View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14253_low_9 (Length: 307)

Name: NF14253_low_9
Description: NF14253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14253_low_9
NF14253_low_9
[»] chr4 (27 HSPs)
chr4 (4-291)||(43719214-43719501)
chr4 (4-54)||(52983617-52983667)
chr4 (4-53)||(32942369-32942418)
chr4 (5-56)||(34835525-34835576)
chr4 (4-54)||(20566347-20566397)
chr4 (4-54)||(25852212-25852262)
chr4 (4-54)||(32986195-32986245)
chr4 (4-54)||(34844907-34844957)
chr4 (5-59)||(41621746-41621800)
chr4 (4-54)||(46714390-46714440)
chr4 (4-54)||(54127491-54127541)
chr4 (5-54)||(40059002-40059051)
chr4 (6-53)||(9646367-9646414)
chr4 (4-59)||(19660681-19660736)
chr4 (4-59)||(33696428-33696483)
chr4 (4-54)||(1985834-1985884)
chr4 (63-113)||(3652754-3652804)
chr4 (8-54)||(5609355-5609401)
chr4 (4-54)||(33992624-33992674)
chr4 (5-51)||(43352474-43352520)
chr4 (9-55)||(45302836-45302882)
chr4 (4-58)||(51535607-51535661)
chr4 (4-53)||(34722169-34722218)
chr4 (5-58)||(42245740-42245793)
chr4 (6-54)||(13873446-13873494)
chr4 (4-48)||(35229172-35229216)
chr4 (4-52)||(55961891-55961939)
[»] chr8 (27 HSPs)
chr8 (5-54)||(28964035-28964084)
chr8 (4-54)||(15259555-15259605)
chr8 (4-54)||(27746484-27746534)
chr8 (4-54)||(2618188-2618238)
chr8 (4-54)||(3734772-3734822)
chr8 (4-54)||(8042656-8042706)
chr8 (4-54)||(18532109-18532159)
chr8 (4-54)||(19471611-19471661)
chr8 (4-54)||(19542535-19542585)
chr8 (4-54)||(19590111-19590161)
chr8 (4-54)||(34237804-34237854)
chr8 (6-59)||(4718642-4718695)
chr8 (4-53)||(28193477-28193526)
chr8 (5-54)||(34694726-34694775)
chr8 (4-60)||(20305904-20305960)
chr8 (4-60)||(21092537-21092593)
chr8 (5-53)||(30911407-30911455)
chr8 (4-60)||(42643267-42643323)
chr8 (4-39)||(9047427-9047462)
chr8 (8-58)||(5202243-5202293)
chr8 (5-55)||(28908822-28908872)
chr8 (4-54)||(39349258-39349308)
chr8 (9-46)||(11714973-11715010)
chr8 (4-53)||(24018385-24018434)
chr8 (5-54)||(34639356-34639405)
chr8 (14-62)||(11956215-11956263)
chr8 (6-54)||(27775186-27775234)
[»] chr5 (27 HSPs)
chr5 (6-59)||(21042676-21042729)
chr5 (4-59)||(11926651-11926706)
chr5 (4-59)||(13038603-13038658)
chr5 (8-58)||(42006787-42006837)
chr5 (4-53)||(3715058-3715107)
chr5 (4-53)||(37397712-37397761)
chr5 (4-60)||(32059589-32059645)
chr5 (4-59)||(1827679-1827734)
chr5 (4-59)||(13108598-13108653)
chr5 (4-54)||(4603775-4603825)
chr5 (4-54)||(8484810-8484860)
chr5 (4-54)||(22392699-22392749)
chr5 (4-54)||(25586930-25586980)
chr5 (4-54)||(38631110-38631160)
chr5 (63-103)||(9818883-9818923)
chr5 (4-60)||(15641254-15641310)
chr5 (4-59)||(11465056-11465111)
chr5 (8-54)||(23270675-23270721)
chr5 (4-54)||(25750760-25750810)
chr5 (4-54)||(31288095-31288145)
chr5 (4-54)||(34049820-34049870)
chr5 (5-54)||(12317300-12317349)
chr5 (5-54)||(22253295-22253344)
chr5 (5-54)||(36954816-36954865)
chr5 (9-58)||(38086469-38086518)
chr5 (4-48)||(33709650-33709694)
chr5 (4-40)||(37495059-37495095)
[»] chr7 (32 HSPs)
chr7 (4-59)||(10091185-10091240)
chr7 (4-58)||(13332572-13332626)
chr7 (4-54)||(28089818-28089868)
chr7 (5-54)||(31713045-31713094)
chr7 (4-59)||(17197099-17197154)
chr7 (4-59)||(18044104-18044159)
chr7 (4-55)||(28003837-28003888)
chr7 (4-54)||(2103057-2103107)
chr7 (4-54)||(2344301-2344351)
chr7 (4-54)||(2751273-2751323)
chr7 (4-54)||(7176011-7176061)
chr7 (4-54)||(7275279-7275329)
chr7 (4-54)||(21217982-21218032)
chr7 (4-54)||(22119890-22119940)
chr7 (4-54)||(23854398-23854448)
chr7 (8-54)||(31197593-31197639)
chr7 (4-54)||(40543059-40543109)
chr7 (5-54)||(40332101-40332150)
chr7 (6-54)||(8435846-8435894)
chr7 (6-54)||(21370599-21370647)
chr7 (5-53)||(27312155-27312203)
chr7 (4-54)||(7799981-7800031)
chr7 (4-54)||(17212055-17212105)
chr7 (8-54)||(22638294-22638340)
chr7 (5-59)||(22696317-22696371)
chr7 (5-57)||(3950938-3950991)
chr7 (5-57)||(3951140-3951193)
chr7 (5-54)||(11997851-11997900)
chr7 (5-54)||(21574253-21574302)
chr7 (6-55)||(27704003-27704052)
chr7 (63-96)||(40491741-40491774)
chr7 (5-53)||(37056217-37056265)
[»] chr3 (31 HSPs)
chr3 (4-59)||(40940818-40940873)
chr3 (9-59)||(4462626-4462676)
chr3 (4-54)||(9842919-9842969)
chr3 (4-54)||(25289863-25289913)
chr3 (4-53)||(11390601-11390650)
chr3 (5-54)||(50582990-50583039)
chr3 (4-60)||(30807302-30807358)
chr3 (4-59)||(35492904-35492959)
chr3 (4-59)||(46576341-46576396)
chr3 (4-54)||(30257622-30257672)
chr3 (4-54)||(34492724-34492774)
chr3 (4-54)||(45529903-45529953)
chr3 (4-54)||(53424325-53424375)
chr3 (5-54)||(4252546-4252595)
chr3 (4-45)||(14343437-14343478)
chr3 (4-53)||(25379760-25379809)
chr3 (4-48)||(15566648-15566692)
chr3 (4-59)||(21362936-21362991)
chr3 (4-59)||(45272565-45272620)
chr3 (4-54)||(7470364-7470414)
chr3 (4-54)||(8456299-8456349)
chr3 (8-54)||(18177040-18177086)
chr3 (5-62)||(26158808-26158865)
chr3 (4-54)||(31537987-31538037)
chr3 (4-54)||(40133598-40133648)
chr3 (4-54)||(48977386-48977436)
chr3 (4-54)||(52455798-52455848)
chr3 (4-45)||(9853623-9853664)
chr3 (5-54)||(16140295-16140344)
chr3 (9-58)||(27887422-27887471)
chr3 (5-54)||(36660768-36660817)
[»] chr2 (15 HSPs)
chr2 (4-59)||(11941359-11941414)
chr2 (4-58)||(17324760-17324814)
chr2 (4-54)||(44946202-44946252)
chr2 (4-54)||(18976574-18976624)
chr2 (4-60)||(44976303-44976359)
chr2 (4-59)||(6714430-6714485)
chr2 (4-59)||(41313985-41314040)
chr2 (4-54)||(19054023-19054073)
chr2 (4-38)||(19849847-19849881)
chr2 (5-59)||(30466980-30467034)
chr2 (4-54)||(33827722-33827772)
chr2 (5-54)||(8192501-8192550)
chr2 (5-54)||(25293164-25293213)
chr2 (4-53)||(41329842-41329891)
chr2 (5-53)||(38784329-38784377)
[»] chr1 (22 HSPs)
chr1 (4-59)||(27455015-27455070)
chr1 (4-53)||(46113551-46113600)
chr1 (4-59)||(8077640-8077695)
chr1 (4-59)||(24674386-24674441)
chr1 (5-60)||(37349515-37349570)
chr1 (7-54)||(47091688-47091735)
chr1 (4-54)||(4621386-4621436)
chr1 (4-54)||(7197395-7197445)
chr1 (4-54)||(29057486-29057536)
chr1 (16-62)||(31162740-31162786)
chr1 (4-54)||(34778340-34778390)
chr1 (4-59)||(24122016-24122071)
chr1 (5-59)||(1138572-1138626)
chr1 (4-58)||(1378739-1378793)
chr1 (6-48)||(6776148-6776190)
chr1 (4-54)||(15059551-15059601)
chr1 (4-54)||(20487339-20487389)
chr1 (4-54)||(30677174-30677224)
chr1 (4-54)||(46607808-46607858)
chr1 (8-54)||(52135128-52135174)
chr1 (5-54)||(32729543-32729592)
chr1 (14-58)||(1095154-1095198)
[»] scaffold0199 (1 HSPs)
scaffold0199 (4-62)||(8556-8614)
[»] chr6 (17 HSPs)
chr6 (4-62)||(22576057-22576115)
chr6 (5-54)||(9843936-9843985)
chr6 (5-61)||(9208243-9208299)
chr6 (4-59)||(11007158-11007213)
chr6 (4-54)||(9238973-9239023)
chr6 (4-54)||(12591635-12591685)
chr6 (4-54)||(15360247-15360297)
chr6 (5-59)||(28672060-28672114)
chr6 (59-100)||(14391042-14391083)
chr6 (4-52)||(11448871-11448919)
chr6 (5-60)||(33499466-33499521)
chr6 (8-59)||(34147339-34147390)
chr6 (8-59)||(34159955-34160006)
chr6 (5-59)||(3222784-3222838)
chr6 (4-54)||(13753238-13753288)
chr6 (4-54)||(21982469-21982519)
chr6 (12-54)||(33718615-33718657)
[»] scaffold0028 (1 HSPs)
scaffold0028 (5-54)||(27774-27823)
[»] scaffold0623 (1 HSPs)
scaffold0623 (4-55)||(1205-1256)
[»] scaffold0459 (1 HSPs)
scaffold0459 (4-55)||(10842-10893)
[»] scaffold0366 (2 HSPs)
scaffold0366 (4-55)||(9448-9499)
scaffold0366 (4-55)||(12149-12200)
[»] scaffold0576 (1 HSPs)
scaffold0576 (4-54)||(5231-5281)
[»] scaffold0049 (1 HSPs)
scaffold0049 (4-54)||(66760-66810)
[»] scaffold0068 (1 HSPs)
scaffold0068 (4-59)||(41793-41848)
[»] scaffold0460 (1 HSPs)
scaffold0460 (4-54)||(8328-8378)
[»] scaffold0328 (1 HSPs)
scaffold0328 (4-54)||(14989-15039)
[»] scaffold0051 (1 HSPs)
scaffold0051 (4-54)||(53020-53070)
[»] scaffold0026 (1 HSPs)
scaffold0026 (4-54)||(97515-97565)
[»] scaffold0217 (1 HSPs)
scaffold0217 (4-53)||(7458-7507)
[»] scaffold0070 (1 HSPs)
scaffold0070 (6-54)||(40323-40371)


Alignment Details
Target: chr4 (Bit Score: 268; Significance: 1e-149; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 4 - 291
Target Start/End: Original strand, 43719214 - 43719501
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagttatttaaaatcaattcttgttaccgcagaaccaaacatacacttaa 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  43719214 ggaggagcaaactccaagatctcaaaccaaccactagaccaaccccaaatgaattatttaaaatcaattcttattaccgcataaccaaacatacacttaa 43719313  T
Q  104 tggattgactcaaaaacttgaatccttccaaactaaattctaaacacagtacttgttgcggagttacttgaataataactagataaatcatgttcgatgg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43719314 tggattgactcaaaaacttgaatccttccaaactaaattctaaacacagtacttgttgcggagttacttgaataataactagataaatcatgttcgatgg 43719413  T
Q  204 tgattttccatgtgttggttgaatatgagaaaacattgctgtcaggttgaaatttggattggtgataccaaaggaattttgctcattt 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  43719414 tgattttccatgtgttggttgaatatgagaaaacattgctgtcaggttgaaatttggattggtgataccataggaattttgctcattt 43719501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 52983667 - 52983617
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||||||||    
T  52983667 ggaggagcaaactccaagatctcaagccaaccactaggccaaccccaaatg 52983617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 32942418 - 32942369
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaat 53  Q
    ||||||| ||||||||||||||||| |||| |||||||||||||||||||    
T  32942418 ggaggagtaaactccaagatctcaagccaaccactagaccaaccccaaat 32942369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 34835576 - 34835525
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgag 56  Q
    ||||||||||||| |||||| ||| |||| ||||||||||||||||||||||    
T  34835576 gaggagcaaactctaagatcccaagccaaccactagaccaaccccaaatgag 34835525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 20566397 - 20566347
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  20566397 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 20566347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 25852262 - 25852212
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  25852262 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 25852212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 32986245 - 32986195
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  32986245 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 32986195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 34844907 - 34844957
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||||||| | || |||||| |||||||||||||    
T  34844907 ggaggagcaaactccaagatctcaagcaaaccactaggccaaccccaaatg 34844957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 41621746 - 41621800
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    |||||||||||||||||||||||| |||| || ||| ||||||||||||| ||||    
T  41621746 gaggagcaaactccaagatctcaagccaaccattaggccaaccccaaatgggtta 41621800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 46714440 - 46714390
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  46714440 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 46714390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 54127491 - 54127541
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  54127491 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 54127541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 40059002 - 40059051
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  40059002 gaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 40059051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 9646367 - 9646414
Alignment:
Q  6 aggagcaaactccaagatctcaaaccaagcactagaccaaccccaaat 53  Q
    ||||||| |||| |||||| |||||||| |||||||||||||||||||    
T  9646367 aggagcacactcaaagatcccaaaccaaccactagaccaaccccaaat 9646414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 19660681 - 19660736
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||| ||||||| ||||    
T  19660681 ggaggagcaaactccaagatcccaagccaaccactaggccaactccaaatgggtta 19660736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 33696428 - 33696483
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||||| ||||| ||||    
T  33696428 ggaggagcaaactccaagatcccaagccaaccactaggccaaccctaaatgggtta 33696483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 1985884 - 1985834
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||| ||||||||    
T  1985884 ggaggagcaaactccaagatcccaagccaaccactaggccaatcccaaatg 1985834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 3652754 - 3652804
Alignment:
Q  63 aaaatcaattcttgttaccgcagaaccaaacatacacttaatggattgact 113  Q
    |||||||||| || | |||||||||||||||| |||||||||||| |||||    
T  3652754 aaaatcaatttttatcaccgcagaaccaaacacacacttaatggactgact 3652804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 5609355 - 5609401
Alignment:
Q  8 gagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  5609355 gagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 5609401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 33992674 - 33992624
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| |||||||| ||||||  |||||| |||||    
T  33992674 ggaggagcaaactccaagatcccaaaccaaccactaggtcaaccctaaatg 33992624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 43352474 - 43352520
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaa 51  Q
    ||||||||||||||| |||||||| |||| || ||||||||||||||    
T  43352474 gaggagcaaactccatgatctcaagccaaccattagaccaaccccaa 43352520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 45302882 - 45302836
Alignment:
Q  9 agcaaactccaagatctcaaaccaagcactagaccaaccccaaatga 55  Q
    ||||||||||||||||||||||||| || ||||| ||| ||||||||    
T  45302882 agcaaactccaagatctcaaaccaaccattagacaaacaccaaatga 45302836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 51535661 - 51535607
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtt 58  Q
    ||||||||||||||||||||| |||  ||| |||||| ||||||| |||||||||    
T  51535661 ggaggagcaaactccaagatcccaagtcaaccactaggccaaccctaaatgagtt 51535607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 34722218 - 34722169
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaat 53  Q
    ||||||||||||||||||||| ||| |||| |||||  ||||||||||||    
T  34722218 ggaggagcaaactccaagatcccaagccaaccactaagccaaccccaaat 34722169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 42245793 - 42245740
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtt 58  Q
    ||||||||||||| |||||| |||  ||| |||||| |||||||||||||||||    
T  42245793 gaggagcaaactctaagatcccaagtcaaccactaggccaaccccaaatgagtt 42245740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 13873446 - 13873494
Alignment:
Q  6 aggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||| ||| | || |||||| |||||||||||||    
T  13873446 aggagcaaactccaagatcccaagcaaaccactaggccaaccccaaatg 13873494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 35229216 - 35229172
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccc 48  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||    
T  35229216 ggaggagcaaactccaagatcccaagccaaccactaggccaaccc 35229172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 55961891 - 55961939
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaa 52  Q
    ||||||||||||||||||||| ||| |||| |||||| |||| ||||||    
T  55961891 ggaggagcaaactccaagatcccaagccaaccactaggccaatcccaaa 55961939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 28964084 - 28964035
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  28964084 gaggagcaaactctaagatctcaaaccaaccactagaccaaccccaaatg 28964035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 15259555 - 15259605
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  15259555 ggaggagcaaaatccaagatcccaaaccaaccactagaccaaccccaaatg 15259605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 27746484 - 27746534
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| |||||||| |||||| |||||||||||||    
T  27746484 ggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatg 27746534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 2618238 - 2618188
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  2618238 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 2618188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 3734772 - 3734822
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  3734772 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 3734822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 8042706 - 8042656
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||||||||||  ||||||||||||    
T  8042706 ggaggagcaaactccaagatcccaagccaagcactaggtcaaccccaaatg 8042656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 18532159 - 18532109
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  18532159 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 18532109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 19471661 - 19471611
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  19471661 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 19471611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 19542585 - 19542535
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  19542585 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 19542535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 19590111 - 19590161
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  19590111 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 19590161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 34237804 - 34237854
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  34237804 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 34237854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 4718695 - 4718642
Alignment:
Q  6 aggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||| ||| |||| |||||| ||||||||||||| ||||    
T  4718695 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtta 4718642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 28193526 - 28193477
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaat 53  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||||||||||    
T  28193526 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 28193477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 34694726 - 34694775
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||||||||||||||| |||  ||| ||||||||||||||||||||    
T  34694726 gaggagcaaactccaagatcacaagtcaaccactagaccaaccccaaatg 34694775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 20305960 - 20305904
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagttat 60  Q
    |||||||||||||| |||||| ||| |||| |||||| ||||||||||||| |||||    
T  20305960 ggaggagcaaactctaagatcccaagccaaccactaggccaaccccaaatgggttat 20305904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 21092593 - 21092537
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagttat 60  Q
    |||||||||||||| |||||| ||| |||| |||||| ||||||||||||| |||||    
T  21092593 ggaggagcaaactctaagatcccaagccaaccactaggccaaccccaaatgggttat 21092537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 30911407 - 30911455
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaat 53  Q
    ||||||||||||||||||||||||| ||| || ||| ||||||||||||    
T  30911407 gaggagcaaactccaagatctcaaatcaatcattaggccaaccccaaat 30911455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 42643267 - 42643323
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagttat 60  Q
    ||||||||||||||||||||| |||  ||| |||||| ||||||||||||| |||||    
T  42643267 ggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggttat 42643323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 9047427 - 9047462
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcacta 39  Q
    |||||||||||||||||||||||||||||| |||||    
T  9047427 ggaggagcaaactccaagatctcaaaccaaccacta 9047462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 5202243 - 5202293
Alignment:
Q  8 gagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtt 58  Q
    ||||||||| |||||||| |||||||  | |||||||||||||||||||||    
T  5202243 gagcaaacttcaagatcttaaaccaactattagaccaaccccaaatgagtt 5202293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 28908872 - 28908822
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatga 55  Q
    |||||||||||||||| ||  |||||||| |||||||||||| ||||||||    
T  28908872 gaggagcaaactccaaaattccaaaccaaccactagaccaactccaaatga 28908822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 39349308 - 39349258
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||| | |||||||||||||    
T  39349308 ggaggagcaaactccaagatcccaagccaaccactgggccaaccccaaatg 39349258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 11714973 - 11715010
Alignment:
Q  9 agcaaactccaagatctcaaaccaagcactagaccaac 46  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  11714973 agcaaactccaagatctcaaaccaaccactaggccaac 11715010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 24018434 - 24018385
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaat 53  Q
    ||||||||||||||||||||| |||  ||| ||||||| |||||||||||    
T  24018434 ggaggagcaaactccaagatcccaagtcaaccactagatcaaccccaaat 24018385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 34639356 - 34639405
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||| ||||||||||| ||| |||| |||||||| |||||||||||    
T  34639356 gaggagcacactccaagatcccaagccaaccactagactaaccccaaatg 34639405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 11956215 - 11956263
Alignment:
Q  14 actccaagatctcaaaccaagcactagaccaaccccaaatgagttattt 62  Q
    |||| ||||||||||| ||| |||||||||||||  |||||||||||||    
T  11956215 actctaagatctcaaatcaaccactagaccaaccttaaatgagttattt 11956263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 27775234 - 27775186
Alignment:
Q  6 aggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||| ||||||| |||||||| ||| || |||||||||||||||||    
T  27775234 aggagcatactccaaaatctcaaagcaatcaatagaccaaccccaaatg 27775186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 21042676 - 21042729
Alignment:
Q  6 aggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||| |||||||| ||||| |||||||||||||||||||    
T  21042676 aggagcaaactccaagatcccaaaccaatcactaaaccaaccccaaatgagtta 21042729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 11926651 - 11926706
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||| |||||||| |||||| ||||||||||||| ||||    
T  11926651 ggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtta 11926706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 13038603 - 13038658
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||| |||||||| |||||| ||||||||||||| ||||    
T  13038603 ggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtta 13038658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 42006837 - 42006787
Alignment:
Q  8 gagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtt 58  Q
    ||||||||||||||||||||| |||| |||||| |||||||||||||||||    
T  42006837 gagcaaactccaagatctcaagccaaccactagcccaaccccaaatgagtt 42006787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 3715058 - 3715107
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaat 53  Q
    ||||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  3715058 ggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaat 3715107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 37397761 - 37397712
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaat 53  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||||||    
T  37397761 ggaggagcaaactccaagatcacaagccaaccactagaccaaccccaaat 37397712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 32059589 - 32059645
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagttat 60  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||||||||||| |||||    
T  32059589 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttat 32059645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 1827679 - 1827734
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||||||| |||| ||||||  |||||||||||| ||||    
T  1827679 ggaggagcaaactccaagatctcaagccaaccactaggtcaaccccaaatgggtta 1827734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 13108598 - 13108653
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||||||||||| ||||    
T  13108598 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtta 13108653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 4603825 - 4603775
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  4603825 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 4603775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 8484810 - 8484860
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  8484810 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 8484860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 22392749 - 22392699
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  22392749 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 22392699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 25586980 - 25586930
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  25586980 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 25586930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 38631110 - 38631160
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  38631110 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 38631160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 9818883 - 9818923
Alignment:
Q  63 aaaatcaattcttgttaccgcagaaccaaacatacacttaa 103  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  9818883 aaaataaattcttgtcaccgcagaaccaaacatacacttaa 9818923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 15641254 - 15641310
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagttat 60  Q
    ||||||||||||||||||||| ||| |||| |||||| | ||||||||||| |||||    
T  15641254 ggaggagcaaactccaagatcccaagccaaccactaggctaaccccaaatgggttat 15641310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 11465056 - 11465111
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    |||||||||||||||||||| |||| |||| |||||| ||||||| ||||| ||||    
T  11465056 ggaggagcaaactccaagatttcaagccaatcactaggccaacccgaaatgggtta 11465111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 23270675 - 23270721
Alignment:
Q  8 gagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  23270675 gagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 23270721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 25750760 - 25750810
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| |||  ||| |||||| |||||||||||||    
T  25750760 ggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatg 25750810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 31288095 - 31288145
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||||| |||||    
T  31288095 ggaggagcaaactccaagatcccaagccaaccactaggccaacccaaaatg 31288145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 34049870 - 34049820
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| ||||  ||||| |||||||||||||    
T  34049870 ggaggagcaaactccaagatcccaagccaactactagcccaaccccaaatg 34049820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 12317300 - 12317349
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||||||||||||||  ||| |||| |||||| |||||||||||||    
T  12317300 gaggagcaaactccaagattccaagccaaccactaggccaaccccaaatg 12317349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 22253295 - 22253344
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||||| || |||||| ||| |||| ||||||||||||||||||||    
T  22253295 gaggagcaaagtcaaagatcccaagccaaccactagaccaaccccaaatg 22253344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 36954865 - 36954816
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||||||||||||||| |||  ||| |||||| |||||||||||||    
T  36954865 gaggagcaaactccaagatcccaaggcaaccactaggccaaccccaaatg 36954816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 38086469 - 38086518
Alignment:
Q  9 agcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtt 58  Q
    |||| |||||| ||||||||| ||| |||||||||||| |||||||||||    
T  38086469 agcacactccacgatctcaaatcaaccactagaccaactccaaatgagtt 38086518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 33709650 - 33709694
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccc 48  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||    
T  33709650 ggaggagcaaactccaagatcccaagccaaccactaggccaaccc 33709694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 37495095 - 37495059
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactag 40  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  37495095 ggaggagcaaactccaagatctcaagccaaccactag 37495059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 10091240 - 10091185
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||||||| ||||    
T  10091240 ggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtta 10091185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 13332572 - 13332626
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtt 58  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||||||    
T  13332572 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgagtt 13332626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 28089868 - 28089818
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||||||||    
T  28089868 ggaggagcaaactccaagatctcaagccaaccactaggccaaccccaaatg 28089818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 31713045 - 31713094
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||    
T  31713045 gaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatg 31713094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 17197099 - 17197154
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||| |||||||| |||||| || |||||||||| ||||    
T  17197099 ggaggagcaaactccaagatcgcaaaccaaccactaggccgaccccaaatgggtta 17197154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 18044159 - 18044104
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||||||||||| ||||    
T  18044159 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtta 18044104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 28003888 - 28003837
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatga 55  Q
    ||||||||||||||||||||| ||| |||| ||||||| |||||||||||||    
T  28003888 ggaggagcaaactccaagatcccaagccaaccactagatcaaccccaaatga 28003837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 2103107 - 2103057
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  2103107 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 2103057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 2344351 - 2344301
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  2344351 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 2344301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 2751323 - 2751273
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  2751323 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 2751273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 7176011 - 7176061
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  7176011 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 7176061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 7275329 - 7275279
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  7275329 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 7275279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 21217982 - 21218032
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  21217982 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 21218032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 22119940 - 22119890
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  22119940 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 22119890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 23854448 - 23854398
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  23854448 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 23854398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 31197639 - 31197593
Alignment:
Q  8 gagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  31197639 gagcaaactccaagatcccaagccaaccactagaccaaccccaaatg 31197593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 40543059 - 40543109
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  40543059 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 40543109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 40332150 - 40332101
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||| |||| |||| |||||||||||| |||||||    
T  40332150 gaggagcaaactccaagatttcaagccaaccactagaccaactccaaatg 40332101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 8435846 - 8435894
Alignment:
Q  6 aggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||| |||  ||| ||||||||||||||||||||    
T  8435846 aggagcaaactccaagatcccaagtcaaccactagaccaaccccaaatg 8435894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 21370647 - 21370599
Alignment:
Q  6 aggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||| ||||||||||||| |||||||| |||||| |||||||||||||    
T  21370647 aggagtaaactccaagatcccaaaccaaccactaggccaaccccaaatg 21370599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 27312203 - 27312155
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaat 53  Q
    |||||||||||||||||||| ||| |||| |||||| ||||||||||||    
T  27312203 gaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 27312155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 7799981 - 7800031
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| ||||||  ||||||||||||    
T  7799981 ggaggagcaaactccaagatcccaagccaaccactaggtcaaccccaaatg 7800031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 17212105 - 17212055
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||  |||||||||||||    
T  17212105 ggaggagcaaactccaagatcccaagccaaccactaagccaaccccaaatg 17212055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 22638340 - 22638294
Alignment:
Q  8 gagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  22638340 gagcaaactctaagatctcaagtcaaccactagaccaaccccaaatg 22638294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 22696371 - 22696317
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    |||||||| ||||||||||| |||| ||| |||||| |||||||| |||||||||    
T  22696371 gaggagcacactccaagatcccaaatcaaccactaggccaacccctaatgagtta 22696317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 3950938 - 3950991
Alignment:
Q  5 gaggagcaaactccaagat-ctcaaaccaagcactagaccaaccccaaatgagt 57  Q
    ||||||||  ||||||||| ||||| |||| |||||||||||||||||||||||    
T  3950938 gaggagcacgctccaagattctcaagccaaccactagaccaaccccaaatgagt 3950991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 3951140 - 3951193
Alignment:
Q  5 gaggagcaaactccaagatctcaaa-ccaagcactagaccaaccccaaatgagt 57  Q
    |||||||| ||||||||||| | || |||| |||||||||||||||||||||||    
T  3951140 gaggagcacactccaagatccccaagccaaccactagaccaaccccaaatgagt 3951193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 11997900 - 11997851
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||||||||||||||| ||| |||| |||||| |||||| ||||||    
T  11997900 gaggagcaaactccaagatcccaagccaaccactagcccaaccacaaatg 11997851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 21574253 - 21574302
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||| ||||||| ||| |||||||| |||||| |||||||||||||    
T  21574253 gaggagcacactccaaaatcccaaaccaaccactaggccaaccccaaatg 21574302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 27704052 - 27704003
Alignment:
Q  6 aggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatga 55  Q
    ||||||||||| ||||||||||| |||| |||| ||||||| ||||||||    
T  27704052 aggagcaaacttcaagatctcaagccaaccactggaccaactccaaatga 27704003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Original strand, 40491741 - 40491774
Alignment:
Q  63 aaaatcaattcttgttaccgcagaaccaaacata 96  Q
    ||||||||||||||| ||||||||||||||||||    
T  40491741 aaaatcaattcttgtcaccgcagaaccaaacata 40491774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 37056265 - 37056217
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaat 53  Q
    |||||||| ||||||||||| |||||||| ||||| | |||||||||||    
T  37056265 gaggagcacactccaagatcacaaaccaaccactaaatcaaccccaaat 37056217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 40940873 - 40940818
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||||||| ||||    
T  40940873 ggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtta 40940818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 4462676 - 4462626
Alignment:
Q  9 agcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    |||||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  4462676 agcaaactccaagatctcaagccaaccactaggccaaccccaaatgagtta 4462626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 9842969 - 9842919
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||||||||    
T  9842969 ggaggagaaaactccaagatcccaaaccaaccactagaccaaccccaaatg 9842919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 25289863 - 25289913
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  25289863 ggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatg 25289913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 11390650 - 11390601
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaat 53  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||||||    
T  11390650 ggaggagaaaactccaagatctcaaaccaaccactaggccaaccccaaat 11390601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 50583039 - 50582990
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||    
T  50583039 gaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatg 50582990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 30807302 - 30807358
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagttat 60  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||||||||||| |||||    
T  30807302 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttat 30807358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 35492959 - 35492904
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||||||||||| ||||    
T  35492959 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtta 35492904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 46576396 - 46576341
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||||||||||| ||||    
T  46576396 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtta 46576341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 30257672 - 30257622
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  30257672 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 30257622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 34492724 - 34492774
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  34492724 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 34492774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 45529903 - 45529953
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  45529903 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 45529953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 53424325 - 53424375
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  53424325 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 53424375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 4252546 - 4252595
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||| ||||||||||||||| |||| |||||| |||||||||||||    
T  4252546 gaggagcacactccaagatctcaagccaaccactaggccaaccccaaatg 4252595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 14343437 - 14343478
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaa 45  Q
    |||||||||||||||||||||||||||||| || ||||||||    
T  14343437 ggaggagcaaactccaagatctcaaaccaaccaatagaccaa 14343478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 25379809 - 25379760
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaat 53  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||||||||||    
T  25379809 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 25379760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 15566648 - 15566692
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccc 48  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||    
T  15566648 ggaggagcaaactccaagatctcaagccaaccactaggccaaccc 15566692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 21362991 - 21362936
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||| |||  ||| |||||| ||||||||||||| ||||    
T  21362991 ggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtta 21362936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 45272565 - 45272620
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||| ||| ||||  ||||| ||||||||||||| ||||    
T  45272565 ggaggagcaaactccaagatcccaagccaacgactaggccaaccccaaatgggtta 45272620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 7470364 - 7470414
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||||||||||||||||||||  ||| |||||| | |||||||||||    
T  7470364 ggaggagcaaactccaagatctcaagtcaaccactaggcaaaccccaaatg 7470414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 8456299 - 8456349
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||||||||| |||||| ||| |||| |||||| |||||||||||||    
T  8456299 ggaggagcaaactcgaagatcccaagccaaccactaggccaaccccaaatg 8456349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 18177040 - 18177086
Alignment:
Q  8 gagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||||||||||||||||  ||| |||||| |||||||||||||    
T  18177040 gagcaaactccaagatctcaagtcaaccactaggccaaccccaaatg 18177086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 26158865 - 26158808
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcac-tagaccaaccccaaatgagttattt 62  Q
    |||||||| ||||||||||||||| |||| ||| ||| |||||||||||||||||||||    
T  26158865 gaggagcacactccaagatctcaagccaa-cacataggccaaccccaaatgagttattt 26158808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 31537987 - 31538037
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||||||||||||||||  || |||| |||||| |||||||||||||    
T  31537987 ggaggagcaaactccaagatcctaagccaaccactaggccaaccccaaatg 31538037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 40133598 - 40133648
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||| ||| ||| |||| |||||| |||||||||||||    
T  40133598 ggaggagcaaactccaaaatcccaagccaaccactaggccaaccccaaatg 40133648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 48977436 - 48977386
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| |||  ||| |||||| |||||||||||||    
T  48977436 ggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatg 48977386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 52455798 - 52455848
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| | | |||| |||||| |||||||||||||    
T  52455798 ggaggagcaaactccaagatccctagccaaccactaggccaaccccaaatg 52455848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 9853664 - 9853623
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaa 45  Q
    ||||||||||||||||||||| ||||| || |||||||||||    
T  9853664 ggaggagcaaactccaagatcccaaactaaccactagaccaa 9853623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 16140344 - 16140295
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||| |||||||||| ||||| || |||||| |||||||||||||    
T  16140344 gaggagcaagctccaagatcccaaactaatcactaggccaaccccaaatg 16140295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 27887471 - 27887422
Alignment:
Q  9 agcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtt 58  Q
    |||| ||||||| ||||||| |||| ||||||| ||||||||||||||||    
T  27887471 agcacactccaatatctcaagccaaccactagatcaaccccaaatgagtt 27887422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 36660817 - 36660768
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||  ||||||| ||||||  ||||||||||||    
T  36660817 gaggagcaaactccaagatcctaaaccaaccactaggtcaaccccaaatg 36660768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 11941359 - 11941414
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||||||| ||||    
T  11941359 ggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtta 11941414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 17324814 - 17324760
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtt 58  Q
    ||||||||||||||||||||  |||||||| |||||| |||||||||||||||||    
T  17324814 ggaggagcaaactccaagataccaaaccaaccactaggccaaccccaaatgagtt 17324760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 44946202 - 44946252
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  44946202 ggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatg 44946252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 18976574 - 18976624
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  18976574 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 18976624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 44976303 - 44976359
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagttat 60  Q
    |||||||||||| |||||||| ||| |||| |||||| |||||||||||||| ||||    
T  44976303 ggaggagcaaaccccaagatcccaagccaaccactaggccaaccccaaatgaattat 44976359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 6714430 - 6714485
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||||||| |||| || ||| |||| |||||||| ||||    
T  6714430 ggaggagcaaactccaagatctcaagccaaccattaggccaatcccaaatgggtta 6714485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 41314040 - 41313985
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||| |||||||| |||||   |||||||||||| ||||    
T  41314040 ggaggagcaaactccaagatcccaaaccaaccactacggcaaccccaaatgggtta 41313985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 19054073 - 19054023
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||| ||||||||||||||| |||| |||||| || ||||||||||    
T  19054073 ggaggagcagactccaagatctcaagccaatcactaggcccaccccaaatg 19054023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 19849881 - 19849847
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcact 38  Q
    |||||||||||||||||||||||||||||| ||||    
T  19849881 ggaggagcaaactccaagatctcaaaccaaccact 19849847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 30466980 - 30467034
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||| |||||||||| ||| |||||||| |||||| ||||||||||||| ||||    
T  30466980 gaggaacaaactccaatatcccaaaccaaccactaggccaaccccaaatgggtta 30467034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 33827722 - 33827772
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||||| |||||||||| ||| |||| |||||| |||||||||||||    
T  33827722 ggaggagcaatctccaagatcccaagccaaccactaggccaaccccaaatg 33827772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 8192501 - 8192550
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||| ||||||||||| ||| |||| |||||| |||||||||||||    
T  8192501 gaggagcacactccaagatcccaagccaaccactaggccaaccccaaatg 8192550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 25293213 - 25293164
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||||||||||||||| |||  ||| ||||||||||||| ||||||    
T  25293213 gaggagcaaactccaagatcccaagtcaaccactagaccaacctcaaatg 25293164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 41329891 - 41329842
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaat 53  Q
    |||||||||||||| |||||| ||||| || |||||| ||||||||||||    
T  41329891 ggaggagcaaactctaagatcccaaactaaccactaggccaaccccaaat 41329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 38784329 - 38784377
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaat 53  Q
    ||||||||||||||||||||  || |||| ||||||| |||||||||||    
T  38784329 gaggagcaaactccaagatcctaacccaaacactagatcaaccccaaat 38784377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 27455015 - 27455070
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||||||| ||||    
T  27455015 ggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtta 27455070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 46113551 - 46113600
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaat 53  Q
    ||||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  46113551 ggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaat 46113600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 8077695 - 8077640
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||||||||||| ||||    
T  8077695 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtta 8077640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 24674441 - 24674386
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||||||||||| ||||    
T  24674441 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtta 24674386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 37349570 - 37349515
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagttat 60  Q
    ||||||||||||| ||||||||||  ||| ||||| ||||||||||||||||||||    
T  37349570 gaggagcaaactctaagatctcaagtcaaccactaaaccaaccccaaatgagttat 37349515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 47091735 - 47091688
Alignment:
Q  7 ggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||||||||||||||||| |||| |||||| |||||||||||||    
T  47091735 ggagcaaactccaagatctcaagccaaccactaggccaaccccaaatg 47091688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 4621386 - 4621436
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  4621386 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 4621436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 7197395 - 7197445
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  7197395 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 7197445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 29057486 - 29057536
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||| |||||||||||||||| |||||||| |||||| |||||||||||||    
T  29057486 ggagcagcaaactccaagatcccaaaccaaccactaggccaaccccaaatg 29057536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 31162786 - 31162740
Alignment:
Q  16 tccaagatctcaaaccaagcactagaccaaccccaaatgagttattt 62  Q
    |||||||||||||||||| ||||||  ||||||||||||||||||||    
T  31162786 tccaagatctcaaaccaaccactaggtcaaccccaaatgagttattt 31162740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 34778390 - 34778340
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  34778390 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 34778340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 24122071 - 24122016
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    |||||||||||| |||||||| ||| |||| |||||  ||||||||||||||||||    
T  24122071 ggaggagcaaaccccaagatcccaagccaaccactaagccaaccccaaatgagtta 24122016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 1138626 - 1138572
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    |||||||| ||||||||||||||| |||| ||||||  |||||||||||| ||||    
T  1138626 gaggagcacactccaagatctcaagccaaccactaggtcaaccccaaatgggtta 1138572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 1378793 - 1378739
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtt 58  Q
    ||||||| ||||||||||||  |||  ||| ||||||||||||||||||||||||    
T  1378793 ggaggagtaaactccaagattccaagtcaaccactagaccaaccccaaatgagtt 1378739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 6776190 - 6776148
Alignment:
Q  6 aggagcaaactccaagatctcaaaccaagcactagaccaaccc 48  Q
    ||||||||||||||||||| |||||||| |||||| |||||||    
T  6776190 aggagcaaactccaagatcccaaaccaaccactaggccaaccc 6776148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 15059551 - 15059601
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||  ||| |||| |||||| |||||||||||||    
T  15059551 ggaggagcaaactccaagattccaagccaaccactaggccaaccccaaatg 15059601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 20487339 - 20487389
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| | | |||| ||||| ||||||||||||||    
T  20487339 ggaggagcaaactccaagatcccgagccaaccactaaaccaaccccaaatg 20487389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 30677224 - 30677174
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||| ||||| |||||||| ||||||  ||||||||||||    
T  30677224 ggaggagcaaactcctagatcccaaaccaaccactaggtcaaccccaaatg 30677174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 46607858 - 46607808
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| |||  ||| |||||| |||||||||||||    
T  46607858 ggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatg 46607808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 52135174 - 52135128
Alignment:
Q  8 gagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||| |||  ||| ||||||||||||||||||||    
T  52135174 gagcaaactccaagatcccaagtcaaccactagaccaaccccaaatg 52135128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 32729592 - 32729543
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||| |||||| ||| |||| |||||| |||||||||||||    
T  32729592 gaggagcaaactcgaagatcccaagccaaccactaggccaaccccaaatg 32729543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 1095154 - 1095198
Alignment:
Q  14 actccaagatctcaaaccaagcactagaccaaccccaaatgagtt 58  Q
    ||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  1095154 actccaagatcccaagccaaccactagaccaaccccaaataagtt 1095198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 8556 - 8614
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagttattt 62  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||||||||||| |||||||    
T  8556 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttattt 8614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 22576115 - 22576057
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagttattt 62  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||||||||||| |||||||    
T  22576115 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttattt 22576057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 9843985 - 9843936
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  9843985 gaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatg 9843936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 9208299 - 9208243
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagttatt 61  Q
    |||||||||||||||||||| ||| |||| ||||||| |||||||||||| ||||||    
T  9208299 gaggagcaaactccaagatcccaatccaaccactagaacaaccccaaatgggttatt 9208243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 11007213 - 11007158
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||| ||| |||| ||||||| |||||||||||| ||||    
T  11007213 ggaggagcaaactccaagatcccaagccaaccactagatcaaccccaaatgggtta 11007158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 9239023 - 9238973
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  9239023 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 9238973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 12591685 - 12591635
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  12591685 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 12591635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 15360247 - 15360297
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  15360247 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 15360297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 28672114 - 28672060
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||||||  ||| |||||| ||||||||||||| ||||    
T  28672114 gaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtta 28672060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 100
Target Start/End: Original strand, 14391042 - 14391083
Alignment:
Q  59 atttaaaatcaattcttgttaccgcagaaccaaacatacact 100  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  14391042 atttaaaatcaattgttgtaaccgcagaaccaaacatacact 14391083  T

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Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 11448919 - 11448871
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaa 52  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||    
T  11448919 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaa 11448871  T

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Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 33499521 - 33499466
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagttat 60  Q
    |||||||||||||||||||| ||| |||| ||| || ||||||||||||| |||||    
T  33499521 gaggagcaaactccaagatcccaagccaaccaccaggccaaccccaaatgggttat 33499466  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 34147390 - 34147339
Alignment:
Q  8 gagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||| ||| |||| |||||| ||||||||||||| ||||    
T  34147390 gagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtta 34147339  T

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Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 34160006 - 34159955
Alignment:
Q  8 gagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||| ||| |||| |||||| ||||||||||||| ||||    
T  34160006 gagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtta 34159955  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 3222784 - 3222838
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    |||||||||||| ||||||| ||| |||| |||||| ||||||||||||| ||||    
T  3222784 gaggagcaaactgcaagatcccaagccaaccactaggccaaccccaaatgggtta 3222838  T

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Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 13753288 - 13753238
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||||||||||||||||  || |||| |||||| |||||||||||||    
T  13753288 ggaggagcaaactccaagatccaaagccaaccactaggccaaccccaaatg 13753238  T

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Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 21982469 - 21982519
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||| ||||||| ||| |||| |||||| |||||||||||||    
T  21982469 ggaggagcaaacttcaagatcccaagccaaccactaggccaaccccaaatg 21982519  T

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Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 33718615 - 33718657
Alignment:
Q  12 aaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||| |||||||| |||||||||||||| |||||    
T  33718615 aaactccaagatcccaaaccaaccactagaccaaccctaaatg 33718657  T

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Target: scaffold0028 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 27823 - 27774
Alignment:
Q  5 gaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  27823 gaggagcaaactccaaaatcccaaaccaaccactagaccaaccccaaatg 27774  T

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Target: scaffold0623 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 1205 - 1256
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatga 55  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||||||||||||    
T  1205 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatga 1256  T

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Target: scaffold0459 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 10842 - 10893
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatga 55  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||||||||||||    
T  10842 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatga 10893  T

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Target: scaffold0366 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 9448 - 9499
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatga 55  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||||||||||||    
T  9448 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatga 9499  T

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Target: scaffold0366; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 12149 - 12200
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatga 55  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||||||||||||    
T  12149 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatga 12200  T

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Target: scaffold0576 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 5231 - 5281
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  5231 ggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 5281  T

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Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 66810 - 66760
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| ||||||||||| ||||||||    
T  66810 ggaggagcaaactccaagatcccaagccaaccactagaccaatcccaaatg 66760  T

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Target: scaffold0068 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 41793 - 41848
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatgagtta 59  Q
    ||||||||||||||||||||| |||  ||| |||||| ||||||||||||| ||||    
T  41793 ggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtta 41848  T

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Target: scaffold0460 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 8328 - 8378
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| | | |||| ||||| ||||||||||||||    
T  8328 ggaggagcaaactccaagatcccgagccaaccactaaaccaaccccaaatg 8378  T

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Target: scaffold0328 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 15039 - 14989
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||  |||| |||||| |||||||||||||    
T  15039 ggaggagcaaactccaagatcccaggccaaccactaggccaaccccaaatg 14989  T

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Target: scaffold0051 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 53020 - 53070
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||||||||||| ||| |||| |||||| |||| ||||||||    
T  53020 ggaggagcaaactccaagatcccaagccaaccactaggccaatcccaaatg 53070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 97515 - 97565
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    ||||||||||||| ||||||| ||| |||| |||||| |||||||||||||    
T  97515 ggaggagcaaactacaagatcccaagccaaccactaggccaaccccaaatg 97565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 7458 - 7507
Alignment:
Q  4 ggaggagcaaactccaagatctcaaaccaagcactagaccaaccccaaat 53  Q
    ||||||||||||||||||||| ||| ||||  ||||| ||||||||||||    
T  7458 ggaggagcaaactccaagatcccaagccaactactaggccaaccccaaat 7507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 40371 - 40323
Alignment:
Q  6 aggagcaaactccaagatctcaaaccaagcactagaccaaccccaaatg 54  Q
    |||||||||||||||||||  || |||| |||||| |||||||||||||    
T  40371 aggagcaaactccaagatcctaagccaaccactaggccaaccccaaatg 40323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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