View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14254_high_5 (Length: 476)

Name: NF14254_high_5
Description: NF14254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14254_high_5
NF14254_high_5
[»] chr1 (3 HSPs)
chr1 (15-401)||(38644872-38645260)
chr1 (25-80)||(8245427-8245482)
chr1 (27-65)||(42107036-42107074)
[»] chr4 (9 HSPs)
chr4 (22-79)||(34816749-34816806)
chr4 (22-80)||(29061614-29061672)
chr4 (27-80)||(38516118-38516171)
chr4 (31-80)||(53142176-53142225)
chr4 (27-73)||(40608216-40608262)
chr4 (27-72)||(38064753-38064798)
chr4 (424-456)||(31784791-31784823)
chr4 (27-71)||(34121098-34121142)
chr4 (25-73)||(40835464-40835512)
[»] chr8 (4 HSPs)
chr8 (22-78)||(35561215-35561271)
chr8 (22-80)||(30610849-30610907)
chr8 (31-70)||(10975786-10975825)
chr8 (27-73)||(3771630-3771676)
[»] scaffold0635 (1 HSPs)
scaffold0635 (25-80)||(4323-4378)
[»] chr2 (3 HSPs)
chr2 (25-80)||(10042692-10042747)
chr2 (25-80)||(6407940-6407995)
chr2 (27-80)||(30856621-30856674)
[»] chr6 (6 HSPs)
chr6 (27-73)||(33940958-33941004)
chr6 (22-70)||(9466653-9466701)
chr6 (22-73)||(23126832-23126883)
chr6 (22-80)||(2091378-2091436)
chr6 (31-80)||(278194-278243)
chr6 (22-79)||(19101359-19101416)
[»] chr3 (6 HSPs)
chr3 (10-80)||(50174026-50174096)
chr3 (28-72)||(50293690-50293734)
chr3 (22-78)||(54026694-54026750)
chr3 (31-73)||(19582343-19582385)
chr3 (31-80)||(25750879-25750928)
chr3 (27-80)||(44685373-44685426)
[»] chr7 (2 HSPs)
chr7 (27-78)||(31446663-31446714)
chr7 (30-70)||(38735908-38735948)
[»] chr5 (3 HSPs)
chr5 (22-80)||(28979068-28979126)
chr5 (27-80)||(38734677-38734730)
chr5 (28-80)||(33388724-33388776)


Alignment Details
Target: chr1 (Bit Score: 334; Significance: 0; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 15 - 401
Target Start/End: Complemental strand, 38645260 - 38644872
Alignment:
Q  15 atgaaccaaattaaacaaaaataatttaatcacatcaattgacatcatttaattttattatcttttnnnnnnnn--tagtttatagtgtgtgttaaaata 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||          ||||||||||||||||||||||||    
T  38645260 atgaatcaaattaaacaaaaataatttaatcacatcaattgacatcatttaattttattctcttttaaaaaaaaaatagtttatagtgtgtgttaaaata 38645161  T
Q  113 tttttatttagactaatcctttttactatattatacttaaactaactttgctatcaaagtacctttttcatgtaccttcccacttggcaaaccaccacca 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38645160 tttttatttagactaatcctttttactatattatacttaaactaactttgctatcaaagtacctttttcatgtaccttcccacttagcaaaccaccacca 38645061  T
Q  213 ccacaagatatccttcttcatcaacctctttgagattgatttatgttttcaaaagggaacaatacccaatttttgaagttatggtgtgtatttagagaat 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38645060 ccacaagatatccttcttcatcaacctctttgagattgatttatgttttcaaaggggaacaatacccaatttttgaagttatggtgtgtatttagagaat 38644961  T
Q  313 cagaggtgattacatacacaaaagtaatattgatctatcgagaaatattataaacattatattgagaggcaaatcacccctttagttcg 401  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  38644960 cagaggtgattacatacacaaaagtaatattgatctatcgagaaatattataaacattatatcgagaggcaaatcacccctttagttcg 38644872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 8245482 - 8245427
Alignment:
Q  25 ttaaacaaaaataatttaatcacatcaattgacatcatttaattttattatctttt 80  Q
    |||||||||||||||| ||||||||||||  |||||||||||||||||| ||||||    
T  8245482 ttaaacaaaaataattaaatcacatcaatcaacatcatttaattttattctctttt 8245427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 42107036 - 42107074
Alignment:
Q  27 aaacaaaaataatttaatcacatcaattgacatcattta 65  Q
    |||||||||||||| ||||||||||||| ||||||||||    
T  42107036 aaacaaaaataattaaatcacatcaattaacatcattta 42107074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 5e-17; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 34816749 - 34816806
Alignment:
Q  22 aaattaaacaaaaataatttaatcacatcaattgacatcatttaattttattatcttt 79  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||    
T  34816749 aaattaaacaaaaataatttagtcacgtcaattgacatcatttaattttattctcttt 34816806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 29061672 - 29061614
Alignment:
Q  22 aaattaaacaaaaataatttaatcacatcaattgacatcatttaattttattatctttt 80  Q
    ||||||| |||||| |||||||||| |||||||||||||||||| ||||||| ||||||    
T  29061672 aaattaagcaaaaacaatttaatcatatcaattgacatcatttacttttattctctttt 29061614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 38516171 - 38516118
Alignment:
Q  27 aaacaaaaataatttaatcacatcaattgacatcatttaattttattatctttt 80  Q
    |||||||| ||||| ||||||||||||  |||||||||||||||||| ||||||    
T  38516171 aaacaaaattaattaaatcacatcaatcaacatcatttaattttattctctttt 38516118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 53142225 - 53142176
Alignment:
Q  31 aaaaataatttaatcacatcaattgacatcatttaattttattatctttt 80  Q
    |||||||||| ||||||||||||  |||||||||||||||||| ||||||    
T  53142225 aaaaataattaaatcacatcaatcaacatcatttaattttattttctttt 53142176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 40608216 - 40608262
Alignment:
Q  27 aaacaaaaataatttaatcacatcaattgacatcatttaattttatt 73  Q
    |||||||||||| | ||||||||||||| | ||||||||||||||||    
T  40608216 aaacaaaaataaatcaatcacatcaattaatatcatttaattttatt 40608262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 38064798 - 38064753
Alignment:
Q  27 aaacaaaaataatttaatcacatcaattgacatcatttaattttat 72  Q
    |||||||| ||||||| || |||||||| |||||||||||||||||    
T  38064798 aaacaaaattaatttagtctcatcaattaacatcatttaattttat 38064753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 456
Target Start/End: Complemental strand, 31784823 - 31784791
Alignment:
Q  424 aaataagtgattttcaaatatattatgtttttt 456  Q
    |||| ||||||||||||||||||||||||||||    
T  31784823 aaatgagtgattttcaaatatattatgtttttt 31784791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 34121098 - 34121142
Alignment:
Q  27 aaacaaaaataatttaatcacatcaattgacatcatttaatttta 71  Q
    ||||||||||||| |||||||||||||  |||||||||| |||||    
T  34121098 aaacaaaaataatataatcacatcaatcaacatcatttagtttta 34121142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 40835464 - 40835512
Alignment:
Q  25 ttaaacaaaaataatttaatcacatcaattgacatcatttaattttatt 73  Q
    |||||||||||||| ||| ||||||||| | | ||||||||||||||||    
T  40835464 ttaaacaaaaataaattagtcacatcaactaatatcatttaattttatt 40835512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 35561215 - 35561271
Alignment:
Q  22 aaattaaacaaaaataatttaatcacatcaattgacatcatttaattttattatctt 78  Q
    |||||||||||||||||| |||| |||||||||||||||||||||| ||||| ||||    
T  35561215 aaattaaacaaaaataatataattacatcaattgacatcatttaatgttattctctt 35561271  T

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Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 30610849 - 30610907
Alignment:
Q  22 aaattaaacaaaaataatttaatcacatcaattgacatcatttaattttattatctttt 80  Q
    ||||||||||||||| ||||||||||||||||  | |||||||| ||||||| ||||||    
T  30610849 aaattaaacaaaaattatttaatcacatcaatcaatatcatttagttttattttctttt 30610907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 70
Target Start/End: Complemental strand, 10975825 - 10975786
Alignment:
Q  31 aaaaataatttaatcacatcaattgacatcatttaatttt 70  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  10975825 aaaaataatttagtcacatcaattgacattatttaatttt 10975786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 3771676 - 3771630
Alignment:
Q  27 aaacaaaaataatttaatcacatcaattgacatcatttaattttatt 73  Q
    ||||||||||||| |||||||||||||  |||||||||| |||||||    
T  3771676 aaacaaaaataatataatcacatcaatcaacatcatttagttttatt 3771630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 4323 - 4378
Alignment:
Q  25 ttaaacaaaaataatttaatcacatcaattgacatcatttaattttattatctttt 80  Q
    |||||||||| |||||||||||||| |||||| |||||||||||||||| ||||||    
T  4323 ttaaacaaaattaatttaatcacataaattgaaatcatttaattttattctctttt 4378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 10042747 - 10042692
Alignment:
Q  25 ttaaacaaaaataatttaatcacatcaattgacatcatttaattttattatctttt 80  Q
    |||||||||| |||||||||||||| |||||| |||||||||||||||| ||||||    
T  10042747 ttaaacaaaattaatttaatcacataaattgaaatcatttaattttattctctttt 10042692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 6407940 - 6407995
Alignment:
Q  25 ttaaacaaaaataatttaatcacatcaattgacatcatttaattttattatctttt 80  Q
    |||||||||||||||| ||||||||||||  |||||||||| ||||||| ||||||    
T  6407940 ttaaacaaaaataattaaatcacatcaatcaacatcatttagttttattctctttt 6407995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 30856621 - 30856674
Alignment:
Q  27 aaacaaaaataatttaatcacatcaattgacatcatttaattttattatctttt 80  Q
    |||||||||||||||| ||||||||||| | ||||||||||||| || ||||||    
T  30856621 aaacaaaaataatttagtcacatcaattaatatcatttaatttttttctctttt 30856674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 33941004 - 33940958
Alignment:
Q  27 aaacaaaaataatttaatcacatcaattgacatcatttaattttatt 73  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||    
T  33941004 aaacaaaaataatttaatcacatcaatcaacatcatttaattttatt 33940958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 9466653 - 9466701
Alignment:
Q  22 aaattaaacaaaaataatttaatcacatcaattgacatcatttaatttt 70  Q
    ||||||||||||||||||||||| | ||||||||| || ||||||||||    
T  9466653 aaattaaacaaaaataatttaattatatcaattgatattatttaatttt 9466701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 23126832 - 23126883
Alignment:
Q  22 aaattaaacaaaaataatttaatcacatcaattgacatcatttaattttatt 73  Q
    ||||||| ||||||||||| ||||||||||||  ||||| ||||||||||||    
T  23126832 aaattaatcaaaaataattaaatcacatcaatcaacatcgtttaattttatt 23126883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 2091378 - 2091436
Alignment:
Q  22 aaattaaacaaaaataatttaatcacatcaattgacatcatttaattttattatctttt 80  Q
    |||| ||| |||||||||||||||||||||||| | || ||| ||||||||| ||||||    
T  2091378 aaataaaataaaaataatttaatcacatcaattaatattattgaattttattctctttt 2091436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 278243 - 278194
Alignment:
Q  31 aaaaataatttaatcacatcaattgacatcatttaattttattatctttt 80  Q
    |||||||||||||||||||||||  || |||||| |||||||| ||||||    
T  278243 aaaaataatttaatcacatcaatcaacgtcatttgattttattctctttt 278194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 19101359 - 19101416
Alignment:
Q  22 aaattaaacaaaaataatttaatcacatcaattgacatcatttaattttattatcttt 79  Q
    |||||||| |||||  ||||||| | |||||||||||| ||||||||||||| |||||    
T  19101359 aaattaaagaaaaagtatttaattatatcaattgacattatttaattttattctcttt 19101416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 50174096 - 50174026
Alignment:
Q  10 gtgagatgaaccaaattaaacaaaaataatttaatcacatcaattgacatcatttaattttattatctttt 80  Q
    |||| |||||| ||||| || |||||||||||| |||||||||||||||| ||| ||||||||| ||||||    
T  50174096 gtgaaatgaacaaaatttaagaaaaataatttagtcacatcaattgacattattcaattttattctctttt 50174026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 50293690 - 50293734
Alignment:
Q  28 aacaaaaataatttaatcacatcaattgacatcatttaattttat 72  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||    
T  50293690 aacaaaaataattaaatcacatcaatcaacatcatttaattttat 50293734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 54026750 - 54026694
Alignment:
Q  22 aaattaaacaaaaataatttaatcacatcaattgacatcatttaattttattatctt 78  Q
    ||||||||||||||  ||||||||||||||| ||| ||||| |||||||||| ||||    
T  54026750 aaattaaacaaaaaatatttaatcacatcaaatgatatcatctaattttattttctt 54026694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 19582343 - 19582385
Alignment:
Q  31 aaaaataatttaatcacatcaattgacatcatttaattttatt 73  Q
    |||||||||| ||||||||||||  ||||||||||||||||||    
T  19582343 aaaaataattaaatcacatcaatcaacatcatttaattttatt 19582385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 25750879 - 25750928
Alignment:
Q  31 aaaaataatttaatcacatcaattgacatcatttaattttattatctttt 80  Q
    |||||||||| ||| ||||||||  |||||||||||||||||| ||||||    
T  25750879 aaaaataattaaattacatcaatcaacatcatttaattttattttctttt 25750928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 44685373 - 44685426
Alignment:
Q  27 aaacaaaaataatttaatcacatcaattgacatcatttaattttattatctttt 80  Q
    |||||||| ||||||||||||||||||| | |||||| ||||| ||| ||||||    
T  44685373 aaacaaaactaatttaatcacatcaattaatatcattgaatttcattctctttt 44685426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 31446714 - 31446663
Alignment:
Q  27 aaacaaaaataatttaatcacatcaattgacatcatttaattttattatctt 78  Q
    |||||||||||||||| ||| ||||||  |||||||||||||||||| ||||    
T  31446714 aaacaaaaataatttattcatatcaatcaacatcatttaattttattctctt 31446663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 38735948 - 38735908
Alignment:
Q  30 caaaaataatttaatcacatcaattgacatcatttaatttt 70  Q
    ||||||||||| ||||||||||||  |||||||||||||||    
T  38735948 caaaaataattaaatcacatcaatcaacatcatttaatttt 38735908  T

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Target: chr5 (Bit Score: 31; Significance: 0.00000004; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 28979068 - 28979126
Alignment:
Q  22 aaattaaacaaaaataatttaatcacatcaattgacatcatttaattttattatctttt 80  Q
    |||||||| |||||  ||||||||| |||||||||| | ||| ||||||||||||||||    
T  28979068 aaattaaagaaaaaatatttaatcatatcaattgactttattcaattttattatctttt 28979126  T

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Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 38734730 - 38734677
Alignment:
Q  27 aaacaaaaataatttaatcacatcaattgacatcatttaattttattatctttt 80  Q
    ||||||||||||||  |||||||||||  |||||||||| ||||||| ||||||    
T  38734730 aaacaaaaataattagatcacatcaatcaacatcatttagttttattctctttt 38734677  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 33388724 - 33388776
Alignment:
Q  28 aacaaaaataatttaatcacatcaattgacatcatttaattttattatctttt 80  Q
    ||||||| ||||||| ||||||||||| | |||||| ||||| ||||||||||    
T  33388724 aacaaaactaatttagtcacatcaattaatatcattgaatttaattatctttt 33388776  T

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