View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14257_high_5 (Length: 429)
Name: NF14257_high_5
Description: NF14257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14257_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 380; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 380; E-Value: 0
Query Start/End: Original strand, 19 - 410
Target Start/End: Original strand, 12690442 - 12690833
Alignment:
| Q |
19 |
gattttttgatacttcaactactctccgaatatcataaaaaatataatatcgtgttcacacacaaaaaaccaataacatttgcaacattatttatggtct |
118 |
Q |
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| T |
12690442 |
gattttttgatacttcaactactctccgaatatcataaaaaatataatatcgtgttcacacacaaaaaaccaataacatttgcaacattatttatggtct |
12690541 |
T |
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| Q |
119 |
ctttatcaataacatttcaactgcaatgtatttgatggggttgtgtagcatagcactctttcaatccaatcaatgttaacgtccatgtatgaagtaacga |
218 |
Q |
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| T |
12690542 |
ctttatcaataacatttcaactgcaatgtatttgatggggttgtgtagcgtagcactctttcaatccaatcaatgttaacgtccatgtatgaagtaacga |
12690641 |
T |
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| Q |
219 |
tcactatgatgcatttttgcatgtactaaaagagtccatgtagacaaacatcgtgacaattgttactttagacgatgatgtcataactggtgtgattgaa |
318 |
Q |
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| T |
12690642 |
tcactatgatgcatttttgcatgtactgaaagagtccatgtagacaaacatcgtgacaactgttactttagacgatgatgtcataactggtgtgattgaa |
12690741 |
T |
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| Q |
319 |
agagtcatatgtggtctaagagaggatattatagttggaatcattgttgctaaagagatttctaatatataatcattaaatcttaactttca |
410 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12690742 |
agagtcatatgtggtctaagagaggatattatagttggaatcattgttgctaaagagatttctaatatataatcattaaatcttaactttca |
12690833 |
T |
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