View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14258_low_1 (Length: 930)

Name: NF14258_low_1
Description: NF14258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14258_low_1
NF14258_low_1
[»] chr7 (43 HSPs)
chr7 (397-914)||(49009588-49010105)
chr7 (153-398)||(49010175-49010420)
chr7 (167-392)||(43183964-43184188)
chr7 (167-392)||(3113616-3113840)
chr7 (167-392)||(5555911-5556135)
chr7 (167-392)||(33686010-33686234)
chr7 (161-392)||(14776594-14776825)
chr7 (167-392)||(8867227-8867451)
chr7 (167-392)||(40919517-40919741)
chr7 (228-392)||(7003172-7003336)
chr7 (228-392)||(7049043-7049207)
chr7 (228-390)||(11020585-11020747)
chr7 (228-390)||(34388636-34388798)
chr7 (167-392)||(36631265-36631488)
chr7 (167-368)||(38637878-38638078)
chr7 (229-393)||(20606071-20606235)
chr7 (167-392)||(8394574-8394797)
chr7 (167-392)||(26625193-26625416)
chr7 (236-394)||(13072424-13072582)
chr7 (214-393)||(20609364-20609542)
chr7 (95-154)||(29706877-29706936)
chr7 (236-393)||(20611853-20612010)
chr7 (167-335)||(37001736-37001903)
chr7 (167-392)||(36658626-36658839)
chr7 (164-393)||(23582414-23582642)
chr7 (299-388)||(45709965-45710054)
chr7 (99-153)||(29701543-29701597)
chr7 (153-244)||(8722827-8722917)
chr7 (297-390)||(32199136-32199229)
chr7 (304-392)||(33387046-33387134)
chr7 (194-398)||(12224506-12224705)
chr7 (91-153)||(31894257-31894319)
chr7 (91-160)||(44307603-44307672)
chr7 (164-264)||(31252295-31252394)
chr7 (331-398)||(8725240-8725307)
chr7 (18-61)||(29706738-29706781)
chr7 (91-153)||(31894539-31894601)
chr7 (91-152)||(1511190-1511251)
chr7 (310-390)||(21634432-21634512)
chr7 (296-376)||(28837412-28837491)
chr7 (95-158)||(1511475-1511538)
chr7 (95-154)||(10878623-10878682)
chr7 (95-157)||(28408529-28408591)
[»] chr8 (40 HSPs)
chr8 (164-392)||(9175581-9175808)
chr8 (167-392)||(42231384-42231608)
chr8 (167-392)||(3648288-3648512)
chr8 (167-392)||(9877667-9877891)
chr8 (167-392)||(378871-379094)
chr8 (167-392)||(2728689-2728913)
chr8 (167-392)||(16787521-16787745)
chr8 (175-392)||(34136305-34136521)
chr8 (228-392)||(4404455-4404619)
chr8 (161-392)||(39914963-39915194)
chr8 (228-382)||(7278480-7278634)
chr8 (165-392)||(19034-19262)
chr8 (167-392)||(23402555-23402779)
chr8 (228-392)||(29727938-29728100)
chr8 (249-392)||(40470118-40470261)
chr8 (166-390)||(40401001-40401224)
chr8 (155-394)||(29351807-29352045)
chr8 (166-393)||(32539972-32540185)
chr8 (95-155)||(14161495-14161555)
chr8 (167-359)||(3435726-3435917)
chr8 (310-392)||(15838734-15838816)
chr8 (229-390)||(35852495-35852656)
chr8 (99-153)||(14156163-14156217)
chr8 (228-370)||(32964064-32964206)
chr8 (197-390)||(15541743-15541935)
chr8 (301-367)||(36409020-36409086)
chr8 (153-368)||(29892039-29892250)
chr8 (91-160)||(20178363-20178432)
chr8 (91-160)||(20223091-20223160)
chr8 (194-323)||(33639154-33639282)
chr8 (18-61)||(14161354-14161397)
chr8 (325-388)||(32750371-32750434)
chr8 (311-392)||(3672247-3672327)
chr8 (95-158)||(14577154-14577217)
chr8 (331-382)||(15863285-15863336)
chr8 (167-313)||(17479956-17480101)
chr8 (94-156)||(30928309-30928371)
chr8 (95-157)||(35482990-35483052)
chr8 (93-150)||(17844167-17844224)
chr8 (95-152)||(30928601-30928658)
[»] chr1 (26 HSPs)
chr1 (161-392)||(41971746-41971977)
chr1 (161-392)||(3829430-3829659)
chr1 (167-392)||(11957845-11958069)
chr1 (167-390)||(35907977-35908199)
chr1 (167-392)||(17445741-17445965)
chr1 (228-392)||(7433869-7434033)
chr1 (228-392)||(42310495-42310659)
chr1 (167-392)||(32981551-32981775)
chr1 (228-391)||(23313443-23313606)
chr1 (249-392)||(33490153-33490296)
chr1 (193-391)||(28463396-28463582)
chr1 (248-390)||(32944357-32944499)
chr1 (236-370)||(5715373-5715507)
chr1 (269-344)||(7350228-7350303)
chr1 (331-393)||(33774629-33774691)
chr1 (248-389)||(18716322-18716463)
chr1 (228-391)||(3604699-3604863)
chr1 (95-155)||(12115240-12115300)
chr1 (228-323)||(42412370-42412464)
chr1 (161-370)||(17744594-17744802)
chr1 (91-154)||(7113863-7113926)
chr1 (95-158)||(19897170-19897233)
chr1 (98-153)||(40290073-40290128)
chr1 (351-393)||(9901670-9901712)
chr1 (95-157)||(17611713-17611775)
chr1 (91-157)||(25780173-25780239)
[»] chr4 (55 HSPs)
chr4 (167-392)||(3292392-3292616)
chr4 (167-392)||(28876810-28877034)
chr4 (167-392)||(6235957-6236181)
chr4 (167-392)||(6689731-6689955)
chr4 (196-392)||(29995507-29995703)
chr4 (167-392)||(43143080-43143304)
chr4 (161-392)||(20129762-20129993)
chr4 (161-392)||(26438766-26438997)
chr4 (161-392)||(34406771-34407002)
chr4 (161-392)||(43356353-43356584)
chr4 (161-392)||(47501222-47501453)
chr4 (167-390)||(33135940-33136162)
chr4 (167-392)||(42333270-42333495)
chr4 (228-392)||(10352439-10352604)
chr4 (167-392)||(25931157-25931381)
chr4 (167-392)||(35546400-35546623)
chr4 (161-392)||(13012637-13012868)
chr4 (167-392)||(17510723-17510951)
chr4 (161-392)||(36381836-36382065)
chr4 (167-392)||(48989776-48990000)
chr4 (228-392)||(30077191-30077356)
chr4 (199-392)||(48130425-48130617)
chr4 (193-391)||(29134152-29134349)
chr4 (167-392)||(30110410-30110634)
chr4 (228-392)||(30216301-30216462)
chr4 (256-392)||(40529464-40529600)
chr4 (301-390)||(13394870-13394959)
chr4 (228-392)||(50204643-50204797)
chr4 (229-393)||(9415345-9415509)
chr4 (230-393)||(4038262-4038425)
chr4 (166-377)||(13502113-13502322)
chr4 (229-391)||(26546856-26547017)
chr4 (304-393)||(29094594-29094683)
chr4 (180-393)||(31853673-31853885)
chr4 (193-393)||(56225750-56225950)
chr4 (301-392)||(1818164-1818256)
chr4 (167-286)||(13390943-13391061)
chr4 (95-158)||(21360451-21360514)
chr4 (91-158)||(30055488-30055555)
chr4 (172-346)||(49062453-49062626)
chr4 (310-393)||(5290887-5290970)
chr4 (164-391)||(20629019-20629245)
chr4 (353-392)||(26448499-26448538)
chr4 (310-389)||(54933459-54933538)
chr4 (167-281)||(44157182-44157295)
chr4 (228-389)||(9070730-9070891)
chr4 (95-151)||(30799612-30799668)
chr4 (270-393)||(2941119-2941242)
chr4 (161-264)||(26449291-26449393)
chr4 (95-158)||(37872761-37872824)
chr4 (228-275)||(40529651-40529698)
chr4 (91-158)||(46143555-46143622)
chr4 (95-157)||(13294891-13294953)
chr4 (95-153)||(25297679-25297737)
chr4 (340-389)||(18625554-18625603)
[»] chr3 (37 HSPs)
chr3 (167-392)||(40081235-40081459)
chr3 (167-392)||(6930389-6930613)
chr3 (161-392)||(6268913-6269144)
chr3 (161-392)||(22967931-22968162)
chr3 (196-392)||(27935624-27935818)
chr3 (167-392)||(5135735-5135959)
chr3 (167-392)||(45183428-45183651)
chr3 (161-392)||(39772239-39772470)
chr3 (167-392)||(6503065-6503289)
chr3 (228-392)||(19390595-19390760)
chr3 (228-392)||(19565056-19565221)
chr3 (197-388)||(29564674-29564868)
chr3 (167-392)||(34083615-34083838)
chr3 (228-392)||(45336320-45336485)
chr3 (228-392)||(33041400-33041561)
chr3 (164-275)||(8257407-8257517)
chr3 (167-362)||(11017765-11017959)
chr3 (228-387)||(27912456-27912615)
chr3 (255-393)||(35937668-35937806)
chr3 (319-398)||(38282857-38282936)
chr3 (310-392)||(8257275-8257357)
chr3 (337-398)||(38415473-38415534)
chr3 (95-154)||(52091714-52091773)
chr3 (248-390)||(7468757-7468899)
chr3 (95-153)||(52090881-52090939)
chr3 (153-250)||(3159292-3159388)
chr3 (91-156)||(3612591-3612656)
chr3 (312-393)||(19814766-19814847)
chr3 (257-385)||(219189-219317)
chr3 (95-158)||(5048383-5048446)
chr3 (164-211)||(16094646-16094693)
chr3 (94-157)||(44506331-44506394)
chr3 (236-374)||(10842155-10842293)
chr3 (91-153)||(17574372-17574434)
chr3 (91-157)||(22975629-22975695)
chr3 (356-398)||(40368673-40368715)
chr3 (296-393)||(5177323-5177420)
[»] chr2 (35 HSPs)
chr2 (167-392)||(45419030-45419254)
chr2 (153-390)||(7072016-7072252)
chr2 (161-392)||(17444528-17444759)
chr2 (228-392)||(31581175-31581339)
chr2 (161-392)||(41251121-41251352)
chr2 (167-392)||(35963139-35963363)
chr2 (161-392)||(6403291-6403522)
chr2 (228-392)||(12756393-12756557)
chr2 (228-392)||(18982038-18982202)
chr2 (167-390)||(4554689-4554910)
chr2 (167-390)||(32126683-32126905)
chr2 (228-392)||(2957700-2957864)
chr2 (167-392)||(2286237-2286460)
chr2 (167-392)||(26162198-26162422)
chr2 (229-393)||(37621618-37621782)
chr2 (164-386)||(26591496-26591716)
chr2 (177-387)||(18829309-18829518)
chr2 (249-390)||(26238390-26238531)
chr2 (228-392)||(42442433-42442597)
chr2 (256-392)||(44084185-44084321)
chr2 (196-353)||(45121695-45121851)
chr2 (276-392)||(21556543-21556659)
chr2 (228-392)||(816613-816777)
chr2 (229-392)||(17373394-17373558)
chr2 (199-392)||(8058871-8059052)
chr2 (250-394)||(25391425-25391568)
chr2 (320-392)||(15441832-15441904)
chr2 (95-154)||(8322471-8322530)
chr2 (95-158)||(27360410-27360473)
chr2 (238-392)||(37226501-37226654)
chr2 (95-155)||(30337717-30337777)
chr2 (339-393)||(3843980-3844034)
chr2 (95-153)||(17846007-17846065)
chr2 (359-392)||(8147799-8147832)
chr2 (95-152)||(30337424-30337481)
[»] chr6 (23 HSPs)
chr6 (167-392)||(28997177-28997401)
chr6 (167-390)||(34948277-34948499)
chr6 (161-392)||(399066-399297)
chr6 (228-392)||(33228891-33229056)
chr6 (228-392)||(29743731-29743896)
chr6 (164-398)||(28931450-28931683)
chr6 (167-392)||(13838245-13838472)
chr6 (164-393)||(10231747-10231975)
chr6 (166-316)||(23217452-23217600)
chr6 (95-152)||(21424643-21424700)
chr6 (236-398)||(31373247-31373409)
chr6 (99-155)||(21419308-21419364)
chr6 (341-392)||(18339541-18339592)
chr6 (239-393)||(12098436-12098590)
chr6 (239-393)||(12849947-12850101)
chr6 (18-63)||(21424504-21424549)
chr6 (95-152)||(10026140-10026197)
chr6 (299-390)||(22814710-22814801)
chr6 (337-398)||(4335187-4335248)
chr6 (95-155)||(10027124-10027184)
chr6 (161-393)||(11796942-11797172)
chr6 (304-370)||(4335252-4335318)
chr6 (95-157)||(33595608-33595670)
[»] chr5 (46 HSPs)
chr5 (167-392)||(15959441-15959665)
chr5 (167-392)||(31680814-31681038)
chr5 (167-392)||(33430768-33430992)
chr5 (229-393)||(192353-192517)
chr5 (228-387)||(23034427-23034586)
chr5 (167-392)||(13818426-13818650)
chr5 (167-392)||(31501214-31501438)
chr5 (161-390)||(26282805-26283034)
chr5 (167-392)||(39657022-39657249)
chr5 (228-392)||(31271854-31272018)
chr5 (161-392)||(36293108-36293339)
chr5 (167-392)||(1775871-1776094)
chr5 (167-392)||(16333395-16333619)
chr5 (248-392)||(10034351-10034495)
chr5 (228-392)||(12278412-12278576)
chr5 (195-393)||(38268944-38269130)
chr5 (228-390)||(37255054-37255216)
chr5 (167-392)||(17332115-17332339)
chr5 (161-392)||(39435145-39435376)
chr5 (228-392)||(36291818-36291982)
chr5 (228-367)||(43069329-43069468)
chr5 (153-392)||(16155446-16155683)
chr5 (324-393)||(30297604-30297673)
chr5 (228-393)||(27750683-27750846)
chr5 (271-393)||(11779160-11779282)
chr5 (164-362)||(24792894-24793096)
chr5 (228-377)||(18266162-18266315)
chr5 (249-328)||(28801712-28801791)
chr5 (204-393)||(8788264-8788452)
chr5 (294-383)||(23034262-23034351)
chr5 (296-393)||(35911354-35911451)
chr5 (298-398)||(35338308-35338408)
chr5 (310-393)||(20368490-20368573)
chr5 (193-311)||(30297492-30297606)
chr5 (337-389)||(33094355-33094407)
chr5 (95-163)||(35362206-35362274)
chr5 (310-393)||(20363128-20363211)
chr5 (229-391)||(30922486-30922648)
chr5 (95-152)||(27843023-27843080)
chr5 (266-387)||(1050533-1050650)
chr5 (95-154)||(15179078-15179137)
chr5 (338-389)||(22761177-22761228)
chr5 (95-154)||(32994443-32994502)
chr5 (95-153)||(32458075-32458133)
chr5 (95-157)||(35363278-35363340)
chr5 (95-152)||(19558161-19558218)
[»] scaffold0041 (1 HSPs)
scaffold0041 (167-392)||(53354-53578)
[»] scaffold0002 (2 HSPs)
scaffold0002 (161-392)||(479944-480175)
scaffold0002 (95-155)||(330194-330254)
[»] scaffold0134 (1 HSPs)
scaffold0134 (166-393)||(17754-17978)
[»] scaffold0069 (1 HSPs)
scaffold0069 (161-387)||(18012-18238)
[»] scaffold0495 (1 HSPs)
scaffold0495 (164-393)||(8467-8695)
[»] scaffold0166 (1 HSPs)
scaffold0166 (164-362)||(35277-35479)
[»] scaffold0831 (1 HSPs)
scaffold0831 (194-334)||(3383-3521)
[»] scaffold0311 (1 HSPs)
scaffold0311 (95-155)||(12885-12945)
[»] scaffold0029 (1 HSPs)
scaffold0029 (95-155)||(136913-136973)
[»] scaffold0347 (2 HSPs)
scaffold0347 (91-152)||(11940-12001)
scaffold0347 (96-153)||(12223-12280)


Alignment Details
Target: chr7 (Bit Score: 498; Significance: 0; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 498; E-Value: 0
Query Start/End: Original strand, 397 - 914
Target Start/End: Complemental strand, 49010105 - 49009588
Alignment:
Q  397 atcttaaacatgtctagaaaacaaataattcaacctcgcctatcattgattaaagcagcgaataaaaaatcttggtctctagaaatttctttttgcaaac 496  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49010105 atcttaaacatgtctagaaaataaataattcaacctcgcctatcattgattaaagcagcgaataaaaaatcttggtctctagaaatttctttttgcaaac 49010006  T
Q  497 attcacatcttacaataaaacaatattgtacatagtatagtatagcatcatatttctctgaagacaatcaattgatggctctctaagattaatggcaatg 596  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  49010005 attcatatcttacaataaaacaatattgtacatagtatagtatagcatcatatttctctgaagacaattaattgatggctctctaagattaatggcaatg 49009906  T
Q  597 ctattaacctacttgtcaatatccatgttgttgttttggatttcatttgcaatggtaaatttcacatccacaatttaattgctcaaaagtctccgaacat 696  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49009905 ctattaacctacttgtcaatatccatgttgttgttttggatttcatttgcaatggtaaatttcacatccacaatttaattgctcaaaagtctccgaacat 49009806  T
Q  697 agcctagaaaatgcacgaccatatccttcctaattctactcaaaatgactctatttattggaagcattttgaatcaaatttgttcatctttaaaaatgtt 796  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49009805 agcctagaaaatgcacgaccatatccttcctaattctactcaaaatgactctatttattggaagcattttgaatcaaatttgttcatctttaaaaatgtt 49009706  T
Q  797 tttggttatttgaatcaaccttatttgttggcctcctttgtttttacacgctttcaagagttctcttattgttccttagagccccagaagcaggaggcaa 896  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  49009705 tttggttatttgaatcaaccttatttgttggcctcctttgtttttacacgctttcaagagttctcttattgttccttagagccctagaagcaggaggcaa 49009606  T
Q  897 aattgcatatgtttaaca 914  Q
    ||||| ||||||||||||    
T  49009605 aattgaatatgtttaaca 49009588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 153 - 398
Target Start/End: Complemental strand, 49010420 - 49010175
Alignment:
Q  153 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaa 252  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||    
T  49010420 taaaaacgatttgcaaagttttatagcatttcaatgacgattctatttatttttatttttaaacaaaaacgtgcaaaaattgaaattttgttcctaataa 49010321  T
Q  253 gcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagag 352  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  49010320 gcgtatactcacaggtcaaatttcgttccctaattttataagcatggttagaacataataagaatcttcacaatgaagttttgcaatttttaaacgagag 49010221  T
Q  353 acaaattaattataaattgtttaagtaattcataattatggaaaat 398  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  49010220 acaaattaattataaattgtttaagaaattcataattatggaaaat 49010175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 43183964 - 43184188
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  43183964 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 43184062  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  43184063 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 43184162  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  43184163 aattgtttaagaaattcataattatg 43184188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 3113616 - 3113840
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| ||||||| || | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  3113616 aaagtttcatagcatatcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 3113714  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| | ||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  3113715 gtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 3113814  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  3113815 aattgtttaagaaattcataattatg 3113840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 5556135 - 5555911
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| ||| ||| |||| | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  5556135 aaagtttcataacatatcaaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 5556037  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| | ||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  5556036 gtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 5555937  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  5555936 aattgtttaagaaattcataattatg 5555911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 33686234 - 33686010
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||  | | || || |||||||||| |||||  ||| ||||  ||||||| || ||||||||||||  ||||||||||||||||      
T  33686234 aaagtttcatagcattttgaagtcgtttaaatttattttgatttttcaaccaaaacatgcaaaa-ttaaaattttgttccgcgtaagcgtatactcacaa 33686136  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||| | || || |||||  |||||||| ||||||||||||||||| || ||||| ||||||||||||||| ||||||||||||||    
T  33686135 gtcaaatttagttccctacttttgtaggcatgactagaacatgataagaatcttcacaataaaattttgtagtttttaaacgagatacaaattaattata 33686036  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  33686035 aattgtttaagaaattcataattatg 33686010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 161 - 392
Target Start/End: Original strand, 14776594 - 14776825
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||||| | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  14776594 atttgtaaagtttcatagcatttcaaagtcgtttaaatttattttaatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 14776692  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
    ||||  ||||||||| |||||||||| || || |||||  ||||| || ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  14776693 tcacaagtcaaatttagttccctaattttgtaggcatgactagaatatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 14776792  T
Q  360 aattataaattgtttaagtaattcataattatg 392  Q
    |||||||||||||||||| ||||||||||||||    
T  14776793 aattataaattgtttaagaaattcataattatg 14776825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 8867227 - 8867451
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || |  |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  8867227 aaagtttcatagcatttcgaagtcgttaaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 8867325  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| ||||||| ||| ||||||||||||||    
T  8867326 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaacaagatacaaattaattata 8867425  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  8867426 aattgtttaagaaattcataattatg 8867451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 40919517 - 40919741
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||      
T  40919517 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaa 40919615  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  40919616 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 40919715  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  40919716 aattgtttaagaaattcataattatg 40919741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 228 - 392
Target Start/End: Complemental strand, 7003336 - 7003172
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||  ||||||||||||| ||  ||||| ||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  7003336 aaaattgaaattttgttccgtgtaagcgtatactaacaagtcaagtttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 7003237  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    || ||||| ||| ||||||||| | ||||||||||||||||||||||||| ||||||||||||||    
T  7003236 aaattttgtagtctttaaacgatatacaaattaattataaattgtttaagaaattcataattatg 7003172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 228 - 392
Target Start/End: Complemental strand, 7049207 - 7049043
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||  ||||||||||||| ||  ||||| ||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  7049207 aaaattgaaattttgttccgtgtaagcgtatactaacaagtcaagtttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 7049108  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    || ||||| ||| ||||||||| | ||||||||||||||||||||||||| ||||||||||||||    
T  7049107 aaattttgtagtctttaaacgatatacaaattaattataaattgtttaagaaattcataattatg 7049043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 228 - 390
Target Start/End: Original strand, 11020585 - 11020747
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||  ||||||||||| |||   ||||||||| ||||||||||||| || |||||  ||||  || ||||||| |||||||| |    
T  11020585 aaaattgaaattttgttccgcgtaagcgtataatcataagtcaaatttagttccctaatcttgtaggcatgactagacaatgataagaaccttcacaacg 11020684  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 390  Q
    || ||||| ||||||||||||||| ||||||||||||||||||||||||| |||| |||||||    
T  11020685 aaattttggagtttttaaacgagatacaaattaattataaattgtttaagaaatttataatta 11020747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 228 - 390
Target Start/End: Original strand, 34388636 - 34388798
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||  |||||| |||| ||||  ||||||||| |||||||||| || || |||||  | |||||| ||||||| ||||||| ||    
T  34388636 aaaattgaaattttgttccgcgtaagcatatattcacaagtcaaatttagttccctaattttgtaggcatgactggaacatgataagaaccttcacagtg 34388735  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 390  Q
    || ||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  34388736 aaattttgtagtctttaaacgagatacaaattaattataaattgtttaagaaattcataatta 34388798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 36631488 - 36631265
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  36631488 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 36631390  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    | ||||||| |||| ||||| || || |||||  |||||||| |||||||  ||||||||||| ||||| | ||||||||||||| |||| ||||||||     
T  36631389 g-caaatttagttctctaattttgtaggcatgactagaacatgataagaactttcacaatgaaattttgtaatttttaaacgagatacaatttaattatc 36631291  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  36631290 aattgtttaagaaattcataattatg 36631265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 167 - 368
Target Start/End: Original strand, 38637878 - 38638078
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  38637878 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 38637976  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  38637977 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaatttttgtagtctttaaacgagatacaaattaattata 38638076  T
Q  367 aa 368  Q
    ||    
T  38638077 aa 38638078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 229 - 393
Target Start/End: Complemental strand, 20606235 - 20606071
Alignment:
Q  229 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 328  Q
    |||||| ||||||||||| ||||||| |||||| || | ||||||||||||   ||||  | || ||||||||||||||| ||||||| |||||| ||||    
T  20606235 aaattgcaattttgttccgagtaagcatatactgacggatcaaatttcgttatataattctgtaggcatggttagaacatgataagaaccttcaccatga 20606136  T
Q  329 agttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    | ||||| |||||||||| |||| ||||||||||||| ||||||||||| |||||||||||||||    
T  20606135 aattttgaagtttttaaatgagatacaaattaattatgaattgtttaagaaattcataattatgg 20606071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 8394797 - 8394574
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||| ||| |||||||||||||||  ||||||||||||||||      
T  8394797 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgccaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 8394699  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    |  |||||| |||||||||| || || |||||  |||||||| ||||||| |||||| ||||| ||||| | |||||||| |||| | ||||||||||||    
T  8394698 ga-aaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacgatgaaattttgtaatttttaaatgagatataaattaattata 8394600  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  8394599 aattgtttaagaaattcataattatg 8394574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 26625416 - 26625193
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | |  | || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  26625416 aaagtttcatagcatttcgaagttgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 26625318  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    || |||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| |||||| |||| ||||||||||||||    
T  26625317 gttaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaatgagatacaaattaattata 26625218  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    |||||||| ||  |||||||||||||    
T  26625217 aattgttt-agagattcataattatg 26625193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 236 - 394
Target Start/End: Original strand, 13072424 - 13072582
Alignment:
Q  236 aattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 335  Q
    ||||||||||  ||||||||||||||||| |||||||||| |||| ||||| ||  | | ||| |||||| || ||||||| |||||| ||||| |||||    
T  13072424 aattttgttcagagtaagcgtatactcacgggtcaaattttgttctctaattttggaggtatgtttagaatatcataagaaccttcaccatgaaattttg 13072523  T
Q  336 cagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgga 394  Q
     || |||||||||||| || |||||||||| ||||||||||| ||||||||||||||||    
T  13072524 gagattttaaacgagatactaattaattatgaattgtttaagaaattcataattatgga 13072582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 214 - 393
Target Start/End: Complemental strand, 20609542 - 20609364
Alignment:
Q  214 aacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataa 313  Q
    |||||||| |||||||| | | |||||| |||| | ||||||||||||||| ||||||||| ||||   ||||  | || ||||||||||||||  ||||    
T  20609542 aacaaaaacgtgcaaaa-tagcaatttttttccgaataagcgtatactcacgggtcaaattccgttatataattctgtaggcatggttagaacaagataa 20609444  T
Q  314 gaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    ||| |||||| ||| | ||||| || ||||||| |||| ||||||||||||| ||| ||||||| |||||||||||||||    
T  20609443 gaaccttcaccatgcaattttgaagattttaaatgagatacaaattaattatgaatagtttaagaaattcataattatgg 20609364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 29706877 - 29706936
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29706877 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 29706936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 236 - 393
Target Start/End: Complemental strand, 20612010 - 20611853
Alignment:
Q  236 aattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 335  Q
    |||||| |||| |||||||||||||||||  |||||||| ||||   ||||  | || |||| |||||||||| ||||||| |||||| ||| | |||||    
T  20612010 aatttttttccgagtaagcgtatactcacgcgtcaaattccgttatataattctgtaggcatagttagaacatgataagaaccttcaccatgcaattttg 20611911  T
Q  336 cagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
     || ||||||| |||| ||||||||||||| ||| ||||||| |||||||||||||||    
T  20611910 aagattttaaatgagatacaaattaattatgaatagtttaagaaattcataattatgg 20611853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 167 - 335
Target Start/End: Original strand, 37001736 - 37001903
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  37001736 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaatgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 37001834  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 335  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| |||||    
T  37001835 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttg 37001903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 36658839 - 36658626
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  36658839 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 36658741  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    || ||||||  |||||||||  | || ||| |  ||||||           ||||||||| || ||||| ||| ||||||||||| ||||||||||||||    
T  36658740 gtgaaatttaattccctaattctgtaggcaagactagaac-----------cttcacaataaaattttgtagtctttaaacgagatacaaattaattata 36658652  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  36658651 aattgtttaagaaattcataattatg 36658626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 164 - 393
Target Start/End: Complemental strand, 23582642 - 23582414
Alignment:
Q  164 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 263  Q
    ||||||||||| ||||| ||||| |||  ||| ||||||||| |||||  ||| ||||  ||| ||| ||| ||||||||||| |||||| ||||| |||    
T  23582642 tgcaaagttttgtagcaattcaaagacatttctatttattttaatttttcaactaaaacttgctaaa-ttgcaattttgttccgagtaagagtataatca 23582544  T
Q  264 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 363  Q
    | |||||||||| |||  ||||| || || ||||||||||||||| |||| ||  |||||  |||| ||| | |||||||||| |||| |  ||||||||    
T  23582543 cgggtcaaattttgttatctaattttttaggcatggttagaacatcataataacattcaccgtgaaatttggtagtttttaaatgagatatgaattaatt 23582444  T
Q  364 ataaattgtttaagtaattcataattatgg 393  Q
    || | || || ||| |||||||| ||||||    
T  23582443 atgactttttaaagaaattcatagttatgg 23582414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 299 - 388
Target Start/End: Complemental strand, 45710054 - 45709965
Alignment:
Q  299 gttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataat 388  Q
    |||||||||| |||||||||||||| ||||| ||||  ||||||| |||||| ||  |||||||||||||||||||||||||||| ||||    
T  45710054 gttagaacattataagaatcttcaccatgaaattttagagtttttgaacgagggaagaattaattataaattgtttaagtaattcttaat 45709965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 99 - 153
Target Start/End: Complemental strand, 29701597 - 29701543
Alignment:
Q  99 aggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 153  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  29701597 aggacgaaaacgttacctaaaaataagttataggaccatttgtgtaattttgcct 29701543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 8722827 - 8722917
Alignment:
Q  153 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgtt 244  Q
    |||||| |||||||||||||| |||||||||| |  |||||||||||||||||||||||  ||| |||  |||| |||||||||||||||||    
T  8722827 taaaaataatttgcaaagtttcatagcatttcgaatacgattcaatttatttttatttttcaaccaaaccgtgc-aaaattgaaattttgtt 8722917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 390
Target Start/End: Complemental strand, 32199229 - 32199136
Alignment:
Q  297 tggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 390  Q
    |||||| |||||  |||||||||||||  || | ||||  |||||||||||||||||||||||||||| |||||||||| | ||||| ||||||    
T  32199229 tggttataacatcgtaagaatcttcaccgtggaattttatagtttttaaacgagagacaaattaattaaaaattgtttatgaaattcttaatta 32199136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 304 - 392
Target Start/End: Complemental strand, 33387134 - 33387046
Alignment:
Q  304 aacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    |||||||||| ||  ||||| ||||| ||||  ||||||| |||||| || ||||||||||| ||||||||||| ||||||||||||||    
T  33387134 aacataataataactttcaccatgaaatttttgagtttttgaacgagtgataaattaattatgaattgtttaagaaattcataattatg 33387046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 398
Target Start/End: Original strand, 12224506 - 12224705
Alignment:
Q  194 tcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataa 293  Q
    |||||| ||||| |||||  ||| |||| |||||||| ||| |||||||||   ||||| | |||||||||  ||||||| ||| |||||||| |||||     
T  12224506 tcaattgattttgatttttcaaccaaaacgtgcaaaa-ttgcaattttgttatgagtaatcatatactcacatgtcaaatgtcgctccctaattttatag 12224604  T
Q  294 gcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    ||||| ||||||||| ||||||   ||||| || || ||||  |||||||||||||||||  |||||||||  |||    |||| |||||||||||||||    
T  12224605 gcatgattagaacatcataaga---ttcaccataaaattttagagtttttaaacgagaga-gaattaattaggaataacataagaaattcataattatgg 12224700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 153
Target Start/End: Complemental strand, 31894319 - 31894257
Alignment:
Q  91 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 153  Q
    |||||||||||||||||  ||||||||||| ||||||| ||||| |||| |||||||||||||    
T  31894319 aaaaataaaggacgaaagtgttacctaaaattaagttaagggactatttgtgtaattttgcct 31894257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 44307672 - 44307603
Alignment:
Q  91 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaaca 160  Q
    |||||||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||| ||||||    
T  44307672 aaaaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccttaaaaca 44307603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 264
Target Start/End: Original strand, 31252295 - 31252394
Alignment:
Q  164 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 263  Q
    |||||||||| ||| ||||||||||| | |||||||||||||||||||  ||  |||| ||||  |||||| ||||||||||| || ||||||||| |||    
T  31252295 tgcaaagtttcataacatttcaatgatgtttcaatttatttttatttttgaatcaaaacgtgc-taaattgcaattttgttccgagcaagcgtatattca 31252393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 331 - 398
Target Start/End: Original strand, 8725240 - 8725307
Alignment:
Q  331 ttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatggaaaat 398  Q
    |||||||| ||||||| |||||| ||  ||||||||||||||||||| |||| |||||||||| ||||    
T  8725240 ttttgcagattttaaaggagagaaaaggtaattataaattgtttaagaaatttataattatgggaaat 8725307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 29706738 - 29706781
Alignment:
Q  18 gaagaagcttgtgtgaacattggagaagatgaacataaagttaa 61  Q
    ||||||||||||||||||||| |||||||||||||||| |||||    
T  29706738 gaagaagcttgtgtgaacattagagaagatgaacataacgttaa 29706781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 31894539 - 31894601
Alignment:
Q  91 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 153  Q
    |||||||||||||||||| |||| |||||| ||||||| ||||| | || |||||||||||||    
T  31894539 aaaaataaaggacgaaaatgttatctaaaattaagttaagggactaattgtgtaattttgcct 31894601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 1511251 - 1511190
Alignment:
Q  91 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 152  Q
    ||||||||||||||||||  |||||||||| ||||||| ||||| | || ||||||||||||    
T  1511251 aaaaataaaggacgaaaatattacctaaaattaagttaagggactaattgtgtaattttgcc 1511190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 310 - 390
Target Start/End: Complemental strand, 21634512 - 21634432
Alignment:
Q  310 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 390  Q
    |||||||||||||| || || ||||  ||||||||||||||  |  |||||||||||||||||||||  ||||| ||||||    
T  21634512 ataagaatcttcaccataaaattttagagtttttaaacgaggaatgaattaattataaattgtttaaaaaattcttaatta 21634432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 296 - 376
Target Start/End: Original strand, 28837412 - 28837491
Alignment:
Q  296 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaa 376  Q
    |||||||||| || |||| || |||||||||||| ||||  ||||||| ||||||| ||||||||| ||| ||||||||||    
T  28837412 atggttagaatatcataaaaaccttcacaatgaaattttagagttttttaacgagaaacaaattaa-tatgaattgtttaa 28837491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 1511475 - 1511538
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 158  Q
    |||||||||||||  ||||||||||  ||||||| ||||| | || ||||||||||||||||||    
T  1511475 ataaaggacgaaagtgttacctaaatttaagttaagggactaattgtgtaattttgcctaaaaa 1511538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 154
Target Start/End: Complemental strand, 10878682 - 10878623
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 154  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||||    
T  10878682 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccta 10878623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 28408529 - 28408591
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 157  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  28408529 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 28408591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 1e-56; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 164 - 392
Target Start/End: Complemental strand, 9175808 - 9175581
Alignment:
Q  164 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 263  Q
    ||||||||||||||||||||| | || ||||| ||||  |||||||||  ||| |||| |||||||| || |||||||||||||||||||| | ||||||    
T  9175808 tgcaaagttttatagcatttcgaagatgattctattttattttatttttcaactaaaatgtgcaaaa-ttaaaattttgttcctagtaagcatttactca 9175710  T
Q  264 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 363  Q
      |||||||||| |||||||||| || || |||  |||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  9175709 tgggtcaaattttgttccctaattttgtaggcaatgttagaacataataagatccttcactatgaagttttgcagtttttaaacgagagacaaattaatt 9175610  T
Q  364 ataaattgtttaagtaattcataattatg 392  Q
    |||| || |||||| ||||||||||||||    
T  9175609 ataagttatttaagaaattcataattatg 9175581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 42231608 - 42231384
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    |||||||||||||||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  42231608 aaagttttatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 42231510  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||| ||||| ||||| | ||||||||||||| ||||||||||||||    
T  42231509 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacgatgaaattttgtaatttttaaacgagatacaaattaattata 42231410  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  42231409 aattgtttaagaaattcataattatg 42231384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 3648288 - 3648512
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| ||| |||||||| | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||      
T  3648288 aaagtttcataacatttcaaagtcgtttaaatttattttgatttttcaactaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaa 3648386  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| | ||||||||||||    
T  3648387 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagataaaaattaattata 3648486  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  3648487 aattgtttaagaaattcataattatg 3648512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 9877891 - 9877667
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  |||||| |||||||||      
T  9877891 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcatatactcacaa 9877793  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| ||| ||||||||||| |||||||||||||     
T  9877792 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtctttaaacgagatacaaattaattatg 9877693  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  9877692 aattgtttaagaaattcataattatg 9877667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 379094 - 378871
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || ||||||||||||| ||||| || ||||| | ||||||| ||||| ||||||||| |||||| |||||||||  |    
T  379094 aaagtttcatagcatttcgaagtcgtttcaatttattttaattttgaaccaaaacg-tgcaaaa-ttgaatttttgttccgagtaagtgtatactcatag 378997  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    |||||||||  ||||||||| ||  | |||||  |||||||| ||||||| ||||||||| || ||||| ||||||||||||||| ||||||||||||||    
T  378996 gtcaaatttaattccctaattttgcaggcatgactagaacatgataagaaacttcacaataaaattttgtagtttttaaacgagatacaaattaattata 378897  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  378896 aattgtttaagaaattcataattatg 378871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 2728689 - 2728913
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||| |||| || ||||| ||||||||||||||   ||||| ||||||||||      
T  2728689 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgttcaaaa-ttgaaattttgttctgcgtaagtgtatactcacaa 2728787  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    || |||||| |||||||||| ||||| |||||  |||||||| ||||||| ||||||| |||| ||||  ||||||||||||||| ||||||||||||||    
T  2728788 gttaaatttagttccctaattttataggcatgactagaacatgataagaaccttcacagtgaaattttatagtttttaaacgagatacaaattaattata 2728887  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  2728888 aattgtttaagaaattcataattatg 2728913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 16787521 - 16787745
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  16787521 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 16787619  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||| ||| |||||||  |||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  16787620 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaactttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 16787719  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  16787720 aattgtttaagaaattcataattatg 16787745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 175 - 392
Target Start/End: Original strand, 34136305 - 34136521
Alignment:
Q  175 atagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatt 274  Q
    |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||  ||||||||    
T  34136305 atagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaagtcaaatt 34136403  T
Q  275 tcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgttt 374  Q
    | |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||||||||||    
T  34136404 tagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattataaattgttt 34136503  T
Q  375 aagtaattcataattatg 392  Q
    ||| ||||||||||||||    
T  34136504 aagaaattcataattatg 34136521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 228 - 392
Target Start/End: Complemental strand, 4404619 - 4404455
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||| ||| ||    
T  4404619 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaacctttacagtg 4404520  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    || ||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  4404519 aaattttgtagtctttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 4404455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 161 - 392
Target Start/End: Complemental strand, 39915194 - 39914963
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  39915194 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 39915096  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  39915095 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 39914996  T
Q  360 aattataaattgtttaagtaattcataattatg 392  Q
    |||||||||||||||||| ||||||||||||||    
T  39914995 aattataaattgtttaagaaattcataattatg 39914963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 228 - 382
Target Start/End: Complemental strand, 7278634 - 7278480
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  7278634 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 7278535  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaatt 382  Q
    || ||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  7278534 aaattttgtagtctttaaacgagatacaaattaattataaattgtttaagaaatt 7278480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 165 - 392
Target Start/End: Complemental strand, 19262 - 19034
Alignment:
Q  165 gcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcac 264  Q
    ||||||||| ||||||||||||  | || |||||||| ||| |||||  | | ||||| | ||||| ||| ||||||||||| | ||| | |||||||||    
T  19262 gcaaagtttcatagcatttcaaaaatgactcaatttagtttgatttttcatccaaaagtttcaaaatttgcaattttgttccaaataaccatatactcac 19163  T
Q  265 tggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttca-caatgaagttttgcagtttttaaacgagagacaaattaatt 363  Q
    ||||||||||| |||||||||| || |  |||||||||||| |  ||||||||||||| | | ||| ||||| ||||||||||| || ||||||||||||    
T  19162 tggtcaaattttgttccctaattttgtttgcatggttagaataccataagaatcttcaccgacgaaattttgaagtttttaaaccagggacaaattaatt 19063  T
Q  364 ataaattgtttaagtaattcataattatg 392  Q
    || ||||||||||| ||||||||||||||    
T  19062 attaattgtttaagaaattcataattatg 19034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 23402779 - 23402555
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| |   || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  |||||||||| |||||      
T  23402779 aaagtttcatagcatttcgaaatcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatgctcacaa 23402681  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||| | |||| ||||| ||| ||||||| ||| ||||||||||||||    
T  23402680 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcatagtgaaattttgtagtctttaaacaagatacaaattaattata 23402581  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    | ||||||||| ||||||||||||||    
T  23402580 agttgtttaagaaattcataattatg 23402555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 228 - 392
Target Start/End: Original strand, 29727938 - 29728100
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| ||  | |||||  |||||||  |  |||| ||||||||||    
T  29727938 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgcaggcatgactagaacacga--agaaccttcacaatg 29728035  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    || ||||| | ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  29728036 aaattttgtaatttttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 29728100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 249 - 392
Target Start/End: Original strand, 40470118 - 40470261
Alignment:
Q  249 gtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacg 348  Q
    ||||||||||| ||||  | ||||||| |||||||||| || || |||||  || ||||| |||||||| ||||||||||| ||||| |||||||||| |    
T  40470118 gtaagcgtataatcacaaggcaaatttagttccctaattttgtaggcatgactaaaacatgataagaatattcacaatgaaattttgtagtttttaaatg 40470217  T
Q  349 agagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    ||| ||||||||||||||||||||||||| ||||||||||||||    
T  40470218 agatacaaattaattataaattgtttaagaaattcataattatg 40470261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 166 - 390
Target Start/End: Original strand, 40401001 - 40401224
Alignment:
Q  166 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 265  Q
    |||||||| ||| |||||  | |||| ||| |||||||||||||||  ||| ||||  | | ||||||| |||||| |||| |||||||||||||||||     
T  40401001 caaagtttcatatcattttgaagacgtttcgatttatttttatttttcaaccaaaacatac-aaaattgcaattttattccgagtaagcgtatactcaca 40401099  T
Q  266 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 365  Q
    | ||||||||| ||||||||| |||   |||| |||||||||| ||||||| |||||  ||||  || || ||||||| |||||||||| ||||||||||    
T  40401100 gctcaaatttcattccctaattttacgggcatagttagaacatcataagaaccttcaacatgacattctggagtttttgaacgagagacgaattaattat 40401199  T
Q  366 aaattgtttaagtaattcataatta 390  Q
    ||||| ||| || ||||||||||||    
T  40401200 aaattattttagaaattcataatta 40401224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 155 - 394
Target Start/End: Complemental strand, 29352045 - 29351807
Alignment:
Q  155 aaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagc 254  Q
    |||| ||| |||||| |||  ||||||||||| |||| || ||||| ||||||||||  ||| |||| |||| ||| ||| ||||||||||||||||| |    
T  29352045 aaaaaaatctgcaaattttcgtagcatttcaaagacgttttaatttgtttttatttttcaaccaaaacgtgcgaaa-ttgcaattttgttcctagtaaac 29351947  T
Q  255 gtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagac 354  Q
    |||||||||   ||||||||  |||||||||  || || ||||||||||||||  |||| ||  ||||| ||||  ||||| ||||||||  ||||| ||    
T  29351946 gtatactcatgagtcaaattatgttccctaactttgtaggcatggttagaacagcataaaaactttcaccatgagattttggagtttttactcgagatac 29351847  T
Q  355 aaattaattataaattgtttaagtaattcataattatgga 394  Q
    |||||||| || |||| |||||| ||||||||||||||||    
T  29351846 aaattaataatgaattttttaagaaattcataattatgga 29351807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 166 - 393
Target Start/End: Original strand, 32539972 - 32540185
Alignment:
Q  166 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 265  Q
    |||||||| |||||||||| | |||| |||||||||||||||||||  ||| ||||  || |||| ||||||||||||||||||||||| ||||||||      
T  32539972 caaagtttcatagcatttcgaagacgtttcaatttatttttatttttcaaccaaaacatgtaaaa-ttgaaattttgttcctagtaagcatatactcatg 32540070  T
Q  266 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 365  Q
     ||||||||| ||             | ||||||||||||||||||||||| ||||| |||||| ||||  | |||||||| ||||||| ||||||||||    
T  32540071 tgtcaaattttgt-------------aggcatggttagaacataataagaaccttcaaaatgaaattttataatttttaaatgagagacgaattaattat 32540157  T
Q  366 aaattgtttaagtaattcataattatgg 393  Q
    ||||| |||||| |||| ||||||||||    
T  32540158 aaattttttaagaaatttataattatgg 32540185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 14161495 - 14161555
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14161495 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 14161555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 167 - 359
Target Start/End: Complemental strand, 3435917 - 3435726
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| ||| |||||||| | || || |||||||||| |||||  ||| |||| | |||||| | |||||||||||||  |||||| |||||||||      
T  3435917 aaagtttcataacatttcaaagtcgtttaaatttattttgatttttcaaccaaaacgcgcaaaact-gaaattttgttccgcgtaagcatatactcacaa 3435819  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
    ||||||||| ||||||||||  | || |||||  |||||||| |||||||  |||||||| || ||||| ||||||||||||||| |||||||    
T  3435818 gtcaaatttagttccctaattatgtaggcatgactagaacatgataagaacattcacaattaaattttgtagtttttaaacgagatacaaatt 3435726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 310 - 392
Target Start/End: Complemental strand, 15838816 - 15838734
Alignment:
Q  310 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    ||||||| ||||||||| || ||||| | ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  15838816 ataagaaccttcacaataaaattttgtaatttttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 15838734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 229 - 390
Target Start/End: Original strand, 35852495 - 35852656
Alignment:
Q  229 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 328  Q
    |||||| ||||||||||| | |||||  ||||||||  || |||||| |||| ||||| ||||| ||||||||||||||| |||| ||  ||||| || |    
T  35852495 aaattgcaattttgttccgaataagcaaatactcacgagtaaaattttgttctctaattttataggcatggttagaacatcataaaaactttcaccataa 35852594  T
Q  329 agttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 390  Q
    |   ||| ||||||||| | || ||| |||||||||| ||||||||||| ||||||||||||    
T  35852595 aaaattggagtttttaatcaagggaccaattaattatgaattgtttaagaaattcataatta 35852656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 99 - 153
Target Start/End: Complemental strand, 14156217 - 14156163
Alignment:
Q  99 aggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 153  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  14156217 aggacgaaaacgttacctaaaaataagttataggaccatttgtgtaattttgcct 14156163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 228 - 370
Target Start/End: Original strand, 32964064 - 32964206
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    ||||||| | ||||||||  ||||||| | || |||| ||||||||||||||||||||| || | |||||| ||| ||||| ||||| | |||||| ||     
T  32964064 aaaattgcatttttgttcagagtaagcatttaatcacgggtcaaatttcgttccctaattttgttagcatgtttataacatcataaggaccttcaccatt 32964163  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaatt 370  Q
    |||||||  ||||||||||||| |  |||||||||||| ||||    
T  32964164 aagttttagagtttttaaacgataagcaaattaattatgaatt 32964206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 197 - 390
Target Start/End: Original strand, 15541743 - 15541935
Alignment:
Q  197 atttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagca 296  Q
    ||||||||| |||||  |||||||| |||||||| || || ||||||||  | ||||| ||||||||   ||||||||  |||||||||| || ||  ||    
T  15541743 atttattttaattttccaacaaaaatgtgcaaaattttaa-ttttgttcacattaagcatatactcaggagtcaaattatgttccctaattttgtataca 15541841  T
Q  297 tggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 390  Q
    ||||||||||||| |||||| |||||| || || ||| | ||||| ||||| |||||| |||  ||||| ||||||||||  ||||||| ||||    
T  15541842 tggttagaacatagtaagaaccttcaccattaaatttgggagtttctaaacaagagacgaatcgattatgaattgtttaaaaaattcatgatta 15541935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 36409086 - 36409020
Alignment:
Q  301 tagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataa 367  Q
    |||||||| || |||| |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  36409086 tagaacatgattagaaccttcacaatgaaattttgtagtttttaaacgagatacaaattaattataa 36409020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 368
Target Start/End: Original strand, 29892039 - 29892250
Alignment:
Q  153 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaa 252  Q
    |||||| |||||||||| |||| ||||||||||| || | || ||||  ||||||||||  ||| |||| ||||  |||||| |||||||||   |||||    
T  29892039 taaaaagaatttgcaaaattttgtagcatttcaaagatg-tttaatt--tttttatttttcaaccaaaacgtgc-gaaattgcaattttgttatgagtaa 29892134  T
Q  253 gcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagag 352  Q
      |||||||||| ||||||||||| ||| ||||| || ||||||||  || ||||| |||||||  |||    |||| ||||  |||||||||||||||     
T  29892135 atgtatactcacgggtcaaatttctttctctaattttctaagcatgtatataacatcataagaactttcctcgtgaatttttagagtttttaaacgagat 29892234  T
Q  353 acaaattaattataaa 368  Q
    || |||||||||||||    
T  29892235 acgaattaattataaa 29892250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 20178432 - 20178363
Alignment:
Q  91 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaaca 160  Q
    |||||||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||| ||||||    
T  20178432 aaaaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccttaaaaca 20178363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 20223160 - 20223091
Alignment:
Q  91 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaaca 160  Q
    |||||||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||| ||||||    
T  20223160 aaaaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccttaaaaca 20223091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 323
Target Start/End: Complemental strand, 33639282 - 33639154
Alignment:
Q  194 tcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataa 293  Q
    |||||||||||| |||||  ||| |||| |||| ||||||| ||||||  ||| ||||||| |||||||||   |||||||| |||||||||| || ||     
T  33639282 tcaatttattttgatttttcaaccaaaacgtgc-aaaattgcaatttttctccaagtaagcatatactcacacatcaaattttgttccctaattttgtag 33639184  T
Q  294 gcatggttagaacataataagaatcttcac 323  Q
    ||||||||| ||||| ||| |||| |||||    
T  33639183 gcatggttacaacattataggaatattcac 33639154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 14161354 - 14161397
Alignment:
Q  18 gaagaagcttgtgtgaacattggagaagatgaacataaagttaa 61  Q
    ||||||||||||||||||||| |||||||||||||||| |||||    
T  14161354 gaagaagcttgtgtgaacattagagaagatgaacataacgttaa 14161397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 325 - 388
Target Start/End: Complemental strand, 32750434 - 32750371
Alignment:
Q  325 atgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataat 388  Q
    ||||| ||||| ||||||||||||||| || |||||||||| ||||||||| | ||||||||||    
T  32750434 atgaaattttggagtttttaaacgagatacgaattaattatgaattgtttatgaaattcataat 32750371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 311 - 392
Target Start/End: Original strand, 3672247 - 3672327
Alignment:
Q  311 taagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    |||||| |||||| ||||| ||| | |||||||||| ||  ||| |||||||||| ||||||||||| ||||||||||||||    
T  3672247 taagaaccttcaccatgaaatttgg-agtttttaaatgaatgacgaattaattatgaattgtttaaggaattcataattatg 3672327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 14577154 - 14577217
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 158  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || ||||||||||||||||||    
T  14577154 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaaa 14577217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 15863285 - 15863336
Alignment:
Q  331 ttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaatt 382  Q
    ||||| ||||||||||||||| || |||||||||| ||||||||||| ||||    
T  15863285 ttttggagtttttaaacgagatacgaattaattatgaattgtttaagaaatt 15863336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 313
Target Start/End: Complemental strand, 17480101 - 17479956
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    |||||||||||||||||||   | | || |||||||||| |||||  ||| |||| |||  ||||||| |||||| |||  ||||| | |||||||||      
T  17480101 aaagttttatagcatttcataaaagcttgaatttattttgatttttcaaccaaaatgtg-taaaattgcaattttcttctgagtaaacatatactcacga 17480003  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataa 313  Q
    ||||||||| |||||||||| || || |||| ||| |||||| ||||    
T  17480002 gtcaaattttgttccctaattttgtaggcatagttggaacatcataa 17479956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 30928371 - 30928309
Alignment:
Q  94 aataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaa 156  Q
    |||||||||| |||| ||||||||||| ||||||| ||||| | || |||||||||| |||||    
T  30928371 aataaaggacaaaaatgttacctaaaattaagttaagggactaattgtgtaattttgtctaaa 30928309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 35482990 - 35483052
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 157  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  35482990 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 35483052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 17844167 - 17844224
Alignment:
Q  93 aaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttg 150  Q
    |||||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||    
T  17844167 aaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttg 17844224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 30928601 - 30928658
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 152  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||    
T  30928601 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 30928658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 6e-52; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 161 - 392
Target Start/End: Original strand, 41971746 - 41971977
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaac-aaaaaggtgcaaaaattgaaattttgttcctagtaagcgtata 259  Q
    ||||| |||||||||||||||||||| | || || |||||||||| |||||  ||| ||||| |||||||| ||||||||||||||   |||||||||||    
T  41971746 atttgtaaagttttatagcatttcaaagtcgtttaaatttattttgatttttcaaccaaaaacgtgcaaaa-ttgaaattttgttcagcgtaagcgtata 41971844  T
Q  260 ctcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
    ||||| ||||||||||  ||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| ||||||||||||||  | |||||    
T  41971845 ctcacaggtcaaatttaattccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtttttaaacgaggtataaatt 41971944  T
Q  360 aattataaattgtttaagtaattcataattatg 392  Q
    |||||||||||||||||| ||||||||||||||    
T  41971945 aattataaattgtttaagaaattcataattatg 41971977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 161 - 392
Target Start/End: Complemental strand, 3829659 - 3829430
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||    
T  3829659 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 3829561  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatta 360  Q
    ||||  ||||||||| |||||||||  || || |||||  |||||||| ||||||| ||||||||||||  |||| ||||||||||||||| ||||||||    
T  3829560 tcacaagtcaaatttagttccctaactttgtaggcatgactagaacatgataagaaccttcacaatgaa-atttgtagtttttaaacgagatacaaatta 3829462  T
Q  361 attataaattgtttaagtaattcataattatg 392  Q
    ||||||||||||||||| ||||||||||||||    
T  3829461 attataaattgtttaagaaattcataattatg 3829430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 11957845 - 11958069
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||||||| |||||||| ||| |||||||||||   |||||||||||||||      
T  11957845 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaacaaaaacgtgcaaaa-ttgcaattttgttccgcataagcgtatactcacaa 11957943  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||   ||| ||||| || || ||||| ||||||||| ||||||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  11957944 gtcaaattcaattcactaattttctaggcatgattagaacatgataagaaccttcacaatgaaattttgtagtttttaaacgagatacaaattaattata 11958043  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    |||| |||||| ||||||||||||||    
T  11958044 aattatttaagaaattcataattatg 11958069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 167 - 390
Target Start/End: Complemental strand, 35908199 - 35907977
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| |   || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  35908199 aaagtttcatagcatttcgaaatcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 35908101  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  35908100 gtcaaatttagttccctaattttgtatgcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 35908001  T
Q  367 aattgtttaagtaattcataatta 390  Q
    ||||||||||| ||||||||||||    
T  35908000 aattgtttaagaaattcataatta 35907977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 17445965 - 17445741
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| ||| |||||| | | || || |||||||||| |||||  ||| ||||  ||||||| |||||||||||||||  ||||||||||||||||      
T  17445965 aaagtttcataacatttcgaagtcgtttaaatttattttgatttttcaaccaaaacttgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 17445867  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| ||||| |||| || || |||||  |||||||| ||||||| ||||| |||||| ||||| ||| ||||||||||| ||||||||||||||    
T  17445866 gtcaaatttagttccttaattttgtaggcatgactagaacatgataagaaccttcataatgaaattttgtagtctttaaacgagatacaaattaattata 17445767  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  17445766 aattgtttaagaaattcataattatg 17445741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 228 - 392
Target Start/End: Complemental strand, 7434033 - 7433869
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| | ||||| ||||||||||    
T  7434033 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatg 7433934  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    || ||||| | ||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||    
T  7433933 aaattttgtaatttttaaacgagatacaaattaattataaattgttaaagaaattcataattatg 7433869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 228 - 392
Target Start/End: Original strand, 42310495 - 42310659
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    ||||||||||||||||| |  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  42310495 aaaattgaaattttgtttcgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 42310594  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    || ||||| | ||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  42310595 aaattttgtaatttttaaactagatacaaattaattataaattgtttaagaaattcataattatg 42310659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 32981551 - 32981775
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||||||| |||||||| |||||||||||||||  |||||| | |||||||      
T  32981551 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaacaaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcatttactcacaa 32981649  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||| ||| || || |||||  |||||||| ||||||| ||||||||| || ||||  | ||||| ||||||| ||||||||||||||    
T  32981650 gtcaaatttagttcccaaattttgtaggcatgactagaacatgataagaaccttcacaataaaattttataatttttcaacgagatacaaattaattata 32981749  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  32981750 aattgtttaagaaattcataattatg 32981775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 228 - 391
Target Start/End: Complemental strand, 23313606 - 23313443
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    ||||||||||||||||||   |||||||||||||||   ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  23313606 aaaattgaaattttgttctgcgtaagcgtatactcataagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 23313507  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 391  Q
    || ||||| | ||||||||||||| ||||||||||||||||||||||||  |||||||||||||    
T  23313506 aaattttgtaatttttaaacgagatacaaattaattataaattgtttaataaattcataattat 23313443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 249 - 392
Target Start/End: Complemental strand, 33490296 - 33490153
Alignment:
Q  249 gtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacg 348  Q
    |||||||||||| | |  ||||||||| |||||||||| || || |||||  |||||||| |||| || |||||||||||| ||||| ||||||||||||    
T  33490296 gtaagcgtatacccgcaagtcaaatttagttccctaattttgtaggcatgactagaacatgataataaccttcacaatgaaattttgtagtttttaaacg 33490197  T
Q  349 agagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    ||| || |||||||||||||||||||||| ||||||||||||||    
T  33490196 agatacgaattaattataaattgtttaagaaattcataattatg 33490153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 193 - 391
Target Start/End: Complemental strand, 28463582 - 28463396
Alignment:
Q  193 ttcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttata 292  Q
    ||||||||||||| |||||  ||| ||||  ||||||| ||||||||||||||| | ||||||||||||||| ||||||| ||  ||||||||| ||  |    
T  28463582 ttcaatttattttgatttttcaaccaaaacatgcaaaa-ttgaaattttgttccgaataagcgtatactcacaggtcaaaattaattccctaattttgca 28463484  T
Q  293 agcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 391  Q
     |||||  ||||||           |||||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||| |||||||||||||    
T  28463483 ggcatgactagaac-----------cttcacaatgaaattttgtagtttttaaacgaaatacaaattaattataaattgtttaagaaattcataattat 28463396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 248 - 390
Target Start/End: Complemental strand, 32944499 - 32944357
Alignment:
Q  248 agtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaac 347  Q
    ||||||| ||||||||||| |||||||| |||||||||| ||||||||||| ||||||||| |||||||  ||||| ||||||||||| ||||||   |     
T  32944499 agtaagcatatactcactgatcaaattttgttccctaattttataagcatgcttagaacatcataagaacattcaccatgaagttttggagttttcggaa 32944400  T
Q  348 gagagacaaattaattataaattgtttaagtaattcataatta 390  Q
    | |  |  |||||||||| ||||||||||| ||||||||||||    
T  32944399 gtggaaataattaattatgaattgtttaagaaattcataatta 32944357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 236 - 370
Target Start/End: Original strand, 5715373 - 5715507
Alignment:
Q  236 aattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 335  Q
    ||||||||||| ||||||  |||| ||||||||||||||| ||||  |||| || || ||||||||| ||||| ||||||| |||||| || || |||||    
T  5715373 aattttgttccgagtaagtatatattcactggtcaaattttgttctataattttgtaggcatggttaaaacatcataagaaacttcaccataaaattttg 5715472  T
Q  336 cagtttttaaacgagagacaaattaattataaatt 370  Q
     | ||||||||||||| || |||||||||| ||||    
T  5715473 gaatttttaaacgagatacgaattaattatgaatt 5715507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 269 - 344
Target Start/End: Original strand, 7350228 - 7350303
Alignment:
Q  269 caaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagttttta 344  Q
    |||||||||||| ||||| || ||||||||||||||| || |||||||||||||| ||||| ||||  ||||||||    
T  7350228 caaatttcgttcactaattttgtaagcatggttagaatatcataagaatcttcaccatgaaattttagagttttta 7350303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 331 - 393
Target Start/End: Complemental strand, 33774691 - 33774629
Alignment:
Q  331 ttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    |||||||||||||||||| ||||| |||| ||||| ||||||||||| | |||||||||||||    
T  33774691 ttttgcagtttttaaacgggagacgaatttattatgaattgtttaagaagttcataattatgg 33774629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 248 - 389
Target Start/End: Original strand, 18716322 - 18716463
Alignment:
Q  248 agtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaac 347  Q
    ||||||| |||| |||| ||||||||||  ||||||||| |||||  |||||||||||||| ||||||| |||||  || || ||||      |||||||    
T  18716322 agtaagcatatattcacgggtcaaattttattccctaattttatagacatggttagaacatcataagaaccttcaacataaaatttttagagatttaaac 18716421  T
Q  348 gagagacaaattaattataaattgtttaagtaattcataatt 389  Q
     ||||   |||||||||| ||||||||||| |||||||||||    
T  18716422 aagaggtgaattaattatgaattgtttaagaaattcataatt 18716463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 391
Target Start/End: Complemental strand, 3604863 - 3604699
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||  |||||||| | ||||||  ||||||||  ||||||||||  ||||||||| || || ||||||||||||||| |||| ||   || | | |    
T  3604863 aaaattgctattttgtttcgagtaagtatatactcaagggtcaaattttattccctaattttgtaggcatggttagaacatcataaaaacggtcgccacg 3604764  T
Q  328 -aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 391  Q
     || ||||| ||||||||||||| | |||||||||| || ||| ||||||| |||||||| ||||    
T  3604763 aaaattttggagtttttaaacgaaaaacaaattaataattaatagtttaagaaattcatagttat 3604699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 12115240 - 12115300
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 155  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | || |||||||||||||||    
T  12115240 ataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcctaa 12115300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 228 - 323
Target Start/End: Complemental strand, 42412464 - 42412370
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcac 323  Q
    ||||||| ||||||||||| | || |||||||||||| |||||||||||||| ||||||  | ||   ||||||| ||||| ||||||||||||||    
T  42412464 aaaattgcaattttgttccgaata-gcgtatactcacaggtcaaatttcgtttcctaattctgtagatatggttaaaacatcataagaatcttcac 42412370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 370
Target Start/End: Complemental strand, 17744802 - 17744594
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||| ||| |||||||||||| ||   ||| |||||||||||||||  | | |||| |||| ||| ||| |||| | |||  ||||||| |||||    
T  17744802 atttgaaaaatttcatagcatttcaaagatttttcgatttatttttattttttagccaaaacgtgcgaaa-ttgcaattctattcagagtaagcatatac 17744704  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatta 360  Q
    | || |||||||||| ||||  |||| || || | ||||||||||||| ||||||| |||||  ||||| ||||| | |||| ||| |||| |  |||||    
T  17744703 tgacgggtcaaattttgttctataattttgtaggaatggttagaacatcataagaaacttcaacatgaaattttggaattttaaaatgagatatgaatta 17744604  T
Q  361 attataaatt 370  Q
    ||||| ||||    
T  17744603 attatgaatt 17744594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 7113926 - 7113863
Alignment:
Q  91 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 154  Q
    |||||||||||||||||  |||||||||||  |||||| ||||| | || ||||||||||||||    
T  7113926 aaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgccta 7113863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 158
Target Start/End: Complemental strand, 19897233 - 19897170
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 158  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | || | |||||||||| |||||    
T  19897233 ataaaggacgaaaatgttacctaaaattaagttaagggactaattgtataattttgccaaaaaa 19897170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 153
Target Start/End: Original strand, 40290073 - 40290128
Alignment:
Q  98 aaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 153  Q
    ||||||||||| ||||||||||| ||||||| ||||| | || |||||||||||||    
T  40290073 aaggacgaaaatgttacctaaaattaagttaagggactaattatgtaattttgcct 40290128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 351 - 393
Target Start/End: Original strand, 9901670 - 9901712
Alignment:
Q  351 agacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    ||||||||||||||| |||| |||||| |||||||||||||||    
T  9901670 agacaaattaattatgaattatttaagaaattcataattatgg 9901712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 17611713 - 17611775
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 157  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  17611713 ataaaggacgaaagtgttacctaaaataaagttaagggactaattatgtaattttgcctaaaa 17611775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 157
Target Start/End: Original strand, 25780173 - 25780239
Alignment:
Q  91 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 157  Q
    |||||||||||||||||  |||||||||||  |||||| ||||| | || ||||||||| |||||||    
T  25780173 aaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttacctaaaa 25780239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 4e-50; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 3292392 - 3292616
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | ||||| |||||||| | |||||  ||| |||| ||| |||| |||||||||||||||  ||||||||||||||||      
T  3292392 aaagtttcatagcatttcgaagtcgattaaatttattatgatttttcaaccaaaacgtggaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 3292490  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || ||||| ||||||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  3292491 gtcaaatttagttccctaattttgtaggcatgattagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 3292590  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  3292591 aattgtttaagaaattcataattatg 3292616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 28876810 - 28877034
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||||| | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  |||||| |||||||||      
T  28876810 aaagtttcatagcatttcaaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcttatactcacaa 28876908  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| ||| ||||||||||| | ||||||||||||    
T  28876909 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtctttaaacgagatagaaattaattata 28877008  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  28877009 aattgtttaagaaattcataattatg 28877034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 6236181 - 6235957
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | |  | || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  6236181 aaagtttcatagcatttcgaagtggtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 6236083  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  6236082 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 6235983  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  6235982 aattgtttaagaaattcataattatg 6235957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 6689731 - 6689955
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | ||||| |||||||| | |||||  ||| |||| ||| |||| |||||||||||||||  ||||||||||||||||      
T  6689731 aaagtttcatagcatttcgaagtcgattaaatttattatgatttttcaaccaaaacgtggaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 6689829  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    |||||||||  ||||||||| || || ||||| ||||||||| ||||||| ||||||| |||| ||||| ||| |||||||||||  |||||||||||||    
T  6689830 gtcaaatttaattccctaattttgtaggcatgattagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagattcaaattaattata 6689929  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  6689930 aattgtttaagaaattcataattatg 6689955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 196 - 392
Target Start/End: Original strand, 29995507 - 29995703
Alignment:
Q  196 aatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagc 295  Q
    |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| || || ||    
T  29995507 aatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttccctaattttgtaggc 29995605  T
Q  296 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 392  Q
    |||  |||||||| ||||||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  29995606 atgactagaacatgataagaaccttcacaatgaaattttgtagtttttaaacgagatacaaattaattataagttagtttaagaaattcataattatg 29995703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 43143080 - 43143304
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || |  |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  43143080 aaagtttcatagcatttcgaagtcgttaaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 43143178  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  43143179 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 43143278  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  43143279 aattgtttaagaaattcataattatg 43143304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 161 - 392
Target Start/End: Complemental strand, 20129993 - 20129762
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  20129993 atttgtaaagtttcatagcatttcgaaatcgttttaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 20129895  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  20129894 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 20129795  T
Q  360 aattataaattgtttaagtaattcataattatg 392  Q
    |||||||||||||||||| ||||||||||||||    
T  20129794 aattataaattgtttaagaaattcataattatg 20129762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 161 - 392
Target Start/End: Original strand, 26438766 - 26438997
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  26438766 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 26438864  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  26438865 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 26438964  T
Q  360 aattataaattgtttaagtaattcataattatg 392  Q
    |||||||||||||||||| ||||||||||||||    
T  26438965 aattataaattgtttaagaaattcataattatg 26438997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 161 - 392
Target Start/End: Original strand, 34406771 - 34407002
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  34406771 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 34406869  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  34406870 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 34406969  T
Q  360 aattataaattgtttaagtaattcataattatg 392  Q
    |||||||||||||||||| ||||||||||||||    
T  34406970 aattataaattgtttaagaaattcataattatg 34407002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 161 - 392
Target Start/End: Complemental strand, 43356584 - 43356353
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  43356584 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 43356486  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  43356485 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 43356386  T
Q  360 aattataaattgtttaagtaattcataattatg 392  Q
    |||||||||||||||||| ||||||||||||||    
T  43356385 aattataaattgtttaagaaattcataattatg 43356353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 161 - 392
Target Start/End: Complemental strand, 47501453 - 47501222
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  47501453 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 47501355  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  47501354 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 47501255  T
Q  360 aattataaattgtttaagtaattcataattatg 392  Q
    |||||||||||||||||| ||||||||||||||    
T  47501254 aattataaattgtttaagaaattcataattatg 47501222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 167 - 390
Target Start/End: Original strand, 33135940 - 33136162
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| ||| |||||||| | || || || ||||||| |||||  ||| |||| |||||||| |||||||||||||||  |||| ||||||||||       
T  33135940 aaagtttcatatcatttcaaagtcgtttaaaattattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaaacgtatactcataa 33136038  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||| | ||||||||||| ||| ||||||||||||||    
T  33136039 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaatttcgtagtttttaaacaagatacaaattaattata 33136138  T
Q  367 aattgtttaagtaattcataatta 390  Q
    ||||||||||| ||||||||||||    
T  33136139 aattgtttaagaaattcataatta 33136162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 42333270 - 42333495
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  42333270 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 42333368  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  42333369 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 42333468  T
Q  367 aattg-tttaagtaattcataattatg 392  Q
    ||||| |||||| ||||||||||||||    
T  42333469 aattgttttaagaaattcataattatg 42333495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 228 - 392
Target Start/End: Original strand, 10352439 - 10352604
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| || || ||||| ||||||||| ||||||| ||||||||||    
T  10352439 aaaattgaaattttgttccgtgtaagtgtatactcacaagtcaaatttagttccctaattttgtaggcatgattagaacatgataagaaccttcacaatg 10352538  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 392  Q
    || ||||| | ||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  10352539 aaattttgtactttttaaacgagatacaaattaattataagttagtttaagaaattcataattatg 10352604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 25931381 - 25931157
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  |||||||||| |||||      
T  25931381 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtattctcacaa 25931283  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  || ||||| ||||||| ||||||| | || ||||| | ||||||||||||| ||||||||||||||    
T  25931282 gtcaaatttagttccctaattttgtaggcatgactaaaacatgataagaaccttcacagttaaattttgtaatttttaaacgagatacaaattaattata 25931183  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  25931182 aattgtttaagaaattcataattatg 25931157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 35546623 - 35546400
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  35546623 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 35546525  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  || ||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  35546524 gtcaaatttagttccctaat-ttgtaggcatgactaaaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 35546426  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    |||| |||||| ||||||||||||||    
T  35546425 aattatttaagaaattcataattatg 35546400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 161 - 392
Target Start/End: Complemental strand, 13012868 - 13012637
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  13012868 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 13012770  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  13012769 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 13012670  T
Q  360 aattataaattgtttaagtaattcataattatg 392  Q
    ||||||||||| |||||| ||||||||||||||    
T  13012669 aattataaattatttaagaaattcataattatg 13012637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 17510723 - 17510951
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || ||||||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  17510723 aaagtttcatagcatttcgaagtcgtttcaatttattttgatttttgaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 17510821  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacata----ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaat 362  Q
    ||||||||| |||||||||| || || | |||  ||||||| |    ||||||| |||||||||||| ||||  | ||||||||||||| ||||||||||    
T  17510822 gtcaaatttagttccctaattttgtaggtatgactagaacaaacatgataagaaccttcacaatgaaattttataatttttaaacgagatacaaattaat 17510921  T
Q  363 tataaattgtttaagtaattcataattatg 392  Q
    ||||||||||||||| ||||||||||||||    
T  17510922 tataaattgtttaagaaattcataattatg 17510951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 161 - 392
Target Start/End: Original strand, 36381836 - 36382065
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||| ||||  ||||||||||||    
T  36381836 atttgtaaagtttcatagcatttcgaattcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttattccgcgtaagcgtatac 36381934  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatta 360  Q
    ||||  | ||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||| || ||||| | ||||||||||||| ||||||||    
T  36381935 tcacaag-caaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaataaaattttgtaatttttaaacgagatacaaatta 36382033  T
Q  361 attataaattgtttaagtaattcataattatg 392  Q
    ||||||||||||||||| ||||||||||||||    
T  36382034 attataaattgtttaagaaattcataattatg 36382065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 48990000 - 48989776
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||  | | || || |||||||||| |||||  ||| |||| |||| ||| |||||||||||||||  |||||||||||| |||      
T  48990000 aaagtttcatagcattttgaagtcgtttaaatttattttgatttttcaaccaaaacgtgccaaa-ttgaaattttgttccgcgtaagcgtatacccacaa 48989902  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    |||||||||  ||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||  ||||||||||||||| |||||||||| |||    
T  48989901 gtcaaatttaattccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttttagtttttaaacgagatacaaattaatcata 48989802  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  48989801 aattgtttaagaaattcataattatg 48989776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 228 - 392
Target Start/End: Original strand, 30077191 - 30077356
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||  ||||| ||||| ||||  ||||||||| |||||| ||| || || ||||| ||| ||||| ||||||| ||||||||||    
T  30077191 aaaattgaaattttgttccgcgtaagtgtatattcacaagtcaaatttagttcccaaattttgtaggcatgattataacatgataagaaccttcacaatg 30077290  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 392  Q
    || ||||| ||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  30077291 aaattttgtagtttttaaacgagatacaaattaattataagttagtttaagaaattcataattatg 30077356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 199 - 392
Target Start/End: Complemental strand, 48130617 - 48130425
Alignment:
Q  199 ttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatg 298  Q
    ||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||  |||||| || |||||||||| || || |||      
T  48130617 ttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaagtcaaaattagttccctaattttgtaggcaat 48130519  T
Q  299 gttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
      |||||||| ||||||| ||||||||| || | ||| ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||    
T  48130518 actagaacatgataagaaccttcacaataaaatattgtagtttttaaacgacatacaaattaattataaattgtttaagaaattcataattatg 48130425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 193 - 391
Target Start/End: Original strand, 29134152 - 29134349
Alignment:
Q  193 ttcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttata 292  Q
    |||||||||||||||||||  ||| |||| ||   ||||||||||||||||||||||||   |||||||||  |||||||||| |||| ||||| || ||    
T  29134152 ttcaatttatttttatttttcaaccaaaacgt-ttaaaattgaaattttgttcctagtatttgtatactcataggtcaaattttgttctctaattttgta 29134250  T
Q  293 agcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 391  Q
     ||| | |||||||||||||||||  ||||||||||| |||||| |||| |||||| || | ||||||||| ||||||| ||||| |||||||| ||||    
T  29134251 ggcaagattagaacataataagaaatttcacaatgaaattttgctgtttataaacgtgacaaaaattaattttaaattgattaagaaattcatagttat 29134349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 30110634 - 30110410
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | |  || |||||||||| |||||  ||| |||| |||||||| |||||||||| |||   ||||||| |||||||| |    
T  30110634 aaagtttcatagcatttcgaagtcatttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttattctgcgtaagcgcatactcacag 30110536  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| ||||| |||| || || |||||   | ||||| |||| ||  ||||||||||| ||||| ||||||||||||||| |||||||| |||||    
T  30110535 gtcaaatttagttccttaattttgtaggcatgacaataacatgataataacattcacaatgaaattttgtagtttttaaacgagatacaaattagttata 30110436  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    || |||||||| |||| |||||||||    
T  30110435 aagtgtttaagaaatttataattatg 30110410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 228 - 392
Target Start/End: Original strand, 30216301 - 30216462
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||  || ||    
T  30216301 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaacctt--cagtg 30216398  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    || ||||| ||| |||||| |||| |||| ||||||||||||||||| || ||||||||||||||    
T  30216399 aaattttgtagtctttaaatgagatacaagttaattataaattgttt-agaaattcataattatg 30216462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 256 - 392
Target Start/End: Complemental strand, 40529600 - 40529464
Alignment:
Q  256 tatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagaca 355  Q
    |||||||||  ||||||||| ||||| |||| || || |||||  |||||||| |||| || |||||||||||| ||||| | ||||||||| ||| |||    
T  40529600 tatactcacaagtcaaatttagttccataattttgtaggcatgactagaacatgataaaaaccttcacaatgaaattttgtaatttttaaacaagataca 40529501  T
Q  356 aattaattataaattgtttaagtaattcataattatg 392  Q
    |||||||||||||||||||||| ||||||||||||||    
T  40529500 aattaattataaattgtttaagaaattcataattatg 40529464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 13394870 - 13394959
Alignment:
Q  301 tagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 390  Q
    |||||||| ||||||| |||||||||||| ||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  13394870 tagaacatgataagaaccttcacaatgaaattttgtagtctttaaacgagatacaaattaattataaattgtttaagaaattcataatta 13394959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 228 - 392
Target Start/End: Original strand, 50204643 - 50204797
Alignment:
Q  228 aaaattgaaatttt-gttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaat 326  Q
    |||||||||||||| |||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||           ||||||| |||||||||    
T  50204643 aaaattgaaatttttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatg-----------ataagaaccttcacaat 50204731  T
Q  327 gaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    ||| ||||| ||| ||||||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  50204732 gaaattttgtagtctttaaacgagatataaattaattataaattgtttaagaaattcataattatg 50204797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 229 - 393
Target Start/End: Complemental strand, 9415509 - 9415345
Alignment:
Q  229 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 328  Q
    |||||| ||||||||| | |||||||||||||| ||  |||||||| ||||| ||||| || ||  |||||| |||| || |||| || |||| | || |    
T  9415509 aaattgcaattttgtttcgagtaagcgtatacttacgagtcaaattccgttctctaattttttagacatggtcagaatatcataaaaaccttcgccataa 9415410  T
Q  329 agttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    | |||||  |||||||||||||| ||||||| ||||| ||||||||||| |||||||||||||||    
T  9415409 aattttggggtttttaaacgagatacaaatttattatgaattgtttaagaaattcataattatgg 9415345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 230 - 393
Target Start/End: Original strand, 4038262 - 4038425
Alignment:
Q  230 aattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaa 329  Q
    ||||| ||||||||||| ||||| | ||||||||| |||| |||||||||| ||||| || || | ||||||  ||| | |||||||  ||||| |||||    
T  4038262 aattgcaattttgttccgagtaaacctatactcacaggtctaatttcgttctctaattttgtaggtatggttttaacttcataagaactttcaccatgaa 4038361  T
Q  330 gttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
     ||||| || |||||||||||| | |||||| |||| ||||| ||||| |||||||||||||||    
T  4038362 attttggaggttttaaacgagatataaattagttatgaattgcttaagaaattcataattatgg 4038425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 166 - 377
Target Start/End: Original strand, 13502113 - 13502322
Alignment:
Q  166 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 265  Q
    |||||||| |||||||||||| || | || |||||| |||  |||| || ||||| | ||||||| ||| ||||||||||| ||||||| ||||| ||      
T  13502113 caaagtttcatagcatttcaaagatgttttaatttactttatttttcaatcaaaacg-tgcaaaa-ttgcaattttgttccaagtaagcatatacacatg 13502210  T
Q  266 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 365  Q
    | ||||||||| ||||||||| || || ||||| | ||||||| |||||||  | ||| ||||| ||||| |||||||||| |||||||  |||||||||    
T  13502211 gatcaaatttccttccctaattttgtaggcatgctcagaacatcataagaacttacaccatgaaattttggagtttttaaatgagagacggattaattat 13502310  T
Q  366 aaattgtttaag 377  Q
     |||||||||||    
T  13502311 gaattgtttaag 13502322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 229 - 391
Target Start/End: Original strand, 26546856 - 26547017
Alignment:
Q  229 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 328  Q
    |||||| ||||||||||  ||||||||||||||||| ||||||||| ||||| ||||| || || |||| |||||||||| |||||||  || || ||||    
T  26546856 aaattgcaattttgttctgagtaagcgtatactcacgggtcaaattccgttctctaattttgtaggcattgttagaacatcataagaacatttaccatga 26546955  T
Q  329 agttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 391  Q
    | ||||  |||||||||| ||   ||||||||||||| |||| |||||| | |||||||||||    
T  26546956 aattttagagtttttaaaagacgtacaaattaattatgaattttttaag-atttcataattat 26547017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 29094683 - 29094594
Alignment:
Q  304 aacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    ||||| ||||||| |||||| ||||| ||||| ||||||||||||||| || |||||||||| ||||||||||| |||||||||||||||    
T  29094683 aacatcataagaaccttcaccatgaaattttgaagtttttaaacgagatacgaattaattatgaattgtttaagaaattcataattatgg 29094594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 180 - 393
Target Start/End: Complemental strand, 31853885 - 31853673
Alignment:
Q  180 atttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgtt 279  Q
    ||||||| |||| ||| ||||||||| |||||  ||| ||||  ||| ||| ||| |||||||| |  |||||| |||||||||| ||||||||| ||||    
T  31853885 atttcaaagacgtttctatttattttaatttttcaaccaaaacatgcgaaa-ttgcaattttgtactgagtaagtgtatactcacgggtcaaattacgtt 31853787  T
Q  280 ccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagta 379  Q
       |||| || || ||||||||||||| | ||||||| |||||| || ||  |||| ||| ||||| ||| | ||||||||||||| ||||||||||| |    
T  31853786 ttttaattttgtaggcatggttagaacgtcataagaaccttcaccataaaaatttggagtgtttaaccgaaatacaaattaattatgaattgtttaagaa 31853687  T
Q  380 attcataattatgg 393  Q
    ||||||| ||||||    
T  31853686 attcatacttatgg 31853673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 193 - 393
Target Start/End: Complemental strand, 56225950 - 56225750
Alignment:
Q  193 ttcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaatttt-gttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttat 291  Q
    |||||||||||||||||||  ||| |||| |||||||| ||| |||||| ||| |  |||| | ||||||||  |||||||||||||||| |||| || |    
T  56225950 ttcaatttatttttatttttcaaccaaaacgtgcaaaa-ttgcaattttcgtttcgggtaaacatatactcatgggtcaaatttcgttccataattttgt 56225852  T
Q  292 aagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 391  Q
    | ||||||||||||||| | ||||| |||||| |     ||||  |||||||||| ||||||||| ||||||||  |||||| ||| |||||||||||||    
T  56225851 aggcatggttagaacatcacaagaaccttcaccaaatttttttatagtttttaaatgagagacaatttaattatggattgttaaagaaattcataattat 56225752  T
Q  392 gg 393  Q
    ||    
T  56225751 gg 56225750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 301 - 392
Target Start/End: Complemental strand, 1818256 - 1818164
Alignment:
Q  301 tagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 392  Q
    |||||||| || |||| |||||||||||| ||||| |||||| |||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  1818256 tagaacatgattagaaccttcacaatgaaattttgtagttttcaaacgagatacaaattaattataagttagtttaagaaattcataattatg 1818164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 13390943 - 13391061
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || ||||| |||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||| ||      
T  13390943 aaagtttcatagcatttcgaagtcgtttaaatttcttttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactaacaa 13391041  T
Q  267 gtcaaatttcgttccctaat 286  Q
    ||||||||| ||||||||||    
T  13391042 gtcaaatttagttccctaat 13391061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 158
Target Start/End: Complemental strand, 21360514 - 21360451
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 158  Q
    ||||||||| |||||||||||||||| ||||||| ||||| |||| |||||||||||| |||||    
T  21360514 ataaaggactaaaacgttacctaaaattaagttaagggactatttatgtaattttgccaaaaaa 21360451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 30055488 - 30055555
Alignment:
Q  91 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 158  Q
    ||||| |||||||||||| ||||||||||| ||||||| ||||| | || ||||||||||||||||||    
T  30055488 aaaaaaaaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcctaaaaa 30055555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 346
Target Start/End: Original strand, 49062453 - 49062626
Alignment:
Q  172 tttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaa 271  Q
    ||||||||||||| | ||||  |||||||||||| |||||  ||| |||| |||| ||||||| ||||| ||||| ||| | ||||||||||| ||||||    
T  49062453 tttatagcatttcgaagacgcctcaatttattttgatttttcaactaaaatgtgc-aaaattgcaatttcgttccaagtgatcgtatactcacaggtcaa 49062551  T
Q  272 atttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaa 346  Q
     ||||| || ||| | ||  | ||| |||||||| || ||| ||| |||||| ||||| ||||  ||||||||||    
T  49062552 ttttcgctcactagttttgaaggcaaggttagaatattatatgaaccttcaccatgaaattttagagtttttaaa 49062626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 310 - 393
Target Start/End: Complemental strand, 5290970 - 5290887
Alignment:
Q  310 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    ||||||| |||||||||||| ||||| ||||||||||||| | ||||||| ||||| |||  |  ||| |||||||||||||||    
T  5290970 ataagaaccttcacaatgaaattttggagtttttaaacgataaacaaatttattatgaataatccaagaaattcataattatgg 5290887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 391
Target Start/End: Original strand, 20629019 - 20629245
Alignment:
Q  164 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 263  Q
    |||||||||| |||||||||| | || | ||| || ||||||||||||  ||| ||||  | ||||| ||| |||||| |||| ||||| | ||||||||    
T  20629019 tgcaaagtttcatagcatttcgaagatgtttctatctatttttatttttcaaccaaaacatacaaaa-ttgcaattttattccgagtaaacatatactca 20629117  T
Q  264 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 363  Q
    | | | ||||||  ||| ||| |  |||  |||||||||||||||  |||||| ||| |  |  ||  |||| ||||||||||||||| || ||||||||    
T  20629118 cggatgaaatttaattctctatttctattggcatggttagaacatcgtaagaacctttatcaaaaaaatttggagtttttaaacgagatacgaattaatt 20629217  T
Q  364 ataaattgtttaagtaattcataattat 391  Q
    |  | ||||||||| |||||||||||||    
T  20629218 aagagttgtttaagaaattcataattat 20629245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 353 - 392
Target Start/End: Complemental strand, 26448538 - 26448499
Alignment:
Q  353 acaaattaattataaattgtttaagtaattcataattatg 392  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  26448538 acaaattaattataaattgtttaagaaattcataattatg 26448499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 310 - 389
Target Start/End: Complemental strand, 54933538 - 54933459
Alignment:
Q  310 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatt 389  Q
    |||||||  ||||| ||||| ||||| |||||||||| || | || ||||||||||||||||||| || |||||||||||    
T  54933538 ataagaaatttcaccatgaaattttggagtttttaaatgataaacgaattaattataaattgttttagaaattcataatt 54933459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 281
Target Start/End: Complemental strand, 44157295 - 44157182
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||| ||||  ||||||| |||||||||| ||||  ||||||||||||||||      
T  44157295 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacatgcaaaa-ttgaaattttattccgcgtaagcgtatactcacaa 44157197  T
Q  267 gtcaaatttcgttcc 281  Q
    ||||||||| |||||    
T  44157196 gtcaaatttagttcc 44157182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 389
Target Start/End: Complemental strand, 9070891 - 9070730
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    ||||||| |||||||||   ||||||| |||||| || ||||||| |  |||||||| | || || || || ||||||||| |||| ||||||||| ||     
T  9070891 aaaattgcaattttgttatgagtaagcatatactgacgggtcaaactctgttccctagttttgtaggcttgcttagaacatcataataatcttcaccata 9070792  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatt 389  Q
    || ||||| |||||| ||| ||  ||  ||| |||||| |||||| |||| |||||||||||    
T  9070791 aaattttggagttttgaaatgatggatgaatcaattatgaattgtataagaaattcataatt 9070730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 30799612 - 30799668
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgc 151  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | || |||||||||||    
T  30799612 ataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgc 30799668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 270 - 393
Target Start/End: Original strand, 2941119 - 2941242
Alignment:
Q  270 aaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaat 369  Q
    |||||| |||||||||| || || |||| |||| ||||| |   |||| ||||  ||||| ||||  |||||||||||||| ||  ||| ||||||||||    
T  2941119 aaattttgttccctaattttttaggcatagttaaaacatcaatcgaatattcaacatgaaattttagagtttttaaacgagggatgaataaattataaat 2941218  T
Q  370 tgtttaagtaattcataattatgg 393  Q
    | |||||| ||||| |||||||||    
T  2941219 tatttaagaaattcttaattatgg 2941242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 264
Target Start/End: Complemental strand, 26449393 - 26449291
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| | | || || ||||||||||  ||||  ||  |||| |||||||| |||||||||||||||  ||||||||||||    
T  26449393 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgttttttcaatcaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 26449295  T
Q  261 tcac 264  Q
    ||||    
T  26449294 tcac 26449291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 158
Target Start/End: Complemental strand, 37872824 - 37872761
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 158  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || |||||||||||| |||||    
T  37872824 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgccaaaaaa 37872761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 275
Target Start/End: Complemental strand, 40529698 - 40529651
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaattt 275  Q
    |||||||||||||||||||  ||||||||||||||||  |||||||||    
T  40529698 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaattt 40529651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 46143555 - 46143622
Alignment:
Q  91 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 158  Q
    |||||||||||||||||  |||||||||||  |||||| || || | || ||||||||||||||||||    
T  46143555 aaaaataaaggacgaaagtgttacctaaaataaagttaaggcactaattgtgtaattttgcctaaaaa 46143622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 13294891 - 13294953
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 157  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  13294891 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 13294953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 25297737 - 25297679
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 153  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || |||||||||||||    
T  25297737 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 25297679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 18625554 - 18625603
Alignment:
Q  340 ttttaaacgagagacaaattaattataaattgtttaagtaattcataatt 389  Q
    ||||||||||| |||||||||||||| |||| || ||| |||||||||||    
T  18625554 ttttaaacgagtgacaaattaattatgaatttttaaagaaattcataatt 18625603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 9e-48; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 40081235 - 40081459
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  40081235 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 40081333  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||  | ||||||||||||| ||||||||||||||    
T  40081334 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttataatttttaaacgagatacaaattaattata 40081433  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  40081434 aattgtttaagaaattcataattatg 40081459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 6930389 - 6930613
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  6930389 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 6930487  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||| ||| ||||| ||| ||||||||||| ||||||||||||||    
T  6930488 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaaggaaattttgtagtctttaaacgagatacaaattaattata 6930587  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| | ||||||||||||    
T  6930588 aattgtttaagaagttcataattatg 6930613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 161 - 392
Target Start/End: Original strand, 6268913 - 6269144
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  6268913 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 6269011  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  6269012 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 6269111  T
Q  360 aattataaattgtttaagtaattcataattatg 392  Q
    |||||||||||||||||| ||||||||||||||    
T  6269112 aattataaattgtttaagaaattcataattatg 6269144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 161 - 392
Target Start/End: Original strand, 22967931 - 22968162
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  22967931 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 22968029  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  22968030 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 22968129  T
Q  360 aattataaattgtttaagtaattcataattatg 392  Q
    |||||||||||||||||| ||||||||||||||    
T  22968130 aattataaattgtttaagaaattcataattatg 22968162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 196 - 392
Target Start/End: Complemental strand, 27935818 - 27935624
Alignment:
Q  196 aatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagc 295  Q
    |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| || || ||    
T  27935818 aatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttccctaattttgtaggc 27935720  T
Q  296 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    |||  |||||||| |||||||||||||||||||| ||||| |||||||||||| || |||||||||||| |||||||||||| ||||||||||||||    
T  27935719 atgactagaacattataagaatcttcacaatgaaattttgtagtttttaaacg-gatacaaattaattacaaattgtttaagaaattcataattatg 27935624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 5135959 - 5135735
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | |  || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  5135959 aaagtttcatagcatttcgaagtcatttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 5135861  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||| | |  || |||||  || ||||| ||||||| |||||||||||| ||||| |||||||||| |||| ||||||||||||||    
T  5135860 gtcaaatttagttccctattttcgtaggcatgactataacatgataagaaccttcacaatgaaattttgtagtttttaaatgagatacaaattaattata 5135761  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  5135760 aattgtttaagaaattcataattatg 5135735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 45183651 - 45183428
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  45183651 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 45183553  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  || ||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  45183552 gtcaaatttagttccctaat-ttgtaggcatgactaaaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 45183454  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    |||| |||||| ||||||||||||||    
T  45183453 aattttttaagaaattcataattatg 45183428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 161 - 392
Target Start/End: Complemental strand, 39772470 - 39772239
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  39772470 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 39772372  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||| | | ||||||||||| ||||| |  |||||||||||| |||||||    
T  39772371 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataaggaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 39772272  T
Q  360 aattataaattgtttaagtaattcataattatg 392  Q
    |||||||||||||||||| ||||||||||||||    
T  39772271 aattataaattgtttaagaaattcataattatg 39772239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 6503065 - 6503289
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| ||| |||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  6503065 aaagtttcatatcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 6503163  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  ||||  || ||||||| ||||||| |||| ||| | ||| ||||||||||| ||||||||||||||    
T  6503164 gtcaaatttagttccctaattttgtaggcatgactagagtatgataagaaccttcacagtgaaatttcgtagtctttaaacgagatacaaattaattata 6503263  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  6503264 aattgtttaagaaattcataattatg 6503289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 228 - 392
Target Start/End: Complemental strand, 19390760 - 19390595
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaat 326  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| ||| |||||| || || |||||  |||||||| ||||||| | ||||||||    
T  19390760 aaaattgaaattttgttccgcgtaagcgtatactcaccagtcaaatttagtttcctaattttgtaggcatgactagaacatgataagaaaccttcacaat 19390661  T
Q  327 gaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    ||| ||||| |  |||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  19390660 gaaattttgtaaattttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 19390595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 228 - 392
Target Start/End: Original strand, 19565056 - 19565221
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||| ||||| || || ||||| ||||||||| ||||||| ||||||||||    
T  19565056 aaaattgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttctctaattttgtaggcatgattagaacatgataagaaccttcacaatg 19565155  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 392  Q
    || ||||| |||||||||| |||| ||||||||||||||| || ||||||| ||||||||||||||    
T  19565156 aaattttgtagtttttaaatgagatacaaattaattataagttagtttaagaaattcataattatg 19565221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 197 - 388
Target Start/End: Original strand, 29564674 - 29564868
Alignment:
Q  197 atttatttttattttaaaac-aaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatt---tc--gttccctaatctta 290  Q
    |||||||||||||||  ||| ||||| |||||||| || ||||||||||||||||||||||||||||||  ||||||||   ||  ||||| |||| ||     
T  29564674 atttatttttatttttcaaccaaaaacgtgcaaaattt-aaattttgttcctagtaagcgtatactcacatgtcaaattaaatcatgttccttaattttg 29564772  T
Q  291 taagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataat 388  Q
    || ||||||||||||||||||||||| |||||||||||| ||||  ||||||||||   |||||||||||||||||||||||||||| ||||||||||    
T  29564773 taggcatggttagaacataataagaaccttcacaatgaaattttatagtttttaaa--tgagacaaattaattataaattgtttaagaaattcataat 29564868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 34083615 - 34083838
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  |||||||| ||||||       
T  34083615 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtgtactcagaa 34083713  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    | ||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| | ||||||||||||    
T  34083714 g-caaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatataaattaattata 34083812  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  34083813 aattgtttaagaaattcataattatg 34083838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 228 - 392
Target Start/End: Complemental strand, 45336485 - 45336320
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||||| ||| || || ||||| ||||||||| ||||||| ||| ||||||    
T  45336485 aaaattgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttcccaaattttgtaggcatgattagaacatgataagaacctttacaatg 45336386  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 392  Q
    || ||||| |||||||||| |||| ||||||||||||||| || ||||||| ||||||||||||||    
T  45336385 aaattttgtagtttttaaatgagatacaaattaattataagttagtttaagaaattcataattatg 45336320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 228 - 392
Target Start/End: Complemental strand, 33041561 - 33041400
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||  |||||||||||| ||  |||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| ||    
T  33041561 aaaattgaaattttgttccgcgtaagcgtatacaca--ggtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtg 33041464  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    || ||||| ||| |||||| |||| |||||||||||||||||||||| || ||||||||||||||    
T  33041463 aaattttgtagtctttaaatgagatacaaattaattataaattgttt-agaaattcataattatg 33041400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 164 - 275
Target Start/End: Complemental strand, 8257517 - 8257407
Alignment:
Q  164 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 263  Q
    |||||||||| |||||||||||| |||| |||||||||||||||||||  ||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  8257517 tgcaaagtttcatagcatttcaaagacgtttcaatttatttttatttttcaaccaaaacgtgcaaaa-ttgaaattttgttcctagtaagcgtatactca 8257419  T
Q  264 ctggtcaaattt 275  Q
    | | ||||||||    
T  8257418 cagatcaaattt 8257407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 167 - 362
Target Start/End: Original strand, 11017765 - 11017959
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||| ||      
T  11017765 aaagtttcatagcatttcgaagtcgtttaaatttattatgattttttaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatacttacaa 11017863  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaat 362  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||    
T  11017864 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaat 11017959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 228 - 387
Target Start/End: Complemental strand, 27912615 - 27912456
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    ||||||| ||||||| ||  ||||||| ||||||||  |||||||||| |||||||||  ||  | |||||||| |||||| |||||||  | ||| |||    
T  27912615 aaaattgtaattttgatctgagtaagcatatactcataggtcaaattttgttccctaaatttgcaggcatggttggaacatgataagaacatgcaccatg 27912516  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataa 387  Q
    || ||||| |||||||||||||| |||||||||||||| ||||||||| | |||||||||    
T  27912515 aaattttggagtttttaaacgagggacaaattaattatgaattgtttatgaaattcataa 27912456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 255 - 393
Target Start/End: Complemental strand, 35937806 - 35937668
Alignment:
Q  255 gtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagac 354  Q
    |||||||||| ||||||||| | | |  |||| || || |||| |||||||||| ||||||| |||||| ||||||||||| |||||||||| |||| ||    
T  35937806 gtatactcacgggtcaaattccatcctgtaattttgtaggcatagttagaacatcataagaaccttcaccatgaagttttggagtttttaaaagagatac 35937707  T
Q  355 aaattaattataaattgtttaagtaattcataattatgg 393  Q
    ||||||||||| ||||||||||| || ||||||| ||||    
T  35937706 aaattaattatgaattgtttaagaaactcataataatgg 35937668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 319 - 398
Target Start/End: Complemental strand, 38282936 - 38282857
Alignment:
Q  319 ttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatggaaaat 398  Q
    ||||||||||| | ||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||    
T  38282936 ttcacaatgaaatcttgtagtttttaaacgagatacaaattaattataaattgtttaagaaattcataattatgggaaat 38282857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 310 - 392
Target Start/End: Complemental strand, 8257357 - 8257275
Alignment:
Q  310 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    ||||||| |||||||||||| ||||  ||||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||||    
T  8257357 ataagaaccttcacaatgaaattttaaagtttttaaacgaaagaaaaattaattataaattgcttaagaaattcataattatg 8257275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 337 - 398
Target Start/End: Original strand, 38415473 - 38415534
Alignment:
Q  337 agtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatggaaaat 398  Q
    ||||||||||| |||||||||||||||||||||| |||||  ||||||| ||||||||||||    
T  38415473 agtttttaaactagagacaaattaattataaattatttaacaaattcatgattatggaaaat 38415534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 52091714 - 52091773
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 154  Q
    |||||||||||||| |||||| ||||||||||| |||||| |||| ||||||||||||||    
T  52091714 ataaaggacgaaaaagttaccaaaaaataagttgtgggactatttgtgtaattttgccta 52091773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 248 - 390
Target Start/End: Complemental strand, 7468899 - 7468757
Alignment:
Q  248 agtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaac 347  Q
    ||||||| ||||||||| | ||||||||||| | ||||| ||||| |||| ||||||||||||||| || |||||| |      |||  ||||||||||     
T  7468899 agtaagcttatactcacggttcaaatttcgtcctctaattttataggcatagttagaacataataaaaaccttcacgaaatttctttagagtttttaaat 7468800  T
Q  348 gagagacaaattaattataaattgtttaagtaattcataatta 390  Q
    || | || |||||||||| ||||||| ||| ||||||||||||    
T  7468799 gaaaaacgaattaattatgaattgttaaagaaattcataatta 7468757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 52090939 - 52090881
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 153  Q
    ||||||||| |||||||||||||||||||||||| ||||| |||| | |||||||||||    
T  52090939 ataaaggactaaaacgttacctaaaaataagttaagggactatttatataattttgcct 52090881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 250
Target Start/End: Original strand, 3159292 - 3159388
Alignment:
Q  153 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagt 250  Q
    ||||||| || | |||| ||| |||||||||  | |||| |||||||||||||||||||  ||| |||| |||| |||||||||||||||||||||||    
T  3159292 taaaaacgatctacaaattttcatagcattttgaagacgtttcaatttatttttatttttcaaccaaaatgtgc-aaaattgaaattttgttcctagt 3159388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 3612656 - 3612591
Alignment:
Q  91 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaa 156  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||| | || ||||||||| ||||||    
T  3612656 aaaaataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttacctaaa 3612591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 312 - 393
Target Start/End: Original strand, 19814766 - 19814847
Alignment:
Q  312 aagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    ||||| |||||| ||||| ||||| ||||||||||||||| || ||| |||||| |||| |||||| ||| |||||||||||    
T  19814766 aagaaccttcaccatgaaattttgaagtttttaaacgagatacgaatcaattatgaattttttaagaaatacataattatgg 19814847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 257 - 385
Target Start/End: Original strand, 219189 - 219317
Alignment:
Q  257 atactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaa 356  Q
    |||||||  |||||||||| |||| ||||| || || ||||||||| ||||| | ||||| ||||||  | || ||||| || |||||||||||| | ||    
T  219189 atactcatgggtcaaattttgttctctaattttgtaggcatggttataacatcacaagaaacttcacctttaaattttggagattttaaacgagacaaaa 219288  T
Q  357 attaattataaattgtttaagtaattcat 385  Q
    ||||||| | ||||||||||  |||||||    
T  219289 attaattctgaattgtttaataaattcat 219317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 158
Target Start/End: Complemental strand, 5048446 - 5048383
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 158  Q
    ||||||||  ||||||||| |||||| ||||||| | ||| |||| ||||||||||||||||||    
T  5048446 ataaaggattaaaacgttatctaaaattaagttaagagactatttatgtaattttgcctaaaaa 5048383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 16094646 - 16094693
Alignment:
Q  164 tgcaaagttttatagcatttcaatgacgattcaatttatttttatttt 211  Q
    ||||||||||| ||||||||||| || | |||||||||||||||||||    
T  16094646 tgcaaagttttgtagcatttcaaagaagtttcaatttatttttatttt 16094693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 44506331 - 44506394
Alignment:
Q  94 aataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 157  Q
    ||||||||||||||| ||||||||||| ||||||| ||||  | || |||||||||||| ||||    
T  44506331 aataaaggacgaaaatgttacctaaaattaagttaagggattaattgtgtaattttgcccaaaa 44506394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 236 - 374
Target Start/End: Original strand, 10842155 - 10842293
Alignment:
Q  236 aattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 335  Q
    ||||||||||| ||||| | |||| ||||  ||||||||| ||||| |||   | || |||| |||| ||||| | |||||||||||| |||||  |||     
T  10842155 aattttgttccaagtaaacatatagtcacgtgtcaaattttgttccgtaactatttaggcattgttataacatgacaagaatcttcaccatgaaagttta 10842254  T
Q  336 cagtttttaaacgagagacaaattaattataaattgttt 374  Q
     | ||||||||||||  |  |||||||||||||||||||    
T  10842255 gaatttttaaacgaggaattaattaattataaattgttt 10842293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 153
Target Start/End: Complemental strand, 17574434 - 17574372
Alignment:
Q  91 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 153  Q
    |||||||||||||||||  ||||||||||| |||||||  |||| | || |||||||||||||    
T  17574434 aaaaataaaggacgaaagtgttacctaaaattaagttaatggacgaattgtgtaattttgcct 17574372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 157
Target Start/End: Original strand, 22975629 - 22975695
Alignment:
Q  91 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 157  Q
    |||||||||||||||||  |||||||||||  |||||| ||||| | || |||||||||| ||||||    
T  22975629 aaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgtctaaaa 22975695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 356 - 398
Target Start/End: Complemental strand, 40368715 - 40368673
Alignment:
Q  356 aattaattataaattgtttaagtaattcataattatggaaaat 398  Q
    ||||| |||| ||||||||||| ||||||||||||||||||||    
T  40368715 aattatttatgaattgtttaagaaattcataattatggaaaat 40368673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 296 - 393
Target Start/End: Complemental strand, 5177420 - 5177323
Alignment:
Q  296 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    |||||||||  || |||||||| ||||  ||||| ||||  |||||||||| || |||  |||||| ||||||||||||||  |||||| ||||||||    
T  5177420 atggttagagaatcataagaattttcatcatgaaattttaaagtttttaaatgatagatgaattaagtataaattgtttaacaaattcaaaattatgg 5177323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 9e-48; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 45419254 - 45419030
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  45419254 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 45419156  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  45419155 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 45419056  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  45419055 aattgtttaagaaattcataattatg 45419030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 153 - 390
Target Start/End: Original strand, 7072016 - 7072252
Alignment:
Q  153 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaa 252  Q
    |||||| ||| || ||||||| |||||||||| |   ||||| |||||||||| |||||  ||| |||| |||||||| ||||||||||||||   ||||    
T  7072016 taaaaataatatgtaaagtttcatagcatttcgaaatcgattaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttcagcgtaa 7072114  T
Q  253 gcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagag 352  Q
    |||||||| |||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||| ||||||| ||||| |||| ||||||||||     
T  7072115 gcgtatacccacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcccaatgaaattttgtagttattaaacgagat 7072214  T
Q  353 acaaattaattataaattgtttaagtaattcataatta 390  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  7072215 acaaattaattataaattgtttaagaaattcataatta 7072252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 161 - 392
Target Start/End: Original strand, 17444528 - 17444759
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  17444528 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 17444626  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  17444627 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaaccttcacaatgaaattttgtaaattttaaacgagatacaaatt 17444726  T
Q  360 aattataaattgtttaagtaattcataattatg 392  Q
    |||||||||||||||||| ||||||||||||||    
T  17444727 aattataaattgtttaagaaattcataattatg 17444759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 228 - 392
Target Start/End: Original strand, 31581175 - 31581339
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    ||||||||||||||||| |  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  31581175 aaaattgaaattttgtttcgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 31581274  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    || ||||| | ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  31581275 aaattttgtaatttttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 31581339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 161 - 392
Target Start/End: Original strand, 41251121 - 41251352
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  41251121 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 41251219  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  41251220 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 41251319  T
Q  360 aattataaattgtttaagtaattcataattatg 392  Q
    |||||||||||||||||| ||||||||||||||    
T  41251320 aattataaattgtttaagaaattcataattatg 41251352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 35963363 - 35963139
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| ||||||| || | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  35963363 aaagtttcatagcatatcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 35963265  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| | ||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  35963264 gtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 35963165  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||  ||||||||||||||    
T  35963164 aattgtttaataaattcataattatg 35963139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 161 - 392
Target Start/End: Original strand, 6403291 - 6403522
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  6403291 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 6403389  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  6403390 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 6403489  T
Q  360 aattataaattgtttaagtaattcataattatg 392  Q
    |||||||||||||||||| ||||||||||||||    
T  6403490 aattataaattgtttaagaaattcataattatg 6403522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 228 - 392
Target Start/End: Original strand, 12756393 - 12756557
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||   |||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| ||    
T  12756393 aaaattgaaattttgttccgcataagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtg 12756492  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    || ||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  12756493 aaattttgtagtctttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 12756557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 228 - 392
Target Start/End: Complemental strand, 18982202 - 18982038
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||| |||    
T  18982202 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacgatg 18982103  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    || ||||| | ||||||||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  18982102 aaattttgtaatttttaaacgagataaaaattaattataaattgtttaagaaattcataattatg 18982038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 167 - 390
Target Start/End: Original strand, 4554689 - 4554910
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| ||| |||||| ||| || || |||||||||||||||| || ||||||| ||||||| |||||||||||||||  | ||||||||||| ||      
T  4554689 aaagtttcataacatttcgatgtcgtttaaatttatttttattttcaaccaaaaag-tgcaaaa-ttgaaattttgttccacgcaagcgtatactaacaa 4554786  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    |||||||||  ||| ||||| || || |||||  |||||||| |||||||  ||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  4554787 gtcaaatttaattctctaattttgtaggcatgactagaacatgataagaacattcacaatgaaattttgtagtttttaaacgagatacaaattaattata 4554886  T
Q  367 aattgtttaagtaattcataatta 390  Q
    ||||||||||| ||||| ||||||    
T  4554887 aattgtttaagaaattcttaatta 4554910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 167 - 390
Target Start/End: Original strand, 32126683 - 32126905
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| ||| ||||||||||||||||||||  ||||||||||||||||      
T  32126683 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtg-aaaaattgaaattttgttccgcgtaagcgtatactcacaa 32126781  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| |||| || ||||| | |||| ||||| | ||||||||||||| ||||||||||||||    
T  32126782 gtcaaatttagttccctaattttgtaggcatgactagaacatgataataaccttcaaagtgaaattttgtaatttttaaacgagatacaaattaattata 32126881  T
Q  367 aattgtttaagtaattcataatta 390  Q
    ||||||||||| ||||||||||||    
T  32126882 aattgtttaagaaattcataatta 32126905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 228 - 392
Target Start/End: Original strand, 2957700 - 2957864
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| || |||||||    
T  2957700 aaaattgaaattttgttccgcgtaagggtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaacctacacaatg 2957799  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    || ||||| | ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  2957800 aaattttgtaatttttaaacgagatacaaattaattataaattgtttaagaaattcataaatatg 2957864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 2286460 - 2286237
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||  | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  2286460 aaagtttcatagcattttgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgtgtaagcgtatactcacaa 2286362  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    | ||||||| ||| |||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| |||| |||||||||    
T  2286361 g-caaatttagtttcctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatacaacttaattata 2286263  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  2286262 aattgtttaagaaattcataattatg 2286237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 26162198 - 26162422
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| ||| |||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||| ||||      
T  26162198 aaagtttcatatcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatagtcacaa 26162296  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || | |||  |||||||| ||||| | ||||| |||||| ||||| ||||||||||||||| |||||||| |||||    
T  26162297 gtcaaatttagttccctaattttgtaggtatgactagaacatgataaggaccttcagaatgaaattttgtagtttttaaacgagatacaaattagttata 26162396  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||  ||||||||||||||    
T  26162397 aattgtttaaaaaattcataattatg 26162422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 229 - 393
Target Start/End: Original strand, 37621618 - 37621782
Alignment:
Q  229 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 328  Q
    |||||| ||||||||||| ||||||| |||||||||   ||||| |  |||| ||||| || || ||||||||||||||| ||||||| |||||||||||    
T  37621618 aaattgcaattttgttccgagtaagcatatactcacgaatcaaagtctgttctctaattttgtaggcatggttagaacatcataagaaccttcacaatga 37621717  T
Q  329 agttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    | ||||| ||||||||||||||| || |||||||||| |||| |||||| |||||||||||||||    
T  37621718 aattttgaagtttttaaacgagatacgaattaattatgaattatttaagaaattcataattatgg 37621782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 164 - 386
Target Start/End: Complemental strand, 26591716 - 26591496
Alignment:
Q  164 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 263  Q
    ||||||||||  ||||||||||| ||   |||||||||||||||||||  ||| |||| |||| ||| ||| ||||||| ||| ||||| ||||||||||    
T  26591716 tgcaaagtttcgtagcatttcaaagatatttcaatttatttttatttttcaaccaaaacgtgcgaaa-ttgcaattttgatccgagtaaacgtatactca 26591618  T
Q  264 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 363  Q
      ||||||||| | ||| ||||| || || ||||||||||| |||| |||||| |||||| | ||| ||||  ||||||||||||||| |||||||||||    
T  26591617 tgggtcaaattccattctctaattttttaggcatggttagaccata-taagaaccttcaccaagaaattttagagtttttaaacgagatacaaattaatt 26591519  T
Q  364 ataaattgtttaagtaattcata 386  Q
    || ||||||||||| ||||||||    
T  26591518 atgaattgtttaagaaattcata 26591496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 177 - 387
Target Start/End: Complemental strand, 18829518 - 18829309
Alignment:
Q  177 agcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttc 276  Q
    |||||||||| |||| ||| ||||||||| |||||  ||| |||| |||| ||| ||| ||||||||||| |||||| |||||||||| ||||||||| |    
T  18829518 agcatttcaaagacgtttcgatttattttaatttttcaacgaaaacgtgcgaaa-ttgcaattttgttccgagtaagtgtatactcacgggtcaaattcc 18829420  T
Q  277 gttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaa 376  Q
    |||| ||||| || || |||| |||||||||| |||||||  |||||  |||| ||| | ||||||||||| | | || |||||||||| ||||||||||    
T  18829419 gttctctaattttgtaggcatagttagaacatcataagaacattcaccgtgaaatttagaagtttttaaacaatatacgaattaattatgaattgtttaa 18829320  T
Q  377 gtaattcataa 387  Q
    | |||||||||    
T  18829319 gaaattcataa 18829309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 249 - 390
Target Start/End: Complemental strand, 26238531 - 26238390
Alignment:
Q  249 gtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacg 348  Q
    ||||||||||||||||  | ||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| |||||||||| |    
T  26238531 gtaagcgtatactcacaaggcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtttttaaatg 26238432  T
Q  349 agagacaaattaattataaattgtttaagtaattcataatta 390  Q
    ||| |||||||||||||||||||||||   ||||||||||||    
T  26238431 agatacaaattaattataaattgtttataaaattcataatta 26238390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 228 - 392
Target Start/End: Complemental strand, 42442597 - 42442433
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    ||||||||||||||||||   ||||||||||||||||  ||||||||| ||||| |||| || || |||||  |||||||| |||||||  |||||||||    
T  42442597 aaaattgaaattttgttctgcgtaagcgtatactcacaagtcaaatttagttccataattttgtaggcatgactagaacatgataagaacattcacaatg 42442498  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    || ||||  | ||||||||||||| | ||||||| ||||||||||||||| ||||||||| ||||    
T  42442497 aaattttataatttttaaacgagatataaattaactataaattgtttaagaaattcataaatatg 42442433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 256 - 392
Target Start/End: Original strand, 44084185 - 44084321
Alignment:
Q  256 tatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagaca 355  Q
    |||||||||  ||||||||| |||||||||| || || |||||  ||||| || |||| || |||||||||||| ||||| ||||||||||||||| |||    
T  44084185 tatactcacaagtcaaatttagttccctaattttgtaggcatgactagaaaatgataataaccttcacaatgaaattttgtagtttttaaacgagataca 44084284  T
Q  356 aattaattataaattgtttaagtaattcataattatg 392  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  44084285 aattaattataaattatttaagaaattcataattatg 44084321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 196 - 353
Target Start/End: Complemental strand, 45121851 - 45121695
Alignment:
Q  196 aatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagc 295  Q
    |||||||||| |||||  ||| |||| ||| |||||||||||||||||||| |||||||||||||||||  ||||||||| |||||||||| || || |     
T  45121851 aatttattttgatttttcaaccaaaacgtg-aaaaattgaaattttgttccaagtaagcgtatactcacatgtcaaatttagttccctaattttgtacgt 45121753  T
Q  296 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagaga 353  Q
    |||  || ||||| ||||||| |||||||||||| ||||| ||||||||||| |||||    
T  45121752 atgactaaaacatgataagaaacttcacaatgaaattttgtagtttttaaacaagaga 45121695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 276 - 392
Target Start/End: Complemental strand, 21556659 - 21556543
Alignment:
Q  276 cgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgttta 375  Q
    ||||| ||||| || || |||||||| |||||| ||||||| |||||| ||||| ||||| ||||||||||||||| ||||||||||||| |||||||||    
T  21556659 cgttctctaattttgtaggcatggttggaacatcataagaaccttcaccatgaaattttggagtttttaaacgagatacaaattaattatgaattgttta 21556560  T
Q  376 agtaattcataattatg 392  Q
    || ||||||||||||||    
T  21556559 agaaattcataattatg 21556543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 228 - 392
Target Start/End: Original strand, 816613 - 816777
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    ||||||| |||||| || | |||||||||||||| || |||||||||| ||| |||||| || || |||||||  || ||| |||||||   ||||  ||    
T  816613 aaaattgcaattttatttcgagtaagcgtatacttacgggtcaaattttgtttcctaattttgtaggcatggtaggagcattataagaactatcactttg 816712  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    || ||||| |||||||||| |||||||||||||||||| ||||||||||  ||||||||||||||    
T  816713 aaattttggagtttttaaaggagagacaaattaattatgaattgtttaaaaaattcataattatg 816777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 229 - 392
Target Start/End: Original strand, 17373394 - 17373558
Alignment:
Q  229 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggtt-agaacataataagaatcttcacaatg 327  Q
    |||||| ||||||||||| | ||||||||||||||| ||||||||||| ||| ||||| || || |||||||| | ||||| |||||||  ||||| |||    
T  17373394 aaattgcaattttgttccaaataagcgtatactcacgggtcaaatttcattctctaattttgtaggcatggttaaaaacatcataagaacattcaccatg 17373493  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    || ||||| ||||| |||| | || || |||||||||  |||| |||| | ||||||||||||||    
T  17373494 aaattttggagtttctaaatgtgatacgaattaattacgaattttttaggaaattcataattatg 17373558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 199 - 392
Target Start/End: Original strand, 8058871 - 8059052
Alignment:
Q  199 ttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatg 298  Q
    ||||||| |||||  ||| |||| |||||||| || ||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||    
T  8058871 ttattttgatttttcaaccaaaacgtgcaaaa-ttaaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatg 8058969  T
Q  299 gttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
               ||||||| |||| ||||||| ||| | ||| ||||||| |||  |||||||||||||||||||||||| ||||||||||||||    
T  8058970 -----------ataagaaccttcccaatgaaatttcgtagtctttaaacaagatgcaaattaattataaattgtttaagaaattcataattatg 8059052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 250 - 394
Target Start/End: Complemental strand, 25391568 - 25391425
Alignment:
Q  250 taagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacga 349  Q
    ||||| |||||||| |||||||||||| ||| ||||| || || ||||||||||||||| ||||| |  ||||| || || ||||| |||||||||| ||    
T  25391568 taagcatatactca-tggtcaaatttcattcactaattttgtaggcatggttagaacatcataagtactttcaccataaaattttggagtttttaaagga 25391470  T
Q  350 gagacaaattaattataaattgtttaagtaattcataattatgga 394  Q
    || | || |||||||| ||||||||||  |||| |||||||||||    
T  25391469 gaaataagttaattatgaattgtttaaaaaatttataattatgga 25391425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 320 - 392
Target Start/End: Original strand, 15441832 - 15441904
Alignment:
Q  320 tcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    |||| ||||| ||||| | |||||||| |||| ||||||||||||| ||||||||||| ||||||||||||||    
T  15441832 tcaccatgaaattttggattttttaaatgagacacaaattaattatgaattgtttaagaaattcataattatg 15441904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 8322471 - 8322530
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 154  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | |||||||||||||||||    
T  8322471 ataaaggacgaaaatgttacctaaaattaagttaagggacgaattctgtaattttgccta 8322530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 27360410 - 27360473
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 158  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || ||||||||||||||||||    
T  27360410 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaaa 27360473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 238 - 392
Target Start/End: Complemental strand, 37226654 - 37226501
Alignment:
Q  238 ttttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgca 337  Q
    ||||||||  |||||||  |||||||  ||||||||||| ||||||||| |||  ||| |  ||| ||||||||||||| ||| || ||||| ||| | |    
T  37226654 ttttgttcggagtaagcaaatactcatgggtcaaatttctttccctaattttactagcttacttataacataataagaaactttaccatgaaatttagaa 37226555  T
Q  338 gtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    | |||||||| || ||| || ||| ||| ||||||||||  ||||||||||||||    
T  37226554 gattttaaacaagggacgaa-taaatatgaattgtttaataaattcataattatg 37226501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 30337717 - 30337777
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 155  Q
    ||||||||||| || |||| |||||| ||||||| ||||| | ||||||||||||||||||    
T  30337717 ataaaggacgataatgttatctaaaattaagttaagggactaattctgtaattttgcctaa 30337777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 3843980 - 3844034
Alignment:
Q  339 tttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    ||||||||  || |||||||||||| | |||||||||| ||||||||||||||||    
T  3843980 tttttaaattagggacaaattaattgtgaattgtttaaataattcataattatgg 3844034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 17846065 - 17846007
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 153  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || |||||||||||||    
T  17846065 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcct 17846007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 359 - 392
Target Start/End: Complemental strand, 8147832 - 8147799
Alignment:
Q  359 taattataaattgtttaagtaattcataattatg 392  Q
    ||||||||||||||||||| ||||||||||||||    
T  8147832 taattataaattgtttaagaaattcataattatg 8147799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 30337481 - 30337424
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 152  Q
    |||||||||||||| ||||||||||| |||||||  |||| | || ||||||||||||    
T  30337481 ataaaggacgaaaatgttacctaaaattaagttaatggactaattgtgtaattttgcc 30337424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 2e-45; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 28997401 - 28997177
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  28997401 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaatgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 28997303  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||| || |||| ||||| ||| ||||||||||| ||||||||||||||    
T  28997302 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcgcagtgaaattttgtagtctttaaacgagatacaaattaattata 28997203  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  28997202 aattgtttaagaaattcataattatg 28997177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 167 - 390
Target Start/End: Original strand, 34948277 - 34948499
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| ||||||| || | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  34948277 aaagtttcatagcatatcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 34948375  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| | ||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  34948376 gtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 34948475  T
Q  367 aattgtttaagtaattcataatta 390  Q
    ||||||||||| ||||||||||||    
T  34948476 aattgtttaagaaattcataatta 34948499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 161 - 392
Target Start/End: Complemental strand, 399297 - 399066
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  399297 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 399199  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  399198 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 399099  T
Q  360 aattataaattgtttaagtaattcataattatg 392  Q
    |||||||||||||||||| ||||||||||||||    
T  399098 aattataaattgtttaagaaattcataattatg 399066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 228 - 392
Target Start/End: Original strand, 33228891 - 33229056
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||  ||||| ||| ||||||  ||||||||| |||||||||| ||  | |||||  |||||||| ||||||| ||||||||||    
T  33228891 aaaattgaaattttgttccgcgtaagtgtacactcacaagtcaaatttagttccctaattttgcaggcatgactagaacatgataagaaccttcacaatg 33228990  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 392  Q
    || ||||| ||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||    
T  33228991 aaattttgtagtttttaaacgagatacaaattaattataaattagtttaagaaattcataattatg 33229056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 228 - 392
Target Start/End: Complemental strand, 29743896 - 29743731
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||  ||||| ||||||||||  |||||||||  ||||||||| || || ||||| || |||||| |||||||  |||||||||    
T  29743896 aaaattgaaattttgttccgcgtaagtgtatactcacaagtcaaatttaattccctaattttgtaggcatgattggaacatgataagaacattcacaatg 29743797  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 392  Q
    || ||||| ||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  29743796 aaattttgtagtttttaaacgagatacaaattaattataagttagtttaagaaattcataattatg 29743731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 164 - 398
Target Start/End: Complemental strand, 28931683 - 28931450
Alignment:
Q  164 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 263  Q
    ||||||||||  ||||||||||| |||  ||| ||||||||| |||||  ||| |||| |||| ||| ||| |||||||||||  ||||||||||||| |    
T  28931683 tgcaaagtttcgtagcatttcaaagacatttcgatttattttaatttttgaaccaaaatgtgcgaaa-ttgcaattttgttccgtgtaagcgtatactta 28931585  T
Q  264 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 363  Q
    | ||||||||||||||| ||||| || || ||||||||||||  | |||| ||||||||  ||| | ||||| ||||||||||| ||| | |||||||||    
T  28931584 cgggtcaaatttcgttctctaattttgtaggcatggttagaaggtcataacaatcttcaacatgcaattttgaagtttttaaacaagataaaaattaatt 28931485  T
Q  364 ataaattgtttaagtaattcataattatggaaaat 398  Q
    || |||| |||| | ||||||||||||||| ||||    
T  28931484 atgaattatttacgaaattcataattatgggaaat 28931450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 13838472 - 13838245
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcac-- 264  Q
    ||||||| ||| |||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  13838472 aaagtttcataacatttcgaagtcgtttaaatttattttgatttttcaactaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 13838374  T
Q  265 -tggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 363  Q
     || || ||||| |||||||||| || ||  ||||  | ||||   ||||||| |||||||||||| ||||| | ||||||||||| | |||||||||||    
T  13838373 gtgatcgaatttagttccctaattttgtagacatgactggaactagataagaaccttcacaatgaaattttgtaatttttaaacgatatacaaattaatt 13838274  T
Q  364 ataaattgtttaagtaattcataattatg 392  Q
    |||||||||||||  ||||||||||||||    
T  13838273 ataaattgtttaataaattcataattatg 13838245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 164 - 393
Target Start/End: Complemental strand, 10231975 - 10231747
Alignment:
Q  164 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 263  Q
    |||||| ||| |||| ||||||| || | ||| |||| ||||||||||  ||| |||| |||  ||| ||| ||||||||||  ||||| | |||| |||    
T  10231975 tgcaaaatttcatagtatttcaaagatgtttcgatttctttttatttttcaaccaaaacgtgtgaaa-ttgcaattttgttctgagtaaacatatattca 10231877  T
Q  264 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 363  Q
    |  |||||||||||||  ||||| || || ||||||||||||||  ||||||| |||||| ||||| ||||| || ||||||| |||| || ||||||||    
T  10231876 cgagtcaaatttcgttttctaattttctaggcatggttagaacaacataagaaccttcaccatgaaattttgaagattttaaatgagatacgaattaatt 10231777  T
Q  364 ataaattgtttaagtaattcataattatgg 393  Q
    || ||||||||||| |||||||||||||||    
T  10231776 attaattgtttaagaaattcataattatgg 10231747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 166 - 316
Target Start/End: Complemental strand, 23217600 - 23217452
Alignment:
Q  166 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 265  Q
    |||||||| ||| |||||| | || | || |||||||||||||||| || ||||| | || ||||||||||||||||||||||||||  ||||||||       
T  23217600 caaagtttcatatcatttcgaagatgttttaatttatttttatttttaaccaaaacg-tg-aaaaattgaaattttgttcctagtaattgtatactctta 23217503  T
Q  266 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaa 316  Q
    |||||||||||||||| |||| || || |||||||||||||||||||||||    
T  23217502 ggtcaaatttcgttccttaattttgtaggcatggttagaacataataagaa 23217452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 21424643 - 21424700
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21424643 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 21424700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 236 - 398
Target Start/End: Original strand, 31373247 - 31373409
Alignment:
Q  236 aattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 335  Q
    ||||||||| | |||| || |||||| || | |||||||  |||||||||| || || ||| ||||| ||||| ||||||| ||||||||  || |||||    
T  31373247 aattttgtttcgagtaggcatatactaacggatcaaattcagttccctaattttgtaggcaaggttaaaacatcataagaaccttcacaacaaaattttg 31373346  T
Q  336 cagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatggaaaat 398  Q
     |||||||||||||| ||  |||||||||| ||||||||||| ||||||||||| ||| ||||    
T  31373347 aagtttttaaacgagtgatgaattaattatgaattgtttaagaaattcataattttgggaaat 31373409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 21419364 - 21419308
Alignment:
Q  99 aggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 155  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  21419364 aggacgaaaacgttacctaaaaataagttataggaccatttgtgtaattttgcctaa 21419308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 341 - 392
Target Start/End: Complemental strand, 18339592 - 18339541
Alignment:
Q  341 tttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  18339592 tttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 18339541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 239 - 393
Target Start/End: Complemental strand, 12098590 - 12098436
Alignment:
Q  239 tttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcag 338  Q
    |||||||| ||||||| ||||||||  | ||||||||| ||||||  | || ||  ||||||| |||||| | || || ||| || ||||| ||||  ||    
T  12098590 tttgttccgagtaagcatatactcaaggatcaaatttcattcccttgttttttagacatggtttgaacatcaaaaaaacctttaccatgaaattttaaag 12098491  T
Q  339 tttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    |||||||| | | |||||||||||||| |||| |||||| |||||||||||||||    
T  12098490 tttttaaatgcgggacaaattaattatgaattatttaagaaattcataattatgg 12098436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 239 - 393
Target Start/End: Original strand, 12849947 - 12850101
Alignment:
Q  239 tttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcag 338  Q
    |||||||| ||||||  |||| |||| | ||||||||  ||||||  | || || |||||||| |||||| | ||||| ||| || ||||| ||||  ||    
T  12849947 tttgttccgagtaagtatatattcacggatcaaattttattcccttcttttttaggcatggtttgaacatcaaaagaacctttaccatgaaattttagag 12850046  T
Q  339 tttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    |||||||| | | || ||||||||||| ||||||||||| |||||||||||||||    
T  12850047 tttttaaatgcgggataaattaattatgaattgtttaagaaattcataattatgg 12850101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 21424504 - 21424549
Alignment:
Q  18 gaagaagcttgtgtgaacattggagaagatgaacataaagttaaat 63  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  21424504 gaagaagcttgtgtgaacattggagaagatgaacataacgttaaat 21424549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 10026197 - 10026140
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 152  Q
    ||||||||| |||||||||||||||| ||||||| ||||| |||| ||||||||||||    
T  10026197 ataaaggactaaaacgttacctaaaattaagttaagggactatttatgtaattttgcc 10026140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 22814710 - 22814801
Alignment:
Q  299 gttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 390  Q
    |||||||||| ||||||| |  ||| ||||| ||||  |||||||||| || |||| |||||||||| ||||||||||| |||||| |||||    
T  22814710 gttagaacatcataagaaccgccaccatgaaattttcaagtttttaaatgatagacgaattaattatgaattgtttaagaaattcaaaatta 22814801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 337 - 398
Target Start/End: Original strand, 4335187 - 4335248
Alignment:
Q  337 agtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatggaaaat 398  Q
    ||||||| ||||||  ||||||||||||| ||||||||||| ||||||||||| | ||||||    
T  4335187 agtttttgaacgaggaacaaattaattatgaattgtttaagaaattcataattgttgaaaat 4335248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 10027124 - 10027184
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 155  Q
    ||||||||| |||| ||||||||||| ||||||| ||||| |||| ||||||| |||||||    
T  10027124 ataaaggaccaaaatgttacctaaaattaagttaagggactatttatgtaattatgcctaa 10027184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 393
Target Start/End: Complemental strand, 11797172 - 11796942
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||||||||||| ||||||||||||  | |  || |||||||||||||||  |||  ||| |||| ||| |||  |||| ||| | ||||||| |||||    
T  11797172 atttgcaaagtttgatagcatttcaaatatgtctcgatttatttttatttttcaaccgaaacgtgcgaaa-ttgttattt-gtttcgagtaagcatatac 11797075  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatta 360  Q
    |||| | ||||||| ||||||||  | || ||  ||||||| | |||| |||||||| | ||  ||||| ||||  |||||||||||  |  ||||||||    
T  11797074 tcacggatcaaattgcgttcccttgttttttagacatggtttggacatcataagaatttacatcatgaaattttagagtttttaaacacggaacaaatta 11796975  T
Q  361 attataaattgtttaagtaattcataattatgg 393  Q
    ||||| |||| |||||| |||| ||||| ||||    
T  11796974 attatgaattatttaagaaatttataatgatgg 11796942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 304 - 370
Target Start/End: Complemental strand, 4335318 - 4335252
Alignment:
Q  304 aacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaatt 370  Q
    ||||| |||| || |||||| || || ||||| ||||||||||||||||| ||||||||||| ||||    
T  4335318 aacatcataataaacttcaccattaaattttgtagtttttaaacgagagataaattaattatcaatt 4335252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 33595608 - 33595670
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 157  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  33595608 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 33595670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 2e-45; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 15959441 - 15959665
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||||| |  | || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||   ||||||||||||||| |    
T  15959441 aaagtttcatagcatttcaaagttgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcataagcgtatactcacag 15959539  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||| ||| || || |||||  |||||||| ||||||| |||||||||||| ||||| ||||||||||||||   |||||||||||||    
T  15959540 gtcaaatttagttcccaaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtttttaaacgagctgcaaattaattata 15959639  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||| ||||| ||||||||||||||    
T  15959640 aattgattaagaaattcataattatg 15959665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 31681038 - 31680814
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  31681038 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 31680940  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||| || |||| ||||| ||| ||||||||||| ||||||||||||||    
T  31680939 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcgcagtgaaattttgtagtctttaaacgagatacaaattaattata 31680840  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  31680839 aattgtttaagaaattcataattatg 31680814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 33430992 - 33430768
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  33430992 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 33430894  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||| || |||| ||||| ||| ||||||||||| ||||||||||||||    
T  33430893 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcgcagtgaaattttgtagtctttaaacgagatacaaattaattata 33430794  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  33430793 aattgtttaagaaattcataattatg 33430768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 229 - 393
Target Start/End: Complemental strand, 192517 - 192353
Alignment:
Q  229 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 328  Q
    |||||||||||||||||| ||||| ||||||||||  |||||||||| |||||||||| ||||| |||||   ||||||| ||||||| ||| |||||||    
T  192517 aaattgaaattttgttccgagtaaacgtatactcataggtcaaatttagttccctaattttataggcatgacgagaacatgataagaaccttaacaatga 192418  T
Q  329 agttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    | ||||| |||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||    
T  192417 aattttgtagtttttaaatgagatacaaattaattataaattgtttaagaaattcataattatgg 192353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 228 - 387
Target Start/End: Complemental strand, 23034586 - 23034427
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||| |||| |||| || || ||||| ||| |||||||||||||  ||||||||     
T  23034586 aaaattaaaattttgttcctagtaagcgtatactcacaggtcaaatttcattccttaattttgtaggcatgattataacataataagaactttcacaatt 23034487  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataa 387  Q
    || ||||  |||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  23034486 aaattttatagttttaaaacgagagacaaattaattataaattgtttaagaaattcataa 23034427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 13818650 - 13818426
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||   ||| |||||||| ||||| |||||||||  ||||||||||||||||      
T  13818650 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaattgaaacgtgcaaaa-ttgaagttttgttccgcgtaagcgtatactcacaa 13818552  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  13818551 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 13818452  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    || |||||||| ||||||||||||||    
T  13818451 aactgtttaagaaattcataattatg 13818426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 31501214 - 31501438
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | |  | || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  31501214 aaagtttcatagcatttcgaagttgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 31501312  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| | |||||||||| || || ||| ||||||| ||| ||||||||||||||    
T  31501313 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccatcacaatgaaattatgtagtctttaaacaagatacaaattaattata 31501412  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  31501413 aattgtttaagaaattcataattatg 31501438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 161 - 390
Target Start/End: Original strand, 26282805 - 26283034
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  26282805 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 26282903  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  26282904 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 26283003  T
Q  360 aattataaattgtttaagtaattcataatta 390  Q
    |||||||||||||||||| ||||||||||||    
T  26283004 aattataaattgtttaagaaattcataatta 26283034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 39657022 - 39657249
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcac-- 264  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||| ||||||||||      
T  39657022 aaagtttcatagcatttcgaagtcgtttaaatttattttgattttttaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaa 39657120  T
Q  265 -tggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 363  Q
     || |||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| |||||||||||    
T  39657121 gtgatcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaatt 39657220  T
Q  364 ataaattgtttaagtaattcataattatg 392  Q
    |||||||||||||  ||||||||||||||    
T  39657221 ataaattgtttaataaattcataattatg 39657249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 228 - 392
Target Start/End: Complemental strand, 31272018 - 31271854
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||||| ||| ||||||||||  |||||| || |||| ||||| |  ||  ||||| |||||||||||||||| ||||| |||     
T  31272018 aaaattgaaattttgttcctagcaagtgtatactcacaagtcaaaatttgttcactaatttggtagccatggctagaacataataagaaccttcagaata 31271919  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  31271918 aagtttttcagttttgaaacgagagacaaattaattataaatggtttaagaaattcataattatg 31271854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 161 - 392
Target Start/End: Original strand, 36293108 - 36293339
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  36293108 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 36293206  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
    ||||  ||||||||| ||| |||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  36293207 tcacaagtcaaatttagtttcctaattttgtaggcatgactagaacatgataagaaaccttcacaatgaaattttgtaaattttaaacgagatacaaatt 36293306  T
Q  360 aattataaattgtttaagtaattcataattatg 392  Q
    ||||||||||| |||||| ||||||||||||||    
T  36293307 aattataaattatttaagaaattcataattatg 36293339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 1775871 - 1776094
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  1775871 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactcaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 1775969  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    | |||||||  ||| ||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| ||| ||||||||||    
T  1775970 g-caaatttaattctctaattttttaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatacagattaattata 1776068  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  1776069 aattgtttaagaaattcataattatg 1776094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 16333395 - 16333619
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| ||||||| || | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  16333395 aaagtttcatagcatatcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 16333493  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || ||||||||  || || || ||||||| |||| ||||||| ||||| | ||||||||| ||| ||||||||||||||    
T  16333494 gtcaaatttagttccctaattttgtaagcatgactaaaatatgataagaaccttcccaatgaaattttgtaatttttaaacaagatacaaattaattata 16333593  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    |||| |||||| ||||||||||||||    
T  16333594 aattttttaagaaattcataattatg 16333619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 248 - 392
Target Start/End: Complemental strand, 10034495 - 10034351
Alignment:
Q  248 agtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaac 347  Q
    |||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||  | |||||||||    
T  10034495 agtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttataatttttaaac 10034396  T
Q  348 gagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||    
T  10034395 gagatacaaattaattataaattgtttaagaaattcataattatg 10034351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 228 - 392
Target Start/End: Original strand, 12278412 - 12278576
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||| ||||||||||||  ||||||| ||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| ||    
T  12278412 aaaattaaaattttgttccgcgtaagcgaatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtg 12278511  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatg 392  Q
    || ||||| | | ||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  12278512 aaattttgtaatctttaaacgagatacaaattaattataaattgtttaagaaattcataattatg 12278576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 195 - 393
Target Start/End: Original strand, 38268944 - 38269130
Alignment:
Q  195 caatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataag 294  Q
    ||||||||||| |||||  ||| |||| |||||||| ||||||||||||||| |||||||||||||| || |||||||||| |||||||||| || || |    
T  38268944 caatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgagtaagcgtatacttacaggtcaaatttagttccctaattttgtagg 38269042  T
Q  295 catggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    ||||           ||||||| |||||||||||| ||||| |||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||    
T  38269043 catg-----------ataagaaccttcacaatgaaattttgtagtttttatacgagatacaaattaattataaattgtttaagaaattcataattatgg 38269130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 228 - 390
Target Start/End: Complemental strand, 37255216 - 37255054
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||  | ||    
T  37255216 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttccgagtg 37255117  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataatta 390  Q
    || ||||| ||| ||||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  37255116 aaattttgtagtctttaaacgagatacaaattaattataaattatttaagaaattcataatta 37255054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 167 - 392
Target Start/End: Original strand, 17332115 - 17332339
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||  | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  |||||| ||||||| |      
T  17332115 aaagtttcatagcattttgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcatatactcgcaa 17332213  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| ||||| |||| || || |||||  |||||||| ||||||| |||||||||||| ||||| ||| ||||||| ||| ||||||||||||||    
T  17332214 gtcaaatttagttccttaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtctttaaacaagatacaaattaattata 17332313  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||| ||||| ||||||||||||||    
T  17332314 aattgcttaagaaattcataattatg 17332339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 161 - 392
Target Start/End: Complemental strand, 39435376 - 39435145
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  |||  ||||||| |||||||||||||||  |||||| |||||    
T  39435376 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacatgcaaaa-ttgaaattttgttccgcgtaagcttatac 39435278  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
     |||  ||||||||| |||||||||| || || | |||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  39435277 ccacaagtcaaatttagttccctaattttgtaggtatgactagaacatgataagaaaccttcacaatgaaattttgtaaattttaaacgagatacaaatt 39435178  T
Q  360 aattataaattgtttaagtaattcataattatg 392  Q
    |||||||||||||||||| ||||||||||||||    
T  39435177 aattataaattgtttaagaaattcataattatg 39435145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 228 - 392
Target Start/End: Complemental strand, 36291982 - 36291818
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||  ||||| |||||||||   ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||     
T  36291982 aaaattgaaattttgttccgcgtaagtgtatactcataagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaata 36291883  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaatt-gtttaagtaattcataattatg 392  Q
    || ||||  ||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  36291882 aaattttatagtttttaaacgagatacaaattaattataagttagtttaag-aattcataattatg 36291818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 228 - 367
Target Start/End: Complemental strand, 43069468 - 43069329
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| ||  |  ||||  |||||||| ||||||| ||||| ||||    
T  43069468 aaaattgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttccctaattttgcagacatgactagaacatgataagaaccttcaaaatg 43069369  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataa 367  Q
    || ||||| ||||||||||||||| |||||||||||||||    
T  43069368 aaattttgtagtttttaaacgagatacaaattaattataa 43069329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 153 - 392
Target Start/End: Complemental strand, 16155683 - 16155446
Alignment:
Q  153 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgtt-cctagta 251  Q
    ||||||| || || ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| ||||| |||| || ||  ||     
T  16155683 taaaaacgatctgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaatttttttttccgtgtg 16155585  T
Q  252 agcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgaga 351  Q
    |||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||| |  ||||  | |||||||||||||    
T  16155584 agcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaataatattttataatttttaaacgaga 16155485  T
Q  352 gacaaattaattataaattgtttaagtaattcataattatg 392  Q
      |||||||||||||||||| ||||| ||||||||||||||    
T  16155484 --caaattaattataaattggttaagaaattcataattatg 16155446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 324 - 393
Target Start/End: Original strand, 30297604 - 30297673
Alignment:
Q  324 aatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  30297604 aatgaattttttcagtttttaaacgagagacaaattaattataaattgtttaagaaattcataattatgg 30297673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 228 - 393
Target Start/End: Complemental strand, 27750846 - 27750683
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 327  Q
    ||||||| |||||| |||| ||||||| ||||||||  ||||||||||  |||||||||  | ||  |||||||||||||| |||| ||  ||||| | |    
T  27750846 aaaattgcaattttcttccgagtaagcatatactcatgggtcaaatttaattccctaattgtgtagccatggttagaacatcataaaaacattcaccaag 27750747  T
Q  328 aagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    || ||||| |||||||||||||| |||||||||| ||| ||||| ||||| |||||||||||||||    
T  27750746 aaattttgtagtttttaaacgagcgacaaattaa-tattaattg-ttaagaaattcataattatgg 27750683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 271 - 393
Target Start/End: Original strand, 11779160 - 11779282
Alignment:
Q  271 aatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaatt 370  Q
    |||||||||| | ||| ||||| ||||||||| ||||| |||| |  |||||  || || ||||| |||||||||||||| |||||||||||||| ||||    
T  11779160 aatttcgttcgccaattttataggcatggttaaaacatcataaaagccttcatcataaacttttggagtttttaaacgagcgacaaattaattatgaatt 11779259  T
Q  371 gtttaagtaattcataattatgg 393  Q
    ||||||  |||||||||||||||    
T  11779260 gtttaaaaaattcataattatgg 11779282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 164 - 362
Target Start/End: Complemental strand, 24793096 - 24792894
Alignment:
Q  164 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 263  Q
    ||||||||||| ||| |||| || |||  |||| ||||||||||||||  || ||||| |||| ||| ||| ||||||||||| ||||| |||||| ||     
T  24793096 tgcaaagttttgtaggattttaaagacatttcattttatttttatttttcaagaaaaatgtgcgaaa-ttggaattttgttccgagtaaacgtatattcg 24792998  T
Q  264 ctggtcaaatttcgttccctaatcttat-----aagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaat 358  Q
      ||||||||| || || || || ||||     | ||||||||||||||| ||||||| |||||| ||||| ||||| |||||||||||||||  |||||    
T  24792997 tgggtcaaattccgctctcttattttattttataggcatggttagaacattataagaaccttcaccatgaaattttggagtttttaaacgagatgcaaat 24792898  T
Q  359 taat 362  Q
    ||||    
T  24792897 taat 24792894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 228 - 377
Target Start/End: Original strand, 18266162 - 18266315
Alignment:
Q  228 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggt----tagaacataataagaatcttcac 323  Q
    ||||||| ||||||| ||  ||||||| |||| |||| |||||||||||  |||| ||| || || |||||||    ||||| || ||||||| ||||||    
T  18266162 aaaattgcaattttgctctgagtaagcatatagtcacaggtcaaatttcactcccaaattttgtaggcatggtcgattagaatatcataagaaccttcac 18266261  T
Q  324 aatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaag 377  Q
     ||| | ||||| |||||||||| |||||||||| ||||||| |||||||||||    
T  18266262 catggaattttgaagtttttaaatgagagacaaactaattatgaattgtttaag 18266315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 249 - 328
Target Start/End: Complemental strand, 28801791 - 28801712
Alignment:
Q  249 gtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 328  Q
    ||||||||||||||||  ||||||||| |||||||||| || ||||||||  |||||||| ||||||| |||||||||||    
T  28801791 gtaagcgtatactcacaagtcaaatttagttccctaattttgtaagcatgactagaacatgataagaaccttcacaatga 28801712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 393
Target Start/End: Complemental strand, 8788452 - 8788264
Alignment:
Q  204 tttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttag 303  Q
    |||||||| |||| |||| |||||||| | | ||||||||| | ||||||||||| ||||   |||||||| | ||| | ||| || || ||||||||||    
T  8788452 tttatttttaaaccaaaatgtgcaaaa-tggcaattttgtttcgagtaagcgtattctcataagtcaaattccattctccaattttgtaggcatggttag 8788354  T
Q  304 aacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    ||||| ||||||| |||||| || || ||||  |||| |||||| ||| ||  |||||||   |||| |||||| |||||||||||||||    
T  8788353 aacatcataagaaacttcaccattaaattttcgagttcttaaacaagatacggattaattcctaattatttaagaaattcataattatgg 8788264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 294 - 383
Target Start/End: Complemental strand, 23034351 - 23034262
Alignment:
Q  294 gcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattc 383  Q
    ||||||||  || |||||||||| ||||| ||| || ||||  ||||||||||  ||||||||||||||||||||||||||||| |||||    
T  23034351 gcatggttgtaatataataagaaccttcaaaattaaattttatagtttttaaataagagacaaattaattataaattgtttaagaaattc 23034262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 296 - 393
Target Start/End: Original strand, 35911354 - 35911451
Alignment:
Q  296 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    ||||||||||||| |||| || |||||| ||||| ||||  | |||| ||||||||||  |||||| ||| ||||||||||| |||||||||||||||    
T  35911354 atggttagaacatcataaaaaccttcaccatgaaattttatatttttcaaacgagagatgaattaactatgaattgtttaagaaattcataattatgg 35911451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 298 - 398
Target Start/End: Complemental strand, 35338408 - 35338308
Alignment:
Q  298 ggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatggaaaa 397  Q
    ||||||||||| |||||||  ||||| || || |||||  ||||||||| |||| || |||||||||| |||| |||||  |||||||||||||||||||    
T  35338408 ggttagaacatcataagaacgttcaccataaaattttggggtttttaaatgagatacgaattaattatgaattttttaaaaaattcataattatggaaaa 35338309  T
Q  398 t 398  Q
    |    
T  35338308 t 35338308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 310 - 393
Target Start/End: Complemental strand, 20368573 - 20368490
Alignment:
Q  310 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    ||||||| |||||||||||| ||||| ||||||||||||| | ||||||| ||||| |||| |  ||| |||||||||||||||    
T  20368573 ataagaaccttcacaatgaaattttggagtttttaaacgataaacaaatttattatgaattatccaagaaattcataattatgg 20368490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 311
Target Start/End: Original strand, 30297492 - 30297606
Alignment:
Q  193 ttcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttata 292  Q
    |||||||||||||| ||||  ||| |||| |||||||| ||||||||||||| ||| ||||||   ||||||  |||||||||  ||||||||| || ||    
T  30297492 ttcaatttatttttgttttccaactaaaacgtgcaaaa-ttgaaattttgtttctattaagcg---actcacatgtcaaattttattccctaattttgta 30297587  T
Q  293 agcatggttagaacataat 311  Q
     ||||||| ||||||||||    
T  30297588 ggcatggtcagaacataat 30297606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 389
Target Start/End: Complemental strand, 33094407 - 33094355
Alignment:
Q  337 agtttttaaacgagagacaaattaattataaattgtttaagtaattcataatt 389  Q
    ||||||||||||||||| ||||||||||| ||||||||||  |||||||||||    
T  33094407 agtttttaaacgagagaaaaattaattatgaattgtttaataaattcataatt 33094355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 35362206 - 35362274
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaacaatt 163  Q
    ||||||||||||| |||||||||||| ||||||| ||||| | || ||||||||||||| |||| ||||    
T  35362206 ataaaggacgaaagcgttacctaaaattaagttaagggactaattgtgtaattttgccttaaaagaatt 35362274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 310 - 393
Target Start/End: Complemental strand, 20363211 - 20363128
Alignment:
Q  310 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattatgg 393  Q
    |||||||  ||||||||||| ||||| ||||||||||||| | ||||||| ||||| |||| |  ||| |||||||||||||||    
T  20363211 ataagaacattcacaatgaaattttggagtttttaaacgataaacaaatttattatgaattatccaagaaattcataattatgg 20363128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 229 - 391
Target Start/End: Original strand, 30922486 - 30922648
Alignment:
Q  229 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 328  Q
    |||||| ||||||||||  | ||||||||||||||| ||||| ||| | ||   |||| || |||||||||||  ||||| |||| || |||||| || |    
T  30922486 aaattgcaattttgttctgactaagcgtatactcacgggtcatattccattttttaattttgtaagcatggtttaaacattataaaaaccttcaccatca 30922585  T
Q  329 agttttgcagtttttaaacgagagacaaattaattataaattgtttaagtaattcataattat 391  Q
    | ||||  | ||||||||||||| |   ||||| ||| ||||||||||  |||||||||||||    
T  30922586 aattttagaatttttaaacgagatatgcattaactatgaattgtttaaaaaattcataattat 30922648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 27843080 - 27843023
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 152  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | || ||||||||||||    
T  27843080 ataaaggacgaaaatgttacctaaaattaagttaagggactaattatgtaattttgcc 27843023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 266 - 387
Target Start/End: Complemental strand, 1050650 - 1050533
Alignment:
Q  266 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 365  Q
    ||||||||||||||||||||| || |||| || ||||||||   |||||||  ||||| || || ||||  ||||||||||||||    | ||||||| |    
T  1050650 ggtcaaatttcgttccctaattttgtaagaatagttagaactacataagaacattcaccataaaattttagagtttttaaacgag----acattaatttt 1050555  T
Q  366 aaattgtttaagtaattcataa 387  Q
     ||||||||||| |||||||||    
T  1050554 gaattgtttaagaaattcataa 1050533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 15179078 - 15179137
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 154  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||||    
T  15179078 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccta 15179137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 338 - 389
Target Start/End: Complemental strand, 22761228 - 22761177
Alignment:
Q  338 gtttttaaacgagagacaaattaattataaattgtttaagtaattcataatt 389  Q
    |||||| || |||||||||||||||| | ||||||||||| |||||||||||    
T  22761228 gtttttgaaagagagacaaattaattctgaattgtttaagaaattcataatt 22761177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 32994443 - 32994502
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 154  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||||    
T  32994443 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccta 32994502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 32458075 - 32458133
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 153  Q
    |||||||| ||||| ||||||||||| ||||||| ||||| | || |||||||||||||    
T  32458075 ataaaggatgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcct 32458133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 35363278 - 35363340
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 157  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  35363278 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 35363340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 19558161 - 19558218
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 152  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||    
T  19558161 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 19558218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 90; Significance: 5e-43; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 167 - 392
Target Start/End: Complemental strand, 53578 - 53354
Alignment:
Q  167 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 266  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||      
T  53578 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaa 53480  T
Q  267 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 366  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  53479 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 53380  T
Q  367 aattgtttaagtaattcataattatg 392  Q
    ||||||||||| ||||||||||||||    
T  53379 aattgtttaagaaattcataattatg 53354  T

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Target: scaffold0002 (Bit Score: 89; Significance: 2e-42; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 161 - 392
Target Start/End: Original strand, 479944 - 480175
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  479944 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 480042  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  480043 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 480142  T
Q  360 aattataaattgtttaagtaattcataattatg 392  Q
    |||||||||||||||||| ||||||||||||||    
T  480143 aattataaattgtttaagaaattcataattatg 480175  T

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Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 330254 - 330194
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 155  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || |||||||||||||||    
T  330254 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcctaa 330194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 84; Significance: 2e-39; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 166 - 393
Target Start/End: Complemental strand, 17978 - 17754
Alignment:
Q  166 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 265  Q
    |||||||| ||| |||||| | |||| | |||||| ||||||||||  ||| ||| | ||||||| |||||||||||||||||||||  ||||||| |      
T  17978 caaagtttcatatcatttcgaagacgttgcaatttgtttttatttttcaaccaaacg-tgcaaaa-ttgaaattttgttcctagtaattgtatactaata 17881  T
Q  266 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 365  Q
    | |||||| ||||||| |||| || || ||||||||||||||||||| ||| |||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  17880 gatcaaatgtcgttccttaattttgtaggcatggttagaacataatatgaaccttcacaatgaaattttgctgtttttaaa-gagagacaaattacttat 17782  T
Q  366 aaattgtttaagtaattcataattatgg 393  Q
    |||||||| ||| |||||||| ||||||    
T  17781 aaattgttaaagaaattcatacttatgg 17754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 84; Significance: 2e-39; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 161 - 387
Target Start/End: Complemental strand, 18238 - 18012
Alignment:
Q  161 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 260  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  18238 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 18140  T
Q  261 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataag-aatcttcacaatgaagttttgcagtttttaaacgagagacaaatt 359  Q
    ||||  ||||||||| |||||||||| || ||||||||  |||||||| ||||| || |||||||||||| ||||| |  |||||||||| | |||||||    
T  18139 tcacaagtcaaatttagttccctaattttgtaagcatgactagaacatgataagaaaccttcacaatgaaattttgtaaattttaaacgatatacaaatt 18040  T
Q  360 aattataaattgtttaagtaattcataa 387  Q
    ||||||||||||||||||  ||||||||    
T  18039 aattataaattgtttaagacattcataa 18012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 164 - 393
Target Start/End: Complemental strand, 8695 - 8467
Alignment:
Q  164 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 263  Q
    |||||| ||| |||| ||||||| || | ||| |||| ||||||||||  ||| |||| |||  ||| ||| ||||||||||  ||||| | |||| |||    
T  8695 tgcaaaatttcatagtatttcaaagatgtttcgatttctttttatttttcaaccaaaacgtgtgaaa-ttgcaattttgttctgagtaaacatatattca 8597  T
Q  264 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 363  Q
    |  |||||||||||||  ||||| || || ||||||||||||||  ||||||| |||||| ||||| ||||| || ||||||| |||| || ||||||||    
T  8596 cgagtcaaatttcgttttctaattttctaggcatggttagaacaacataagaaccttcaccatgaaattttgaagattttaaatgagatacgaattaatt 8497  T
Q  364 ataaattgtttaagtaattcataattatgg 393  Q
    || ||||||||||| |||||||||||||||    
T  8496 attaattgtttaagaaattcataattatgg 8467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 164 - 362
Target Start/End: Complemental strand, 35479 - 35277
Alignment:
Q  164 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 263  Q
    ||||||||||| ||| |||| || |||  |||| ||||||||||||||  || ||||| |||| ||| ||| ||||||||||| ||||| |||||| ||     
T  35479 tgcaaagttttgtaggattttaaagacatttcattttatttttatttttcaagaaaaatgtgcgaaa-ttggaattttgttccgagtaaacgtatattcg 35381  T
Q  264 ctggtcaaatttcgttccctaatcttat-----aagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaat 358  Q
      ||||||||| || || || || ||||     | ||||||||||||||| ||||||| |||||| ||||| ||||| |||||||||||||||  |||||    
T  35380 tgggtcaaattccgctctcttattttattttataggcatggttagaacattataagaaccttcaccatgaaattttggagtttttaaacgagatgcaaat 35281  T
Q  359 taat 362  Q
    ||||    
T  35280 taat 35277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0831 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 3521 - 3383
Alignment:
Q  194 tcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataa 293  Q
    ||||||| ||||||||||  |||||||| |||||||| ||| ||||||||||| | ||| | ||||||||| | |||||| | |||||| ||| || ||     
T  3521 tcaatttgtttttatttttcaacaaaaatgtgcaaaa-ttgcaattttgttccgactaaccatatactcacggatcaaatgttgttccccaattttgtag 3423  T
Q  294 gcatggttagaacataataagaatcttcacaatgaagtttt 334  Q
    |||||||||||| ||  ||||||| ||||| ||||| ||||    
T  3422 gcatggttagaatat-gtaagaattttcaccatgaattttt 3383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 12885 - 12945
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 155  Q
    |||||||||||||| |||| |||||| ||||||| ||||| | || |||||||||||||||    
T  12885 ataaaggacgaaaatgttatctaaaattaagttaagggactaattgtgtaattttgcctaa 12945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 136973 - 136913
Alignment:
Q  95 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 155  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || |||||||||||||||    
T  136973 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcctaa 136913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 30; Significance: 0.0000003; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 12001 - 11940
Alignment:
Q  91 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 152  Q
    ||||| |||| ||||||| ||||||||||| ||||||| ||||| | || ||||||||||||    
T  12001 aaaaaaaaagaacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcc 11940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 12223 - 12280
Alignment:
Q  96 taaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 153  Q
    ||||||||||||  ||||||||||| ||||||| ||||| | || |||||||||||||    
T  12223 taaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 12280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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