View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14258_high_18 (Length: 364)
Name: NF14258_high_18
Description: NF14258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14258_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 65 - 346
Target Start/End: Complemental strand, 36374124 - 36373842
Alignment:
| Q |
65 |
aaccatgacgtttctagaataaaacatctcaattgaagttgtgtaagaattttactacattattgcattgtaagatccattctaaaataaaaatcttaaa |
164 |
Q |
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| T |
36374124 |
aaccatgacgtttctagaataaaacatctcaattgaagttgtgtaagagttttactacattgttgcattgtaagatccattctaaaattacaatcttaaa |
36374025 |
T |
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| Q |
165 |
tatgatagaagtcatttcaacaactatgatactacgattacttaaaaaacatagagacaaaaaaggaaaagggagaaatgactc--aaatgcttcaagca |
262 |
Q |
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|||||||||||||| |||| |||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |
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| T |
36374024 |
tatgatagaagtca-ttcaccaaccatgatactacgatcacttaaaaaacatagagacaaaaaagaaaaagggagaaatgactcataaatgcttcaagca |
36373926 |
T |
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| Q |
263 |
gaatttgatatctataaagttgatgactatccaaggtgtgaaagttatcaaatgtgcagctctttcaagcacgaatggaaaatt |
346 |
Q |
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| T |
36373925 |
gactttgatatctataaagttgatgactatccaaggtgtgaaagttatcaaatgtgcagctctttcaagcaccaatggaaaatt |
36373842 |
T |
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