View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14257_low_13 (Length: 292)
Name: NF14257_low_13
Description: NF14257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14257_low_13 |
 | |
|
| [»] scaffold0067 (1 HSPs) |
| | |
|
| [»] scaffold0912 (1 HSPs) |
| | |
|
| [»] scaffold0043 (1 HSPs) |
| | |
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Alignment Details
Target: chr3 (Bit Score: 269; Significance: 1e-150; HSPs: 24)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 28128023 - 28128299
Alignment:
| Q |
1 |
attaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttg |
100 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
28128023 |
attaaaagattgattgaaaatggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttg |
28128122 |
T |
|
| Q |
101 |
aaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28128123 |
aaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactac |
28128222 |
T |
|
| Q |
201 |
aatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcattgt |
277 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
28128223 |
aatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacagtgtcattgt |
28128299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 28141954 - 28142230
Alignment:
| Q |
1 |
attaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttg |
100 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
28141954 |
attaaaagattgattgaaaatggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttg |
28142053 |
T |
|
| Q |
101 |
aaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28142054 |
aaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactac |
28142153 |
T |
|
| Q |
201 |
aatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcattgt |
277 |
Q |
| |
|
| |||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
28142154 |
attggccaaaaaagtggggaaggaacttaagcaatgcaaacaatttactaacgtcatcgatacaacagtgtcattgt |
28142230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 28045507 - 28045783
Alignment:
| Q |
1 |
attaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttg |
100 |
Q |
| |
|
||||||| ||| ||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
28045507 |
attaaaaaattaattgaaactagaaaggatcttgtaattggactccctggtcatcttccagatgttgaacgttattcatccaaacactatatttcttttg |
28045606 |
T |
|
| Q |
101 |
aaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactac |
200 |
Q |
| |
|
||||||| ||| |||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
28045607 |
aaagtagggaattcaaatacaaagagcttttagatgctctgaaagatgacaacaattatataaccaggttgcaagggatggggggcacaggaaaaactac |
28045706 |
T |
|
| Q |
201 |
aatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcattgt |
277 |
Q |
| |
|
| |||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
28045707 |
attggccaaagaagtgggtaaggaacttaagcactccaaacaatttacttacgtcatcgatacaacattgtcattgt |
28045783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 28474341 - 28474067
Alignment:
| Q |
1 |
attaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttg |
100 |
Q |
| |
|
|||| |||||||||| ||||||||||||| ||| ||||||| ||||||||| |||||||||||||||||| ||||||||| | |||||||| ||||| |
|
|
| T |
28474341 |
attacaagattgattcaaactggaaaggaacttcaaattggattccctgctcgtcttccagatgttgaacgctattcatcccaacactatattcctttta |
28474242 |
T |
|
| Q |
101 |
aaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactac |
200 |
Q |
| |
|
||||||| |||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28474241 |
aaagtagggaatccaaatacaaagagcttttagatgctctgaaagatgacaacaattttataaccgggttgcaagggatggggggcacaggaaaaactac |
28474142 |
T |
|
| Q |
201 |
aatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcatt |
275 |
Q |
| |
|
|||| ||| ||||||||| |||||||||||||||| |||||||||||| |||| ||||||| ||| ||||||| |
|
|
| T |
28474141 |
aatgtccatagaagtgggtaaggaacttaagcaatccaaacaatttaccagcgtcgtcgatacgacagtgtcatt |
28474067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 11 - 272
Target Start/End: Complemental strand, 27466385 - 27466124
Alignment:
| Q |
11 |
tgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttgaaagtagaaa |
110 |
Q |
| |
|
||||||||||| ||||||| |||| ||||||||||||||||| |||||||||||| || ||||||||||| |||||||||||||||||||||| | |
|
|
| T |
27466385 |
tgattgaaactagaaaggaacttgcaattggactccctgctcgtcttccagatgtcgagcgttattcatcttctcactatatttcttttgaaagtaggga |
27466286 |
T |
|
| Q |
111 |
atccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactacaatggccaaa |
210 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
27466285 |
atccaaatacaaagagcttttagatgctctgaaagattgcaacaattatataaccgggttgcaagggatggggggcacaggaaaaactacattggccaaa |
27466186 |
T |
|
| Q |
211 |
gaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtc |
272 |
Q |
| |
|
|||||||| |||||||||||| ||| |||||||||||| ||||||| ||||| ||| |||| |
|
|
| T |
27466185 |
gaagtgggtaaggaacttaagaaatccaaacaatttacccacgtcattgatacgacagtgtc |
27466124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 4 - 263
Target Start/End: Complemental strand, 28499790 - 28499531
Alignment:
| Q |
4 |
aaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttgaaa |
103 |
Q |
| |
|
|||||||| ||||||||||||||| | ||| ||||| ||||||||| | |||||||||||||||||||||||||||| | |||||||| ||||| ||| |
|
|
| T |
28499790 |
aaaagattaattgaaactggaaagcaactttcaattgaactccctgcccgtcttccagatgttgaacgttattcatcccaacactatattccttttaaaa |
28499691 |
T |
|
| Q |
104 |
gtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactacaat |
203 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
28499690 |
gtagggaatccaaatacaaagagcttttagatgctatgaaagatgacaacaattttataaccgggttgcaagggatggggggcacaggaaaaactacatt |
28499591 |
T |
|
| Q |
204 |
ggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatac |
263 |
Q |
| |
|
||||| |||||| || |||||||||||||| | ||||||||||||| ||||||||||||| |
|
|
| T |
28499590 |
ggccagagaagttggtaaggaacttaagcagtccaaacaatttactcacgtcatcgatac |
28499531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 4 - 275
Target Start/End: Complemental strand, 28515357 - 28515086
Alignment:
| Q |
4 |
aaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttgaaa |
103 |
Q |
| |
|
|||| ||| ||||||||||||||| | ||| ||||| ||||||||| | |||||||||||||||||||||||||||| | |||||||| ||||| ||| |
|
|
| T |
28515357 |
aaaatattaattgaaactggaaagcaactttcaattgaactccctgcccgtcttccagatgttgaacgttattcatcccaacactatattccttttaaaa |
28515258 |
T |
|
| Q |
104 |
gtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactacaat |
203 |
Q |
| |
|
| || |||| ||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||| | |
|
|
| T |
28515257 |
gcagggaatctaaatacaaagagcttttagatgctctgaaagatgacaacaattatataatcgggttgcaagggatggggggaacaggaaaaactacatt |
28515158 |
T |
|
| Q |
204 |
ggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcatt |
275 |
Q |
| |
|
|||||||||||| || |||||||||||||| | ||||||||||| ||||||||||||||| ||| ||||||| |
|
|
| T |
28515157 |
ggccaaagaagttggtaaggaacttaagcagtccaaacaatttagttacgtcatcgatacgacagtgtcatt |
28515086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 28176115 - 28176363
Alignment:
| Q |
1 |
attaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttg |
100 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||| ||||||||||||||||| |||||||| ||||||||||||||||||| | |||||||| ||||| |
|
|
| T |
28176115 |
attaaaagattaattgaaactggaaaggaactttcaattggactccctgctcgtcttccaggtgttgaacgttattcatcccaacactatattcctttta |
28176214 |
T |
|
| Q |
101 |
aaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactac |
200 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||| ||||||||||||||| |||| ||| ||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
28176215 |
aaagtagggaatccaaatacaaagagcttttggatgcattgaaagatgacaacaattatgtaatcgggttgaaaggaatggggggcacaggaaaaactac |
28176314 |
T |
|
| Q |
201 |
aatggccaaagaagtggggaaggaacttaagcaattcaaacaatttact |
249 |
Q |
| |
|
| ||||||||||||| || |||||||||||||| | ||||||||||||| |
|
|
| T |
28176315 |
attggccaaagaagttggtaaggaacttaagcagtccaaacaatttact |
28176363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 6 - 275
Target Start/End: Complemental strand, 17751359 - 17751090
Alignment:
| Q |
6 |
aagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttgaaagt |
105 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||||||| | |||||||| | ||| |||| |
|
|
| T |
17751359 |
aagattgattgaaactggaaaggaactttcaattggactccctgctcgtcttccagatgtagaacgttattcatcccaacactatattccctttaaaagc |
17751260 |
T |
|
| Q |
106 |
agaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactacaatgg |
205 |
Q |
| |
|
||| |||| | ||||||||||||||| ||| | ||||||||||||||| |||| ||| ||||||| ||||||||||||||||||||||||||||| ||| |
|
|
| T |
17751259 |
agagaatcaagatacaaagagcttttggattcattgaaagatgacaacaattatgtaatcgggttgaaagggatggggggcacaggaaaaactacattgg |
17751160 |
T |
|
| Q |
206 |
ccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcatt |
275 |
Q |
| |
|
| |||||||| || |||||||||||||||| |||| |||||||||||||||| ||||| ||| ||||||| |
|
|
| T |
17751159 |
caaaagaagttggtaaggaacttaagcaatccaaaaaatttacttacgtcattgatacgacaatgtcatt |
17751090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 6 - 275
Target Start/End: Complemental strand, 19052679 - 19052410
Alignment:
| Q |
6 |
aagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttgaaagt |
105 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||||||| | |||||||| | ||| |||| |
|
|
| T |
19052679 |
aagattgattgaaactggaaaggaactttcaattggactccctgctcgtcttccagatgtagaacgttattcatcccaacactatattccctttaaaagc |
19052580 |
T |
|
| Q |
106 |
agaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactacaatgg |
205 |
Q |
| |
|
||| |||| | ||||||||||||||| ||| | ||||||||||||||| |||| ||| ||||||| ||||||||||||||||||||||||||||| ||| |
|
|
| T |
19052579 |
agagaatcaagatacaaagagcttttggattcattgaaagatgacaacaattatgtaatcgggttgaaagggatggggggcacaggaaaaactacattgg |
19052480 |
T |
|
| Q |
206 |
ccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcatt |
275 |
Q |
| |
|
| |||||||| || |||||||||||||||| |||| |||||||||||||||| ||||| ||| ||||||| |
|
|
| T |
19052479 |
caaaagaagttggtaaggaacttaagcaatccaaaaaatttacttacgtcattgatacgacaatgtcatt |
19052410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 28077492 - 28077740
Alignment:
| Q |
1 |
attaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttg |
100 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||| ||||||||||||||||| |||||||| ||||||||||||||||||| | |||||||| ||||| |
|
|
| T |
28077492 |
attaaaagattaattgaaactggaaaggaactttcaattggactccctgctcgtcttccaggtgttgaacgttattcatcccaacactatattcctttta |
28077591 |
T |
|
| Q |
101 |
aaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactac |
200 |
Q |
| |
|
||||||| |||||||| ||||||||||||| ||||| ||||||||||||||| |||| ||| ||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
28077592 |
aaagtagggaatccaaacacaaagagcttttggatgcattgaaagatgacaacaattatgtaatcgggttgaaaggaatggggggcacaggaaaaactac |
28077691 |
T |
|
| Q |
201 |
aatggccaaagaagtggggaaggaacttaagcaattcaaacaatttact |
249 |
Q |
| |
|
| ||||||||||||| || |||||||||||||| | | ||||||||||| |
|
|
| T |
28077692 |
attggccaaagaagttggtaaggaacttaagcagtcccaacaatttact |
28077740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 27996699 - 27996971
Alignment:
| Q |
1 |
attaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| |||||||| | |||||||| | ||| |
|
|
| T |
27996699 |
attaaaagattgattgaaactggaaaggaactttcaattggactccctgctcctcttccaggtgttgaacgtcattcatcccaacactatattacattta |
27996798 |
T |
|
| Q |
101 |
aaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactac |
200 |
Q |
| |
|
||||||| ||||| |||||||||||||||| || || ||||||||||||||| |||| ||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
27996799 |
aaagtagggaatcccaatacaaagagcttttggaagcattgaaagatgacaacaattatgtaatcgggttgatagggatggggggcacaggaaaaactag |
27996898 |
T |
|
| Q |
201 |
aatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtca |
273 |
Q |
| |
|
|||||||| ||||||||| |||||||||| | ||| |||||||||| | | |||||| ||||| ||| ||||| |
|
|
| T |
27996899 |
aatggccatagaagtgggtaaggaacttatggaatccaaacaatttgcatgcgtcattgatacgacaatgtca |
27996971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 27950266 - 27950540
Alignment:
| Q |
1 |
attaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttg |
100 |
Q |
| |
|
||||||||||||||| || |||||||||| ||| ||||||| ||||||||| ||||||||||||||||| ||||| || || ||||||| ||||| |
|
|
| T |
27950266 |
attaaaagattgattcaatctggaaaggaactttcaattggagtccctgctcttcttccagatgttgaacaatattcgtcgcaagtctatattcattttg |
27950365 |
T |
|
| Q |
101 |
aaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactac |
200 |
Q |
| |
|
|||| || |||||||| ||||| ||||||| |||||| ||||||||||||||| |||| ||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
27950366 |
aaagcaggaaatccaactacaaccagcttttggatgctttgaaagatgacaacaattatgtaatcgggttgaaagggatggggggcacaggaaaaactat |
27950465 |
T |
|
| Q |
201 |
aatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcatt |
275 |
Q |
| |
|
||||||||||||| || |||||||||||||| | ||||||||||||| | ||||||| || ||| ||||||| |
|
|
| T |
27950466 |
gttggccaaagaagttggtaaggaacttaagcagtccaaacaatttactcaaatcatcgacacgacagtgtcatt |
27950540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 4 - 233
Target Start/End: Original strand, 27960966 - 27961195
Alignment:
| Q |
4 |
aaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttgaaa |
103 |
Q |
| |
|
|||| ||||||||||||||||||||| ||| | |||||||| ||||| | |||||||||| ||||||||||||||||| | |||||||| ||||| ||| |
|
|
| T |
27960966 |
aaaatattgattgaaactggaaaggaacttttgattggacttcctgcccatcttccagatattgaacgttattcatcccaacactatattccttttaaaa |
27961065 |
T |
|
| Q |
104 |
gtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactacaat |
203 |
Q |
| |
|
| || ||| |||||||||||||||||| ||||| |||| |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27961066 |
gcagggaattcaaatacaaagagcttttggatgcattgaatgatgacaacaactatatgactgggttgcaagggatggggggcacaggaaaaactacaat |
27961165 |
T |
|
| Q |
204 |
ggccaaagaagtggggaaggaacttaagca |
233 |
Q |
| |
|
|| ||| |||||||| ||| |||||||||| |
|
|
| T |
27961166 |
ggtcaaggaagtgggtaagaaacttaagca |
27961195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 27436767 - 27436522
Alignment:
| Q |
1 |
attaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| ||||| || || ||||| || ||||||||| |||| | |||||||| || |||||||| |||| |
|
|
| T |
27436767 |
attaaaagattgattgaaactggaaaggaactttcaattgcaccccttgctcgtcgtccagatgtagaacttcattcatcccgacactatattcatttta |
27436668 |
T |
|
| Q |
101 |
aaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactac |
200 |
Q |
| |
|
|||| || |||||||||||||||||||||| ||||| | |||||||| |||||||||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
27436667 |
aaagcagggaatccaaatacaaagagcttttggatgcattaaaagatgaagacagttatataaccgggttgtatgggatggggggcacaggaaaaactac |
27436568 |
T |
|
| Q |
201 |
aatggccaaagaagtggggaaggaacttaagcaattcaaacaattt |
246 |
Q |
| |
|
| |||||| |||||||| || | | ||||| ||| |||||||||| |
|
|
| T |
27436567 |
attggccattgaagtgggtaacgcagttaaggaatccaaacaattt |
27436522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 4 - 265
Target Start/End: Original strand, 27907886 - 27908147
Alignment:
| Q |
4 |
aaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttgaaa |
103 |
Q |
| |
|
|||||||| ||||||||||||||| | ||| ||||| ||||||||| | | ||||||||||||||||||||||||| | ||||| || |||| ||| |
|
|
| T |
27907886 |
aaaagattaattgaaactggaaagcaactttcaattgaactccctgcccgttatccagatgttgaacgttattcatcccaacactattttcattttaaaa |
27907985 |
T |
|
| Q |
104 |
gtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactacaat |
203 |
Q |
| |
|
| || ||| ||||||| | |||||| ||||| ||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||| | |
|
|
| T |
27907986 |
gcagggaattaaaatacagaatgcttttggatgcattgaaagatgacaacaattatataactggcttgcaagggatggggggcacaggaaaaactacgtt |
27908085 |
T |
|
| Q |
204 |
ggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaa |
265 |
Q |
| |
|
|||||||||||| || |||||||||||||| | ||||||||||||| | |||||||||||| |
|
|
| T |
27908086 |
ggccaaagaagttggtaaggaacttaagcagtccaaacaatttactcaaatcatcgatacaa |
27908147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 11406882 - 11407130
Alignment:
| Q |
1 |
attaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttg |
100 |
Q |
| |
|
|||||||||||||||||||||||| || | ||| ||||||| || |||||| |||||||||||||||| | |||||| || || | |||||| ||||| |
|
|
| T |
11406882 |
attaaaagattgattgaaactggagagaaactttcaattggattcactgctcgtcttccagatgttgaatgctattcacccggacagtatattccttttt |
11406981 |
T |
|
| Q |
101 |
aaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactac |
200 |
Q |
| |
|
||| ||| ||| ||||||| || ||||| | |||| ||||||||||||||| || ||||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
11406982 |
aaattagtttatcttaatacaatgatcttttagttgctttgaaagatgacaacaattttataatcgggttgcatgggatggggggcacaggaaaaactac |
11407081 |
T |
|
| Q |
201 |
aatggccaaagaagtggggaaggaacttaagcaattcaaacaatttact |
249 |
Q |
| |
|
| ||| | |||||| | | | |||||||||| | ||||||||||||| |
|
|
| T |
11407082 |
attggttattgaagtgtgtatgtaacttaagcattccaaacaatttact |
11407130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 37 - 235
Target Start/End: Original strand, 26622614 - 26622812
Alignment:
| Q |
37 |
attggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttgaaagtagaaaatccaaatacaaagagctttttgatg |
136 |
Q |
| |
|
|||| ||||||| || ||||||||||||||||||||||||||||| | || ||||||||| |||| ||| | || ||||||||||| | || |||| |
|
|
| T |
26622614 |
attgaactccctcatcgtcttccagatgttgaacgttattcatccaaaacttacatttcttttaaaagcagagagtcaaaatacaaagaattgttggatg |
26622713 |
T |
|
| Q |
137 |
ctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactacaatggccaaagaagtggggaaggaacttaagcaat |
235 |
Q |
| |
|
| || ||||||| ||||| ||||||||||| |||||||||||||||||||| | ||||||||| |||||| ||||||||| || ||||| ||||||| |
|
|
| T |
26622714 |
cactaaaagatggcaacaactatataaccggattgcaagggatggggggcactaggaaaactacattggccatagaagtgggtaaagaactaaagcaat |
26622812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 91 - 231
Target Start/End: Complemental strand, 18725274 - 18725134
Alignment:
| Q |
91 |
atttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacag |
190 |
Q |
| |
|
|||||||||||||| ||||| | |||||| |||||||||| ||||| || | |||||||| || ||||||||| | |||||||| ||||||||||||| |
|
|
| T |
18725274 |
atttcttttgaaagcagaaagttgaaatacgaagagcttttggatgcactaagagatgacagcaattatataactagattgcaaggaatggggggcacag |
18725175 |
T |
|
| Q |
191 |
gaaaaactacaatggccaaagaagtggggaaggaacttaag |
231 |
Q |
| |
|
||||||||||| |||| ||||||||||| || |||||||| |
|
|
| T |
18725174 |
gaaaaactacattggcaaaagaagtgggtaaacaacttaag |
18725134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 272
Target Start/End: Complemental strand, 27403272 - 27403116
Alignment:
| Q |
116 |
aatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactacaatggccaaagaagt |
215 |
Q |
| |
|
|||||||||| || || ||||| |||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||| |||||| | |||| |
|
|
| T |
27403272 |
aatacaaagaactgttggatgcactgaaagatgacaacaactatataaccggattgcaagggatgggtggcaccggaaaaactactttggccataaaagt |
27403173 |
T |
|
| Q |
216 |
ggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtc |
272 |
Q |
| |
|
||| || ||||| ||| ||| |||||| |||| ||||| ||||||||| |||| |
|
|
| T |
27403172 |
gggtaaagaactaaaggaatctggacaattcacttgtgtcattgatacaacagtgtc |
27403116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 18033612 - 18033527
Alignment:
| Q |
133 |
gatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactacaatggccaaagaagtggg |
218 |
Q |
| |
|
||||| |||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||| |||||| | ||||||| |
|
|
| T |
18033612 |
gatgcactgaaagatgacaacaactatataaccggattgcaagggatgggtggcaccggaaaaactactttggccataaaagtggg |
18033527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 231
Target Start/End: Original strand, 27342141 - 27342318
Alignment:
| Q |
54 |
tcttccagatgttgaacgttattcatccagagactatatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaac |
153 |
Q |
| |
|
|||||||| |||||| |||||||| || | | || ||| |||||||||| ||||| | |||||| |||| ||||| ||||| || | |||||||| | |
|
|
| T |
27342141 |
tcttccaggtgttgagcgttattcttctcaatattacattccttttgaaagcagaaacttgaaatacgaagatcttttggatgcactaagagatgacagc |
27342240 |
T |
|
| Q |
154 |
agttatataaccgggttgcaagggatggggggcacaggaaaaactacaatggccaaagaagtggggaaggaacttaag |
231 |
Q |
| |
|
| |||||| || | |||| ||| |||||||||||||||||||||||| |||| ||||||||||| || |||||||| |
|
|
| T |
27342241 |
aattatattactgcattgcgaggaatggggggcacaggaaaaactacattggcaaaagaagtgggtaaacaacttaag |
27342318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 27368533 - 27368608
Alignment:
| Q |
156 |
ttatataaccgggttgcaagggatggggggcacaggaaaaactacaatggccaaagaagtggggaaggaacttaag |
231 |
Q |
| |
|
|||||||||||| ||||| || |||||||||||||||||||||||| |||| ||||||||||| || |||||||| |
|
|
| T |
27368533 |
ttatataaccggattgcacggaatggggggcacaggaaaaactacattggcaaaagaagtgggtaaacaacttaag |
27368608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 218
Target Start/End: Original strand, 27771593 - 27771672
Alignment:
| Q |
139 |
ctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactacaatggccaaagaagtggg |
218 |
Q |
| |
|
||||||||||| |||| || ||||||||||||||||| ||||| |||| || ||||||||| | |||||||||||||| |
|
|
| T |
27771593 |
ctgaaagatgaaaacaactacataaccgggttgcaaggtatgggaggcatcggtaaaactacattagccaaagaagtggg |
27771672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 131; Significance: 5e-68; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 9332286 - 9332013
Alignment:
| Q |
1 |
attaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttg |
100 |
Q |
| |
|
|||||||||||||||||||| | |||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||| | | |||||| ||||| |
|
|
| T |
9332286 |
attaaaagattgattgaaacggtaaaggaactttcaattggactccctgctcgtcttccagatgttgaacgttattcatcccaacattatattcctttta |
9332187 |
T |
|
| Q |
101 |
aaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactac |
200 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||| ||||||| ||||||| || | ||| ||||||| ||||||||| ||||||||||||| |||| |
|
|
| T |
9332186 |
aaagtagggaatccaaatacaaagagcttttggatgcattgaaagacgacaacaattttgtaatcgggttgaaagggatggcgggcacaggaaaacctac |
9332087 |
T |
|
| Q |
201 |
aatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcatt |
275 |
Q |
| |
|
| || |||||||| | || |||||||||||||||| |||| |||||||||||||||| ||||| ||| ||||||| |
|
|
| T |
9332086 |
attgaccaaagaaattggtaaggaacttaagcaatccaaaaaatttacttacgtcat-gatacgacagtgtcatt |
9332013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 9386069 - 9385796
Alignment:
| Q |
1 |
attaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttg |
100 |
Q |
| |
|
|||||||||||||||||||| | |||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||| | | |||||| ||||| |
|
|
| T |
9386069 |
attaaaagattgattgaaacggtaaaggaactttcaattggactccctgctcgtcttccagatgttgaacgttattcatcccaacattatattcctttta |
9385970 |
T |
|
| Q |
101 |
aaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactac |
200 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||| ||||||| ||||||| || | ||| ||||||| ||||||||| ||||||||||||| |||| |
|
|
| T |
9385969 |
aaagtagggaatccaaatacaaagagcttttggatgcattgaaagacgacaacaattttgtaatcgggttgaaagggatggcgggcacaggaaaacctac |
9385870 |
T |
|
| Q |
201 |
aatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcatt |
275 |
Q |
| |
|
| || |||||||| | || |||||||||||||||| |||| |||||||||||||||| ||||| ||| ||||||| |
|
|
| T |
9385869 |
attgaccaaagaaattggtaaggaacttaagcaatccaaaaaatttacttacgtcat-gatacgacagtgtcatt |
9385796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 8696707 - 8696435
Alignment:
| Q |
1 |
attaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttg |
100 |
Q |
| |
|
||||||||||| ||||| |||||||||| ||| |||||||||||||||| |||||||| ||||||||||||||||||| | |||||||| ||||| |
|
|
| T |
8696707 |
attaaaagattaattga--ctggaaaggaactttcaattggactccctgcttgtcttccaggtgttgaacgttattcatcccaacactatattcctttta |
8696610 |
T |
|
| Q |
101 |
aaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactac |
200 |
Q |
| |
|
||| |||||||||||||||||||||| ||||| ||||||||||||||| |||| ||| ||||||| |||||||||||||||||||||||||||| |
|
|
| T |
8696609 |
gaagccaggaatccaaatacaaagagcttttggatgcattgaaagatgacaacaattatgtaatcgggttgaaagggatggggggcacaggaaaaactac |
8696510 |
T |
|
| Q |
201 |
aatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcatt |
275 |
Q |
| |
|
| ||||||||||||| || |||||||||||||||| |||||| |||||| | |||| || |||||| ||||||| |
|
|
| T |
8696509 |
attggccaaagaagttggtaaggaacttaagcaatccaaacagtttactcaaatcattgacacaacagtgtcatt |
8696435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0067 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0067
Description:
Target: scaffold0067; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 22053 - 22301
Alignment:
| Q |
1 |
attaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttg |
100 |
Q |
| |
|
|||||||||||||||||||||||| || | ||| ||||||| || |||||| |||||||||||||||| | |||||| || || | |||||| |||||| |
|
|
| T |
22053 |
attaaaagattgattgaaactggagagaaactttcaattggattcactgctcgtcttccagatgttgaatgctattcacccggacagtatattccttttg |
22152 |
T |
|
| Q |
101 |
aaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactac |
200 |
Q |
| |
|
||| ||| ||| ||||||||||||||||| |||||| ||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
22153 |
aaattagtccatcgaaatacaaagagcttttagatgctttgaaagatgacaacaattttataaccgggatgcaagggatggggggcacaggaaaaactac |
22252 |
T |
|
| Q |
201 |
aatggccaaagaagtggggaaggaacttaagcaattcaaacaatttact |
249 |
Q |
| |
|
| ||| ||| |||||| | | | |||| ||||| | ||||||||||||| |
|
|
| T |
22253 |
attggtcaaggaagtgtgtatgaaactaaagcagtccaaacaatttact |
22301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 26028653 - 26028379
Alignment:
| Q |
1 |
attaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttg |
100 |
Q |
| |
|
||||||| |||| | |||||||||||||| |||| |||||||||||||||| ||||| |||||||||||| |||||||| | |||||||||||||| |
|
|
| T |
26028653 |
attaaaaaattgttggaaactggaaaggaacttgcaattggactccctgcttatcttctagatgttgaacgatattcatctcaacactatatttctttta |
26028554 |
T |
|
| Q |
101 |
aaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactac |
200 |
Q |
| |
|
|||| ||| |||| ||||||| |||||||| ||| |||||||| ||||||| |||||||| |||||| |||||||||||||||||| |||||||||| |
|
|
| T |
26028553 |
aaagcagagaatctaaatacattgagcttttgaatgtactgaaagacgacaacaattatataatcgggttacaagggatggggggcacaagaaaaactac |
26028454 |
T |
|
| Q |
201 |
aatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcatt |
275 |
Q |
| |
|
||||| ||| || ||||| ||| |||| ||||| | ||| ||||||||| | ||||||| || ||| ||||||| |
|
|
| T |
26028453 |
aatggtcaaggaggtgggtaagaaactaaagcagtccaaccaatttactcaaatcatcgacacgacaatgtcatt |
26028379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0912 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0912
Description:
Target: scaffold0912; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 231
Target Start/End: Complemental strand, 1039 - 862
Alignment:
| Q |
54 |
tcttccagatgttgaacgttattcatccagagactatatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaac |
153 |
Q |
| |
|
|||||||| |||||| |||||||| || ||| || |||||||||||||| ||||| | ||||||||||||||||| ||||| || | |||||||||| |
|
|
| T |
1039 |
tcttccaggtgttgagcgttattcttctcaagattacatttcttttgaaagcagaaagttgaaatacaaagagcttttagatgcactaagagatgacaac |
940 |
T |
|
| Q |
154 |
agttatataaccgggttgcaagggatggggggcacaggaaaaactacaatggccaaagaagtggggaaggaacttaag |
231 |
Q |
| |
|
| |||| || | || |||||||| |||||||||||||||||||||||| |||| ||||||||||| || |||||||| |
|
|
| T |
939 |
aattatttatctggattgcaaggaatggggggcacaggaaaaactacattggcaaaagaagtgggtaaacaacttaag |
862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0043 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0043
Description:
Target: scaffold0043; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 231
Target Start/End: Complemental strand, 75120 - 74943
Alignment:
| Q |
54 |
tcttccagatgttgaacgttattcatccagagactatatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaac |
153 |
Q |
| |
|
|||||||| |||||| |||||||| || | | || |||||||||||||||||||| | |||||| |||||||||| ||||| || | |||||||||| |
|
|
| T |
75120 |
tcttccaggtgttgagcgttattcttctcaatattacatttcttttgaaagtagaaagttgaaatacgaagagcttttggatgcactaagagatgacaac |
75021 |
T |
|
| Q |
154 |
agttatataaccgggttgcaagggatggggggcacaggaaaaactacaatggccaaagaagtggggaaggaacttaag |
231 |
Q |
| |
|
| |||||| || || |||||||| |||||||||||||||||||||||| |||| ||||||||||| || |||||||| |
|
|
| T |
75020 |
aattatattactggattgcaaggaatggggggcacaggaaaaactacattggcaaaagaagtgggtaaacaacttaag |
74943 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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