View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14257_low_11 (Length: 321)
Name: NF14257_low_11
Description: NF14257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14257_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 20 - 303
Target Start/End: Original strand, 44488957 - 44489240
Alignment:
| Q |
20 |
atatagtctgaaaatgtgtttataaatgaagacaatatatcttcattgtaaaagctgattttgtaaggattgaattagacctaaccaaaagatgtata-- |
117 |
Q |
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| T |
44488957 |
atatagtctgaaaatgtgtttataaatgaagacaat----cttcattgtaaaagctgattttgtaaggattgaattagacctaaccaaaagatgtatata |
44489052 |
T |
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| Q |
118 |
--gtttctgaaaatgaaataaaaattgttttcttaccaaatgttggggaattaaaagttgtccatccatcaccaacactgtgattgccggtgataattgt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44489053 |
tagtttctgaaaatgaaataaaaattgttttcttaccaaatgttggggaattaaaagttgtccatccatcaccaacactgtgattgccggtgataattgt |
44489152 |
T |
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| Q |
216 |
tcggttgattccatctccgatcatcatcagatacgccttgttttgagggatagagacatattcttcataaacgccctctttgataaat |
303 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44489153 |
tcggttgattccatctccgatcatcatcagatacgccttgttttgagggatagagacatattcttcataaacgccctctttgataaat |
44489240 |
T |
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