q  225 gtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    ||   |  ||| | |||||||||||||||||||||||||| | ||||||||    
T  32680704 gtccttggaccaacttaatcactgccacgtcactaatttgatgacgtggca 32680754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 10600035 - 10600100
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaa 190  Q
    |||||||||||||||| ||||| | ||||| |||||||| || ||| ||||||||||| |||||||    
T  10600035 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcgttaatcctggcaa 10600100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 245
Target Start/End: Original strand, 20425474 - 20425607
Alignment:
Q  113 aataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattgg-tcctgtaatcgttaattctggcaaattacccttttaaattttaat 211  Q
    ||||||||| |||||||  ||| ||| || ||||| || |||| |||||||||| || |||||||| ||||  ||||||| |||||| | ||| ||||||    
T  20425474 aataggcttaaatatgtaattcatccctgcaattagggatcatttaaaaattggttcatgtaatcgataatcttggcaaactaccctctcaaaatttaat 20425573  T
Q  212 catttaagaattggtttctcaacctagttaatca 245  Q
    || |||| | || ||  ||||||| |||||||||    
T  20425574 cacttaaaatttcgtccctcaaccaagttaatca 20425607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 23058846 - 23058773
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattaccct 198  Q
    |||||||||||||||| ||||  | ||||| ||||||||  |||| |||||||||||| ||||||| |||||||    
T  23058846 atgtgtttcgtccttgcaattcggcgtcatttaaaaattaatccttgtaatcgttaatcctggcaatttaccct 23058773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 255
Target Start/End: Complemental strand, 45011034 - 45010893
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattgg-tcctgtaatcgttaattctggcaaattacccttttaaattttaatca 213  Q
    ||||||| ||||||| |||| |||||| ||||| ||||| | |||||||||| || |||| ||| |||| || |||| ||||||||  |   ||||||||    
T  45011034 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaatttacccttgcattgtttaatca 45010935  T
Q  214 tttaagaattggtttctcaacctagttaatcactgccacgtc 255  Q
    ||||| | || || ||||  || | |||||||||||||||||    
T  45010934 tttaaaatttcgtctctctccccacttaatcactgccacgtc 45010893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 6253472 - 6253552
Alignment:
Q  118 gctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccc 197  Q
    |||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||||||| ||||||    
T  6253472 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccc 6253552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 281
Target Start/End: Original strand, 17885749 - 17885793
Alignment:
Q  237 agttaatcactgccacgtcactaatttgcttacgtggcagtgcta 281  Q
    |||||||||||||||||||||||||||| | |  |||||||||||    
T  17885749 agttaatcactgccacgtcactaatttgatgagttggcagtgcta 17885793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 18855408 - 18855476
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaat 182  Q
    ||||||||||||||| |||||||| || || || ||||||| |||||| |||| ||| |||||||||||    
T  18855408 taggctttaatatgtttttcgtccctgcaaataggggtcatttaaaaaatggtccctataatcgttaat 18855476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 19204763 - 19204727
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  19204763 ttaatcactgccacgtcactaatttgatgacgtggca 19204727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 22871431 - 22871467
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  22871431 ttaatcactgccacgtcactaatttgatgacgtggca 22871467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 22871706 - 22871622
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||| ||||||| |||  |||||| ||||| ||||||| ||||||||||| |||||||| | |||| || |||| ||||||||    
T  22871706 aggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatagctaatccttgcaatttaccctt 22871622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 23608808 - 23608860
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc 169  Q
    |||||| |||||||||| ||||||| || || ||||||| |||||||||||||    
T  23608808 ggcttttatatgtgtttagtccttgcaaataggggtcatttaaaaattggtcc 23608860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 27397025 - 27396957
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaat 182  Q
    ||||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||| |||||||||| ||||    
T  27397025 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaat 27396957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 27992013 - 27991977
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  27992013 ttaatcactgccacgtcactaatttgatgacgtggca 27991977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 29144412 - 29144348
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgtt 179  Q
    ||||||| ||||||| |||||||| || ||||| ||||| | |||||||||||| | ||||||||    
T  29144412 taggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtcatataatcgtt 29144348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 30948283 - 30948319
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  30948283 ttaatcactgccacgtcactaatttgatgacgtggca 30948319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 34928773 - 34928809
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  34928773 ttaatcactgccacgtcactaatttgatgacgtggca 34928809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 39686657 - 39686693
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  39686657 ttaatcactgccacgtcactaatttgatgacgtggca 39686693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 199
Target Start/End: Complemental strand, 48789180 - 48789148
Alignment:
Q  167 tcctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||||||||||| ||||||||    
T  48789180 tcctgtaatcgttaattctggcaatttaccctt 48789148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 9e-31; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 125 - 268
Target Start/End: Original strand, 33154885 - 33155029
Alignment:
Q  125 tatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaatt 223  Q
    |||||||||||||| || ||||| ||||||| ||||||||||||| ||||||||||||| ||| ||||||| |||| |||| ||||||||||||||||||    
T  33154885 tatgtgtttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctgacaaattatccttgtaaagtttaatcatttaagaatt 33154984  T
Q  224 ggtttctcaacctagttaatcactgccacgtcactaatttgctta 268  Q
    |||  ||||||| ||||||| | ||||| |||||| ||| |||||    
T  33154985 ggtccctcaacccagttaattagtgccaagtcactgattagctta 33155029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 115 - 235
Target Start/End: Complemental strand, 26718872 - 26718756
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||| |    ||||| |||||||||||||||||||||| |||| |||||||||    
T  26718872 taggctttaatatgtgtttcgtccatgtaattgagggtcatctaaaaattgat----taatcattaattctggcaaattacccttgtaaagtttaatcat 26718777  T
Q  215 ttaagaattggtttctcaacc 235  Q
    |||| |||||||  |||||||    
T  26718776 ttaaaaattggtccctcaacc 26718756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 114 - 218
Target Start/End: Complemental strand, 21186126 - 21186021
Alignment:
Q  114 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatc 212  Q
    |||||||||||||||||||| |||| || ||||| ||||||| ||||||||||| | ||||||||||||| ||||||||||||||||  |||  ||||||    
T  21186126 ataggctttaatatgtgttttgtccatgcaattaggggtcatttaaaaattggtacatgtaatcgttaatcctggcaaattacccttgcaaaccttaatc 21186027  T
Q  213 atttaa 218  Q
    ||||||    
T  21186026 atttaa 21186021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 115 - 218
Target Start/End: Original strand, 1078535 - 1078638
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatca 213  Q
    ||||||||||||||| |||||||| || ||||| ||||||| ||||||||||| |||||||||||||| ||||| |||||| |||| |||| ||||||||    
T  1078535 taggctttaatatgtttttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgttaa-tctggtaaattaaccttgtaaagtttaatca 1078633  T
Q  214 tttaa 218  Q
    |||||    
T  1078634 tttaa 1078638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 115 - 218
Target Start/End: Complemental strand, 1079651 - 1079547
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatca 213  Q
    |||||||||||||||||||| ||| || ||||| ||||||| ||||||||||| ||||||||||||||| ||||||||||| ||||  ||| |||||||     
T  1079651 taggctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatct 1079552  T
Q  214 tttaa 218  Q
    |||||    
T  1079551 tttaa 1079547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 115 - 218
Target Start/End: Original strand, 47856385 - 47856489
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatca 213  Q
    |||||||||||||||||||||||| || ||||||| ||| | ||||||||||||| ||||||||||||| ||| |||||||| |||  ||| ||||||||    
T  47856385 taggctttaatatgtgtttcgtccctgcaattaagcgtcgtttaaaaattggtccttgtaatcgttaatcctgacaaattactcttgcaaagtttaatca 47856484  T
Q  214 tttaa 218  Q
    |||||    
T  47856485 tttaa 47856489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 275
Target Start/End: Complemental strand, 33156413 - 33156263
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattg 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||  |||||||||||||  |||||| ||||||||| |   ||||||||||||| | ||     
T  33156413 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcattgtaatcgttaatcttggcaatttaccctttcattgtttaatcatttaaaatttc 33156314  T
Q  225 gtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    ||  |||  || | |||||||||||||||||||||||| ||| ||||||||    
T  33156313 gtccctccccccacttaatcactgccacgtcactaattagctgacgtggca 33156263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 117 - 218
Target Start/End: Complemental strand, 47857673 - 47857571
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    |||||||||||||||||||||| |||||||| | ||| | ||||||||| || | ||||||||||||||||| |||||| ||||  ||| ||||||||||    
T  47857673 ggctttaatatgtgtttcgtccctgtaattaggtgtcgtttaaaaattgatctttgtaatcgttaattctggtaaattatccttgcaaagtttaatcatt 47857574  T
Q  216 taa 218  Q
    |||    
T  47857573 taa 47857571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 114 - 218
Target Start/End: Original strand, 6956245 - 6956350
Alignment:
Q  114 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatc 212  Q
    ||||| ||||||||||||||||||| || ||||| || |||| |||||||| || ||| ||||||||||| ||||||||||||||||  ||| || ||||    
T  6956245 ataggttttaatatgtgtttcgtccctgcaattagggatcatttaaaaattagtccctataatcgttaatcctggcaaattacccttgcaaacttaaatc 6956344  T
Q  213 atttaa 218  Q
    ||||||    
T  6956345 atttaa 6956350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 32431617 - 32431518
Alignment:
Q  120 tttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 218  Q
    |||||||||| |||||||| |||||||| ||||||| ||||||||||| |||| |||||||||| ||| ||||||| ||||  ||| ||||| |||||||    
T  32431617 tttaatatgtatttcgtccctgtaattaggggtcatttaaaaattggtccctgcaatcgttaatcctgacaaattagccttgcaaagtttaaccatttaa 32431518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 116 - 273
Target Start/End: Original strand, 25107212 - 25107370
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    |||||| | |||||||||| ||| || ||||| ||||||| |||||||||||| || |||||| |||| |||||||||| ||| |  |||| ||||||||    
T  25107212 aggcttaagtatgtgtttcatccctgcaattaggggtcatttaaaaattggtctctctaatcgctaatcctggcaaattgcccctgcaaatgttaatcat 25107311  T
Q  215 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtgg 273  Q
    |||| | || ||  |||| |  |||||||||||||||||||| | ||| ||| ||||||    
T  25107312 ttaaaatttcgtccctcatcacagttaatcactgccacgtcagtgattagctgacgtgg 25107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 278
Target Start/End: Original strand, 21783406 - 21783560
Alignment:
Q  123 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 221  Q
    ||||||| |||| |||||||||||||||||| | ||||  ||||| |||||| ||| |||| || ||||| || ||| | ||| | |||||||| || ||    
T  21783406 aatatgtatttcatccttgtaattaagggtcgtttaaa--ttggttcctgtattcgctaatccttgcaaactatcctctcaaagtataatcattgaaaaa 21783503  T
Q  222 ttggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtg 278  Q
    |||||  || | |||||||||| |||||||||||||| ||| ||| |||||||||||    
T  21783504 ttggtccctgagcctagttaatgactgccacgtcactgattagctgacgtggcagtg 21783560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 118 - 218
Target Start/End: Complemental strand, 23276410 - 23276309
Alignment:
Q  118 gctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcattt 216  Q
    ||||||||||||||||| ||| || ||||| ||||||| ||||||||||| |||||||||| |||| | |||||||||||| |  |||  ||||||||||    
T  23276410 gctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcccggcaaattacccctacaaacgttaatcattt 23276311  T
Q  217 aa 218  Q
    ||    
T  23276310 aa 23276309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 43607782 - 43607855
Alignment:
Q  119 ctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaa 191  Q
    |||||||||||||||||||| || ||||||| ||||| ||||||||||| ||||||||||||||| || |||||    
T  43607782 ctttaatatgtgtttcgtccctgcaattaagcgtcatttaaaaattggtccctgtaatcgttaatccttgcaaa 43607855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 2796176 - 2796262
Alignment:
Q  114 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||| ||||||| |||  |||||| ||||| ||||||| ||||||||||| |||||||||| |||| ||||||| ||||||||    
T  2796176 ataggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcctggcaatttaccctt 2796262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 115 - 264
Target Start/End: Complemental strand, 23458409 - 23458259
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatca 213  Q
    ||||||| ||||||| |||| |||||| ||||| ||||| | |||||||||||| ||||||||| |||| || |||| ||||||||  |   ||||||||    
T  23458409 taggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgctaatccttgcaatttacccttgcattgtttaatca 23458310  T
Q  214 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 264  Q
    ||||| | || ||  |||  || | |||||||||||||| |||||||||||    
T  23458309 tttaaaatttcgtccctctccccacttaatcactgccacatcactaatttg 23458259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 29118536 - 29118610
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| || |||||||||| |||||||||||| ||||||||    
T  29118536 atgtgtttcgtccttgcaattatgcgtcatttaaaaattagtccctgtaatcgctaattctggcaatttaccctt 29118610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 256
Target Start/End: Complemental strand, 9368726 - 9368589
Alignment:
Q  120 tttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 218  Q
    |||||||||| ||||||||||| ||||| ||||| | ||||||||||| ||||||||| ||||| || ||||||||| |||  |   |||||||||||||    
T  9368726 tttaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtccctgtaatcattaatccttgcaaattactcttacattgtttaatcatttaa 9368627  T
Q  219 gaattggtttctcaacctagttaatcactgccacgtca 256  Q
     | || ||| || |||| | ||||| | ||||||||||    
T  9368626 aatttcgttccttaacccacttaatgattgccacgtca 9368589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 275
Target Start/End: Complemental strand, 33689809 - 33689648
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattgg-tcctgtaatcgttaattctggcaaattacccttttaaattttaatca 213  Q
    ||||||| ||||||| |||| || ||| ||||| ||||| | |||||||||| || |||||||| |||| ||||||| ||||||||  |   ||||||||    
T  33689809 taggcttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacccttgcattatttaatca 33689710  T
Q  214 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    ||||| | || ||  |||  || | |||||||||||||||||||||||| | | ||||||||    
T  33689709 tttaaaatttcgtccctctccccacttaatcactgccacgtcactaattcgatgacgtggca 33689648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 43998156 - 43998228
Alignment:
Q  128 gtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattaccctt 199  Q
    ||||||| || ||||||||| | ||||| |||||||| ||||| |||||||||||||||||||| ||||||||    
T  43998156 gtgtttcatcattgtaattatgtgtcatttaaaaattagtccttgtaatcgttaattctggcaatttaccctt 43998228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 275
Target Start/End: Complemental strand, 9294386 - 9294227
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||| ||| |||||| |||| ||||||| ||||||||  |   ||||||||||    
T  9294386 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatcctggcaatttacccttgcattgtttaatcatt 9294287  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    ||| | || ||  |||  || | |||||||||| || |||||||||||| | ||||||||    
T  9294286 taaaatttcgtccctctccccacttaatcactgtcatgtcactaatttgatgacgtggca 9294227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 275
Target Start/End: Complemental strand, 25108522 - 25108364
Alignment:
Q  118 gctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcattt 216  Q
    ||||||||||||||||| ||| || ||||| ||||||| ||||| ||||| |||||||| | |||| |||||||| |  || |  |||  ||||||||||    
T  25108522 gctttaatatgtgtttcatccctgcaattaggggtcatttaaaatttggtccctgtaattgctaatcctggcaaactgtccctgcaaacgttaatcattt 25108423  T
Q  217 aagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    || | || ||   ||| |  |||||||||||||||||||||| ||| ||| ||||||||    
T  25108422 aaaatttcgtccttcatcacagttaatcactgccacgtcactgattagctgacgtggca 25108364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 262
Target Start/End: Original strand, 33689381 - 33689527
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    |||||| ||||||| |||| |||||| ||||| ||||| | |||||||||||| |||| ||| ||||||| ||||| || ||||  ||   |||||||||    
T  33689381 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcatgtattcgctaattcttgcaaactagccttgcaatcattaatcatt 33689480  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcactaatt 262  Q
    ||| | || ||   |  ||| | ||||||||||||||||||||||||    
T  33689481 taaaattttgtcctttgaccaacttaatcactgccacgtcactaatt 33689527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 275
Target Start/End: Original strand, 36314307 - 36314457
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattg 224  Q
    ||||| || ||||||| ||||| | ||||| |||||||| |||| |||||| | |||| ||||||| ||| ||||  || | |||||||||||| | |||    
T  36314307 atgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttg 36314406  T
Q  225 gtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    ||   |  ||| | |||||||||||||||||||||||||| | ||||||||    
T  36314407 gtccttggaccaacttaatcactgccacgtcactaatttgatgacgtggca 36314457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 261
Target Start/End: Complemental strand, 54318059 - 54317914
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    ||||||| |||||||||| ||||||| || || | ||||| ||| || |||||| |||| |||||||| ||| ||| ||||| |   ||| |||||||||    
T  54318059 aggcttttatatgtgtttagtccttgcaaatatgagtcatttaagaaatggtccatgtattcgttaatactgacaatttacc-tcccaaaatttaatcat 54317961  T
Q  215 ttaagaattggtttctcaacctagttaatcactgccacgtcactaat 261  Q
    |||| | || || ||||  |||| |||||||||||||||||||||||    
T  54317960 ttaaaatttcgtctctctccctaattaatcactgccacgtcactaat 54317914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 43608896 - 43608808
Alignment:
Q  131 tttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 218  Q
    |||||||| || ||||| || |||| |||||||||||| |||||||||||||| || | |||||| ||||  ||| |||||||||||||    
T  43608896 tttcgtccctgcaattagggatcatttaaaaattggtctctgtaatcgttaatcctcgtaaattaaccttgcaaagtttaatcatttaa 43608808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 199
Target Start/End: Complemental strand, 3469614 - 3469543
Alignment:
Q  129 tgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    ||||||||||||| ||||| | ||||| |||||||| || |||||||||| |||| ||||||| ||||||||    
T  3469614 tgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttaccctt 3469543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 19741321 - 19741218
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    |||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| |||||||||| ||||  |||||| |||||||| ||   |||||||||    
T  19741321 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccttgtattgtttaatcat 19741222  T
Q  215 ttaa 218  Q
    ||||    
T  19741221 ttaa 19741218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 29118955 - 29118884
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacc 196  Q
    |||||||||||||||| ||||| | ||||| |||||||| ||| ||||||||| |||| ||||||| |||||    
T  29118955 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaatcctggcaatttacc 29118884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 275
Target Start/End: Original strand, 23457988 - 23458138
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattg 224  Q
    |||| |||| |||||| ||||||||||| | ||||||||||||| |||| ||| |||| || ||||| || ||||  ||   |||||||||||| | ||     
T  23457988 atgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaataattaatcatttaaaatttc 23458087  T
Q  225 gtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    ||   |  ||| | |||||||||||||||||||||||||| | ||||||||    
T  23458088 gtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggca 23458138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 32306841 - 32306767
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||  |||||||| |||| ||||||| ||||||||    
T  32306841 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgctaatcctggcaatttaccctt 32306767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 191
Target Start/End: Original strand, 33506187 - 33506253
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaatt-ggtcctgtaatcgttaattctggcaaa 191  Q
    |||||||||||||||| ||||| | ||||| |||||||| | |||| |||||| |||||||||||||    
T  33506187 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctataatcgctaattctggcaaa 33506253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 37778690 - 37778616
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| || |||||||| | |||| ||||||| ||||||||    
T  37778690 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttaccctt 37778616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 40788837 - 40788767
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattac 195  Q
    |||||||||||||||| ||||| | ||||| |||||||| || |||||||||| |||| ||||||| ||||    
T  40788837 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttac 40788767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 195
Target Start/End: Original strand, 41988581 - 41988663
Alignment:
Q  114 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattac 195  Q
    ||||| || ||||||| |||| ||||| ||| |||||||||| ||||||||||| |||||| ||  ||||||| |||||||||    
T  41988581 ataggtttaaatatgtatttcctccttataaataagggtcatttaaaaattggtccctgtattcactaattcttgcaaattac 41988663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 47551502 - 47551576
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| |||||   ||||| |||||||| || |||||||||| |||| ||||||| ||||||||    
T  47551502 atgtgtttcgtccttgcaattagatgtcatttaaaaattagtccctgtaatcgctaatactggcaatttaccctt 47551576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 40758540 - 40758487
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc 168  Q
    ||||||| ||||||| |||| |||||| ||||| ||||||| ||||||||||||    
T  40758540 taggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtc 40758487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 8041890 - 8041854
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  8041890 ttaatcactgccacgtcactaatttgatgacgtggca 8041854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 264
Target Start/End: Original strand, 9367737 - 9367889
Alignment:
Q  113 aataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaat 211  Q
    ||||||||| ||||||| |||  ||| |  ||||| ||||| | |||||| ||||| ||||| ||| |||| || ||||| || ||||  || | |||||    
T  9367737 aataggcttaaatatgtatttaatccctacaattaggggtcgtttaaaaaatggtctctgtattcgctaatccttgcaaactagccttgcaattattaat 9367836  T
Q  212 catttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 264  Q
    ||||||| | || ||  |||| || | ||||||||||||||||||||||||||    
T  9367837 catttaaaatttcgtccctcatcccaattaatcactgccacgtcactaatttg 9367889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 191
Target Start/End: Complemental strand, 36418121 - 36418041
Alignment:
Q  112 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattgg-tcctgtaatcgttaattctggcaaa 191  Q
    |||| ||||| ||||||| |||| |||||||||||| ||||| | |||||||||| ||||||| ||| |||| || |||||    
T  36418121 aaattggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaa 36418041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 48322500 - 48322536
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  48322500 ttaatcactgccacgtcactaatttgatgacgtggca 48322536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 51994313 - 51994233
Alignment:
Q  118 gctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattaccc 197  Q
    |||| ||||||| |||  |||||| ||||| || || | |||||||||||||| ||||||| |||||||||||| ||||||    
T  51994313 gcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaattctggcaatttaccc 51994233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 54466697 - 54466661
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  54466697 ttaatcactgccacgtcactaatttgatgacgtggca 54466661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 55052402 - 55052438
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  55052402 ttaatcactgccacgtcactaatttgatgacgtggca 55052438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 4e-30; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 6589788 - 6589685
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    ||||| ||||||||||||||||| || ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||||||    
T  6589788 aggctataatatgtgtttcgtccctgcaattaagggtcatttaaaaattggtccatgtaatcgttaattctggcaaattacccttgcaaagtttaatcat 6589689  T
Q  215 ttaa 218  Q
    ||||    
T  6589688 ttaa 6589685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 28230168 - 28230065
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    ||||||||||||||||||||||| |||||||| ||||||| ||||||||||| ||||||||||||||| || |||||||||||||| ||| |||||||||    
T  28230168 aggctttaatatgtgtttcgtccctgtaattatgggtcatttaaaaattggtccctgtaatcgttaatcctagcaaattaccctttcaaagtttaatcat 28230069  T
Q  215 ttaa 218  Q
    ||||    
T  28230068 ttaa 28230065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 115 - 263
Target Start/End: Original strand, 28228668 - 28228817
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatca 213  Q
    |||||||||||||||||||||||| || ||||| ||||||| ||||||||||| |||||||||||||||  ||||||||||| |||| ||| ||||||||    
T  28228668 taggctttaatatgtgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcgtggcaaattactctttcaaagtttaatca 28228767  T
Q  214 tttaagaattggtttctcaacctagttaatcactgccacgtcactaattt 263  Q
    ||| | | || ||| || |||| | ||||| ||||||| ||| |||||||    
T  28228768 tttgaaatttagttccttaacccacttaatgactgccatgtccctaattt 28228817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 118 - 261
Target Start/End: Complemental strand, 3653506 - 3653363
Alignment:
Q  118 gctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcattt 216  Q
    ||||||||| |||| |||||| |||||||| ||||||| ||||||||||||| |||||||||||| |||||||||||||||||  ||| |||||||||||    
T  3653506 gctttaatacgtgtgtcgtccctgtaattatgggtcatttaaaaattggtccatgtaatcgttaa-tctggcaaattacccttgcaaagtttaatcattt 3653408  T
Q  217 aagaattggtttctcaacctagttaatcactgccacgtcactaat 261  Q
    || | || ||  |||  || ||||||||||| |||||||||||||    
T  3653407 aaaatttcgtccctcttccaagttaatcactaccacgtcactaat 3653363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 41587244 - 41587317
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||| |||| |||||||||||    
T  41587244 atgtgtttcgtccttgcaattaagagtcatttaaaaattggtcctgtaatcgttaatcctggaaaattaccctt 41587317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 256
Target Start/End: Complemental strand, 43742105 - 43741964
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    |||||| ||||||| |||||||| || ||||   |||||| ||||||||||||| ||||||| ||||| ||| ||||||||||||  ||| |||||||||    
T  43742105 aggcttcaatatgtatttcgtccctgcaattggaggtcatttaaaaattggtccatgtaatcattaatcctgacaaattacccttgcaaagtttaatcat 43742006  T
Q  215 ttaagaattggtttctcaacctagttaatcactgccacgtca 256  Q
    |||| ||||| |  ||||||| ||||||||  ||||||||||    
T  43742005 ttaaaaattgatccctcaacccagttaatcggtgccacgtca 43741964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 202781 - 202682
Alignment:
Q  120 tttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 218  Q
    |||||||||||||| |||| |||||||| ||||||| |||||||| |||| ||||||||||||| ||||||||||| ||||  | | |||||||||||||    
T  202781 tttaatatgtgttttgtccctgtaattaggggtcatttaaaaattcgtccatgtaatcgttaatcctggcaaattagccttgcagagtttaatcatttaa 202682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 117 - 275
Target Start/End: Original strand, 39423515 - 39423674
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||| |||| || |||| |||||||||||| ||||| | |||||||||||| ||||||||| |||||||||||| ||| |||| ||   ||||||||||    
T  39423515 ggcttaaatacgtatttcatccttgtaattacgggtcgtttaaaaattggtctctgtaatcgctaattctggcaatttatccttgtattgtttaatcatt 39423614  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    ||| | || ||  |||  || | ||||||||||||| |||||||||||| | ||||||||    
T  39423615 taaaatttcgtccctctccccacttaatcactgccatgtcactaatttgatgacgtggca 39423674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 114 - 218
Target Start/End: Complemental strand, 39936677 - 39936573
Alignment:
Q  114 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatc 212  Q
    ||||||||||||||||||||||||| || ||||| | ||  | | ||||||||||| ||||||||||||| ||||||||||||||||  ||| |||||||    
T  39936677 ataggctttaatatgtgtttcgtccctgcaattaggcgtggt-ttaaaattggtccttgtaatcgttaatcctggcaaattacccttgcaaagtttaatc 39936579  T
Q  213 atttaa 218  Q
    ||||||    
T  39936578 atttaa 39936573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 264
Target Start/End: Original strand, 15848095 - 15848236
Alignment:
Q  124 atatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaat 222  Q
    |||||| |||| |||||| ||||| ||||| | ||||||||||| |||||||||| |||| |||| || ||||||||  |   ||||||||||||| | |    
T  15848095 atatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcatttaaaatt 15848194  T
Q  223 tggtttctcaacctagttaatcactgccacgtcactaatttg 264  Q
    | ||  |||  || | ||||||||||||||||||||||||||    
T  15848195 tcgtccctctccccacttaatcactgccacgtcactaatttg 15848236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 39935451 - 39935557
Alignment:
Q  112 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattgg-tcctgtaatcgttaattctggcaaattacccttttaaattttaa 210  Q
    ||||||||||||||||||||||||||| || ||||| | ||  | |||||||||| || | ||||||||||| ||| ||||||| ||||  ||| |||||    
T  39935451 aaataggctttaatatgtgtttcgtcc-tgcaattaggtgtggtttaaaaattggttcttataatcgttaatcctgacaaattatccttgcaaagtttaa 39935549  T
Q  211 tcatttaa 218  Q
    ||||||||    
T  39935550 tcatttaa 39935557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 15604348 - 15604422
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| || |||||||||| |||| ||||||| ||||||||    
T  15604348 atgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccctt 15604422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 28226161 - 28226087
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| || |||||||||| |||| ||||||| ||||||||    
T  28226161 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccctt 28226087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 39498329 - 39498391
Alignment:
Q  136 tccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccc 197  Q
    |||||||||||| ||||| | ||||||||||| ||||||||||||||| ||||||| ||||||    
T  39498329 tccttgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttaccc 39498391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 114 - 218
Target Start/End: Complemental strand, 25231279 - 25231174
Alignment:
Q  114 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatc 212  Q
    |||||||| ||||||| |||  ||| || ||||| ||||| | ||||||||||||| |||| ||| |||| || |||||||||||||  ||| |||||||    
T  25231279 ataggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaattacccttgcaaactttaatc 25231180  T
Q  213 atttaa 218  Q
    ||||||    
T  25231179 atttaa 25231174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 34447812 - 34447865
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc 169  Q
    |||||| ||||||| |||| |||||||||||| ||||||| |||||||||||||    
T  34447812 aggcttaaatatgtatttcatccttgtaattaggggtcatttaaaaattggtcc 34447865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 111 - 275
Target Start/End: Original strand, 37895341 - 37895506
Alignment:
Q  111 gaaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaatttta 209  Q
    |||| |||||| ||||||| |||| |||||| ||||||||||| | ||||||||||| |||||| ||| |||| || ||||| || ||||  ||   |||    
T  37895341 gaaaaaggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcatta 37895440  T
Q  210 atcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    ||||||||| | ||  |   |  ||| | |||||||||||||||||||||||||| | ||||||||    
T  37895441 atcatttaaaatttcatcctttgaccaacttaatcactgccacgtcactaatttgataacgtggca 37895506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 257
Target Start/End: Original strand, 3652212 - 3652352
Alignment:
Q  118 gctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcattt 216  Q
    ||||||||| |||||| |||| || ||| | || ||||  |||||||||||  | |||||||||||  |||||||||||||||  ||| |||||||||||    
T  3652212 gctttaatacgtgttttgtccctgcaatcagggatcattcaaaaattggtcaatataatcgttaatcatggcaaattacccttgcaaagtttaatcattt 3652311  T
Q  217 aagaattggtttctcaacctagttaatcactgccacgtcac 257  Q
    || | |  |||  ||  ||||||| ||||||||||||||||    
T  3652312 aaaattatgttcgtcttcctagttgatcactgccacgtcac 3652352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 275
Target Start/End: Complemental strand, 10713151 - 10712992
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||| ||||||| |||| |||||| ||||||||||| | |||||||||||  ||||| ||| |||| || |||||||| ||||  ||   |||||||||    
T  10713151 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtttctgtattcgctaatccttgcaaattagccttgcaatcgttaatcatt 10713052  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    ||| |  | ||   |  ||| | |||||||||||||||||||||||||| | ||||||||    
T  10713051 taaaatgtcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggca 10712992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 8710885 - 8710811
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||| |||||||| |||| ||| ||| ||||||||    
T  8710885 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttaccctt 8710811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 11163453 - 11163371
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacc 196  Q
    ||||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||||||| |||||    
T  11163453 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacc 11163371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 41588475 - 41588405
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattac 195  Q
    |||||||||||||||  ||||| | ||||| |||||||| |||| |||||||| |||||||||||| ||||    
T  41588475 atgtgtttcgtccttacaattaggcgtcatttaaaaattagtccctgtaatcgctaattctggcaatttac 41588405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 275
Target Start/End: Original strand, 36382159 - 36382320
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatca 213  Q
    ||||||| | ||||| |||| |||||| ||||| || || | ||||||||||||| | |||||| |||| ||| ||| ||||||||  |   ||||||||    
T  36382159 taggcttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtccctataatcgctaatcctgacaatttacccttgcattgtttaatca 36382258  T
Q  214 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    ||||| | ||  |  |||  || | |||||||||||||||||||||||||| | ||||||||    
T  36382259 tttaaaatttcatccctctccccacttaatcactgccacgtcactaatttgatgacgtggca 36382320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 36382556 - 36382503
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc 169  Q
    |||||| ||||||| |||| |||||| ||||||||||| | |||||||||||||    
T  36382556 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtcc 36382503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 44713801 - 44713846
Alignment:
Q  123 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc 168  Q
    ||||||| |||| |||||||||||||||||| | ||||||||||||    
T  44713801 aatatgtatttcatccttgtaattaagggtcgtttaaaaattggtc 44713846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 1695863 - 1695899
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  1695863 ttaatcactgccacgtcactaatttgatgacgtggca 1695899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 6658152 - 6658116
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  6658152 ttaatcactgccacgtcactaatttgatgacgtggca 6658116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 11163177 - 11163213
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  11163177 ttaatcactgccacgtcactaatttgatgacgtggca 11163213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 13995796 - 13995832
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  13995796 ttaatcactgccacgtcactaatttgatgacgtggca 13995832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 15848393 - 15848357
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  15848393 ttaatcactgccacgtcactaatttgatgacgtggca 15848357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 16099329 - 16099293
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  16099329 ttaatcactgccacgtcactaatttgatgacgtggca 16099293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 25893556 - 25893488
Alignment:
Q  206 tttaatcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggc 274  Q
    ||||||||||||| |||| |||||||  ||   ||||||||||||||||| |||||| ||| |||||||    
T  25893556 tttaatcatttaaaaattcgtttctctccccccttaatcactgccacgtccctaattagctgacgtggc 25893488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 33062173 - 33062209
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  33062173 ttaatcactgccacgtcactaatttgatgacgtggca 33062209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 34448100 - 34448064
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  34448100 ttaatcactgccacgtcactaatttgatgacgtggca 34448064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 4e-30; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 114 - 268
Target Start/End: Original strand, 44522144 - 44522299
Alignment:
Q  114 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatc 212  Q
    |||||||| | |||||||||||||| || ||||| || |||| |||||||||| || ||||||||||||| || |||||||| |||| |||| |||||||    
T  44522144 ataggcttaagtatgtgtttcgtccctgcaattagggatcatttaaaaattggaccctgtaatcgttaatcctagcaaattatccttgtaaagtttaatc 44522243  T
Q  213 atttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgctta 268  Q
    |||||||||||||| | |||||| ||||||||| ||||| |||||| ||| |||||    
T  44522244 atttaagaattggtctttcaacccagttaatcagtgccaagtcactgattagctta 44522299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 117 - 264
Target Start/End: Original strand, 6367562 - 6367710
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||||||| ||||||||  |   ||||||||||    
T  6367562 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 6367661  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcactaatttg 264  Q
    ||| | || ||  |||  || | ||||||||||||||||||||||||||    
T  6367662 taaaatttcgtccctctccccacttaatcactgccacgtcactaatttg 6367710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 5734005 - 5734087
Alignment:
Q  112 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaatta 194  Q
    |||||||||| ||||||| ||||||||||| ||||| ||||| | |||||||||||| |||||||| |||| || ||||||||    
T  5734005 aaataggcttaaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtcatgtaatcgctaatccttgcaaatta 5734087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 195
Target Start/End: Original strand, 35038464 - 35038534
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattac 195  Q
    |||||||||||||||| ||||||||||||| ||||||||| ||| ||||||||||||| || |||||||||    
T  35038464 atgtgtttcgtccttgcaattaagggtcatttaaaaattgatccatgtaatcgttaatcctagcaaattac 35038534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 264
Target Start/End: Complemental strand, 17662279 - 17662130
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    |||||| ||||||| |||| |||||| ||||  ||||| | ||||||||||| ||| ||||||||||| ||||||| ||||||||  |   |||||||||    
T  17662279 aggcttaaatatgtatttcatccttgcaatttggggtcgtttaaaaattggttcctttaatcgttaatcctggcaatttacccttgcattgtttaatcat 17662180  T
Q  215 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 264  Q
    |||| | || ||  |||  || | ||||||||||||||||||||||||||    
T  17662179 ttaaaatttcgtccctcttcccacttaatcactgccacgtcactaatttg 17662130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 277
Target Start/End: Complemental strand, 34850493 - 34850332
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||||| |||| ||| |||| || |||||||||||||  ||| ||||||||||    
T  34850493 ggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatt 34850394  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagt 277  Q
    ||| | ||  |  |||  || | |||||||||||||||||||| ||| ||| ||||||||||    
T  34850393 taaaatttcatccctctccccacttaatcactgccacgtcactgattagctgacgtggcagt 34850332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 19515815 - 19515902
Alignment:
Q  113 aataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 199  Q
    ||||||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||||  |||||||||||||||||| || ||||||||    
T  19515815 aataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtaatcgttaattctggaaatttaccctt 19515902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 32132303 - 32132406
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    ||||||||||||||||||||||| |  |||||  |||||| |||||||| |||| ||||||||||||| || ||||||||| |||  ||| ||||||||     
T  32132303 aggctttaatatgtgtttcgtccctccaattagtggtcatttaaaaattcgtccatgtaatcgttaatccttgcaaattactcttacaaagtttaatcaa 32132402  T
Q  215 ttaa 218  Q
    ||||    
T  32132403 ttaa 32132406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 275
Target Start/End: Original strand, 34464449 - 34464608
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||||| |||||||| ||||  |||||| ||||||||  ||  ||||||||||    
T  34464449 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcatt 34464548  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    ||| | || ||   |  ||| | |||||||||||||||||||||||| | | ||||||||    
T  34464549 taaaatttcgtcatttgaccaacttaatcactgccacgtcactaattcgatgacgtggca 34464608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 115 - 264
Target Start/End: Complemental strand, 34464879 - 34464729
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatca 213  Q
    ||||||| ||||||| |||| |||||| ||||| ||||  | ||||||||||||| |||||||| ||||  |||||| ||||||||  ||  ||||||||    
T  34464879 taggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatca 34464780  T
Q  214 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatttg 264  Q
    ||||| | || ||  |||  || | ||||||||||||| ||||||||||||    
T  34464779 tttaaaattttgtccctctccccacttaatcactgccatgtcactaatttg 34464729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 40714453 - 40714527
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| || ||||||||||||||| ||||||| ||||||||    
T  40714453 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttaccctt 40714527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 199
Target Start/End: Complemental strand, 23209757 - 23209672
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 199  Q
    ||||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||||| |||||||| |||| ||||||| ||||||||    
T  23209757 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttaccctt 23209672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 28325220 - 28325147
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||| ||||| ||||| | ||||| |||||||| ||| |||||||||||||| |||||| ||||||||    
T  28325220 atgtgtttcggccttgcaattaggcgtcatttaaaaattagtcatgtaatcgttaattatggcaatttaccctt 28325147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 275
Target Start/End: Complemental strand, 6367991 - 6367831
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    |||||| ||||||| |||| |||||| ||||||||||| | ||||||||||| |||||| ||| |||| || ||||| || ||||  ||   ||||||||    
T  6367991 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 6367892  T
Q  215 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||| | || ||   |  ||| | |||||||||||||||||||||||||| | ||||||||    
T  6367891 ttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggca 6367831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 264
Target Start/End: Complemental strand, 13914494 - 13914347
Alignment:
Q  118 gctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcattt 216  Q
    |||| ||||||| |||| |||||| |||||  |||  | ||||||||||||| |||||||| |||| ||||||| |||||||| ||   |||||||||||    
T  13914494 gcttaaatatgtatttcatccttgcaattagaggttgtttaaaaattggtccatgtaatcgctaatcctggcaatttacccttgtattgtttaatcattt 13914395  T
Q  217 aagaattggtttctcaacctagttaatcactgccacgtcactaatttg 264  Q
    || | || ||  |||  || | | ||||||||||||||||||||||||    
T  13914394 aaaatttcgtccctctccccactaaatcactgccacgtcactaatttg 13914347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 17188963 - 17189037
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| || |||||||||| |||| ||||||| ||||||||    
T  17188963 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccctt 17189037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 25647883 - 25647965
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccc 197  Q
    |||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| ||||||||||||||| ||||||| ||||||    
T  25647883 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttaccc 25647965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 30326505 - 30326579
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| ||| ||||||||| ||||||||| || ||||||||    
T  30326505 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaattctggtaatttaccctt 30326579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 258
Target Start/End: Original strand, 31197065 - 31197202
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||| ||||||| |||| ||| || ||||| ||||||| |||||||| ||| ||||| |||||||| |||| |||||||||||  |     ||||||||    
T  31197065 ggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaatttgtctctgtattcgttaatcctggaaaattacccttgca-----taatcatt 31197159  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcact 258  Q
    ||| | ||  |  |||| |||||||||||||||||||||||||    
T  31197160 taaaatttcatccctcatcctagttaatcactgccacgtcact 31197202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 218
Target Start/End: Original strand, 34849011 - 34849113
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||||| |||| ||| |||| || |||||||||||||  ||| ||||||||||    
T  34849011 ggcttaaatatgtatttaatccttgcaattaggggtcttttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatt 34849110  T
Q  216 taa 218  Q
    |||    
T  34849111 taa 34849113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 49955764 - 49955690
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||  ||||||||||||| ||||||| ||||||||    
T  49955764 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctggcaatttaccctt 49955690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 8898526 - 8898619
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 218  Q
    |||||||||||||||| ||||| | ||||| |||||||| ||| ||||||||| ||||||||| || |||| ||| ||   |||||||||||||    
T  8898526 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaattctggtaatttactcttgtattgtttaatcatttaa 8898619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 275
Target Start/End: Original strand, 46163036 - 46163189
Alignment:
Q  123 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 221  Q
    ||||||| |||| || ||||||||| ||||| | ||||||||||||| |||||||| |||| ||| ||| ||||||||  |   ||||||||||||| |     
T  46163036 aatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaat 46163135  T
Q  222 ttggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    || || ||||  || | ||||| |||| || |||||||||||| | ||||||||    
T  46163136 ttcgtctctctccccacttaattactgtcatgtcactaatttgatgacgtggca 46163189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 197
Target Start/End: Complemental strand, 47999524 - 47999439
Alignment:
Q  113 aataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccc 197  Q
    ||||||||| ||||||| |||  |||||||||||| ||||| | ||||||||||| |||||||||| ||||  |||||| ||||||    
T  47999524 aataggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttaccc 47999439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 275
Target Start/End: Complemental strand, 37578621 - 37578461
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    |||||| ||||||| |||| |||||| ||||  ||||| | |||||||||||  | ||||||| |||| ||||||| ||||||||  |    ||||||||    
T  37578621 aggcttaaatatgtatttcatccttgcaattgggggtcgtttaaaaattggtttttgtaatcgctaatcctggcaatttacccttacattgattaatcat 37578522  T
Q  215 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||| | || ||  |||  || | |||||||||||||||||||||||||| | ||||||||    
T  37578521 ttaaaatttcgtcactctccccacttaatcactgccacgtcactaatttgatgacgtggca 37578461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 17661851 - 17661926
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaa 191  Q
    |||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||||||||| ||| |||| || |||||    
T  17661851 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcctgtattcgctaatccttgcaaa 17661926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 17691218 - 17691297
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaatta 194  Q
    |||||||||||||| ||||||||||  || || ||||| | ||||||||||| |||||||||| |||| || ||||||||    
T  17691218 aggctttaatatgtatttcgtccttacaagtaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaatta 17691297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 40714860 - 40714789
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacc 196  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||| |||||||| |||| ||||||| |||||    
T  40714860 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacc 40714789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 8898934 - 8898860
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||||||||| | ||||| |||||||| ||| ||||||||  |||| ||| ||| ||||||||    
T  8898934 atgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcactaatactgacaatttaccctt 8898860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 17189268 - 17189194
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| |||||   ||||| |||||||| || |||||||||| |||| ||||||| ||||||||    
T  17189268 atgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccctt 17189194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 20760922 - 20760848
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||  ||||| | ||||| |||||||| ||| ||||||||| |||| ||||||| ||||||||    
T  20760922 atgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttaccctt 20760848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 275
Target Start/End: Original strand, 24905176 - 24905326
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattg 224  Q
    ||||| || ||||||| ||||| | ||||| |||||||| |||| |||||| | |||| || |||| ||| ||||  || | |||||||||||| | |||    
T  24905176 atgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatcatttaaaatttg 24905275  T
Q  225 gtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    ||   |  ||| | |||||||||||||||||||||||||| | ||||||||    
T  24905276 gtccttggaccaacttaatcactgccacgtcactaatttgatgacgtggca 24905326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 35041031 - 35040957
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 199  Q
    ||||||||||||||||||||||   ||||| |||||||| |||| |||||||| |||| ||| ||| ||||||||    
T  35041031 atgtgtttcgtccttgtaattagccgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttaccctt 35040957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 49955356 - 49955430
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| |  |||| |||||||| || |||||||||| |||| ||||||| ||||||||    
T  49955356 atgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttaccctt 49955430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 277
Target Start/End: Original strand, 27998098 - 27998135
Alignment:
Q  240 taatcactgccacgtcactaatttgcttacgtggcagt 277  Q
    ||||||||||||||||||||||||||| || |||||||    
T  27998098 taatcactgccacgtcactaatttgctgacatggcagt 27998135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 218
Target Start/End: Complemental strand, 32133354 - 32133249
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagg-gtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatc 212  Q
    |||||||||||||||||||| | | || ||||| || ||| | |||||||| ||||| ||||||||||||  |||||||||| |||   ||| |||||||    
T  32133354 taggctttaatatgtgtttcattcctgcaattagggagtcctttaaaaattcgtccttgtaatcgttaatcttggcaaattagcctcgcaaagtttaatc 32133255  T
Q  213 atttaa 218  Q
    ||||||    
T  32133254 atttaa 32133249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 35473629 - 35473706
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaa 191  Q
    ||||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||||||||    
T  35473629 taggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaaa 35473706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 41098731 - 41098816
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 199  Q
    ||||||| ||||||| |||| | |||| ||||| ||||| | |||||||||||| ||||||||| |||| ||| ||| ||||||||    
T  41098731 taggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctgacaatttaccctt 41098816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 183344 - 183380
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  183344 ttaatcactgccacgtcactaatttgatgacgtggca 183380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 4716591 - 4716627
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  4716591 ttaatcactgccacgtcactaatttgatgacgtggca 4716627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 4960663 - 4960699
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  4960663 ttaatcactgccacgtcactaatttgatgacgtggca 4960699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 19017752 - 19017788
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  19017752 ttaatcactgccacgtcactaatttgatgacgtggca 19017788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 116 - 199
Target Start/End: Original strand, 26024422 - 26024506
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattaccctt 199  Q
    |||||| ||||||| |||  | |||| ||||| ||||| | |||||||||||| ||||||||| |||| ||||||| ||||||||    
T  26024422 aggcttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttaccctt 26024506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 31514441 - 31514477
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  31514441 ttaatcactgccacgtcactaatttgatgacgtggca 31514477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 33442717 - 33442753
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  33442717 ttaatcactgccacgtcactaatttgatgacgtggca 33442753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 36694277 - 36694333
Alignment:
Q  112 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc 168  Q
    |||||||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||||    
T  36694277 aaataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 36694333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 36710378 - 36710434
Alignment:
Q  112 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc 168  Q
    |||||||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||||    
T  36710378 aaataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 36710434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 40439611 - 40439507
Alignment:
Q  123 aatatgtgtttcgtccttgtaattaa-gggtcatctaaaaattggtcctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 221  Q
    ||||||| |||| |||||| |||||| ||||| | ||||||||| || |||| ||| |||| || ||||| || ||| | ||| ||||||||||||| ||    
T  40439611 aatatgtatttcatccttgcaattaatgggtcgtttaaaaattgatcatgtattcgctaatccttgcaaactaacctctcaaagtttaatcatttaaaaa 40439512  T
Q  222 ttggt 226  Q
    |||||    
T  40439511 ttggt 40439507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 44523441 - 44523405
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  44523441 ttaatcactgccacgtcactaattagctgacgtggca 44523405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 46900029 - 46899977
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc 168  Q
    |||||| ||||||| |||| ||| || ||||||||||||| ||||||||||||    
T  46900029 aggcttaaatatgtatttcatccatgcaattaagggtcatttaaaaattggtc 46899977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 49723031 - 49722995
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  49723031 ttaatcactgccacgtcactaatttgataacgtggca 49722995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 52134342 - 52134306
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  52134342 ttaatcactgccacgtcactaatttgatgacgtggca 52134306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 3e-27; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 114 - 271
Target Start/End: Complemental strand, 28498456 - 28498298
Alignment:
Q  114 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatc 212  Q
    ||||||||||||||||||||||||| || ||||| || |||| ||||||||||||| |||||||| |||| |||||||| ||||||   ||| |||||||    
T  28498456 ataggctttaatatgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcgctaatcctggcaaactaccctcccaaagtttaatc 28498357  T
Q  213 atttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgt 271  Q
    |||||| | |||||  || | || |||||||||||||||||||||| ||| ||| ||||    
T  28498356 atttaaaatttggtccctgagcccagttaatcactgccacgtcactgattagctgacgt 28498298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 117 - 258
Target Start/End: Complemental strand, 15116660 - 15116518
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||||||||||| ||||||||||| ||||| ||||| | |||||||||||||| ||||||| |||| || ||||| || ||||  ||| ||||||||||    
T  15116660 ggctttaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtcctcgtaatcgctaatccttgcaaactagccttgcaaagtttaatcatt 15116561  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcact 258  Q
    ||| |||||||  ||||||| ||||||||  ||||||||||||    
T  15116560 taaaaattggtccctcaacccagttaatcgatgccacgtcact 15116518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 271
Target Start/End: Complemental strand, 29810867 - 29810709
Alignment:
Q  114 ataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatc 212  Q
    ||||||||||||||||||||||||| || ||||| || |||| ||||||||||||| |||||||  ||||  ||||||| ||||||   ||| |||||||    
T  29810867 ataggctttaatatgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcactaatcatggcaaactaccctcccaaagtttaatc 29810768  T
Q  213 atttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgt 271  Q
    |||||| | |||||  || | || |||||||||||||||||||||| ||| ||| ||||    
T  29810767 atttaaaatttggtccctgagcccagttaatcactgccacgtcactgattagctgacgt 29810709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 115 - 258
Target Start/End: Original strand, 26463177 - 26463321
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatca 213  Q
    ||||||| ||||||| |||  ||| || ||||| ||||| | ||||||||||||| |||| |||||||| ||||||||||||||||  ||| ||||||||    
T  26463177 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcctggcaaattacccttgcaaagtttaatca 26463276  T
Q  214 tttaagaattggtttctcaacctagttaatcactgccacgtcact 258  Q
    ||||| | || ||  |||| || ||||||||||||||||||||||    
T  26463277 tttaaaatttcgtccctcatcccagttaatcactgccacgtcact 26463321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 117 - 278
Target Start/End: Original strand, 12407508 - 12407670
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||| ||||||| |||| |||||  |||||||| || | |||||||||||| ||||| ||| |||| || | ||||||| ||   ||| ||||||||||    
T  12407508 ggcttaaatatgtatttcatccttacaattaaggatcgtttaaaaattggtctctgtattcgctaatccttgtaaattactctagcaaagtttaatcatt 12407607  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagtg 278  Q
    ||| | |||||  || |||||||||||| |||||||||||||||||| ||| |||||||||||    
T  12407608 taaaatttggtccctgaacctagttaattactgccacgtcactaattagctcacgtggcagtg 12407670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 24210543 - 24210633
Alignment:
Q  129 tgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 218  Q
    |||||||||| |||||||| ||||||| |||||||||||| ||||||| ||||||  | |||||||||||||  ||| |||||||||||||    
T  24210543 tgtttcgtccctgtaattaggggtcatttaaaaattggtctctgtaattgttaatcatagcaaattacccttgcaaagtttaatcatttaa 24210633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 275
Target Start/End: Original strand, 33517540 - 33517693
Alignment:
Q  123 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 221  Q
    ||||||| |||| |||||||||||| || || | ||||||||||| |||||||||| |||| ||||||| ||||||||  |   ||||||||||||| |     
T  33517540 aatatgtatttcatccttgtaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaat 33517639  T
Q  222 ttggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    || ||  |||  || | ||||||||||| |||||||||||||| | ||||||||    
T  33517640 ttcgtccctctccccacttaatcactgctacgtcactaatttgatgacgtggca 33517693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 119 - 258
Target Start/End: Original strand, 13378527 - 13378667
Alignment:
Q  119 ctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcattta 217  Q
    ||||||||||| |||  ||| || || || ||||||| |||||| ||||||| ||| | |||||| ||||||| || ||||  |||| |||||||| |||    
T  13378527 ctttaatatgtatttactccctgcaaataggggtcatttaaaaaatggtccttgtatttgttaatcctggcaatttgccctcctaaaatttaatcactta 13378626  T
Q  218 agaattggtttctcaacctagttaatcactgccacgtcact 258  Q
    | |||||||  ||||||| ||||||||| ||||||||||||    
T  13378627 aaaattggtccctcaacccagttaatcagtgccacgtcact 13378667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 116 - 275
Target Start/End: Complemental strand, 21628142 - 21627982
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    |||||| ||||||| |||| |||||| ||||| |||||   ||||||||||||| |||||||| |||| ||| ||| ||||||||  |   |||||||||    
T  21628142 aggcttaaatatgtatttcatccttgcaattaggggtcgcttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 21628043  T
Q  215 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||| | || ||  |||  || | |||||||||||||||||||||||||| | ||||||||    
T  21628042 ttaaaattttgtccctctccccacttaatcactgccacgtcactaatttgatgacgtggca 21627982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 139807 - 139872
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaat 182  Q
    |||||||||||||||||| || | |||||||| ||||||| |||||||||||| |||||||||||||    
T  139807 aggctttaatatgtgttttgttcctgtaatta-gggtcatttaaaaattggtcatgtaatcgttaat 139872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 147828 - 147893
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaat 182  Q
    |||||||||||||||||| || | |||||||| ||||||| |||||||||||| |||||||||||||    
T  147828 aggctttaatatgtgttttgttcctgtaatta-gggtcatttaaaaattggtcatgtaatcgttaat 147893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 7905252 - 7905326
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||| ||||||||||||| ||||||| ||||||||    
T  7905252 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgttaatcctggcaatttaccctt 7905326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 117 - 262
Target Start/End: Complemental strand, 26464627 - 26464481
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||| ||||||| |||| ||| || ||||| ||||||| |||||| |||||| |||| | |||||| ||||||| || ||||  ||||  ||||||| |    
T  26464627 ggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaaatggtccctgtatttgttaatcctggcaattttccctcctaaaaattaatcact 26464528  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcactaatt 262  Q
    ||| ||||| |  ||||||||||||||||| |||||| || ||||||    
T  26464527 taaaaattgatccctcaacctagttaatcagtgccacatcgctaatt 26464481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 15913965 - 15913893
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccc 197  Q
    |||||||||||||||| ||||||||||||| |||||||| |||| | |||||||||||  ||| |||||||||    
T  15913965 atgtgtttcgtccttgcaattaagggtcatttaaaaatttgtccatataatcgttaatcttggaaaattaccc 15913893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 3176429 - 3176376
Alignment:
Q  144 attaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattacc 196  Q
    |||| ||||||| |||||||||||| |||||||||||||||||| |||||||||    
T  3176429 attaggggtcatttaaaaattggtcactgtaatcgttaattctgtcaaattacc 3176376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 255
Target Start/End: Complemental strand, 8090357 - 8090216
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatca 213  Q
    ||||||| ||||||| || | |||||| ||||| ||||| | ||||||||||||| |||| ||  |||| || |||||||||||||  ||| ||||||||    
T  8090357 taggcttaaatatgtattacatccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgcaaattacccttgcaaagtttaatca 8090258  T
Q  214 tttaagaattggtttctcaacctagttaatcactgccacgtc 255  Q
    ||||| | |||||  || | || ||||||| | |||||||||    
T  8090257 tttaaaatttggtccctgagcccagttaattattgccacgtc 8090216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 21836041 - 21836114
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattaccctt 199  Q
    ||||||||||| |||| ||||| | ||||| |||||||| ||| |||||||| |||| ||||||| ||||||||    
T  21836041 atgtgtttcgttcttgcaattaggcgtcatttaaaaattagtcttgtaatcgctaatcctggcaatttaccctt 21836114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 30337447 - 30337532
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattaccctt 199  Q
    ||||||| ||||||| |||  |||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||||||| ||||||||    
T  30337447 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccctt 30337532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 141162 - 141066
Alignment:
Q  123 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 218  Q
    ||||||||||||||||||| |||||   || || |||||||| || ||||||||||||||| || ||||||||| |||  |||  ||||||||||||    
T  141162 aatatgtgtttcgtccttgcaattagatgttatttaaaaatttgttcctgtaatcgttaatccttgcaaattactcttgcaaaaattaatcatttaa 141066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 149183 - 149087
Alignment:
Q  123 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatttaa 218  Q
    ||||||||||||||||||| |||||   || || |||||||| || ||||||||||||||| || ||||||||| |||  |||  ||||||||||||    
T  149183 aatatgtgtttcgtccttgcaattagatgttatttaaaaatttgttcctgtaatcgttaatccttgcaaattactcttgcaaaaattaatcatttaa 149087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 275
Target Start/End: Complemental strand, 33517963 - 33517803
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    |||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||||| |||| ||| |||| || ||||| || ||||  ||   ||||||||    
T  33517963 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatcat 33517864  T
Q  215 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||| | || ||   |  ||| | |||||||||||||||||||||||||| | ||||||||    
T  33517863 ttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggca 33517803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 262
Target Start/End: Complemental strand, 30726192 - 30726041
Alignment:
Q  112 aaataggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaa 210  Q
    |||||||||| ||||||| |||| |||||| ||||| ||||| | ||||||||||| |||||| ||| |||| || ||||| || ||||  ||   ||||    
T  30726192 aaataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgaaatcattaa 30726093  T
Q  211 tcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatt 262  Q
    |||||||| | || ||   |  ||| | ||||||||||||||||||||||||    
T  30726092 tcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 30726041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 195
Target Start/End: Original strand, 7160813 - 7160883
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtc-ctgtaatcgttaattctggcaaattac 195  Q
    |||||||||||||||| ||||| | ||||| |||||||| ||| ||||||||| |||| ||||||| ||||    
T  7160813 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttac 7160883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 7905660 - 7905586
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| || ||||| |||| | |||||| |||||||||||| ||||||||    
T  7905660 atgtgtttcgtccttgcaattaggtgtcatttataaatttgtccctataatcgctaattctggcaatttaccctt 7905586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 218
Target Start/End: Original strand, 15115339 - 15115441
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||| ||||||| |||| |||||| |||||  | || | ||||||||||||| | ||||||||||| || |||||||| ||||  ||| ||||||||||    
T  15115339 ggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggtccctataatcgttaatccttgcaaattagccttgcaaagtttaatcatt 15115438  T
Q  216 taa 218  Q
    |||    
T  15115439 taa 15115441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 22502783 - 22502857
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||| |||||||| |||| ||| ||| ||||||||    
T  22502783 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttaccctt 22502857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 22503191 - 22503117
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 199  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||| |||||||| |||| ||||||| ||| ||||    
T  22503191 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttatcctt 22503117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 31406887 - 31406949
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctgg 187  Q
    |||||||||||||||| ||||| | ||||| |||||||| || ||||||||||||||| ||||    
T  31406887 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctgg 31406949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 33647053 - 33647122
Alignment:
Q  206 tttaatcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    ||||||||||||| | || || ||||  || | |||||||||||||||||||||||||| | ||||||||    
T  33647053 tttaatcatttaaaatttcgtctctctccccatttaatcactgccacgtcactaatttgatgacgtggca 33647122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 116 - 199
Target Start/End: Original strand, 8089442 - 8089526
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattaccctt 199  Q
    |||||| ||||||| || | ||| || ||||| ||||| | ||||||||||||| | ||||||||||| || |||||||||||||    
T  8089442 aggcttaaatatgtattacctccctgcaattaggggtcgtttaaaaattggtccctataatcgttaatccttgcaaattaccctt 8089526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 17734319 - 17734355
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  17734319 ttaatcactgccacgtcactaatttgatgacgtggca 17734355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 28000508 - 28000544
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  28000508 ttaatcactgccacgtcactaatttgatgacgtggca 28000544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 30804166 - 30804130
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  30804166 ttaatcactgccacgtcactaatttgatgacgtggca 30804130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 117 - 277
Target Start/End: Complemental strand, 239979 - 239818
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    |||||| |||||||||||||||||| | ||| ||||||| ||||||||||| |||||||||| |||| ||||||||||||||||  ||| ||||||||||    
T  239979 ggcttttatatgtgtttcgtccttgcacttaggggtcatttaaaaattggttcctgtaatcgataatcctggcaaattacccttccaaagtttaatcatt 239880  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggcagt 277  Q
    ||| | || ||  ||  ||| | ||||| |||||||| ||||| ||| ||| ||||||||||    
T  239879 taaaatttcgtccctacacccacttaattactgccacatcactgattagctgacgtggcagt 239818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 115 - 274
Target Start/End: Original strand, 23229 - 23389
Alignment:
Q  115 taggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatca 213  Q
    |||||||| ||||||||||||||| || || || | ||||| ||||||||||||  |||| | |||||| ||| |||  || ||||  ||| ||||||||    
T  23229 taggctttgatatgtgtttcgtccctgcaaatatgagtcatttaaaaattggtctatgtatttgttaatcctgtcaatctatccttccaaagtttaatca 23328  T
Q  214 tttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggc 274  Q
    ||||| | ||||||||||  || | |||||||||||||||||| ||||||||| |||||||    
T  23329 tttaaaatttggtttctccccccacttaatcactgccacgtcagtaatttgctgacgtggc 23389  T

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Target: scaffold0220; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 273
Target Start/End: Complemental strand, 24775 - 24617
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctg-taatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    |||||||||||||| |||| ||| || |  || ||||||| ||||||||||||||  || | |||||| |||||||  || |||   ||| |||||||||    
T  24775 aggctttaatatgtttttcatccctgcatataggggtcatttaaaaattggtccttatatttgttaatcctggcaatctatcctccaaaagtttaatcat 24676  T
Q  215 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtgg 273  Q
    |||| | || || ||| | || ||||||| |||||||||||||| ||| ||| ||||||    
T  24675 ttaaaattttgtctctgagcccagttaattactgccacgtcactgattagctgacgtgg 24617  T

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Target: scaffold0031 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 117 - 264
Target Start/End: Original strand, 68965 - 69113
Alignment:
Q  117 ggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacccttttaaattttaatcatt 215  Q
    ||||| ||||||| |||| |||||| ||||| ||||||| ||||||||||| |||||||||  |||| ||||||| ||||||||  |   ||||||||||    
T  68965 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccttgcattgtttaatcatt 69064  T
Q  216 taagaattggtttctcaacctagttaatcactgccacgtcactaatttg 264  Q
    ||| | || ||  |||  || | ||||||||||||||||||||||||||    
T  69065 taaaatttcgtccctctccccacttaatcactgccacgtcactaatttg 69113  T

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Target: scaffold0388 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 12656 - 12525
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattg 224  Q
    |||||||||||||||| ||||| | ||||| |||||||| |||| ||||||||||||| ||||||| ||||||||  |   ||||||||||||| | ||     
T  12656 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 12557  T
Q  225 gtttctcaacctagttaatcactgccacgtca 256  Q
    |||  |  ||||| ||||||||||||||||||    
T  12556 gttctttgacctacttaatcactgccacgtca 12525  T

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Target: scaffold0775 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 123 - 256
Target Start/End: Complemental strand, 6400 - 6266
Alignment:
Q  123 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaa 221  Q
    |||||||||||| |||||| ||||| ||||||  ||||||||||||| | |||||| |||| || |||||||||||||  ||  ||||||||||||| |     
T  6400 aatatgtgtttcttccttgaaattaggggtcacttaaaaattggtccttataatcgataatccttgcaaattacccttgcaatgtttaatcatttaaaat 6301  T
Q  222 ttggtttctcaacctagttaatcactgccacgtca 256  Q
    || ||| || |||| | ||||| ||||||||||||    
T  6300 ttcgttccttaacccacttaatgactgccacgtca 6266  T

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Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 116 - 275
Target Start/End: Complemental strand, 37992 - 37832
Alignment:
Q  116 aggctttaatatgtgtttcgtccttgtaattaagggtcatctaaaaattggtcct-gtaatcgttaattctggcaaattacccttttaaattttaatcat 214  Q
    |||||| ||||||| |||| |||||| ||||| | ||| | |||||||||||| | ||||||| |||| ||| ||| |||||||| ||   |||||||||    
T  37992 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatcat 37893  T
Q  215 ttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||| | || ||  |||  || | |||||||||||||||||||||||||| | ||||||||    
T  37892 ttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtggca 37832  T

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Target: scaffold0328 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 256
Target Start/End: Complemental strand, 11557 - 11426
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcc-tgtaatcgttaattctggcaaattacccttttaaattttaatcatttaagaattg 224  Q
    ||||||||| |||||| ||||| | ||||| |||||||| |||| ||||||||||||| ||||||| ||||||||  |   ||||||||||||| | ||     
T  11557 atgtgtttcatccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 11458  T
Q  225 gtttctcaacctagttaatcactgccacgtca 256  Q
    || | |  ||| | ||||||||||||||||||    
T  11457 gtcttttgaccaacttaatcactgccacgtca 11426  T

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Target: scaffold0182 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 272
Target Start/End: Original strand, 31714 - 31780
Alignment:
Q  206 tttaatcatttaagaattggtttctcaacctagttaatcactgccacgtcactaatttgcttacgtg 272  Q
    |||||||| |||| ||||||| |||||||| ||||||||| |||||||||||| ||| ||| |||||    
T  31714 tttaatcacttaaaaattggtctctcaacccagttaatcaatgccacgtcactgattagctgacgtg 31780  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 221800 - 221873
Alignment:
Q  126 atgtgtttcgtccttgtaattaagggtcatctaaaaattggtcctgtaatcgttaattctggcaaattaccctt 199  Q
    ||||||||||| |||| ||||| | ||||| |||||||| ||| |||||||| |||| ||||||| ||||||||    
T  221800 atgtgtttcgttcttgcaattaggcgtcatttaaaaattagtcttgtaatcgctaatcctggcaatttaccctt 221873  T

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Target: scaffold0128 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 196
Target Start/End: Original strand, 19863 - 19937
Alignment:
Q  123 aatatgtgtttcgtccttgtaattaagggtcatctaaaaattggt-cctgtaatcgttaattctggcaaattacc 196  Q
    ||||||| ||||||||||| ||||| ||||| | ||||||||||| ||||| |||| |||| || ||||||||||    
T  19863 aatatgtatttcgtccttgcaattatgggtcgtttaaaaattggtccctgtgatcgctaatccttgcaaattacc 19937  T

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Target: scaffold0559 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 1507 - 1471
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  1507 ttaatcactgccacgtcactaatttgatgacgtggca 1471  T

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Target: scaffold0075 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 14552 - 14588
Alignment:
Q  239 ttaatcactgccacgtcactaatttgcttacgtggca 275  Q
    |||||||||||||||||||||||||| | ||||||||    
T  14552 ttaatcactgccacgtcactaatttgatgacgtggca 14588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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