View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14257_low_8 (Length: 382)
Name: NF14257_low_8
Description: NF14257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14257_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 9 - 364
Target Start/End: Original strand, 44487975 - 44488341
Alignment:
| Q |
9 |
gtagcaaaggaagcagaacacccaccaaataaaacctgcagctcttccttttgaaaaacttttgaagtatattaaaaacaacagcaaagaataaatatat |
108 |
Q |
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| T |
44487975 |
gtagcaaaggaagcagaacacccaccaaataaaacctgcagctcttccttttgaaaaacttttgaagtatattaaaaacaacagcaaagaataaatatat |
44488074 |
T |
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| Q |
109 |
caaataattttggtcttcaatcagcatcaa-----------tatgtagtcctttattcatcgttcctcttgtgttctctaattaaaagttgtaagttcac |
197 |
Q |
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| T |
44488075 |
caaataattttggtcttcaatcagcatcaattaatcctcaatatgtagtcctttattcatcgttcctcttgtgttctctaattaaaagttgtaagttcac |
44488174 |
T |
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| Q |
198 |
gaatataaggaactcccatttgaggcaaccaaacattcccctgcagaaaattatcaaccgtaaaatttgaagcatctgtagcattaatcacatggtaccc |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44488175 |
gaatataaggaactcccatttgaggcaaccaaacattcccctgcagaaaattgtcaaccgtaaaatttgaagcatctgtagcattaatcacatggtaccc |
44488274 |
T |
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| Q |
298 |
tggccatgtaactctattagaagtgtctgcaccaggtcctctattatcaaactctgcataatacaac |
364 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44488275 |
tggccatgtaactctattagaagtgtctgcaccaggtcctctattatcaaactctgcataatacaac |
44488341 |
T |
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