View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14258_low_10 (Length: 537)

Name: NF14258_low_10
Description: NF14258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14258_low_10
NF14258_low_10
[»] chr5 (32 HSPs)
chr5 (132-439)||(8806122-8806430)
chr5 (130-425)||(3654678-3654974)
chr5 (154-449)||(38915540-38915836)
chr5 (154-449)||(29789527-29789824)
chr5 (215-449)||(13826101-13826342)
chr5 (156-449)||(5121015-5121312)
chr5 (154-453)||(13820691-13820995)
chr5 (197-446)||(43171272-43171518)
chr5 (340-449)||(5578620-5578730)
chr5 (259-418)||(37134741-37134902)
chr5 (274-449)||(6769310-6769482)
chr5 (340-446)||(42879580-42879687)
chr5 (303-449)||(29149635-29149782)
chr5 (340-446)||(9409564-9409671)
chr5 (194-449)||(16040055-16040308)
chr5 (314-449)||(38491019-38491156)
chr5 (343-445)||(13382615-13382718)
chr5 (154-229)||(23318485-23318560)
chr5 (313-449)||(7850287-7850425)
chr5 (375-448)||(20892315-20892388)
chr5 (158-298)||(23151541-23151681)
chr5 (340-449)||(13490372-13490482)
chr5 (375-445)||(18889054-18889124)
chr5 (343-449)||(23962832-23962939)
chr5 (375-449)||(2676947-2677021)
chr5 (253-350)||(20891318-20891416)
chr5 (259-332)||(23319701-23319775)
chr5 (174-271)||(29150502-29150599)
chr5 (57-106)||(8806027-8806076)
chr5 (375-442)||(16686726-16686794)
chr5 (308-408)||(14651716-14651818)
chr5 (400-449)||(40583628-40583677)
[»] chr3 (29 HSPs)
chr3 (157-446)||(30190997-30191288)
chr3 (182-449)||(29713788-29714053)
chr3 (165-449)||(10992911-10993194)
chr3 (193-446)||(47184950-47185205)
chr3 (193-449)||(1424679-1424933)
chr3 (154-430)||(12893051-12893330)
chr3 (172-450)||(44663183-44663447)
chr3 (264-449)||(1698401-1698588)
chr3 (155-267)||(11830316-11830428)
chr3 (343-449)||(10994164-10994271)
chr3 (253-430)||(11639916-11640095)
chr3 (274-425)||(16876821-16876971)
chr3 (353-441)||(17147208-17147296)
chr3 (343-449)||(19157075-19157182)
chr3 (313-446)||(23044880-23045015)
chr3 (343-449)||(27941531-27941638)
chr3 (313-449)||(31884940-31885078)
chr3 (291-423)||(53472130-53472263)
chr3 (343-446)||(25071628-25071732)
chr3 (275-449)||(40145448-40145621)
chr3 (343-445)||(53076983-53077086)
chr3 (194-430)||(3917989-3918234)
chr3 (292-408)||(4127547-4127664)
chr3 (341-449)||(15760841-15760950)
chr3 (375-449)||(52448125-52448199)
chr3 (303-425)||(6024740-6024863)
chr3 (390-449)||(24927913-24927972)
chr3 (36-83)||(47185419-47185468)
chr3 (183-224)||(46947640-46947681)
[»] chr8 (27 HSPs)
chr8 (167-449)||(11648592-11648875)
chr8 (254-446)||(9382150-9382344)
chr8 (167-425)||(24190187-24190443)
chr8 (183-449)||(9137516-9137780)
chr8 (253-425)||(28374489-28374661)
chr8 (283-425)||(23232178-23232322)
chr8 (281-443)||(32073246-32073413)
chr8 (343-449)||(1981578-1981685)
chr8 (343-449)||(45117448-45117555)
chr8 (342-449)||(4432086-4432194)
chr8 (343-449)||(3762679-3762786)
chr8 (343-445)||(31597508-31597611)
chr8 (340-449)||(7972993-7973103)
chr8 (314-449)||(28509233-28509370)
chr8 (339-442)||(16729719-16729823)
chr8 (141-237)||(23232079-23232175)
chr8 (340-449)||(39906229-39906339)
chr8 (340-449)||(40971424-40971534)
chr8 (343-449)||(6927561-6927668)
chr8 (375-449)||(7263680-7263754)
chr8 (308-425)||(2879196-2879315)
chr8 (343-449)||(24682597-24682704)
chr8 (341-449)||(2807702-2807811)
chr8 (155-243)||(24682815-24682904)
chr8 (154-234)||(961163-961243)
chr8 (308-374)||(11994691-11994758)
chr8 (39-84)||(11648101-11648148)
[»] chr2 (38 HSPs)
chr2 (154-449)||(19091009-19091305)
chr2 (154-442)||(13597700-13597989)
chr2 (253-449)||(30386836-30387033)
chr2 (132-328)||(31548966-31549162)
chr2 (196-446)||(14904009-14904261)
chr2 (193-449)||(25621421-25621678)
chr2 (253-449)||(38566131-38566321)
chr2 (154-449)||(6882980-6883278)
chr2 (253-449)||(10022892-10023090)
chr2 (173-449)||(11199129-11199407)
chr2 (270-449)||(9057382-9057561)
chr2 (343-449)||(33054755-33054862)
chr2 (314-449)||(7880344-7880481)
chr2 (183-449)||(38422792-38423058)
chr2 (183-449)||(41302303-41302569)
chr2 (172-449)||(24484458-24484734)
chr2 (375-449)||(41422923-41422997)
chr2 (340-449)||(41825976-41826086)
chr2 (313-446)||(29303152-29303287)
chr2 (340-449)||(2554038-2554148)
chr2 (313-449)||(19678001-19678139)
chr2 (340-449)||(22575996-22576106)
chr2 (340-449)||(27861833-27861943)
chr2 (343-449)||(44314058-44314165)
chr2 (343-449)||(44322237-44322344)
chr2 (343-449)||(45277506-45277613)
chr2 (375-445)||(19685779-19685849)
chr2 (157-242)||(43673105-43673191)
chr2 (308-449)||(2565594-2565737)
chr2 (308-425)||(18781161-18781280)
chr2 (343-449)||(33015208-33015315)
chr2 (375-449)||(6221368-6221442)
chr2 (284-399)||(41422808-41422921)
chr2 (402-449)||(31549160-31549207)
chr2 (308-408)||(90308-90410)
chr2 (315-383)||(25416047-25416117)
chr2 (39-106)||(31548851-31548920)
chr2 (404-449)||(25416114-25416159)
[»] chr4 (32 HSPs)
chr4 (161-444)||(41509027-41509310)
chr4 (253-449)||(10142125-10142323)
chr4 (155-430)||(10373196-10373474)
chr4 (167-449)||(1843000-1843280)
chr4 (173-449)||(52458998-52459276)
chr4 (173-449)||(52460255-52460533)
chr4 (167-445)||(9921694-9921969)
chr4 (253-449)||(21319994-21320192)
chr4 (270-449)||(29282952-29283132)
chr4 (292-440)||(42512194-42512344)
chr4 (308-449)||(13957232-13957375)
chr4 (194-406)||(24611216-24611430)
chr4 (343-449)||(10095037-10095144)
chr4 (340-449)||(39480263-39480373)
chr4 (340-449)||(6261593-6261703)
chr4 (375-449)||(7413791-7413865)
chr4 (375-449)||(7459872-7459946)
chr4 (317-449)||(3665451-3665584)
chr4 (313-449)||(28143439-28143577)
chr4 (313-425)||(51337648-51337762)
chr4 (340-446)||(36213718-36213824)
chr4 (337-424)||(9900071-9900159)
chr4 (378-446)||(23935828-23935896)
chr4 (260-402)||(25201039-25201183)
chr4 (308-449)||(14192302-14192445)
chr4 (154-229)||(25201197-25201272)
chr4 (215-297)||(3665324-3665406)
chr4 (167-245)||(9896383-9896460)
chr4 (183-236)||(6830670-6830723)
chr4 (394-449)||(24612043-24612098)
chr4 (303-403)||(51890406-51890508)
chr4 (303-403)||(51890680-51890782)
[»] chr1 (26 HSPs)
chr1 (183-445)||(24185519-24185782)
chr1 (154-425)||(5509680-5509953)
chr1 (253-419)||(47559476-47559642)
chr1 (194-449)||(5209545-5209802)
chr1 (193-449)||(12027769-12028027)
chr1 (253-449)||(47397450-47397649)
chr1 (342-449)||(49229351-49229459)
chr1 (337-449)||(36296675-36296788)
chr1 (342-449)||(25095147-25095255)
chr1 (281-442)||(9023202-9023365)
chr1 (340-449)||(23664120-23664230)
chr1 (337-449)||(42722210-42722323)
chr1 (343-449)||(17967339-17967446)
chr1 (343-449)||(48596367-48596474)
chr1 (313-449)||(28945803-28945941)
chr1 (343-445)||(5049441-5049544)
chr1 (343-445)||(21906365-21906468)
chr1 (343-449)||(22070485-22070592)
chr1 (343-445)||(34307461-34307564)
chr1 (375-445)||(48999389-48999459)
chr1 (354-442)||(48646143-48646232)
chr1 (343-445)||(27430805-27430908)
chr1 (354-448)||(12783996-12784090)
chr1 (375-449)||(44310437-44310511)
chr1 (341-449)||(26221657-26221766)
chr1 (173-273)||(44310547-44310647)
[»] chr7 (34 HSPs)
chr7 (184-445)||(40934035-40934297)
chr7 (154-449)||(21863581-21863877)
chr7 (285-446)||(39038847-39039010)
chr7 (161-425)||(9420461-9420727)
chr7 (253-423)||(28460165-28460338)
chr7 (158-449)||(5770859-5771141)
chr7 (282-449)||(43179378-43179546)
chr7 (154-425)||(45445899-45446165)
chr7 (284-448)||(8604552-8604718)
chr7 (342-449)||(24441941-24442049)
chr7 (337-449)||(48636675-48636788)
chr7 (341-443)||(29636904-29637007)
chr7 (274-430)||(35118193-35118348)
chr7 (341-446)||(41822148-41822254)
chr7 (193-438)||(8113779-8114024)
chr7 (313-449)||(6189387-6189525)
chr7 (339-442)||(20394796-20394900)
chr7 (313-422)||(8069580-8069691)
chr7 (343-449)||(8389314-8389421)
chr7 (343-445)||(31072539-31072642)
chr7 (375-449)||(4539848-4539922)
chr7 (303-448)||(44733619-44733764)
chr7 (313-449)||(48238433-48238570)
chr7 (375-449)||(13754097-13754171)
chr7 (375-449)||(18667350-18667424)
chr7 (375-449)||(35478025-35478099)
chr7 (375-443)||(23381092-23381160)
chr7 (340-446)||(135639-135746)
chr7 (284-424)||(3124209-3124354)
chr7 (155-234)||(39038750-39038829)
chr7 (375-424)||(1623572-1623621)
chr7 (308-408)||(19311919-19312021)
chr7 (384-420)||(15991930-15991966)
chr7 (385-449)||(36628441-36628505)
[»] scaffold0263 (1 HSPs)
scaffold0263 (154-449)||(18424-18721)
[»] chr6 (24 HSPs)
chr6 (193-446)||(11680721-11680976)
chr6 (253-449)||(19107918-19108112)
chr6 (215-422)||(3229087-3229292)
chr6 (253-449)||(31129727-31129920)
chr6 (343-449)||(1422937-1423044)
chr6 (215-449)||(26817340-26817575)
chr6 (314-449)||(33516611-33516748)
chr6 (340-449)||(18675335-18675445)
chr6 (338-440)||(1131765-1131868)
chr6 (158-330)||(22524816-22524988)
chr6 (343-449)||(15060148-15060255)
chr6 (343-449)||(22012131-22012238)
chr6 (343-449)||(34043526-34043633)
chr6 (375-449)||(20990419-20990493)
chr6 (375-449)||(1603352-1603426)
chr6 (342-451)||(4065601-4065711)
chr6 (343-407)||(21442661-21442726)
chr6 (375-430)||(26212911-26212966)
chr6 (57-95)||(15603786-15603824)
chr6 (20-82)||(1831209-1831273)
chr6 (344-451)||(4090808-4090916)
chr6 (343-449)||(12269381-12269487)
chr6 (375-408)||(22524749-22524782)
chr6 (56-84)||(11680480-11680508)
[»] scaffold1266 (1 HSPs)
scaffold1266 (154-449)||(1295-1592)
[»] scaffold0160 (1 HSPs)
scaffold0160 (215-449)||(25100-25336)
[»] scaffold0178 (1 HSPs)
scaffold0178 (287-449)||(2387-2551)
[»] scaffold0116 (1 HSPs)
scaffold0116 (169-449)||(40798-41076)
[»] scaffold0002 (2 HSPs)
scaffold0002 (154-402)||(98176-98425)
scaffold0002 (400-451)||(119420-119471)
[»] scaffold1364 (1 HSPs)
scaffold1364 (154-402)||(873-1127)
[»] scaffold0743 (1 HSPs)
scaffold0743 (313-449)||(3287-3425)
[»] scaffold0016 (4 HSPs)
scaffold0016 (340-449)||(87645-87755)
scaffold0016 (343-449)||(88122-88229)
scaffold0016 (343-449)||(88598-88705)
scaffold0016 (343-449)||(89074-89181)
[»] scaffold0093 (1 HSPs)
scaffold0093 (375-445)||(50914-50984)
[»] scaffold0137 (1 HSPs)
scaffold0137 (194-297)||(21299-21402)
[»] scaffold0552 (1 HSPs)
scaffold0552 (183-236)||(10171-10224)


Alignment Details
Target: chr5 (Bit Score: 165; Significance: 5e-88; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 132 - 439
Target Start/End: Original strand, 8806122 - 8806430
Alignment:
Q  132 ttagcacccgagaacaatagacccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaattta 231  Q
    ||||| || |||||||||||  |||| ||||||||||||||||||| || | ||||||||||||||||||||||||||| |||||| ||||||||||| |    
T  8806122 ttagcgcctgagaacaataggtccacgtgatcctaaatgcgtctcacatcgatttcatgatcatgaatgcgtctcacatgattttgtattatcaaattca 8806221  T
Q  232 attttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttc 331  Q
    |||||| ||||||| ||||  ||||| ||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  8806222 attttgcaatccttttaatcaattcaagaaagttgacattactataatgatataatttaaatttttgaaacctttgaaagacaagattaaaattaatttc 8806321  T
Q  332 tcta-aaggcccattttcaagtaaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtga 430  Q
    | ||  |  | ||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |  ||||||||||||||| ||||    
T  8806322 tttactatactcattttcaactaaaatataatttgttttgttataaaattatcccaatttcttggataataaatatgacaaatatttttaatattagtga 8806421  T
Q  431 atcacatta 439  Q
      |||||||    
T  8806422 ggcacatta 8806430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 130 - 425
Target Start/End: Complemental strand, 3654974 - 3654678
Alignment:
Q  130 tattagcacccgagaacaatagacccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatt 229  Q
    |||| ||||| |||||||| ||   |||||||| ||||||| |||||| ||  ||||||||||||| |||||||||  ||| |||||||||| |||||||    
T  3654974 tattggcacctgagaacaacagggtcacatgattctaaatgtgtctcatatcagtttcatgatcataaatgcgtcttgcatgattttgcattctcaaatt 3654875  T
Q  230 taattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatt 329  Q
    |||||||| ||||  | ||||  ||||| ||||||||||||||| || || |||||||||||||||||  ||||||| ||||||||||||||||||| ||    
T  3654874 taattttgcaatctctttaatcaattcaagaaagttgacattactatgatgatataatttaatttttttgaacctttgaaagacaagattaaaattagtt 3654775  T
Q  330 tctcta-aaggcccattttcaagtaaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatatt 425  Q
    ||||||  ||| |||||||||| ||||||||||||  ||| || |||||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  3654774 tctctagtaggtccattttcaactaaaatataatttattttgtaataaaattatcttaatttcttggataataaatatcatcaatatttttaatatt 3654678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 154 - 449
Target Start/End: Original strand, 38915540 - 38915836
Alignment:
Q  154 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 253  Q
    ||||||||||||||||||||| || ||  |||| |||||||||||||||| || ||| |||| ||||||||||||| ||||||| ||||||| | ||  |    
T  38915540 ccacatgatcctaaatgcgtcccacatcagtttaatgatcatgaatgcgtatcgcatgatttagcattatcaaattcaattttgcaatcctttttatcaa 38915639  T
Q  254 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagt 352  Q
    |||  ||||||||||||||| ||||  |||||||||||||||||| ||||||| |||||||| ||||| | |||||||||||  ||||| |||||||| |    
T  38915640 ttctagaaagttgacattactataacgatataatttaattttttggaacctttgaaagacaacattaagactaatttctctagtaggcctattttcaact 38915739  T
Q  353 aaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||  |  ||| ||||||||||||||||||||||||||||||||||||| |  ||||| ||||||||| ||||  |||||||||||||||||    
T  38915740 aaaatatatatttttttgttataaaattatcccaatttcttggataataaatatgactaatatatttaatattagtgaggcacattattaggaacaa 38915836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 154 - 449
Target Start/End: Complemental strand, 29789824 - 29789527
Alignment:
Q  154 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 253  Q
    ||||||||||| |||||||||||| || ||| ||||||||||||||| ||||| ||| || || |||||||| ||| |||| || || |||  ||||  |    
T  29789824 ccacatgatcccaaatgcgtctcacatcggtctcatgatcatgaatgtgtctcgcatgatcttacattatcatattcaattgtgcaaccctcttaatcaa 29789725  T
Q  254 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagt 352  Q
    |||| |||||||||| |||| ||| | |||||||||| |||||||||| |||| ||| |||||||||| |||||||||||||  || ||||||||||| |    
T  29789724 ttcatgaaagttgacgttactatattgatataatttatttttttgaaatctttgaaaaacaagattaagattaatttctctagtagacccattttcaact 29789625  T
Q  353 aaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||||| |||| |||| ||||| |||||||| ||||||||||||||||||||||||| | |||||||| ||||  ||||  |||||| ||||||||||    
T  29789624 aaaatagaatttgttttgttatgaaaattattccaatttcttggataataaatatcaccgatattttttatatcagtgaggcacatttttaggaacaa 29789527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 215 - 449
Target Start/End: Original strand, 13826101 - 13826342
Alignment:
Q  215 ttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataattta---attttttgaaacctttaaaag 311  Q
    ||||||||||||||| |||| || |||||||   ||  ||||| ||||||||||||||| ||| | ||||||||||   |||||||| ||  ||| | ||    
T  13826101 ttgcattatcaaattcaattatgaaatcctttcgatcaattcaagaaagttgacattactatattgatataatttatttattttttggaatttttgagag 13826200  T
Q  312 acaagattaaaattaatttctcta--aaggcc-cattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatc 407  Q
    |||||||||| |||||||| ||||  ||| ||  |||||||| ||||||| |||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  13826201 acaagattaagattaatttatctagtaagcccatattttcaactaaaatagaatttgttttgttatgaaaattatcccaatttcttggataataaatatc 13826300  T
Q  408 agcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    | | |||||||||||||| ||||  |||||||||||||||||    
T  13826301 atcgatatttttaatattagtgagacacattattaggaacaa 13826342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 156 - 449
Target Start/End: Original strand, 5121015 - 5121312
Alignment:
Q  156 acatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataat-tttgcattatcaaatttaattttgtaatccttataatttat 254  Q
    |||||||||||||||||||||| ||    |||| |||||| |||| ||||  ||| || |||||||||||||||| |||| || |||||||  ||   ||    
T  5121015 acatgatcctaaatgcgtctcacatctagttcaggatcat-aatgtgtcttgcatgatctttgcattatcaaattcaattatgcaatcctttcaaacaat 5121113  T
Q  255 tcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaatta--atttctctaa-aggcccattttcaag 351  Q
    ||| |||||||||||| || ||| | |||||||||| ||||||  ||||||| |||||||||||||| ||||  |||||||||  ||||  ||||||||     
T  5121114 tcaagaaagttgacatcactatattgatataatttatttttttagaacctttgaaagacaagattaagattataatttctctagtaggctaattttcaat 5121213  T
Q  352 taaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||| |||| ||||  |||| ||||||||  |||||| ||||||||||||||||| ||||||||||||||||  |||  |||||||||||||||||    
T  5121214 taaaataaaatttgttttattatgaaaattatttcaattttttggataataaatatcaccaatatttttaatattattgagccacattattaggaacaa 5121312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 154 - 453
Target Start/End: Original strand, 13820691 - 13820995
Alignment:
Q  154 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 253  Q
    |||| |||||| ||||||| |||| || |||||||||| | |||||||||||  ||| || ||||| ||||||||| |||| || ||||||| ||||  |    
T  13820691 ccacgtgatcccaaatgcgcctcacatcggtttcatgaacgtgaatgcgtcttgcatgatgttgcactatcaaattcaattatgcaatccttttaatcaa 13820790  T
Q  254 ttcacgaaagttgacattaccataattatataatttaa---ttttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttca 349  Q
    || | ||||||||||||||| ||| | |||||||||     ||||||  |  |||| |||||||||||| | |||||||| | ||  || ||||||||||    
T  13820791 tttaagaaagttgacattactatattgatataatttgtattttttttttattctttgaaagacaagatttagattaatttatttagtagacccattttca 13820890  T
Q  350 agtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaaca 448  Q
    | ||||||| | || |||| ||||| |||||||||| ||||||||| ||||||||||| | ||||||||||||| || ||||  |||||||||||||||     
T  13820891 actaaaatagattttgttttgttatgaaaattatccaaatttcttgaataataaatatgaccaatatttttaatgttagtgagacacattattaggaact 13820990  T
Q  449 aggac 453  Q
    |||||    
T  13820991 aggac 13820995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 197 - 446
Target Start/End: Original strand, 43171272 - 43171518
Alignment:
Q  197 aatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaattttt 296  Q
    |||| ||||| ||| || |||||||||||||||||| | || |||| ||   ||  ||| | ||||||||||||||| ||| | || ||||||| |||||    
T  43171272 aatgtgtctcgcatgatcttgcattatcaaatttaactatgcaatcatttcgatcaattaaagaaagttgacattactatattgatgtaatttatttttt 43171371  T
Q  297 tgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataaaattatcccaatttcttgg 395  Q
    || ||||||| ||| | || ||||| |||||||||||||  ||| |||||||||| |||||||| ||| |||  |    ||||||||| |||| | ||||    
T  43171372 tggaacctttgaaaaaaaaaattaagattaatttctctagtaggtccattttcaactaaaatatcatttgttatg----aaaattatctcaatatattgg 43171467  T
Q  396 ataataaatatcagcaatatttttaatattcgtgaatcacattattaggaa 446  Q
    ||||||||||||| |||||||||||||||| ||||| ||||||||||||||    
T  43171468 ataataaatatcaccaatatttttaatattagtgaagcacattattaggaa 43171518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 340 - 449
Target Start/End: Original strand, 5578620 - 5578730
Alignment:
Q  340 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatt 438  Q
    ||||||||||| ||||||| |||| | || ||||| |||||||||||||||||||||||||||||||||  | |||||||||||||| ||||| ||||||    
T  5578620 cccattttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacatt 5578719  T
Q  439 attaggaacaa 449  Q
    |||||||||||    
T  5578720 attaggaacaa 5578730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 259 - 418
Target Start/End: Complemental strand, 37134902 - 37134741
Alignment:
Q  259 gaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaat 357  Q
    |||| |||||||||| ||| | |||||||||| ||||| ||||||||| ||||||||||| ||||||||| | ||||  |||   |||||||| ||||||    
T  37134902 gaaaattgacattactatattgatataatttattttttcgaaacctttgaaagacaagatcaaaattaatatttctagtaggtgtattttcaactaaaat 37134803  T
Q  358 ataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttt 418  Q
    |||||| |||| ||||| |||||||| |||||||||| |||||||||||||| |||| ||||    
T  37134802 ataatttgttttgttatgaaaattattccaatttcttagataataaatatcaccaatttttt 37134741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 274 - 449
Target Start/End: Original strand, 6769310 - 6769482
Alignment:
Q  274 cataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagtttggtta 373  Q
    |||||| |||||||||||||||||| ||  ||| |||||||| ||||||||||||||||   | |||  ||||| || |||||||||||| |||| ||||    
T  6769310 cataatgatataatttaattttttggaaaatttcaaagacaacattaaaattaatttctagta-ggcttatttttaactaaaatataatttgttttgtta 6769408  T
Q  374 taaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||| ||  ||||||||||||||||||||| | |||||| |||||||||  |||  ||||||||||| |||||    
T  6769409 taaaattctc--aatttcttggataataaatatgatcaatatatttaatattattgaggcacattattagaaacaa 6769482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 340 - 446
Target Start/End: Complemental strand, 42879687 - 42879580
Alignment:
Q  340 cccattttcaagtaaaatataattagtttggttataaaa-ttatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatt 438  Q
    ||||||||||| ||||||| |||| | || ||||||||| ||||||||||||||||||||| |||||||  |||||||||||||||| ||||| ||||||    
T  42879687 cccattttcaactaaaatagaatttgctttgttataaaaattatcccaatttcttggataaaaaatatcgtcaatatttttaatattagtgaaacacatt 42879588  T
Q  439 attaggaa 446  Q
    ||||||||    
T  42879587 attaggaa 42879580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 303 - 449
Target Start/End: Complemental strand, 29149782 - 29149635
Alignment:
Q  303 ctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataat 400  Q
    |||| |||||||||||||| |||||||||||||  ||||  |||||||| ||||||| |||| | ||| |||| ||||||||| |||||| |||||||||    
T  29149782 ctttgaaagacaagattaagattaatttctctagtaggctgattttcaactaaaataaaatttgcttg-ttatgaaaattatctcaattttttggataat 29149684  T
Q  401 aaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||  |||||||||||||||  |||  |||||||||||||||||    
T  29149683 aaatatcacaaatatttttaatattaatgaggcacattattaggaacaa 29149635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 340 - 446
Target Start/End: Original strand, 9409564 - 9409671
Alignment:
Q  340 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatt 438  Q
    ||||||||||| ||||||| |||| | || ||||| ||||||||||||||||||||||||| |||||||  | |||||||||||||| ||||| ||||||    
T  9409564 cccattttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataaaaaatatcgtcgatatttttaatattagtgaagcacatt 9409663  T
Q  439 attaggaa 446  Q
    ||||||||    
T  9409664 attaggaa 9409671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 194 - 449
Target Start/End: Original strand, 16040055 - 16040308
Alignment:
Q  194 atgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaatt 293  Q
    ||||||| || || ||| || ||||||||||||||| |||| || |||||||  |||  ||||| ||||| ||||||||  ||| | ||||| |||   |    
T  16040055 atgaatgtgtttcgcatgatcttgcattatcaaattcaattctgcaatcctttcaatcaattcaagaaagatgacattattatattgatatagttt---t 16040151  T
Q  294 ttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttc 391  Q
    ||||| ||  ||| ||||| || ||||| |||||| ||||||  |||||||||||||| |||||||  ||| |||| ||||| ||||||||| |||||||    
T  16040152 ttttggaat-tttgaaagataatattaagattaatatctctagtaggcccattttcaattaaaataagatttgttttgttatgaaaattatctcaatttc 16040250  T
Q  392 ttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    || ||||| |||||||| |||||||||| | ||| ||||  |||||||||||||||||    
T  16040251 tttgataaaaaatatcaccaatattttttaaattagtgagacacattattaggaacaa 16040308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 314 - 449
Target Start/End: Complemental strand, 38491156 - 38491019
Alignment:
Q  314 aagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagca 411  Q
    |||||||| |||||||| ||||  |||||||||||||| |||||||||||| |||| ||||| |||||| ||| |||||  ||||||||||||||||       
T  38491156 aagattaagattaatttatctagtaggcccattttcaactaaaatataatttgttttgttatgaaaattctcctaattttctggataataaatatcacat 38491057  T
Q  412 atatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||||||||||||| || |  |||||||||||||||||    
T  38491056 atatttttaatattagtaagacacattattaggaacaa 38491019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 445
Target Start/End: Original strand, 13382615 - 13382718
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||  |||||||||||||||||||||||||||||||||  | |||||||||||||| ||||| |||||||||    
T  13382615 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacattatt 13382714  T
Q  442 agga 445  Q
    ||||    
T  13382715 agga 13382718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 154 - 229
Target Start/End: Original strand, 23318485 - 23318560
Alignment:
Q  154 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatt 229  Q
    |||||||||||||||||||||||| ||| |||||||||| |||||||| |||| ||| ||||||||||||||||||    
T  23318485 ccacatgatcctaaatgcgtctcacattagtttcatgataatgaatgcatctcgcatgattttgcattatcaaatt 23318560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 7850425 - 7850287
Alignment:
Q  313 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagc 410  Q
    ||||||||| ||||||||||| |  ||| |||||||||| |||||||||||| |||| ||||| |||||| || ||||||  ||||||||||||||||      
T  7850425 caagattaagattaatttctccagtaggtccattttcaactaaaatataatttgttttgttatgaaaattctctcaattttctggataataaatatcaca 7850326  T
Q  411 aatatttttaatattcgtgaatcacattattaggaacaa 449  Q
     |||||||||||||| || |  |||||||||||||||||    
T  7850325 tatatttttaatattagtaagacacattattaggaacaa 7850287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 375 - 448
Target Start/End: Original strand, 20892315 - 20892388
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaaca 448  Q
    ||||||||||||| |||||||| ||||||||||| |||||||||||||||| ||||  ||||||||||||||||    
T  20892315 aaaattatcccaaattcttggaaaataaatatcatcaatatttttaatattagtgaggcacattattaggaaca 20892388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 158 - 298
Target Start/End: Complemental strand, 23151681 - 23151541
Alignment:
Q  158 atgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattca 257  Q
    |||||| | ||||||||| | || |||||||||||||||||||| |||| ||| || ||||| ||||||||| ||||||| |||||||  |||  |||||    
T  23151681 atgatcatgaatgcgtcttacatcggtttcatgatcatgaatgcatctcgcatgatcttgcaatatcaaattcaattttgcaatcctttcaatcaattca 23151582  T
Q  258 cgaaagttgacattaccataattatataatttaattttttg 298  Q
     |||| ||||||||||  || | |||||||||| |||||||    
T  23151581 agaaatttgacattacagtattgatataatttatttttttg 23151541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 449
Target Start/End: Complemental strand, 13490482 - 13490372
Alignment:
Q  340 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatt 438  Q
    ||||||||||| ||||||| |||| | || ||||| ||||| ||| ||||||||||||||||||||||   | |||||||||||||| |||||  |||||    
T  13490482 cccattttcaactaaaatagaatttgctttgttatgaaaatcatctcaatttcttggataataaatattgtcgatatttttaatattagtgaagtacatt 13490383  T
Q  439 attaggaacaa 449  Q
    |||||||||||    
T  13490382 attaggaacaa 13490372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 375 - 445
Target Start/End: Complemental strand, 18889124 - 18889054
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattagga 445  Q
    ||||||||| |||||||||||||||||||||||  | |||||||||||||| ||||| |||||||||||||    
T  18889124 aaaattatctcaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacattattagga 18889054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 343 - 449
Target Start/End: Complemental strand, 23962939 - 23962832
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||| ||||||||| |||||||||||||||||||||||    ||||||||||||||  |||| ||| |||||    
T  23962939 attttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatatcgttgatatttttaatattaatgaagcacgttatt 23962840  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  23962839 aggaacaa 23962832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 375 - 449
Target Start/End: Complemental strand, 2677021 - 2676947
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||||  |||||||||||||||||||||  | ||||||||||||||  |||| |||||||||||||||||    
T  2677021 aaaattatcctcatttcttggataataaatatcgtcgatatttttaatattaatgaagcacattattaggaacaa 2676947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 350
Target Start/End: Original strand, 20891318 - 20891416
Alignment:
Q  253 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaa 350  Q
    ||||| ||||||||||||| | ||| | |||||||||| ||||| | || |||| |||||||| ||||| |||||||||||||| ||||||||||||||    
T  20891318 attcaagaaagttgacatttctatattaatataatttattttttgggaatctttgaaagacaaaattaagattaatttctctaataggcccattttcaa 20891416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 23319701 - 23319775
Alignment:
Q  259 gaaagttgacattaccataattatataatttaa-ttttttgaaacctttaaaagacaagattaaaattaatttct 332  Q
    ||||||||||||||| ||| | ||||||||||| |||||||||||| || |||||||| ||||| ||||||||||    
T  23319701 gaaagttgacattactatattgatataatttaatttttttgaaacccttgaaagacaaaattaagattaatttct 23319775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 271
Target Start/End: Complemental strand, 29150599 - 29150502
Alignment:
Q  174 ctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacatt 271  Q
    |||| ||||||||||| |||||||||||||| ||||| || |||||||||||| || |||| || |||| ||  |||  ||||| |||||||||||||    
T  29150599 ctcatattggtttcataatcatgaatgcgtcacacatgatattgcattatcaacttcaattatgcaatcttttcaatcaattcaagaaagttgacatt 29150502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 8806027 - 8806076
Alignment:
Q  57 cacctaagaataataacaccaaaaaagtttacattactaaacgcgtctca 106  Q
    ||||||||| ||||||||| ||||||||| ||||||||||| ||||||||    
T  8806027 cacctaagagtaataacacaaaaaaagttgacattactaaatgcgtctca 8806076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 442
Target Start/End: Original strand, 16686726 - 16686794
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaata-tttttaatattcgtgaatcacattatta 442  Q
    ||||| |||||||||||| |||||||||||||||  |||| ||||||||||| ||||  ||||||||||    
T  16686726 aaaatcatcccaatttctcggataataaatatcactaatattttttaatattagtgagacacattatta 16686794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 308 - 408
Target Start/End: Original strand, 14651716 - 14651818
Alignment:
Q  308 aaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaata 405  Q
    |||| ||| ||||| |||||||| ||||| |||||||||||||| |||||||| ||| |||| ||||| || ||| | |||||||  ||||||| |||||    
T  14651716 aaaggcaatattaagattaatttttctaataggcccattttcaactaaaatattattcgttttgttatgaagattcttccaattttctggataacaaata 14651815  T
Q  406 tca 408  Q
    |||    
T  14651816 tca 14651818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 449
Target Start/End: Complemental strand, 40583677 - 40583628
Alignment:
Q  400 taaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||| |||||| ||||||||| ||||  |||||||||||||||||    
T  40583677 taaatatcaccaatatctttaatattagtgacacacattattaggaacaa 40583628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 7e-78; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 157 - 446
Target Start/End: Original strand, 30190997 - 30191288
Alignment:
Q  157 catgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattc 256  Q
    ||||||||||||||||||||| ||  |||||||||||||||||||||||| ||| |||| ||||||||||||| ||||||| ||||||| ||||  ||||    
T  30190997 catgatcctaaatgcgtctcacatcagtttcatgatcatgaatgcgtctcgcatgatttagcattatcaaattcaattttgcaatccttttaatcaattc 30191096  T
Q  257 acgaaagttgacattaccataattatataatttaa-ttttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagtaa 354  Q
    | ||||||||||||||| ||||||||||||||||| ||||||| ||| ||| |||||||| ||||| |||||||||||||  ||||| |||||||| |||    
T  30191097 aagaaagttgacattactataattatataatttaatttttttggaacatttgaaagacaacattaagattaatttctctagtaggcctattttcaactaa 30191196  T
Q  355 aatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaa 446  Q
    |||||||||  ||| |||||||||||||| |||||| ||||||||||||||| |  ||||| ||||||||| ||||| ||||||||||||||    
T  30191197 aatataatttcttttgttataaaattatctcaattttttggataataaatatgactaatatatttaatattagtgaaacacattattaggaa 30191288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 182 - 449
Target Start/End: Complemental strand, 29714053 - 29713788
Alignment:
Q  182 ggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataatta 281  Q
    ||||||||||||||||||||||||||||| || ||||| ||| ||||| ||||||| |||||||  |||  ||||| |||| |||||||||| ||| | |    
T  29714053 ggtttcatgatcatgaatgcgtctcacatgatcttgcaatattaaattcaattttgcaatcctttcaatcaattcaagaaatttgacattacaatattga 29713954  T
Q  282 tataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagtttggttat-aaaatt 380  Q
    ||||||||| ||||||| |||| |  |||||||||||||| |||||||||     |||| ||||||||| |||||||||||| |||| ||||| ||||||    
T  29713953 tataatttatttttttggaaccatagaaagacaagattaagattaatttcgt---aggctcattttcaactaaaatataatttgttttgttatgaaaatt 29713857  T
Q  381 atcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||||||||||| |||||    
T  29713856 atcccaatttcttagataataaatatcaccaatatttttaatattagtgaggcacattattagtaacaa 29713788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 165 - 449
Target Start/End: Original strand, 10992911 - 10993194
Alignment:
Q  165 taaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagt 264  Q
    ||||||||| ||| || |||||||||||| |||||||||||| ||| || ||||| ||||||||| ||||||| |||||||  |||  ||||| ||||||    
T  10992911 taaatgcgtttcacatcggtttcatgatcttgaatgcgtctcgcatgatcttgcaatatcaaattcaattttgcaatcctttcaatcaattcaagaaagt 10993010  T
Q  265 tgacattaccataattatataatttaattttttgaaaccttta-aaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataatt 363  Q
    ||||||||| ||| | |||||||||| |||||||  |    || |||||||||| |||||||||||||     |||| ||||||||| ||||||  ||||    
T  10993011 tgacattacaatattgatataatttatttttttgggaagggtagaaagacaagaataaaattaatttcgt---aggctcattttcaactaaaatgaaatt 10993107  T
Q  364 agtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
     |||| ||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||  |||||||||||||||||    
T  10993108 tgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaatattagtgaggcacattattaggaacaa 10993194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 193 - 446
Target Start/End: Complemental strand, 47185205 - 47184950
Alignment:
Q  193 catgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaat 292  Q
    |||||||| ||||||||| |||||| | ||||||||| || | || |||| ||  |||  ||||| ||||||||||||||  ||| | || ||||||  |    
T  47185205 catgaatgtgtctcacatgattttgtactatcaaattcaactatgcaatcatttcaatcaattcaagaaagttgacattattatattgatgtaatttgtt 47185106  T
Q  293 tttttgaaacctttaaaagacaagattaaaattaatttctctaaaggc-ccattttcaagtaaaatataattagtttggttat-aaaattatcccaattt 390  Q
    |||||| ||||||| |||||||||||||| |||||||||||||  ||  |||||||||| |||||||||||| |||| ||||| ||||||||||||||||    
T  47185105 tttttggaacctttgaaagacaagattaagattaatttctctagtgggtccattttcaactaaaatataatttgttttgttatgaaaattatcccaattt 47185006  T
Q  391 cttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaa 446  Q
     ||||||||||||||||| |||||||| ||||||| |||||  |||||||||||||    
T  47185005 attggataataaatatcaccaatatttgtaatattagtgaagaacattattaggaa 47184950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 193 - 449
Target Start/End: Complemental strand, 1424933 - 1424679
Alignment:
Q  193 catgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaat 292  Q
    ||||||||||| || ||| |||| ||||||||||||| ||||||| ||||||| | ||  ||||  ||||||||||||||| ||||  ||||||||||||    
T  1424933 catgaatgcgtatcgcatgatttagcattatcaaattcaattttgcaatcctttttatcaattctagaaagttgacattactataacgatataatttaat 1424834  T
Q  293 tttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagtaaaatataattagtttggttataaaattatcccaatttc 391  Q
    |||||| ||||||| | |||||| ||||| |||||||||||||  ||||| |||||||| |||||||| |||  ||| ||||||||||||||||||||||    
T  1424833 tttttggaacctttgatagacaacattaagattaatttctctagtaggcctattttcaactaaaatat-attttttttgttataaaattatcccaatttc 1424735  T
Q  392 ttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||||||||  |  ||||  | ||||||| ||||  |||||||||||||||||    
T  1424734 ttggataataaatacgactaata--tataatattagtgaggcacattattaggaacaa 1424679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 154 - 430
Target Start/End: Complemental strand, 12893330 - 12893051
Alignment:
Q  154 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 253  Q
    ||||||||||| ||||| |||||| || |||||||| ||||||||||||| |  ||  || ||||||||||||||| |||| || ||||||| ||||  |    
T  12893330 ccacatgatcccaaatgtgtctcacatcggtttcataatcatgaatgcgttttgcaagatcttgcattatcaaattcaattatgcaatccttttaatcaa 12893231  T
Q  254 ttcacgaaagttgacattaccataattatataatttaatttttt-gaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaag 351  Q
    |||| ||||||||||||||| ||  | |||||||||| |||||| | ||  ||| ||||| ||||||||||||||||||||||  ||| ||||||||||     
T  12893230 ttcaagaaagttgacattactatgttgatataatttattttttttggaatatttgaaagataagattaaaattaatttctctagtaggtccattttcaac 12893131  T
Q  352 taaaatataattagtttggttataaaa-ttatcccaatttcttggataataaatatcagcaatatttttaatattcgtga 430  Q
    ||||||| |||  ||||  |||||||| ||||| ||||||||||||||||||| |||| |||||| ||||||||| ||||    
T  12893130 taaaatagaatatgttttcttataaaaattatctcaatttcttggataataaacatcaccaatatatttaatattagtga 12893051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 172 - 450
Target Start/End: Original strand, 44663183 - 44663447
Alignment:
Q  172 gtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacatt 271  Q
    |||||| || ||||||||||| |||||| |||||| ||| || ||||| ||||||||||||||||| |||||||  |||  ||||| |||| |||||||     
T  44663183 gtctcacatcggtttcatgataatgaatacgtctcgcatgatcttgcaatatcaaatttaattttgcaatcctttcaatcaattcaagaaatttgacat- 44663281  T
Q  272 accataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagtttggt 371  Q
         ||||      |||  ||||||| ||||||  |||||||||||||||| ||||||   |  |||| ||||||||| |||||||||||| |||| ||    
T  44663282 -----aatt------tttttttttttgtaaccttagaaagacaagattaaaaataattt---tgtaggctcattttcaactaaaatataatttgttttgt 44663367  T
Q  372 tat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaag 450  Q
    | | ||||||||  |||||||||||||||||||||||| |||||| ||||||||| ||||  ||||||||||||||||||    
T  44663368 tttgaaaattatttcaatttcttggataataaatatcaccaatatatttaatattagtgaggcacattattaggaacaag 44663447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 264 - 449
Target Start/End: Complemental strand, 1698588 - 1698401
Alignment:
Q  264 ttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataat 362  Q
    |||||||||| ||| | |||||||||| ||| ||| || |||| |||||||||||||| |||||||| ||||  |  || |||||||| | ||||| |||    
T  1698588 ttgacattactatattgatataatttattttcttggaatctttcaaagacaagattaagattaatttatctagtaaacctattttcaacttaaatagaat 1698489  T
Q  363 tagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    | |||| ||||  ||||||||| |||||||||||||||||||||||| | |||||||||||||| ||||| ||||||||||| |||||    
T  1698488 ttgttttgttaggaaaattatctcaatttcttggataataaatatcatcgatatttttaatattagtgaagcacattattagaaacaa 1698401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 155 - 267
Target Start/End: Original strand, 11830316 - 11830428
Alignment:
Q  155 cacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttat 254  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||| ||||||||  |||| ||||||||||||| ||||||| ||||||| ||||  ||    
T  11830316 cacatgatcctaaatgcgtctcacatcagtttcatgatcatgaatgtgtctcacaagatttagcattatcaaattcaattttgcaatccttttaatcaat 11830415  T
Q  255 tcacgaaagttga 267  Q
    ||| |||||||||    
T  11830416 tcaagaaagttga 11830428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 343 - 449
Target Start/End: Original strand, 10994164 - 10994271
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| |||||||||||| | || ||||| |||||||||||||||||||||||||||||||||  | |||||||||||||| | ||| |||||||||    
T  10994164 attttcaactaaaatataatttgctttgttatgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagcgaagcacattatt 10994263  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  10994264 aggaacaa 10994271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 253 - 430
Target Start/End: Original strand, 11639916 - 11640095
Alignment:
Q  253 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaag 351  Q
    ||||| |||| ||||||||||  || | |||||||||| ||||||| || |||| |||||| | |||||  |||||||||| |  ||| ||||||||||     
T  11639916 attcaagaaaattgacattactgtattgatataatttatttttttggaatctttgaaagactatattaaggttaatttctcaagtaggtccattttcaac 11640015  T
Q  352 taaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtga 430  Q
    ||||||| ||||  ||| ||||| |||||||||||||||||||| ||||||||||||| | |||||||||||||| ||||    
T  11640016 taaaataaaatttattttgttatgaaaattatcccaatttcttgaataataaatatcatcgatatttttaatattagtga 11640095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 274 - 425
Target Start/End: Original strand, 16876821 - 16876971
Alignment:
Q  274 cataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggccc-attttcaagtaaaatataattagtttggtt 372  Q
    |||||| |||||||||||||||||| ||| ||| |||||||| ||||| |||||||||||||   | |  |||||||| |||||||| ||| |||| |||    
T  16876821 cataatgatataatttaattttttgcaacattttaaagacaacattaagattaatttctctagttgacttattttcaactaaaatattatttgttttgtt 16876920  T
Q  373 ataaaattatcccaatttcttggataataaatatcagcaatatttttaatatt 425  Q
    |||||||| ||  ||||||||||||||||||||| | |||||| |||||||||    
T  16876921 ataaaattctc--aatttcttggataataaatatgaccaatatatttaatatt 16876971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 353 - 441
Target Start/End: Complemental strand, 17147296 - 17147208
Alignment:
Q  353 aaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||||||  ||| ||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||  |||||||||    
T  17147296 aaaatataatttattttgttatgaaattattccaatttcttggataataaatatcaccaatatttttaatattagtgagacacattatt 17147208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 449
Target Start/End: Complemental strand, 19157182 - 19157075
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| |||| ||||| ||||||||||  |||||||||||||||||||||  | ||||||||||||||  |||| |||||||||    
T  19157182 attttcaactaaaatagaatttgttttgttatgaaaattatcctcatttcttggataataaatatcgtcgatatttttaatattaatgaagcacattatt 19157083  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  19157082 aggaacaa 19157075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 446
Target Start/End: Original strand, 23044880 - 23045015
Alignment:
Q  313 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagc 410  Q
    ||||||||| ||||||||||| |  |||||||||||||| |||||||||||| |||| ||||| |||||| |||||||||  ||||||||||||||||      
T  23044880 caagattaagattaatttctccagtaggcccattttcaactaaaatataatttgttttgttatgaaaattctcccaattttctggataataaatatcaca 23044979  T
Q  411 aatatttttaatattcgtgaatcacattattaggaa 446  Q
     || ||||||||||| || |  ||||||||||||||    
T  23044980 tatctttttaatattagtaagacacattattaggaa 23045015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 449
Target Start/End: Original strand, 27941531 - 27941638
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||| |||||||||||||||||||||||||||||||||  | ||||||||||||||  |||| ||||| |||    
T  27941531 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatcttcgatatttttaatattaatgaagcacataatt 27941630  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  27941631 aggaacaa 27941638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 31884940 - 31885078
Alignment:
Q  313 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataa-aattatcccaatttcttggataataaatatcagc 410  Q
    ||||||||| |||||||||||||  | |||||||||||| ||||||||||||  ||| ||||| | |||| |||||||||  ||||||||||||||||      
T  31884940 caagattaagattaatttctctagtatgcccattttcaactaaaatataatttattttgttatgagaattttcccaattttctggataataaatatcaca 31885039  T
Q  411 aatatttttaatattcgtgaatcacattattaggaacaa 449  Q
     |||||||||||||| || |  |||||||||||||||||    
T  31885040 tatatttttaatattagtaagacacattattaggaacaa 31885078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 291 - 423
Target Start/End: Complemental strand, 53472263 - 53472130
Alignment:
Q  291 attttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaat 388  Q
    |||||||| ||||||| ||| ||| |||||| |||||||| | ||  |||| ||||||||| |||||||||||| |||| ||||| ||||||||| ||||    
T  53472263 attttttggaacctttgaaatacatgattaagattaatttatgtagtaggctcattttcaactaaaatataatttgttttgttattaaaattatctcaat 53472164  T
Q  389 ttcttggataataaatatcagcaatatttttaata 423  Q
    |||||||||||||||| ||| |||| |||||||||    
T  53472163 ttcttggataataaatttcaccaat-tttttaata 53472130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 343 - 446
Target Start/End: Complemental strand, 25071732 - 25071628
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | |  ||||| ||||||||| |||||||||||||||||||||||  | |||||||||||||| ||||| |||||||||    
T  25071732 attttcaactaaaatagaatttgctctgttatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacattatt 25071633  T
Q  442 aggaa 446  Q
    |||||    
T  25071632 aggaa 25071628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 275 - 449
Target Start/End: Complemental strand, 40145621 - 40145448
Alignment:
Q  275 ataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggtta 373  Q
    ||||| ||||||||||||| |||| ||| ||||||| |||| ||||| |||||||| ||||  || |  ||||| || |||||||||||| |||| ||||    
T  40145621 ataatgatataatttaattctttggaacatttaaaaaacaacattaagattaatttttctattagacttattttgaactaaaatataatttgttttgtta 40145522  T
Q  374 taaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||||||   |||| |||||||||||||||||| | |||| | |||||| || ||||  ||||||||||| |||||    
T  40145521 taaaattt--ccaaattcttggataataaatatgaacaatgtatttaatgttagtgaggcacattattagaaacaa 40145448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 445
Target Start/End: Original strand, 53076983 - 53077086
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||  |||||||||||||||||||||||||||||||||  | |||||||||||||| |||||  ||||||||    
T  53076983 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 53077082  T
Q  442 agga 445  Q
    ||||    
T  53077083 agga 53077086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 430
Target Start/End: Original strand, 3917989 - 3918234
Alignment:
Q  194 atgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaa-- 291  Q
    ||||||||||||| ||| || ||||||||||||||| |||| |  ||| |||  |||  ||||| ||||||||||||||| ||| | |||||||||||      
T  3917989 atgaatgcgtctcgcatgatcttgcattatcaaattcaattattcaattctttcaatcaattcaagaaagttgacattactatattgatataatttaatt 3918088  T
Q  292 ----ttttttgaaacctttaaaagacaagattaaaattaatttctc-taaaggcccattttcaagtaaaatataattagtttggttat-aaaattatccc 385  Q
        ||||||| || |||| |||||||| ||||| || ||||| || |  | ||  |||||||| ||||||| |||| |||| ||||| | |||||||||    
T  3918089 ttttttttttggaatctttgaaagacaatattaagataaatttatcttgtaagcatattttcaactaaaatagaatttgttttgttatgagaattatccc 3918188  T
Q  386 aa-tttcttggataataaatatcagcaatatttttaatattcgtga 430  Q
    || ||| |||||| |||||||||| ||| |||||||||||| ||||    
T  3918189 aacttttttggatgataaatatcaccaacatttttaatattagtga 3918234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 292 - 408
Target Start/End: Complemental strand, 4127664 - 4127547
Alignment:
Q  292 ttttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataaaattatcccaattt 390  Q
    ||||||||||||||| |||||||||||||| |||||||||| ||  |  |  |||||||| ||||| ||| || ||||| | | ||||||||| ||||||    
T  4127664 ttttttgaaacctttgaaagacaagattaagattaatttctgtagcaatctaattttcaactaaaaaatactttgtttgttaagaaaattatctcaattt 4127565  T
Q  391 cttggataataaatatca 408  Q
    ||||||||||||||||||    
T  4127564 cttggataataaatatca 4127547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 341 - 449
Target Start/End: Complemental strand, 15760950 - 15760841
Alignment:
Q  341 ccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatta 439  Q
    |||||||||| ||||||| |||| | |  ||||| |||||||||||||||||||||||||||||||||  | |||||||||| ||| ||||| ||| |||    
T  15760950 ccattttcaactaaaataaaatttgctatgttatgaaaattatcccaatttcttggataataaatatcgtcgatatttttaaaattagtgaagcacgtta 15760851  T
Q  440 ttaggaacaa 449  Q
    ||| ||||||    
T  15760850 ttaagaacaa 15760841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 375 - 449
Target Start/End: Complemental strand, 52448199 - 52448125
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||  |||||||||||||||||||||||  | |||||||||||||| ||||| |||||||||| ||||||    
T  52448199 aaaattatatcaatttcttggataataaatatcgtcgatatttttaatattagtgaaacacattattaagaacaa 52448125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 303 - 425
Target Start/End: Original strand, 6024740 - 6024863
Alignment:
Q  303 ctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataat 400  Q
    ||||||||| ||||||||| |||||||| ||||  |||||||||||| | |||||||| ||| |||| ||||| || ||| |||||||||  ||||||||    
T  6024740 ctttaaaag-caagattaagattaatttttctagtaggcccattttctactaaaatattatttgttttgttatgaagattctcccaattttctggataat 6024838  T
Q  401 aaatatcagcaatatttttaatatt 425  Q
    ||||||||   ||||||||||||||    
T  6024839 aaatatcacatatatttttaatatt 6024863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 390 - 449
Target Start/End: Original strand, 24927913 - 24927972
Alignment:
Q  390 tcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||||||||||||  | |||||||||||||| ||||| |||||||||| ||||||    
T  24927913 tcttggataataaatatcgtcgatatttttaatattagtgaagcacattattaagaacaa 24927972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 47185468 - 47185419
Alignment:
Q  36 tgtgaagtagactgcaattt--acacctaagaataataacaccaaaaaag 83  Q
    |||||||||||||| |||||  |||||||||||||||||||||| |||||    
T  47185468 tgtgaagtagactgaaattttgacacctaagaataataacaccagaaaag 47185419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 46947681 - 46947640
Alignment:
Q  183 gtttcatgatcatgaatgcgtctcacataattttgcattatc 224  Q
    ||||| |||||||||||||||||||||| || ||||||||||    
T  46947681 gtttcttgatcatgaatgcgtctcacatgatcttgcattatc 46947640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 2e-75; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 167 - 449
Target Start/End: Original strand, 11648592 - 11648875
Alignment:
Q  167 aatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttg 266  Q
    ||||||||||| || ||||||||||||||||||| ||||| ||| |||||||||||||||||| ||||||| |||| || ||||  ||||| |||||||     
T  11648592 aatgcgtctcacatcggtttcatgatcatgaatgtgtctcgcatgattttgcattatcaaattcaattttgcaatcattttaatcaattcaagaaagtta 11648691  T
Q  267 acattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaag-gcccattttcaagtaaaatataattag 365  Q
    || |||  ||||| ||||||||||||| |||| ||||||| |||||||||||| | |||||||||||||| | | |||||||||| |||||||||||| |    
T  11648692 accttagtataatgatataatttaattatttggaacctttgaaagacaagattgagattaatttctctaatgagtccattttcaactaaaatataatttg 11648791  T
Q  366 tttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||| |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||| ||||  |||||||||||||||||    
T  11648792 ttttgttataaaattatctcaatttctttgataataaatatcaccaatatttttaatattagtgaggcacattattaggaacaa 11648875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 254 - 446
Target Start/End: Original strand, 9382150 - 9382344
Alignment:
Q  254 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagt 352  Q
    |||| ||||||||||||||| ||| | || ||||||||||||||| ||||||| ||||| ||||||||||||||||| ||||| ||| |||||||||| |    
T  9382150 ttcaagaaagttgacattactatattgatgtaatttaattttttggaacctttgaaagaaaagattaaaattaatttttctaataggtccattttcaact 9382249  T
Q  353 aaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaa 446  Q
    ||||||||||| |||| ||||| |||||||||||||||  || |||| ||||||||| |||||||||||||||| ||||| ||||||||||||||    
T  9382250 aaaatataatttgttttgttatgaaaattatcccaattcattagatagtaaatatcaccaatatttttaatattagtgaagcacattattaggaa 9382344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 167 - 425
Target Start/End: Original strand, 24190187 - 24190443
Alignment:
Q  167 aatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttg 266  Q
    |||| |||||| || || ||||||||| ||||||||||||  || || ||||| ||||| ||| ||||||| |||||||  |||  |||||  |||||||    
T  24190187 aatgtgtctcacatcggattcatgatcttgaatgcgtctcgtatgatcttgcaatatcatattcaattttgcaatcctttcaatccattcaaaaaagttg 24190286  T
Q  267 acattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagt 366  Q
    ||||||| ||| | |||||||||| |||||||||||| |  |||||||| ||||| ||||| |||     || | ||||||||| |||||||||||| ||    
T  24190287 acattacaatattgatataatttatttttttgaaaccatagaaagacaaaattaagattaacttcgt---agactcattttcaactaaaatataatttgt 24190383  T
Q  367 ttggttataaaa-ttatcccaatttcttggataataaatatcagcaatatttttaatatt 425  Q
    || ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  24190384 tttgttataaaaattatcccaatttcttggataataaatatcatcaatatttttaatatt 24190443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 183 - 449
Target Start/End: Complemental strand, 9137780 - 9137516
Alignment:
Q  183 gtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattat 282  Q
    |||||||||||||||||||||||| ||| || || || ||| ||||| ||||||| |||||||  |||  ||||| |||  |||||||||  ||| | ||    
T  9137780 gtttcatgatcatgaatgcgtctcgcatgatcttacaatattaaattcaattttgaaatcctttcaatcaattcaagaattttgacattataatattgat 9137681  T
Q  283 ataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagtttggttat-aaaatta 381  Q
    |||||| | ||||||  ||||||  |||||||||||||| ||||||   |    |||| ||||||||| |||||||||||| |||| ||||| |||||||    
T  9137680 ataattaattttttttgaaccttagaaagacaagattaagattaatacat----aggctcattttcaactaaaatataatttgttttgttatgaaaatta 9137585  T
Q  382 tcc-caatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||| |||||||||||||||||||||||| |||||||||||||||| ||||  |||||||||||||||||    
T  9137584 tccacaatttcttggataataaatatcaccaatatttttaatattagtgagacacattattaggaacaa 9137516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 253 - 425
Target Start/End: Original strand, 28374489 - 28374661
Alignment:
Q  253 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaag 351  Q
    ||||| ||||||||| ||||| ||| | |||||||||||||||||  ||| ||||||| |||||||||| |||||||||||||  |  | |||||||||     
T  28374489 attcaagaaagttgaaattactatattgatataatttaatttttttgaacatttaaaaaacaagattaagattaatttctctagtaaactcattttcaac 28374588  T
Q  352 taaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatatt 425  Q
    ||||||||||||  ||||||||||||||||| | ||||||||| ||||||||||||| ||||||||||||||||    
T  28374589 taaaatataatttatttggttataaaattattcaaatttcttgaataataaatatca-caatatttttaatatt 28374661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 283 - 425
Target Start/End: Original strand, 23232178 - 23232322
Alignment:
Q  283 ataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataatt-agtttggttataaaatt 380  Q
    |||||||||||||||| ||| ||| ||||| |||||||||||||||||||  |  |||| ||||||||| |||||||||||| | |||||||||||| ||    
T  23232178 ataatttaattttttggaacatttgaaagaaaagattaaaattaatttcttcagtaggctcattttcaattaaaatataatttattttggttataaagtt 23232277  T
Q  381 atcccaatttcttggataataaatatcagcaatatttttaatatt 425  Q
    |||| ||||||||  ||||||||||||| ||||||||||||||||    
T  23232278 atcctaatttcttcaataataaatatcaccaatatttttaatatt 23232322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 281 - 443
Target Start/End: Complemental strand, 32073413 - 32073246
Alignment:
Q  281 atataatttaatt-ttttgaaacctttaaaagacaagattaaaattaatttctctaaag---gcccattttcaagtaaaatataattagtttggttataa 376  Q
    |||||||||| || ||||| ||||||| || ||||||||||| ||||||||||||||     | |||||||||| |||||||||||| |||| |||  ||    
T  32073413 atataatttatttattttggaacctttgaacgacaagattaagattaatttctctaatatgtgtccattttcaactaaaatataattcgttttgttgcaa 32073314  T
Q  377 a-attatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattag 443  Q
    | |||||| |||||||||||||||||||||||| |||||||||||||||| ||||  |||||||||||    
T  32073313 agattatcacaatttcttggataataaatatcaccaatatttttaatattagtgagacacattattag 32073246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 343 - 449
Target Start/End: Complemental strand, 1981685 - 1981578
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||    
T  1981685 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatcgtcaatatttttaatattaatgaagcacattatt 1981586  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  1981585 aggaacaa 1981578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 343 - 449
Target Start/End: Complemental strand, 45117555 - 45117448
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| |||||||||||| | || ||||| |||||||||||||||||||||||||||||||||  | |||||||||||||| | ||| |||||||||    
T  45117555 attttcaactaaaatataatttgctttgttatgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagcgaagcacattatt 45117456  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  45117455 aggaacaa 45117448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 342 - 449
Target Start/End: Original strand, 4432086 - 4432194
Alignment:
Q  342 cattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattat 440  Q
    ||||||||| ||||||| |||| | || ||||| ||||||||||||||||||||||||||||||||   |||||||||||||||| |||||  |||||||    
T  4432086 cattttcaactaaaataaaatttgctttgttatgaaaattatcccaatttcttggataataaatattgtcaatatttttaatattagtgaagtacattat 4432185  T
Q  441 taggaacaa 449  Q
    |||||||||    
T  4432186 taggaacaa 4432194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 343 - 449
Target Start/End: Complemental strand, 3762786 - 3762679
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||| |||||||||||||||||||||||||||||||||    |||||||||||||| ||||| |||||||||    
T  3762786 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatcgtagatatttttaatattagtgaaacacattatt 3762687  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  3762686 aggaacaa 3762679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 343 - 445
Target Start/End: Complemental strand, 31597611 - 31597508
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||| |||||||||||||||||||||||||||||||||  | |||||||||||||| ||||| |||||||||    
T  31597611 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacattatt 31597512  T
Q  442 agga 445  Q
    ||||    
T  31597511 agga 31597508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 340 - 449
Target Start/End: Original strand, 7972993 - 7973103
Alignment:
Q  340 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatt 438  Q
    ||||||||||| ||||||| |||| | || ||||| ||||||||||||||||||||||||| |||||||  | |||||||||||||| ||||| ||||||    
T  7972993 cccattttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataaaaaatatcgtcgatatttttaatattagtgaagcacatt 7973092  T
Q  439 attaggaacaa 449  Q
    ||||| |||||    
T  7973093 attagaaacaa 7973103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 314 - 449
Target Start/End: Complemental strand, 28509370 - 28509233
Alignment:
Q  314 aagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagca 411  Q
    |||||||| |||||||| ||||  |||||||||||||| |||||||||||| |||| ||||| |||||| ||| |||||  ||||||||||||||||       
T  28509370 aagattaagattaatttttctagtaggcccattttcaactaaaatataatttgttttgttatgaaaattctcctaattttctggataataaatatcacat 28509271  T
Q  412 atatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||||||||||||| || |  |||||||||||||||||    
T  28509270 atatttttaatattagtaagacacattattaggaacaa 28509233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 339 - 442
Target Start/End: Complemental strand, 16729823 - 16729719
Alignment:
Q  339 gcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacat 437  Q
    |||||||||||| ||||||| |||| | || ||||  |||||||||||||||||||||||||||||||||  | |||||||||||||| ||||| |||||    
T  16729823 gcccattttcaactaaaatagaatttgctttgttaagaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacat 16729724  T
Q  438 tatta 442  Q
    |||||    
T  16729723 tatta 16729719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 23232079 - 23232175
Alignment:
Q  141 gagaacaatagacccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttg 237  Q
    ||||| |||||  |||||||||||||||||||||||| || ||||| ||||||||||||| || |||||| ||| |||||||||||||| |||||||    
T  23232079 gagaagaatagggccacatgatcctaaatgcgtctcacatcggttttatgatcatgaatgtgtttcacatgattctgcattatcaaattcaattttg 23232175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 340 - 449
Target Start/End: Complemental strand, 39906339 - 39906229
Alignment:
Q  340 cccattttcaagtaaaatataattagtttggttataaaa-ttatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatt 438  Q
    ||||||||||| ||||||| |||| | || ||||||||| |||| ||||||| |||||||||||||| |  | |||||||||||||| ||||| ||||||    
T  39906339 cccattttcaactaaaatagaatttgctttgttataaaaattattccaatttattggataataaataacgtcgatatttttaatattagtgaagcacatt 39906240  T
Q  439 attaggaacaa 449  Q
    |||||||||||    
T  39906239 attaggaacaa 39906229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 340 - 449
Target Start/End: Complemental strand, 40971534 - 40971424
Alignment:
Q  340 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatt 438  Q
    ||||||||||| ||||||| |||| | || || || ||||||||| |||||||||||||||||||||||  | |||||||||||||| ||||| ||||||    
T  40971534 cccattttcaaataaaatagaatttgctttgtaatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaatattagtgaaacacatt 40971435  T
Q  439 attaggaacaa 449  Q
    |||| ||||||    
T  40971434 attaagaacaa 40971424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 449
Target Start/End: Original strand, 6927561 - 6927668
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| |||||||||||| |||| ||||| |||||| |||||||||  ||||||||||||||||   |||||||||||||| || |  |||||||||    
T  6927561 attttcaactaaaatataatttgttttgttatgaaaattctcccaattttctggataataaatatcacatatatttttaatattagtaagacacattatt 6927660  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  6927661 aggaacaa 6927668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 375 - 449
Target Start/End: Original strand, 7263680 - 7263754
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||| |||||||||||||||||||||||  | |||||||||||||| | ||| |||||||||| ||||||    
T  7263680 aaaattatctcaatttcttggataataaatatcgtcgatatttttaatattagcgaagcacattattaagaacaa 7263754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 425
Target Start/End: Original strand, 2879196 - 2879315
Alignment:
Q  308 aaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataataaata 405  Q
    |||| ||||||||| |||||||| ||||  |||||||||||| | |||||||| ||| |||| ||||| || ||| |||||||||  |||||||||||||    
T  2879196 aaaggcaagattaagattaatttttctagtaggcccattttctactaaaatattatttgttttgttatgaagattctcccaattttctggataataaata 2879295  T
Q  406 tcagcaatatttttaatatt 425  Q
    |||   ||||||||||||||    
T  2879296 tcacatatatttttaatatt 2879315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 343 - 449
Target Start/End: Complemental strand, 24682704 - 24682597
Alignment:
Q  343 attttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||| | |||||||||||| |||| ||||| || ||| |||||||||  | ||||||||||||||  |||||| |||||||| || |  |||||||||    
T  24682704 attttcgactaaaatataatttgtttcgttatgaatattttcccaattttctagataataaatatcacaaatattcttaatattagtaagacacattatt 24682605  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  24682604 aggaacaa 24682597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 341 - 449
Target Start/End: Original strand, 2807702 - 2807811
Alignment:
Q  341 ccattttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatta 439  Q
    |||||||||| |||||||||||| |||| ||| | || ||| || ||||||  |||||||||| |||||  ||||||||||||||| || |  |||||||    
T  2807702 ccattttcaactaaaatataatttgtttcgttgtgaagattctcacaattttctggataataattatcacaaatatttttaatattagtaagacacatta 2807801  T
Q  440 ttaggaacaa 449  Q
    ||| ||||||    
T  2807802 ttatgaacaa 2807811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 24682904 - 24682815
Alignment:
Q  155 cacatgatcctaaatgcgtctcaaattg-gtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatcc 243  Q
    ||||||||||||||||| | ||| || | |||||||||||||||||| ||||  ||| || ||||||||||||||| |||| || |||||    
T  24682904 cacatgatcctaaatgcatgtcacatcgtgtttcatgatcatgaatgtgtcttgcatcatcttgcattatcaaattcaattctgcaatcc 24682815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 961163 - 961243
Alignment:
Q  154 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaatt 234  Q
    ||||||| ||||| |||| ||||| || |||||||||||||  |||||||| |||||| | ||| ||||||||||| ||||    
T  961163 ccacatggtcctacatgcatctcacatcggtttcatgatcacaaatgcgtcccacatattcttgtattatcaaattcaatt 961243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 374
Target Start/End: Original strand, 11994691 - 11994758
Alignment:
Q  308 aaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat 374  Q
    |||| ||| ||||| |||||||| ||||| ||||||||||||||||||||||| ||| |||| |||||    
T  11994691 aaaggcaatattaagattaatttttctaataggcccattttcaagtaaaatattattcgttttgttat 11994758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 11648101 - 11648148
Alignment:
Q  39 gaagtagactgcaattta--cacctaagaataataacaccaaaaaagt 84  Q
    ||||||||||| |||||   ||||||||||||||||||||||||||||    
T  11648101 gaagtagactgaaattttagcacctaagaataataacaccaaaaaagt 11648148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 130; Significance: 4e-67; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 154 - 449
Target Start/End: Original strand, 19091009 - 19091305
Alignment:
Q  154 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 253  Q
    |||||||||||||||||||||||  || |||||||||| | |||||||| ||| ||| || ||||||||||||||| ||||||  |||||||  |||  |    
T  19091009 ccacatgatcctaaatgcgtctcgcatcggtttcatgaacgtgaatgcgactcgcatgatcttgcattatcaaattcaatttttcaatcctttcaatcaa 19091108  T
Q  254 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagt 352  Q
    |||| |||| |||||||||| ||| | ||||||||| |||||||||||||||| ||||| |||||||| |||||||||||||  |||||||||||||| |    
T  19091109 ttcatgaaatttgacattactatattgatataattt-attttttgaaacctttgaaagataagattaagattaatttctctagtaggcccattttcaact 19091207  T
Q  353 aaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||||| |||| ||||| |||||||| | |||||||| |||||||||||||| ||||||||||||||||  |||  |||||||||||||||||    
T  19091208 aaaatataatttgttttgttatgaaaattatacaaatttcttagataataaatatcaccaatatttttaatattattgaggcacattattaggaacaa 19091305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 154 - 442
Target Start/End: Original strand, 13597700 - 13597989
Alignment:
Q  154 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 253  Q
    ||||||| |||||||||||||||| ||  |||||||||||||||||| ||||| ||| |||||||||||||||||||||||||| ||||||| ||||  |    
T  13597700 ccacatgttcctaaatgcgtctcacatcagtttcatgatcatgaatgtgtctcgcatgattttgcattatcaaatttaattttgcaatccttttaatcaa 13597799  T
Q  254 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaattt-ctctaaaggcccattttcaagt 352  Q
    || |  |||| ||| ||||| ||||| |||||||| ||||||||| | |||||||| ||||||||||| |||||||| ||    |||  ||||||||| |    
T  13597800 tttaaaaaagatgaaattactataatcatataattaaattttttggatcctttaaatgacaagattaatattaatttgcttagtaggttcattttcaact 13597899  T
Q  353 aaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatta 442  Q
    ||||||||||| |||| ||||||||||||||||| ||||||||||||||||||| | |||||||||||||||| | ||  ||||||||||    
T  13597900 aaaatataatttgttttgttataaaattatcccattttcttggataataaatatgaccaatatttttaatattagcgaggcacattatta 13597989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 253 - 449
Target Start/End: Complemental strand, 30387033 - 30386836
Alignment:
Q  253 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaag 351  Q
    ||||| ||||||||||||||| ||| | |||||||||||||||||| |||||||||||||||||||||| |||||||| ||||  | ||||||||| ||     
T  30387033 attcaagaaagttgacattactatattgatataatttaattttttggaacctttaaaagacaagattaagattaatttatctagtaagcccatttttaac 30386934  T
Q  352 taaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| ||||  |||||||||||||||||    
T  30386933 taaaatataatttgttttgttataaaattatcctaatttcttggataataaatatcaccgatatttttaatattagtgagacacattattaggaacaa 30386836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 132 - 328
Target Start/End: Original strand, 31548966 - 31549162
Alignment:
Q  132 ttagcacccgagaacaatagacccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaattta 231  Q
    ||||||||||||||||||||   ||||||||||||||||||||| | || ||||||||||||| ||||| || || ||| ||| |||||||||||||| |    
T  31548966 ttagcacccgagaacaatagggacacatgatcctaaatgcgtcttacatcggtttcatgatcacgaatgtgtttcgcatgattgtgcattatcaaattca 31549065  T
Q  232 attttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaat 328  Q
    |||||| |||| || ||||  |||||  |||||||||||||| ||||| |||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  31549066 attttgcaatctttttaatcaattcaaaaaagttgacattactataatgatataatttaattttttggaacctttgaaaaacaagattaaaattaat 31549162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 196 - 446
Target Start/End: Complemental strand, 14904261 - 14904009
Alignment:
Q  196 gaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaatttt 295  Q
    ||||| ||||| ||| || ||||||||||||||| ||   || |||||||  |||  ||||| ||||||||||||||| ||| | || ||||||| ||||    
T  14904261 gaatgtgtctcgcatgatcttgcattatcaaattcaaccatgcaatcctttcaatcaattcaagaaagttgacattactatattgatgtaatttattttt 14904162  T
Q  296 ttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttctt 393  Q
    ||| ||||||| ||||||||||||||||||||||| ||||  ||| | |||||||| |||||||||||| |||| || || |||||||||| ||||  ||    
T  14904161 ttgtaacctttgaaagacaagattaaaattaatttttctagtaggtctattttcaactaaaatataatttgttttgtcatgaaaattatcctaattcatt 14904062  T
Q  394 ggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaa 446  Q
    |||||||||||||||  ||||||||||||||| ||||| ||||||||||||||    
T  14904061 ggataataaatatcacgaatatttttaatattagtgaagcacattattaggaa 14904009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 193 - 449
Target Start/End: Complemental strand, 25621678 - 25621421
Alignment:
Q  193 catgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaat 292  Q
    |||||||| ||||| ||| || ||||||||||||||| || | || ||| |||  |||  ||||| ||||||||||||||| ||  |||||||||||| |    
T  25621678 catgaatgtgtctcgcatgatcttgcattatcaaattcaactatgcaattctttcaatcaattcaagaaagttgacattactatttttatataatttatt 25621579  T
Q  293 tttttgaaacctttaaaagacaagattaaaattaatttctc-taaaggcccattttcaagtaaaatataattagtttggttataaaattatcccaatttc 391  Q
    ||||||||||||||||||||||||||||| |||||||| || |  ||| |||||||||| |||||||||||| |||| | ||| ||| | || ||||||     
T  25621578 tttttgaaacctttaaaagacaagattaagattaatttatcttgtaggtccattttcaactaaaatataatttgttttgctatgaaaatgtctcaattta 25621479  T
Q  392 ttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||||| |||||  |||||| |||||||| ||||| ||||| | |||||||||    
T  25621478 ttggataataagtatcactaatattgttaatattagtgaagcacataagtaggaacaa 25621421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 253 - 449
Target Start/End: Original strand, 38566131 - 38566321
Alignment:
Q  253 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagt 352  Q
    ||||| |||| |||||||||| ||| | |||||||||   |||||||||||||  |||||||||||||| ||||||||| ||  |||| || |||||| |    
T  38566131 attcaagaaatttgacattacaatattgatataattt---tttttgaaaccttagaaagacaagattaagattaatttc-ct--aggctca-tttcaact 38566223  T
Q  353 aaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||  |||||||||||||||||    
T  38566224 aaaatataatttgttttgttatgaaaattatcccaatttcttggataataaatatcaccaatatttttaatattagtgacgcacattattaggaacaa 38566321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 154 - 449
Target Start/End: Complemental strand, 6883278 - 6882980
Alignment:
Q  154 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 253  Q
    ||||||||||  ||||  || ||| |||||||||||||||| ||||| ||||||| | || || ||| |||||||| |||| |  |||||||  |||  |    
T  6883278 ccacatgatctcaaatatgtttcacattggtttcatgatcaagaatgtgtctcacgtgatcttccataatcaaattcaattctagaatcctttcaatcaa 6883179  T
Q  254 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagt 352  Q
    |||| ||||||||||||||| |||   || |||||| |||||||| ||||||||||| |||||||||| ||||||||||| |  ||||   ||||||| |    
T  6883178 ttcaagaaagttgacattactatatcgatgtaattt-attttttggaacctttaaaaaacaagattaagattaatttctcaagtaggcatgttttcaact 6883080  T
Q  353 aaaatataa--ttagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||||||||  ||  ||| ||||| ||||||||| |||||||||||||||||| ||||| |||||||||||||||| ||||  |||||||||| ||||||    
T  6883079 aaaatataattttttttttgttatgaaaattatctcaatttcttggataataagtatcaccaatatttttaatatttgtgagacacattattaagaacaa 6882980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 253 - 449
Target Start/End: Complemental strand, 10023090 - 10022892
Alignment:
Q  253 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaag 351  Q
    ||||| ||||||||||||||  |||   |||||||||  ||||||||||||||||||||||| |||||| |||||||||||||  |   ||| ||||||     
T  10023090 attcaagaaagttgacattattatatagatataatttgtttttttgaaacctttaaaagacatgattaagattaatttctctagtaaaaccactttcaac 10022991  T
Q  352 taaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||| || |||| ||||| ||||||||| |||||||||||||||||||||||  |||||||||| ||||| ||||  |||||||||||||||||    
T  10022990 taaaatatattttgttttgttatgaaaattatctcaatttcttggataataaatatccccaatattttttatattagtgaggcacattattaggaacaa 10022892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 173 - 449
Target Start/End: Original strand, 11199129 - 11199407
Alignment:
Q  173 tctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacatta 272  Q
    ||||| || |||||||| || |||| || || |||||| || ||| ||||||||||| |||| |  |||||||  |||  || || |||| |||||||||    
T  11199129 tctcacatcggtttcataatgatgagtgtgtttcacatgatcttgaattatcaaattcaattctacaatcctttcaatcaatacaagaaaattgacatta 11199228  T
Q  273 ccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggt 371  Q
    | ||| | |||| ||||| |||||||||| |||| ||| |||||||||| |||||||||||||  | |||||||||||| ||||||| |||| |||| |     
T  11199229 ctatattgatatgatttatttttttgaaatctttgaaaaacaagattaagattaatttctctagtatgcccattttcaactaaaatagaatttgttttgc 11199328  T
Q  372 tat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    | | ||||| ||| |||||||||| ||||||||||||| | ||||||||||||||  |||  |||||||||||||||||    
T  11199329 tttgaaaatcatctcaatttcttgcataataaatatcatcgatatttttaatattaatgaggcacattattaggaacaa 11199407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 270 - 449
Target Start/End: Complemental strand, 9057561 - 9057382
Alignment:
Q  270 ttaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagttt 368  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||| ||||| |||||||||||||  |  |  || ||||| |||||||||||| ||||    
T  9057561 ttaccataatgatataatttaattttttggaacctttgaaagacaatattaagattaatttctctagtaaacttatattcaattaaaatataatttgttt 9057462  T
Q  369 ggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
     || ||||||||||| |||||||||||||||||||||| | |||||| |||||| || ||||  ||||||||||| |||||    
T  9057461 tgt-ataaaattatctcaatttcttggataataaatatgaccaatatatttaattttagtgaggcacattattagaaacaa 9057382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 343 - 449
Target Start/End: Complemental strand, 33054862 - 33054755
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| |||||||||||| |||| ||||| |||||||||  ||||| ||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  33054862 attttcaactaaaatataatttgttttgttatgaaaattatcataatttattggataataaatatcaccaatatttttaatattagtgaagcacattatt 33054763  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  33054762 aggaacaa 33054755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 314 - 449
Target Start/End: Original strand, 7880344 - 7880481
Alignment:
Q  314 aagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagca 411  Q
    |||||||| |||||||||||||  |||||||||||||| |||||||||||| |||| ||||| |||||| |||||||||  ||||||||||||||||       
T  7880344 aagattaagattaatttctctagtaggcccattttcaactaaaatataatttgttttgttatgaaaattctcccaattttctggataataaatatcacat 7880443  T
Q  412 atatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||||||||||||| || |  |||||||||||||||||    
T  7880444 atatttttaatattagtaagacacattattaggaacaa 7880481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 183 - 449
Target Start/End: Original strand, 38422792 - 38423058
Alignment:
Q  183 gtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattat 282  Q
    |||||| ||||||||||| ||||||||| || ||||||||||||||| |||| |   ||||||  |||  || || |||| |||||| ||| ||| | ||    
T  38422792 gtttcacgatcatgaatgtgtctcacatgatcttgcattatcaaattcaattctacgatcctttcaatcaatccaagaaaattgacactactatattgat 38422891  T
Q  283 ataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataaa-att 380  Q
    |||||||| ||||||| | ||| |||| || |||||| | ||| ||||||| |  | || ||||||||| |||||||| ||| |||| ||||| || |||    
T  38422892 ataattta-ttttttggatcctctaaa-gaaaagattgagatttatttctcaagtatgctcattttcaactaaaatatcatttgttttgttatgaagatt 38422989  T
Q  381 atcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
     || |||||||||||||||||||||||| |||||||||||  ||| ||||  |||||||||||||||||    
T  38422990 ctctcaatttcttggataataaatatcatcaatatttttataattagtgaggcacattattaggaacaa 38423058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 183 - 449
Target Start/End: Original strand, 41302303 - 41302569
Alignment:
Q  183 gtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagtt-gacattaccataatta 281  Q
    |||||||||||||||||| |||||  || || ||| | ||| ||||| ||||||  |||||||  |||  |||||  ||| || |||||| | ||| | |    
T  41302303 gtttcatgatcatgaatgtgtctcgtatgatcttgtaatattaaattcaattttacaatcctttcaatcaattcaataaaatttgacattgcgatattga 41302402  T
Q  282 tataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttc-aagtaaaatataattagtttggttat-aaaat 379  Q
    ||||||||| ||||||| || |||  |||||||||||||| || ||||||     |||| ||||||  || |||||||||||| |||| ||||| |||||    
T  41302403 tataatttatttttttggaatcttagaaagacaagattaagatcaatttcgt---aggctcatttttgaactaaaatataatttgttttgttatgaaaat 41302499  T
Q  380 tatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||||| ||||||||||||||||| |||||||| ||||||| ||||  |||||||||| ||||||    
T  41302500 tatcccaattttttggataataaatatcaacaatatttgtaatattagtgaggcacattattacgaacaa 41302569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 172 - 449
Target Start/End: Complemental strand, 24484734 - 24484458
Alignment:
Q  172 gtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacatt 271  Q
    |||||| || |||||||| || ||||||||||||| | | || ||||| ||||||||| ||||||| ||| |||  ||   ||||| |||| ||||||||    
T  24484734 gtctcacatcggtttcattattatgaatgcgtctcgcttgatcttgcaatatcaaattcaattttgcaatgctttcaaccaattcaagaaatttgacatt 24484635  T
Q  272 accataattatataattta---attttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagttt 368  Q
    || ||| | ||||||||||   |||||||  ||||    |||||||||||||| ||||||||   |   | | ||||||||| |||||||||||| ||||    
T  24484634 acaatattgatataatttagtaatttttt--aaccacagaaagacaagattaagattaattttgtt---gcctcattttcaactaaaatataatttgttt 24484540  T
Q  369 ggttata-aaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
     |||||  |||||||  ||||||||||||||||||||||||  ||||||||||||||| || |  |||||||||||||||||    
T  24484539 tgttatgtaaattatttcaatttcttggataataaatatcacaaatatttttaatattagttaggcacattattaggaacaa 24484458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 375 - 449
Target Start/End: Original strand, 41422923 - 41422997
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||    
T  41422923 aaaattatcccagtttcttggataataaatatcaccaatatttttaatattagtgaagcacattattaggaacaa 41422997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 340 - 449
Target Start/End: Original strand, 41825976 - 41826086
Alignment:
Q  340 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatt 438  Q
    ||||||||||| ||||||| |||| |||| || || ||||||||| |||||||||||||||||||||||  | |||||||||||||| ||||| ||||||    
T  41825976 cccattttcaaataaaatagaatttgttttgtaatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacatt 41826075  T
Q  439 attaggaacaa 449  Q
    |||| ||||||    
T  41826076 attaagaacaa 41826086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 446
Target Start/End: Complemental strand, 29303287 - 29303152
Alignment:
Q  313 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataa-aattatcccaatttcttggataataaatatcagc 410  Q
    ||||||||| |||||||||||||  |||||||||||||| |||||||||||| |||| ||| | | |||| |||||||||  ||||||||||||||||      
T  29303287 caagattaagattaatttctctagtaggcccattttcaactaaaatataatttgttttgttcttagaattctcccaattttctggataataaatatcaca 29303188  T
Q  411 aatatttttaatattcgtgaatcacattattaggaa 446  Q
     |||||||||||||| || |  ||||||||||||||    
T  29303187 tatatttttaatattagtaagacacattattaggaa 29303152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 340 - 449
Target Start/End: Complemental strand, 2554148 - 2554038
Alignment:
Q  340 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatt 438  Q
    ||||||||||| ||||||| |||| | || || || ||||||||| |||||||||||||||||||||||  | |||||||||||||| ||||| ||||||    
T  2554148 cccattttcaaataaaatagaatttgctttgtaatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacatt 2554049  T
Q  439 attaggaacaa 449  Q
    |||| ||||||    
T  2554048 attaagaacaa 2554038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 19678139 - 19678001
Alignment:
Q  313 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataa-aattatcccaatttcttggataataaatatcagc 410  Q
    ||||||||| |||||||||||||  || ||||||||||| |||||||||||| |||| ||||| | |||| |||||||||  ||||||||||||||||      
T  19678139 caagattaagattaatttctctagtagacccattttcaactaaaatataatttgttttgttatgagaattctcccaattttctggataataaatatcaca 19678040  T
Q  411 aatatttttaatattcgtgaatcacattattaggaacaa 449  Q
     |||||||||||||| || |  ||||||||||| |||||    
T  19678039 tatatttttaatattagtaagacacattattagaaacaa 19678001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 340 - 449
Target Start/End: Original strand, 22575996 - 22576106
Alignment:
Q  340 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatt 438  Q
    ||||||||||| ||||||| |||| | || ||||| |||||||||||||||| ||||||||||||||||  | |||||||||||||| ||||  || |||    
T  22575996 cccattttcaactaaaatagaatttgctttgttatgaaaattatcccaattttttggataataaatatcgtcgatatttttaatattagtgaggcaaatt 22576095  T
Q  439 attaggaacaa 449  Q
    |||||||||||    
T  22576096 attaggaacaa 22576106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 340 - 449
Target Start/End: Original strand, 27861833 - 27861943
Alignment:
Q  340 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatt 438  Q
    ||||||||||| ||||||| |||| | || ||||| |||||||| |||||||||||||||||||||||   | |||||||||||||| |||||  |||||    
T  27861833 cccattttcaactaaaatagaatttgctttgttatgaaaattattccaatttcttggataataaatattgtcgatatttttaatattagtgaagtacatt 27861932  T
Q  439 attaggaacaa 449  Q
    |||||||||||    
T  27861933 attaggaacaa 27861943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 449
Target Start/End: Original strand, 44314058 - 44314165
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||| ||||||||| |||||||||||||||||||||||  | ||||||||||||||  |||| ||||| |||    
T  44314058 attttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaatattaatgaagcacataatt 44314157  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  44314158 aggaacaa 44314165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 449
Target Start/End: Original strand, 44322237 - 44322344
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||| ||||||||| |||||||||||||||||||||||  | ||||||||||||||  |||| ||||| |||    
T  44322237 attttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaatattaatgaagcacataatt 44322336  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  44322337 aggaacaa 44322344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 449
Target Start/End: Original strand, 45277506 - 45277613
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| |||||||||||| |||| ||||| |||||| |||||||||  ||||||||||||||||   |||||||||||||| || |  |||||||||    
T  45277506 attttcaactaaaatataatttgttttgttatgaaaattctcccaattttctggataataaatatcacatatatttttaatattagtaagacacattatt 45277605  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  45277606 aggaacaa 45277613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 375 - 445
Target Start/End: Complemental strand, 19685849 - 19685779
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattagga 445  Q
    |||||||||||||||||||||||||||||||||  | |||| ||||||||| ||||| |||||||||||||    
T  19685849 aaaattatcccaatttcttggataataaatatcgtcgatatgtttaatattagtgaagcacattattagga 19685779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 43673105 - 43673191
Alignment:
Q  157 catgatcctaaatgcgtctcaaattg-gtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatc 242  Q
    ||||||| |||||| |||||| |||| |||||||||||| ||||| |||| |||| || ||||||||||||||| ||||||||||||    
T  43673105 catgatcgtaaatgtgtctcacattgtgtttcatgatcaagaatgtgtcttacatgatcttgcattatcaaattcaattttgtaatc 43673191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 449
Target Start/End: Complemental strand, 2565737 - 2565594
Alignment:
Q  308 aaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataataaata 405  Q
    |||| ||| ||||| |||||||| ||||  |||||||||||| | |||||||| ||| |||| ||||| || ||| |||||||||  |||||||||||||    
T  2565737 aaaggcaaaattaagattaatttttctagtaggcccattttctactaaaatattatttgttttgttatgaagattctcccaattttctggataataaata 2565638  T
Q  406 tcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||   |||||||||||||| || |   ||||||||||||||||    
T  2565637 tcacatatatttttaatattagtaagatacattattaggaacaa 2565594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 425
Target Start/End: Original strand, 18781161 - 18781280
Alignment:
Q  308 aaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataataaata 405  Q
    |||| ||||||||| |||||||| ||||  |||||||||||| | |||||||| ||| |||| ||||| || ||| |||||||||  |||||||||||||    
T  18781161 aaaggcaagattaagattaatttttctagtaggcccattttctactaaaatattatttgttttgttatgaagattctcccaattttctggataataaata 18781260  T
Q  406 tcagcaatatttttaatatt 425  Q
    |||   ||||||||||||||    
T  18781261 tcacatatatttttaatatt 18781280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 449
Target Start/End: Original strand, 33015208 - 33015315
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||| ||||||||||| |||| ||||||||||||||||  | ||||||||||||||  |||| ||| |||||    
T  33015208 attttcaactaaaatagaatttgctttgttatgaaaattatccccatttattggataataaatatcgtcgatatttttaatattaatgaagcactttatt 33015307  T
Q  442 aggaacaa 449  Q
    || |||||    
T  33015308 agaaacaa 33015315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 375 - 449
Target Start/End: Complemental strand, 6221442 - 6221368
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||||  |||||||||||||||||||||    ||||||||||||||  |||| |||||||||||||||||    
T  6221442 aaaattatcctcatttcttggataataaatatcgtagatatttttaatattaatgaagcacattattaggaacaa 6221368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 284 - 399
Target Start/End: Original strand, 41422808 - 41422921
Alignment:
Q  284 taatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagtttggttat-aaaattat 382  Q
    ||||||| ||||||| ||||||  ||| |||||||||  |||||||||   | |||| ||||||||| ||||||||||||  ||| ||||| ||||||||    
T  41422808 taatttatttttttggaaccttagaaatacaagattatgattaatttc---ataggctcattttcaactaaaatataatttattttgttatgaaaattat 41422904  T
Q  383 cccaatttcttggataa 399  Q
     ||||||||||||||||    
T  41422905 tccaatttcttggataa 41422921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 449
Target Start/End: Original strand, 31549160 - 31549207
Alignment:
Q  402 aatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||| |||||||||||||||| ||||  |||||||||||||||||    
T  31549160 aatatcaccaatatttttaatattagtgaggcacattattaggaacaa 31549207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 308 - 408
Target Start/End: Original strand, 90308 - 90410
Alignment:
Q  308 aaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaata 405  Q
    |||| ||| ||||| |||||||| ||||| |||||||||||||| |||||||| ||| |||| ||||| || ||| | |||||||  ||||||| |||||    
T  90308 aaaggcaatattaagattaatttttctaataggcccattttcaactaaaatattattcgttttgttatgaagattcttccaattttctggataacaaata 90407  T
Q  406 tca 408  Q
    |||    
T  90408 tca 90410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 315 - 383
Target Start/End: Original strand, 25416047 - 25416117
Alignment:
Q  315 agattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatc 383  Q
    ||||||| |||||||||||||| ||| |||||||||| |||||||||||| | || ||||| |||||||||    
T  25416047 agattaagattaatttctctaataggtccattttcaactaaaatataatttgctttgttatcaaaattatc 25416117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 31548851 - 31548920
Alignment:
Q  39 gaagtagactgcaattta--cacctaagaataataacaccaaaaaagtttacattactaaacgcgtctca 106  Q
    ||||||||||| |||||   |||| |||||||||||||| ||||||||| |||||||||||  |||||||    
T  31548851 gaagtagactgaaattttaccaccaaagaataataacacaaaaaaagttgacattactaaattcgtctca 31548920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 449
Target Start/End: Original strand, 25416114 - 25416159
Alignment:
Q  404 tatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||| |||||||||||||||| ||||  |||||||||||||||||    
T  25416114 tatcaccaatatttttaatattagtgagacacattattaggaacaa 25416159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 4e-64; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 161 - 444
Target Start/End: Original strand, 41509027 - 41509310
Alignment:
Q  161 atcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacga 260  Q
    ||||||||||||||||| || |||||||||||| ||||   ||||| ||| ||||| |||||||||||| |||||||||||| || ||||  ||||| ||    
T  41509027 atcctaaatgcgtctcatatcggtttcatgatcgtgaacatgtctcgcatgattttccattatcaaattcaattttgtaatcattttaata-attcaaga 41509125  T
Q  261 aagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatat 359  Q
    ||||||||||||| || || |||||||||||||||||| ||||||| ||| | |  ||||| |||||||||||||| ||||  |||||||| ||||||||    
T  41509126 aagttgacattactattatgatataatttaattttttggaacctttgaaaaagaccattaagattaatttctctaataggcagattttcaactaaaatat 41509225  T
Q  360 aattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattagg 444  Q
    |||| |||| ||||||||||| || |||||||||||||||||||||| | |||||||||||||||| ||||  ||||||||||||    
T  41509226 aatttgtttagttataaaattgtctcaatttcttggataataaatattaccaatatttttaatattagtgagacacattattagg 41509310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 253 - 449
Target Start/End: Complemental strand, 10142323 - 10142125
Alignment:
Q  253 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaag 351  Q
    ||||| ||||||||||||||| ||| | || ||||||| ||||||| ||||||||||||| |||||||| |||||||||||||  || ||||||||||||    
T  10142323 attcaagaaagttgacattactatattgatgtaatttatttttttgcaacctttaaaagataagattaagattaatttctctagtagacccattttcaag 10142224  T
Q  352 taaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||||||||||| |||| ||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| ||||||||||| |||||    
T  10142223 taaaatataatttgttttgttatgaaaattatcccaatttattggataataaatatcaccaatatttttaatattagtgaagcacattattagaaacaa 10142125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 155 - 430
Target Start/End: Original strand, 10373196 - 10373474
Alignment:
Q  155 cacatgatcctaaatgcgtctcaaattggtttcat-gatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 253  Q
    ||||| ||||||||||| ||||| ||  ||||||  |||||||||| |||||| ||| |||||||||||| ||||| ||||||| |||||||  |||  |    
T  10373196 cacattatcctaaatgcatctcatatcagtttcaacgatcatgaatacgtctcgcatgattttgcattattaaattcaattttgcaatcctttaaatcaa 10373295  T
Q  254 ttcacgaaagttgacattaccataattatataatttaa-ttttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaag 351  Q
    |||| ||||||||||||||  ||||| ||||||||||| ||||||| || ||||||| |||||||||||||||||||| ||||  ||| ||||||||||     
T  10373296 ttcaagaaagttgacattattataatgatataatttaatttttttggaagctttaaatgacaagattaaaattaatttttctagtaggtccattttcaac 10373395  T
Q  352 taaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtga 430  Q
    |||||||||||| ||||  ||||||||||||| |||||||||| ||||| ||||| | |||||||||||||||| ||||    
T  10373396 taaaatataatttgttttattataaaattatctcaatttcttgtataatgaatatgaccaatatttttaatattagtga 10373474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 167 - 449
Target Start/End: Original strand, 1843000 - 1843280
Alignment:
Q  167 aatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttg 266  Q
    |||| |||||| || | |||||||||| |||||||||||| ||| || ||||| ||||| ||| ||||||| | || ||  |||  ||||| ||||||||    
T  1843000 aatgtgtctcacatcgatttcatgatcttgaatgcgtctcgcatgatcttgcaatatcatattcaattttgcagtcttttcaatcaattcaagaaagttg 1843099  T
Q  267 acattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagt 366  Q
    ||||||| ||| |||||||||||| ||||||| ||||||  |||||||||||||| |||||||||   | |||| |||||||||  ||||||||||| ||    
T  1843100 acattacaatatttatataatttatttttttggaaccttagaaagacaagattaagattaatttc---ataggctcattttcaacaaaaatataatttgt 1843196  T
Q  367 ttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    || ||||| ||||||||||||||||||| |||||| ||||||  |||||||||||||||| ||||  |||||||||||||||||    
T  1843197 tttgttatgaaaattatcccaatttcttagataatgaatatctccaatatttttaatattagtgaggcacattattaggaacaa 1843280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 173 - 449
Target Start/End: Complemental strand, 52459276 - 52458998
Alignment:
Q  173 tctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacatta 272  Q
    ||||| ||||||||||| || || |||| || |||||| || ||||||||||||||| |||| || |||||||   ||  | ||| ||||||||||||||    
T  52459276 tctcacattggtttcataatgataaatgtgtttcacatgatcttgcattatcaaattcaattctgcaatcctttctataaagtcaagaaagttgacatta 52459177  T
Q  273 ccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggt 371  Q
    |  || | |||||||||| ||||||| || |||| ||||||||||||||  |||||||||||   |||||||||||||| ||||||| |||| |||| ||    
T  52459176 ctgtattgatataatttatttttttggaatctttgaaagacaagattaaggttaatttctctggtaggcccattttcaactaaaatagaatttgttttgt 52459077  T
Q  372 tat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||| |||| ||||||||||||||||||||||||||||| | |||||||||||||| ||||  |||||||||||||||||    
T  52459076 tatgaaaaatatcccaatttcttggataataaatatcatcgatatttttaatattagtgagacacattattaggaacaa 52458998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 173 - 449
Target Start/End: Complemental strand, 52460533 - 52460255
Alignment:
Q  173 tctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacatta 272  Q
    ||||| ||||||||||| || || |||| || |||||| || ||||||||||||||| |||| || |||||||   ||  | ||| ||||||||||||||    
T  52460533 tctcacattggtttcataatgataaatgtgtttcacatgatcttgcattatcaaattcaattctgcaatcctttctataaagtcaagaaagttgacatta 52460434  T
Q  273 ccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggt 371  Q
    |  || | |||||||||| ||||||| || |||| ||||||||||||||  |||||||||||   |||||||||||||| ||||||| |||| |||| ||    
T  52460433 ctgtattgatataatttatttttttggaatctttgaaagacaagattaaggttaatttctctggtaggcccattttcaactaaaatagaatttgttttgt 52460334  T
Q  372 tat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||| |||| ||||||||||||||||||||||||||||| | |||||||||||||| ||||  |||||||||||||||||    
T  52460333 tatgaaaaatatcccaatttcttggataataaatatcatcgatatttttaatattagtgagacacattattaggaacaa 52460255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 167 - 445
Target Start/End: Original strand, 9921694 - 9921969
Alignment:
Q  167 aatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttg 266  Q
    ||||||||||| || |||||||||||| |||||  ||||| ||| || ||||| ||||| ||| ||||||| |||||||  |||  |||||  ||||||     
T  9921694 aatgcgtctcacatcggtttcatgatcttgaatatgtctcgcatgatcttgcaatatcatattcaattttgaaatcctttaaatcaattcaa-aaagttt 9921792  T
Q  267 acattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagt 366  Q
    ||||||| ||| | |||||||||| | ||||||||||||  |||||||||||||| |||||||||   | |||| ||||||||| |||||||||||| ||    
T  9921793 acattacaatattgatataatttattattttgaaaccttagaaagacaagattaagattaatttc---ataggctcattttcaactaaaatataatttgt 9921889  T
Q  367 ttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattagga 445  Q
    ||  |||  |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||  |||||||||||||    
T  9921890 tttattacgaaaattatcccaatttcttggataataaatatcatcaatatttttaatattagtgagacacattattagga 9921969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 253 - 449
Target Start/End: Complemental strand, 21320192 - 21319994
Alignment:
Q  253 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaag 351  Q
    ||||| ||||||||||||||| ||| |  ||||||||||||||||| ||||||| ||| | |||||||| |||||||| ||||  | ||||||||||||     
T  21320192 attcaagaaagttgacattactatattggtataatttaattttttggaacctttgaaaaataagattaagattaatttatctagtaagcccattttcaac 21320093  T
Q  352 taaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaata-tttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||||||||||| |||| ||||||||||||||| ||||| |||| |||||||||||| || || ||||| ||||  ||||  |||||||||||||||||    
T  21320092 taaaatataatttgttttgttataaaattatcctaatttattggttaataaatatcaccattatttttttatatcagtgagacacattattaggaacaa 21319994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 270 - 449
Target Start/End: Original strand, 29282952 - 29283132
Alignment:
Q  270 ttaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagttt 368  Q
    |||||||||| |||||||||||||||||| ||||||| ||| |||| ||||| |||||||||||||  |  |  || ||||| ||||||||||||  |||    
T  29282952 ttaccataatgatataatttaattttttggaacctttgaaaaacaatattaagattaatttctctagtaaacttatattcaattaaaatataatttattt 29283051  T
Q  369 ggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
     |||||||||||||| |||||||||||||||||||||| | |||||| ||||||||| ||||  ||||||||||| |||||    
T  29283052 tgttataaaattatctcaatttcttggataataaatattaccaatatatttaatattagtgaggcacattattagaaacaa 29283132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 292 - 440
Target Start/End: Original strand, 42512194 - 42512344
Alignment:
Q  292 ttttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatt 389  Q
    ||||||||||||||| |||||||||||||| |||||||||| ||  |||  ||||||||| |||||||||||| |||| ||||| |||||||||||||||    
T  42512194 ttttttgaaacctttgaaagacaagattaagattaatttctttagtaggttcattttcaactaaaatataatttgttttgttatgaaaattatcccaatt 42512293  T
Q  390 tcttggataataaatatcagcaatatttttaatattcgtgaatcacattat 440  Q
    | ||||||||||||||||  |||||||||||||||| ||||| || |||||    
T  42512294 tattggataataaatatccccaatatttttaatattagtgaagcaaattat 42512344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 308 - 449
Target Start/End: Complemental strand, 13957375 - 13957232
Alignment:
Q  308 aaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaata 405  Q
    |||||||||||||| |||| ||||||||  ||| | |||||||| |||||||||||| |||| ||||  |||||||||||||||| ||||||||||||||    
T  13957375 aaagacaagattaagattagtttctctagtaggtctattttcaactaaaatataatttgttttgttacgaaaattatcccaatttattggataataaata 13957276  T
Q  406 tcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||  ||||||||| ||||| ||||| |||||||||||||||||    
T  13957275 tcactaatatttttcatattagtgaagcacattattaggaacaa 13957232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 194 - 406
Target Start/End: Original strand, 24611216 - 24611430
Alignment:
Q  194 atgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaatt 293  Q
    ||||||| || |||||| || || |||||||||||| |||| || ||||| |  |||  ||||| ||||||||||| ||| ||| | ||| |||||| ||    
T  24611216 atgaatgtgtgtcacatgatcttccattatcaaattcaattctgcaatcccttcaatcaattcaagaaagttgacaatactatattaataaaatttattt 24611315  T
Q  294 ttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttc 391  Q
    ||||| || |||| ||||||||||||||  ||||||| ||||  ||||| |||||||| ||||||| |||| |||| ||||| ||||||||| |||||||    
T  24611316 ttttggaatctttgaaagacaagattaaggttaatttttctagtaggccaattttcaactaaaatagaatttgttttgttatgaaaattatctcaatttc 24611415  T
Q  392 ttggataataaatat 406  Q
    |||||||||||||||    
T  24611416 ttggataataaatat 24611430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 343 - 449
Target Start/End: Original strand, 10095037 - 10095144
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||||    
T  10095037 attttcaattaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatcgtcaatatttttaatattaatgaagcacattatt 10095136  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  10095137 aggaacaa 10095144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 340 - 449
Target Start/End: Original strand, 39480263 - 39480373
Alignment:
Q  340 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatt 438  Q
    ||||||||||| ||||||| |||| | || ||||| ||||||||||||||||||||||||| |||||||  | |||||||||||||| ||||| ||||||    
T  39480263 cccattttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataaaaaatatcgtcgatatttttaatattagtgaagcacatt 39480362  T
Q  439 attaggaacaa 449  Q
    |||||||||||    
T  39480363 attaggaacaa 39480373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 340 - 449
Target Start/End: Original strand, 6261593 - 6261703
Alignment:
Q  340 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatt 438  Q
    |||||||| || ||||||| |||| | || ||||| |||||||||||||||| ||| |||| |||||||| |||||||||||||||| ||||| ||||||    
T  6261593 cccatttttaactaaaatagaatttgctttgttatgaaaattatcccaatttattgaataaaaaatatcatcaatatttttaatattagtgaagcacatt 6261692  T
Q  439 attaggaacaa 449  Q
    |||||||||||    
T  6261693 attaggaacaa 6261703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 375 - 449
Target Start/End: Original strand, 7413791 - 7413865
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||| ||||| |||||||||||||||||    
T  7413791 aaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacattattaggaacaa 7413865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 375 - 449
Target Start/End: Original strand, 7459872 - 7459946
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||| ||||| |||||||||||||||||    
T  7459872 aaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacattattaggaacaa 7459946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 317 - 449
Target Start/End: Original strand, 3665451 - 3665584
Alignment:
Q  317 attaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaata 414  Q
    ||||| |||||||||||||| |||| ||||||||| ||||||| |||| |||| ||||| ||||||||| |||||||||| ||||||||||||| | |||    
T  3665451 attaagattaatttctctaataggctcattttcaactaaaatagaatttgttttgttatgaaaattatctcaatttcttgaataataaatatcatcgata 3665550  T
Q  415 tttttaatattcgtgaatcacattattaggaacaa 449  Q
     |||||||||| ||||  || |||||| |||||||    
T  3665551 -ttttaatattagtgagacatattatttggaacaa 3665584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 28143439 - 28143577
Alignment:
Q  313 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataa-aattatcccaatttcttggataataaatatcagc 410  Q
    ||||||||| |||||||||||||  ||  |||||||||| |||||||||||| |||| ||||| | |||| |||||||||  ||||||||||||||||      
T  28143439 caagattaagattaatttctctagtagatccattttcaactaaaatataatttgttttgttatgagaattctcccaattttctggataataaatatcaca 28143538  T
Q  411 aatatttttaatattcgtgaatcacattattaggaacaa 449  Q
     |||||||||||||| || |  |||||||||||||||||    
T  28143539 tatatttttaatattagtaagacacattattaggaacaa 28143577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 313 - 425
Target Start/End: Complemental strand, 51337762 - 51337648
Alignment:
Q  313 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagc 410  Q
    ||||||||| |||||||||||    |||||||||||||| |||||||||||| |||| ||||| |||||| ||||||||| |||||||||||||||||      
T  51337762 caagattaagattaatttctccggtaggcccattttcaactaaaatataatttgttttgttatgaaaattctcccaattttttggataataaatatcaca 51337663  T
Q  411 aatatttttaatatt 425  Q
     ||||||||||||||    
T  51337662 tatatttttaatatt 51337648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 446
Target Start/End: Complemental strand, 36213824 - 36213718
Alignment:
Q  340 cccattttcaagtaaaatataattagtttggttataaaattatcccaatttcttggat-aataaatatcagcaatatttttaatattcgtgaatcacatt 438  Q
    ||||||||||| ||||||| |||| |||| ||||| |||||||||||||||||| ||| || |||||||  ||||| |||||||||| ||||| ||||||    
T  36213824 cccattttcaactaaaatagaatttgttttgttattaaattatcccaatttcttagataaaaaaatatcgtcaata-ttttaatattagtgaagcacatt 36213726  T
Q  439 attaggaa 446  Q
    ||||||||    
T  36213725 attaggaa 36213718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 424
Target Start/End: Original strand, 9900071 - 9900159
Alignment:
Q  337 aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 424  Q
    |||| ||||||||| |||||||||||| ||||  |||| ||||||||||||||||||| |||  ||||||||| |||||||||||||||    
T  9900071 aggctcattttcaactaaaatataattcgtttcattatgaaaattatcccaatttcttagatggtaaatatcaccaatatttttaatat 9900159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 446
Target Start/End: Original strand, 23935828 - 23935896
Alignment:
Q  378 attatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaa 446  Q
    ||||| ||||||||||||||||||||||||| ||||||| |||||||| ||||  ||||||||||||||    
T  23935828 attattccaatttcttggataataaatatcaccaatattattaatattagtgaggcacattattaggaa 23935896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 402
Target Start/End: Complemental strand, 25201183 - 25201039
Alignment:
Q  260 aaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctct-aaaggcccattttcaagtaaaata 358  Q
    |||||||||||||| ||| | |||||||||| ||||||| ||| ||| |||||||||||||| ||||| |||| |    || | ||||| || |||||||    
T  25201183 aaagttgacattactatattgatataatttatttttttggaacttttgaaagacaagattaagattaaattctatggttggtctatttttaactaaaata 25201084  T
Q  359 taattagtttggttat-aaaattatcccaatttcttggataataa 402  Q
    |  || |||| ||||| ||||||||||||||||||||||||||||    
T  25201083 tcttttgttttgttatgaaaattatcccaatttcttggataataa 25201039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 308 - 449
Target Start/End: Original strand, 14192302 - 14192445
Alignment:
Q  308 aaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataataaata 405  Q
    |||| ||||||||| |||||||| ||||  |||||||||||| | |||||||| ||| |||| ||||| || ||| |||||||||  |||||||||||||    
T  14192302 aaaggcaagattaagattaatttttctagtaggcccattttctactaaaatattatttgttttgttatgaagattctcccaattttctggataataaata 14192401  T
Q  406 tcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||   |||||||||||||| || |   ||||||||||||||||    
T  14192402 tcacatatatttttaatattagtaagatacattattaggaacaa 14192445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 25201272 - 25201197
Alignment:
Q  154 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatt 229  Q
    |||||||||||||||| ||||||| ||   ||||||||||||||||||||||||||| ||  ||||||||||||||    
T  25201272 ccacatgatcctaaatacgtctcacatcattttcatgatcatgaatgcgtctcacatgatcatgcattatcaaatt 25201197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 3665324 - 3665406
Alignment:
Q  215 ttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaatttttt 297  Q
    ||||||||||||||| ||||||| |||||||  |||  ||||| ||||||||||||||| ||| | |||||||||| ||||||    
T  3665324 ttgcattatcaaattcaattttgcaatcctttcaatcaattcaagaaagttgacattactatattgatataatttattttttt 3665406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 9896383 - 9896460
Alignment:
Q  167 aatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatcctt 245  Q
    ||||||||||| || |||||||||| |||||||||||||| ||| || ||||| ||||||||| ||||||| |||||||    
T  9896383 aatgcgtctcacatcggtttcatgaacatgaatgcgtctcgcat-atcttgcaatatcaaattcaattttgcaatcctt 9896460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 6830670 - 6830723
Alignment:
Q  183 gtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaatttt 236  Q
    ||||||||||| | |||||||||||||| || ||||||||||||||| ||||||    
T  6830670 gtttcatgatcctaaatgcgtctcacatgatcttgcattatcaaattcaatttt 6830723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 449
Target Start/End: Original strand, 24612043 - 24612098
Alignment:
Q  394 ggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||||||||| | |||||||||||||| ||||   ||||||||||||||||    
T  24612043 ggataataaatatcatcgatatttttaatattagtgagatacattattaggaacaa 24612098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 403
Target Start/End: Original strand, 51890406 - 51890508
Alignment:
Q  303 ctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataat 400  Q
    |||| |||||||||| ||| |||||||||| ||  ||| | |||||||| ||||||||||||  ||| ||||| ||||| || ||||||| |||||||||    
T  51890406 ctttgaaagacaagaataagattaatttctatagtaggtctattttcaactaaaatataatttattttgttatgaaaatgattccaatttattggataat 51890505  T
Q  401 aaa 403  Q
    |||    
T  51890506 aaa 51890508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 403
Target Start/End: Original strand, 51890680 - 51890782
Alignment:
Q  303 ctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataat 400  Q
    |||| |||||||||| ||| |||||||||| ||  ||| | |||||||| ||||||||||||  ||| ||||| ||||| || ||||||| |||||||||    
T  51890680 ctttgaaagacaagaataagattaatttctatagtaggtctattttcaactaaaatataatttattttgttatgaaaatgattccaatttattggataat 51890779  T
Q  401 aaa 403  Q
    |||    
T  51890780 aaa 51890782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 4e-61; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 183 - 445
Target Start/End: Original strand, 24185519 - 24185782
Alignment:
Q  183 gtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattat 282  Q
    ||||||||||||||||||||| | |||| |||||| ||||||||||| ||||||  ||||||| ||| | ||||| | ||||| ||||||| ||| | ||    
T  24185519 gtttcatgatcatgaatgcgttttacatgattttgtattatcaaattcaattttacaatccttttaactaattcaagcaagtttacattactatattgat 24185618  T
Q  283 ataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataaaatta 381  Q
    |||||||||||||||| ||| | | |||||||||||||| ||||||||  |||  || ||||||||||| |||||||||||| |||| ||||||||||||    
T  24185619 ataatttaattttttggaacttctgaaagacaagattaagattaattttgctagtagacccattttcaactaaaatataatttgttttgttataaaatta 24185718  T
Q  382 tcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattagga 445  Q
    ||||||||||||||| ||||||||||| |||||||||||||| | ||||  |||||||||||||    
T  24185719 tcccaatttcttggacaataaatatcaccaatatttttaataatagtgagacacattattagga 24185782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 154 - 425
Target Start/End: Original strand, 5509680 - 5509953
Alignment:
Q  154 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 253  Q
    ||||||||||  |||| ||||||| ||  |||||||||| ||||||||||||||||| || ||||||||||||||| |||| || |||| || ||||  |    
T  5509680 ccacatgatctcaaatacgtctcacatcagtttcatgattatgaatgcgtctcacatgatcttgcattatcaaattcaattctgcaatctttttaatcaa 5509779  T
Q  254 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagt 352  Q
    |||| ||||||||||||||| ||| | ||||||||||| |||||| || |||| |||||||||||||| |||||||| ||||  |||| ||||||||  |    
T  5509780 ttcaagaaagttgacattactatattgatataatttaaatttttggaatctttgaaagacaagattaagattaatttatctagtaggcacattttcatct 5509879  T
Q  353 aaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatatt 425  Q
    |||||| ||||  ||| ||||| ||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  5509880 aaaatagaatttattttgttatgaaaattatcccaatttcttggataataaatatggccaatatttttaatatt 5509953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 253 - 419
Target Start/End: Original strand, 47559476 - 47559642
Alignment:
Q  253 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaag 351  Q
    ||||| ||||||||||||||| ||| | |||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||  | || |||||| ||     
T  47559476 attcaagaaagttgacattactatattgatataatttaattttttgaaac-tttgaaagacaatattaagattaatttctctagtaagcacatttttaac 47559574  T
Q  352 taaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatattttt 419  Q
    |||||||||||| |||| ||||||||||||||||||||| || |||||||||||||| ||||| ||||    
T  47559575 taaaatataatttgttttgttataaaattatcccaatttttttgataataaatatcaccaatactttt 47559642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 194 - 449
Target Start/End: Original strand, 5209545 - 5209802
Alignment:
Q  194 atgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaatt 293  Q
    ||||||| ||||| ||| || |||||||||||||||  |   || |||||||  |||  ||||| ||||||||||||||| ||| | || |||| || ||    
T  5209545 atgaatgtgtctcgcatgatcttgcattatcaaattcgaccatgcaatcctttcaatcaattcaagaaagttgacattactatattgatgtaatatattt 5209644  T
Q  294 ttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttc 391  Q
    ||||||||||||| ||| |||||||||| |||||||||| ||  |||   |||||||| |||||||||||| |||| ||||| ||||||||||||||||     
T  5209645 ttttgaaacctttgaaaaacaagattaagattaatttctttagtaggtatattttcaactaaaatataatttgttttgttatgaaaattatcccaattta 5209744  T
Q  392 ttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||||||||||| |||||| ||||||| | |||||  | ||||| ||||||||    
T  5209745 ttggataataaatatcaccaatatgtttaatagtagtgaagaaaattatcaggaacaa 5209802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 193 - 449
Target Start/End: Complemental strand, 12028027 - 12027769
Alignment:
Q  193 catgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttat-aatttattcacgaaagttgacattaccataattatataatttaa 291  Q
    |||||||| ||||| |||||| |||||||||||||||||| | || ||| ||| | |||  ||| | ||||| || |||||| |||   ||  ||||||     
T  12028027 catgaatgtgtctcgcataatcttgcattatcaaatttaactatgcaattcttttcaatcaattgaagaaagctggcattacaatatcgatgcaatttat 12027928  T
Q  292 ttttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatt 389  Q
    ||||||||| ||||| |||||||| ||||| |||||||||||||| ||| |||||||||| |||||| ||||| |||| ||||| ||||| |||  ||||    
T  12027927 ttttttgaa-cctttgaaagacaatattaagattaatttctctaataggtccattttcaactaaaatctaatttgttttgttatgaaaatcatcaaaatt 12027829  T
Q  390 tcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    | || || ||||||||||| |||||||||||||||| ||||| |||||||||||||||||    
T  12027828 tattcgaaaataaatatcaccaatatttttaatattagtgaagcacattattaggaacaa 12027769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 253 - 449
Target Start/End: Original strand, 47397450 - 47397649
Alignment:
Q  253 attcacgaaagttgacattaccataattatataatttaatttttt-gaaacctttaaaagacaagattaaaattaatttc-tctaa-aggcccattttca 349  Q
    ||||| ||||||||||||||| ||| | |||||||||| |||||| | ||||||| |||||||||||||| ||||||||  ||| | ||| |||||||||    
T  47397450 attcaagaaagttgacattactatattgatataatttattttttttggaacctttgaaagacaagattaagattaattttatctcataggtccattttca 47397549  T
Q  350 agtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaaca 448  Q
    | ||| |||||||| |||   |||| |||||||||| ||||||||||||||||||||||| | |||||||||||||| ||||  ||||||||||||||||    
T  47397550 actaagatataatt-gttccattatgaaaattatccgaatttcttggataataaatatcatcgatatttttaatattagtgatgcacattattaggaaca 47397648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 342 - 449
Target Start/End: Original strand, 49229351 - 49229459
Alignment:
Q  342 cattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattat 440  Q
    ||||||||| ||||||||||||  ||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||    
T  49229351 cattttcaactaaaatataatttattttgttatgaaaattatcccaatttcttggataataaatatcatcaatatttttaatattagtgaaacacattat 49229450  T
Q  441 taggaacaa 449  Q
    || ||||||    
T  49229451 taagaacaa 49229459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 337 - 449
Target Start/End: Complemental strand, 36296788 - 36296675
Alignment:
Q  337 aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcac 435  Q
    |||||||||||||| |||||||||||| |||||||||| |||||| ||||||||| |||||||||||||||||   |||||||||||||| || |  |||    
T  36296788 aggcccattttcaactaaaatataatttgtttggttatgaaaattctcccaattttttggataataaatatcacatatatttttaatattagtaagacac 36296689  T
Q  436 attattaggaacaa 449  Q
    ||||||||||||||    
T  36296688 attattaggaacaa 36296675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 342 - 449
Target Start/End: Complemental strand, 25095255 - 25095147
Alignment:
Q  342 cattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattat 440  Q
    ||||||||| ||||||| |||| | || ||||| ||||||||||||||||||||||||||||||| |  |||||||||||||||| ||||| ||||||||    
T  25095255 cattttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaataccgtcaatatttttaatattagtgaagcacattat 25095156  T
Q  441 taggaacaa 449  Q
    |||||||||    
T  25095155 taggaacaa 25095147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 281 - 442
Target Start/End: Complemental strand, 9023365 - 9023202
Alignment:
Q  281 atataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaa 378  Q
    |||||||||| ||||||| || |||||||||||||||||    ||||||||||||  || | ||||||||| ||||||| |||| |||| ||||| ||||    
T  9023365 atataatttatttttttggaatctttaaaagacaagattttggttaatttctctagtagactcattttcaactaaaatagaatttgttttgttattaaaa 9023266  T
Q  379 ttatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatta 442  Q
     ||||||||||  ||||||||||||||||| | |||||||||||||| ||||  ||||||||||    
T  9023265 ctatcccaattatttggataataaatatcatcgatatttttaatattagtgaggcacattatta 9023202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 340 - 449
Target Start/End: Original strand, 23664120 - 23664230
Alignment:
Q  340 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatt 438  Q
    ||||||||||| ||||||| |||| | || ||||| ||||||||||||||||||||||||||||||||   ||| |||||||||||| ||||| ||||||    
T  23664120 cccattttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatggtcaacatttttaatattagtgaaacacatt 23664219  T
Q  439 attaggaacaa 449  Q
    |||||||||||    
T  23664220 attaggaacaa 23664230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 337 - 449
Target Start/End: Complemental strand, 42722323 - 42722210
Alignment:
Q  337 aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcac 435  Q
    |||||||||||||| |||||||||||| |||||||||| |||||| ||||||||| |||||||||||||||||    ||||||||||||| || |  |||    
T  42722323 aggcccattttcaactaaaatataatttgtttggttatgaaaattctcccaattttttggataataaatatcacatgtatttttaatattagtaagacac 42722224  T
Q  436 attattaggaacaa 449  Q
    ||||||||||||||    
T  42722223 attattaggaacaa 42722210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 343 - 449
Target Start/End: Original strand, 17967339 - 17967446
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||  |||||||||||||||||||||||||||||||||  | |||||||||||||| ||||| |||||||||    
T  17967339 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacattatt 17967438  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  17967439 aggaacaa 17967446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 449
Target Start/End: Original strand, 48596367 - 48596474
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||| |||||||||| ||||||||||||||||||||||  | ||||||||||||||  |||| |||||||||    
T  48596367 attttcaactaaaatagaatttgctttgttatgaaaattatcctaatttcttggataataaatatcgtcgatatttttaatattaatgaagcacattatt 48596466  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  48596467 aggaacaa 48596474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 28945803 - 28945941
Alignment:
Q  313 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataa-aattatcccaatttcttggataataaatatcagc 410  Q
    ||||||||| |||||||||||||  ||  |||||||||| |||||||||||| |||| ||||| | |||| |||||||||  ||||||||||||||||      
T  28945803 caagattaagattaatttctctagtagatccattttcaactaaaatataatttgttttgttatgagaattctcccaattttctggataataaatatcaca 28945902  T
Q  411 aatatttttaatattcgtgaatcacattattaggaacaa 449  Q
     |||||||||||||| || |  |||||||||||||||||    
T  28945903 tatatttttaatattagtaagacacattattaggaacaa 28945941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 445
Target Start/End: Complemental strand, 5049544 - 5049441
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||  |||||||||||||||||||||||||||||||||  | |||||||||||||| |||||  ||||||||    
T  5049544 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 5049445  T
Q  442 agga 445  Q
    ||||    
T  5049444 agga 5049441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 445
Target Start/End: Complemental strand, 21906468 - 21906365
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||  ||||||||||||||||||||||||||||||||   | |||||||||||||| ||||| |||||||||    
T  21906468 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatattgtcgatatttttaatattagtgaagcacattatt 21906369  T
Q  442 agga 445  Q
    ||||    
T  21906368 agga 21906365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 449
Target Start/End: Complemental strand, 22070592 - 22070485
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | |  ||||| ||||||||| |||||| ||||||||||||||||  | |||||||||||||| ||||| |||||||||    
T  22070592 attttcaactaaaatagaatttgctctgttatgaaaattatctcaattttttggataataaatatcgtcgatatttttaatattagtgaagcacattatt 22070493  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  22070492 aggaacaa 22070485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 445
Target Start/End: Original strand, 34307461 - 34307564
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||  |||||||||||||||||||| ||||||||||||  | |||||||||||||| ||||| |||||||||    
T  34307461 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttgaataataaatatcgtcgatatttttaatattagtgaagcacattatt 34307560  T
Q  442 agga 445  Q
    ||||    
T  34307561 agga 34307564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 375 - 445
Target Start/End: Complemental strand, 48999459 - 48999389
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattagga 445  Q
    |||||||||||||||||||||||||||||||||  | |||| ||||||||| ||||| |||||||||||||    
T  48999459 aaaattatcccaatttcttggataataaatatcgtcgatatgtttaatattagtgaagcacattattagga 48999389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 354 - 442
Target Start/End: Complemental strand, 48646232 - 48646143
Alignment:
Q  354 aaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatta 442  Q
    |||||||||| |||| ||| | |||||||||||||||| ||||||||||||||||| |||||||||||||||  ||||  ||||||||||    
T  48646232 aaatataatttgttttgttttgaaaattatcccaatttattggataataaatatcaccaatatttttaatatcagtgaggcacattatta 48646143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 343 - 445
Target Start/End: Original strand, 27430805 - 27430908
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||  |||||||||||||||||||||||||||||||||  | ||||||||| |||| |||||  ||||||||    
T  27430805 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatatcgtcgatatttttagtattagtgaagtacattatt 27430904  T
Q  442 agga 445  Q
    ||||    
T  27430905 agga 27430908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 354 - 448
Target Start/End: Original strand, 12783996 - 12784090
Alignment:
Q  354 aaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaaca 448  Q
    |||||||||| |||| | |||||||||||| |||||| ||||||||||||||  | |||||||||||||||| ||||  ||||| |||| |||||    
T  12783996 aaatataatttgttttgctataaaattatcgcaattttttggataataaatactaccaatatttttaatattagtgaggcacataattaagaaca 12784090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 375 - 449
Target Start/End: Complemental strand, 44310511 - 44310437
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||| ||||||| |||||||| ||||||| ||||||||| |||||| ||||  |||||||||||||||||    
T  44310511 aaaattatctcaatttcatggataattaatatcaccaatattttcaatattagtgaggcacattattaggaacaa 44310437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 449
Target Start/End: Complemental strand, 26221766 - 26221657
Alignment:
Q  341 ccattttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatta 439  Q
    |||||||| | |||||||| ||| |||| ||||| || ||| ||||||||| |||||||||||||||||   |||||||||||||| || |   ||||||    
T  26221766 ccattttctactaaaatattatttgttttgttatgaagattctcccaattttttggataataaatatcacatatatttttaatattagtaagatacatta 26221667  T
Q  440 ttaggaacaa 449  Q
    ||||||||||    
T  26221666 ttaggaacaa 26221657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 273
Target Start/End: Complemental strand, 44310647 - 44310547
Alignment:
Q  173 tctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacatta 272  Q
    ||||| || ||||| || || ||||||| || |||||| || ||||||||||||||| |||| || ||| |||  |||  ||||| ||||||||||||||    
T  44310647 tctcacatcggttttataatgatgaatgtgtttcacatgatcttgcattatcaaattcaattatgcaattctttcaatcaattcaagaaagttgacatta 44310548  T
Q  273 c 273  Q
    |    
T  44310547 c 44310547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 1e-60; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 184 - 445
Target Start/End: Complemental strand, 40934297 - 40934035
Alignment:
Q  184 tttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattata 283  Q
    |||||||||||| ||||| |||| |||||||||||||||||||||  ||||||| |||  || ||||  ||| | ||||||||||||||| ||||| |||    
T  40934297 tttcatgatcataaatgcatctcgcataattttgcattatcaaatccaattttgaaatttttttaatcaattgaagaaagttgacattactataatgata 40934198  T
Q  284 taatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagtaaaatataattagtttggttataaaattat 382  Q
    |||||| |||||||| ||||||| |||||||||||||| ||||||||||| |  |  |||| |||||| ||||| |||||| |||| |||||||||||||    
T  40934197 taatttcattttttgtaacctttgaaagacaagattaagattaatttctccagtatacccaatttcaactaaaacataatttgttttgttataaaattat 40934098  T
Q  383 cccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattagga 445  Q
    || ||||||||||||||||||||| | |||||||||||||||| ||||  |||||||||||||    
T  40934097 ccaaatttcttggataataaatatgatcaatatttttaatattagtgagacacattattagga 40934035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 154 - 449
Target Start/End: Complemental strand, 21863877 - 21863581
Alignment:
Q  154 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 253  Q
    ||||||||| | |||||||||||| || | ||||||| ||| ||||| ||||| ||| || ||| ||||||||||| ||||||| |||| ||  |||  |    
T  21863877 ccacatgataccaaatgcgtctcacatcgatttcatggtcaagaatgtgtctcgcatgatcttggattatcaaattcaattttgcaatcatttcaatcaa 21863778  T
Q  254 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaa-ggcccattttcaagt 352  Q
    ||||  ||||||||||||||  || | |||||||||| ||||||| || |||| || |||| |||||| |||||||||||||   || |||||||||| |    
T  21863777 ttcaaaaaagttgacattactttattaatataattta-ttttttggaatctttgaaggacatgattaagattaatttctctacttggtccattttcaact 21863679  T
Q  353 aaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||||| | || ||||| ||||||||| |||||||||| ||||||||||||| |||||||||||||||| |||   |||||||||||||||||    
T  21863678 aaaatataatttgctttgttatgaaaattatctcaatttcttgaataataaatatcaccaatatttttaatattagtggggcacattattaggaacaa 21863581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 285 - 446
Target Start/End: Original strand, 39038847 - 39039010
Alignment:
Q  285 aatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattat 382  Q
    |||||||||||||||||||||||| |||||||||||| |||||||| ||||  ||||||||||| || |||||||||||| |||| ||||  ||||||||    
T  39038847 aatttaattttttgaaacctttaacagacaagattaagattaatttatctagtaggcccatttttaactaaaatataatttgttttgttacgaaaattat 39038946  T
Q  383 cccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaa 446  Q
    |||||||||||||| ||||||||||| |||||||||||||||| ||||  |||||||| |||||    
T  39038947 cccaatttcttggacaataaatatcaccaatatttttaatattagtgaggcacattatgaggaa 39039010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 161 - 425
Target Start/End: Complemental strand, 9420727 - 9420461
Alignment:
Q  161 atcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacga 260  Q
    |||| ||||||  |||| || |||||||||||||||||||| |||| ||| || ||||||||| ||||| |||| || |||| || ||||  ||||| ||    
T  9420727 atcccaaatgcacctcatatcggtttcatgatcatgaatgcctctcgcatgatcttgcattattaaattcaattctgcaatctttttaatcaattcaaga 9420628  T
Q  261 aagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagtaaaatat 359  Q
    ||||||||||||| | | | |||||||||| ||||||| || ||||||||||||||||||| |||| ||||||||  |  | ||||||||| |||||||     
T  9420627 aagttgacattactacattgatataatttatttttttggaatctttaaaagacaagattaagattattttctctaggaaactcattttcaactaaaataa 9420528  T
Q  360 aattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatatt 425  Q
    ||||  ||| ||||| ||||| |||| ||||||||||||||||||| ||| ||||||||| ||||||    
T  9420527 aatttattttgttatgaaaataatcctaatttcttggataataaatttcaacaatattttaaatatt 9420461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 253 - 423
Target Start/End: Original strand, 28460165 - 28460338
Alignment:
Q  253 attcacgaaagttgacattaccataattatataatttaatttttt--gaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttca 349  Q
    ||||| ||||||||||||| | ||| | |||||||||||||||||  | |||||||||||||||| |||||||||||||| ||||  | |||||||||||    
T  28460165 attcaagaaagttgacattgctatattgatataatttaattttttttggaacctttaaaagacaatattaaaattaatttttctagtaagcccattttca 28460264  T
Q  350 agtaaaatataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaata 423  Q
    | |||||||| ||| |||| |||| |||||||||| || |||||||||||||||||||| ||||||||||||||    
T  28460265 actaaaatatcatttgttttgttaaaaaattatccaaacttcttggataataaatatcaccaatatttttaata 28460338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 158 - 449
Target Start/End: Complemental strand, 5771141 - 5770859
Alignment:
Q  158 atgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattca 257  Q
    |||||| | ||||| ||||| ||  ||||||||||||||||||| | || ||| || ||||| ||  ||||| | ||||| |||||||  |||  |||||    
T  5771141 atgatcatgaatgcatctcacatcagtttcatgatcatgaatgcatgtcgcatgatcttgcaatactaaattcatttttgcaatcctttcaatcaattca 5771042  T
Q  258 cgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaat 357  Q
     |||| |||||||||| ||| | |||||||||| | ||||| || |||  |||||||||||||| |||||||||     |||| ||||||||| ||||||    
T  5771041 agaaatttgacattacaatattgatataatttactcttttggaaacttagaaagacaagattaatattaatttcgt---aggctcattttcaactaaaat 5770945  T
Q  358 ataattagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||  |||  |||||    ||||||||||||||||||||||||||||| |||||||||||||||| ||||  |||||||||||||||||    
T  5770944 ataatttattt--ttata----tatcccaatttcttggataataaatatcaccaatatttttaatattagtgagacacattattaggaacaa 5770859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 282 - 449
Target Start/End: Original strand, 43179378 - 43179546
Alignment:
Q  282 tataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataaaatt 380  Q
    |||||||||||||||   ||||||| ||||| |||||||| |||||||| | ||| || | |||||| || |||||||||||| |||| |||||||||||    
T  43179378 tataatttaatttttgagaacctttgaaagataagattaagattaatttttttaatagactcatttttaactaaaatataatttgttttgttataaaatt 43179477  T
Q  381 atcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||||||||||||||||||||||||||| || |||||| |||||| ||||   ||||||||||||||||    
T  43179478 atcccaatttcttggataataaatatcaccagtattttcaatattagtgaggtacattattaggaacaa 43179546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 154 - 425
Target Start/End: Original strand, 45445899 - 45446165
Alignment:
Q  154 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 253  Q
    ||||||||||  |||| ||||||| || |||||||||||||      |||||| ||| || ||||||||||||||| |||| |  |||| || ||||| |    
T  45445899 ccacatgatctcaaatacgtctcacatcggtttcatgatcac-----cgtctcgcatgatcttgcattatcaaattcaattctacaatctttttaattaa 45445993  T
Q  254 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagt 352  Q
    |||  ||||| | ||||||| ||| | |||||||||  ||||||| ||||||| ||||| ||||||||||||||||||||||  ||||| |||||||| |    
T  45445994 ttcgagaaagctaacattactatattgatataatttt-ttttttggaacctttgaaagaaaagattaaaattaatttctctagtaggccaattttcaact 45446092  T
Q  353 aaaatataattagtttggttataaa-attatcccaatttcttggataataaatatcagcaatatttttaatatt 425  Q
    ||||||||||| ||||  ||||||| |||||  ||||||||||||| || ||||| | ||||||||||||||||    
T  45446093 aaaatataatttgttttcttataaatattatttcaatttcttggatgat-aatatgatcaatatttttaatatt 45446165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 284 - 448
Target Start/End: Original strand, 8604552 - 8604718
Alignment:
Q  284 taatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataaaat-ta 381  Q
    ||||||||||||||| ||||||| |||||||||||||| ||||| || ||||  ||| | |||||||| ||||||||||||  ||| |||||||||  |     
T  8604552 taatttaattttttggaacctttgaaagacaagattaagattaacttatctagtaggtcaattttcaaataaaatataatttatttagttataaaaaatt 8604651  T
Q  382 tcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaaca 448  Q
    ||||| ||| ||||||||||| ||| | ||||||| |||||||| ||||| ||||||||||||||||    
T  8604652 tcccagtttattggataataattatgaccaatattattaatattagtgaagcacattattaggaaca 8604718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 342 - 449
Target Start/End: Original strand, 24441941 - 24442049
Alignment:
Q  342 cattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattat 440  Q
    |||||||||  ||||||||||| |||| ||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||| ||  | ||||||||    
T  24441941 cattttcaacaaaaatataatttgttttgttattaaaattatcccaatttattggataataaatatcaccaatatttttaatattagttgagcacattat 24442040  T
Q  441 taggaacaa 449  Q
    |||||||||    
T  24442041 taggaacaa 24442049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 337 - 449
Target Start/End: Complemental strand, 48636788 - 48636675
Alignment:
Q  337 aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcac 435  Q
    |||||||||||||| |||||||||||| |||||||||| |||||| ||||||||| |||||||||||||||||    ||||||||||||| || |  |||    
T  48636788 aggcccattttcaactaaaatataatttgtttggttatgaaaattctcccaattttttggataataaatatcacatgtatttttaatattagtaagacac 48636689  T
Q  436 attattaggaacaa 449  Q
    ||||||||||||||    
T  48636688 attattaggaacaa 48636675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 341 - 443
Target Start/End: Original strand, 29636904 - 29637007
Alignment:
Q  341 ccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatta 439  Q
    |||||||||| |||||||||||| |||| ||| | |||||||||||||||| ||||||||||||||||| |||||||||||||||| || |  |||||||    
T  29636904 ccattttcaactaaaatataatttgttttgttttgaaaattatcccaatttattggataataaatatcatcaatatttttaatattagtcagacacatta 29637003  T
Q  440 ttag 443  Q
    ||||    
T  29637004 ttag 29637007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 274 - 430
Target Start/End: Original strand, 35118193 - 35118348
Alignment:
Q  274 cataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagtaaaatataattagtttggtt 372  Q
    |||||| ||||| |||||||||||| ||||||| |||||||| ||| | |||||||| | ||  ||||  |||||||| |||||||||||| |||| |||    
T  35118193 cataatgatatagtttaattttttggaacctttgaaagacaacattcagattaatttttttagtaggcttattttcaactaaaatataatttgttttgtt 35118292  T
Q  373 ataaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtga 430  Q
    |||||||  || |||||| ||||||||||||||| | |||||| ||||||||| ||||    
T  35118293 ataaaat--tctcaatttattggataataaatatgaccaatatatttaatattagtga 35118348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 341 - 446
Target Start/End: Original strand, 41822148 - 41822254
Alignment:
Q  341 ccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatta 439  Q
    ||||||| || || |||||||||  ||| ||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||  |||||||    
T  41822148 ccatttttaactataatataatttattttgttatgaaaattatccaaatttcttggataataaatatcatcaatatttttaatattagtgaggcacatta 41822247  T
Q  440 ttaggaa 446  Q
    |||||||    
T  41822248 ttaggaa 41822254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 193 - 438
Target Start/End: Original strand, 8113779 - 8114024
Alignment:
Q  193 catgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaat 292  Q
    |||||||| ||||| ||| || || |||||||||||| || | || |||||||  |||  ||||  |||| |||||||||| ||| | || ||||||| |    
T  8113779 catgaatgtgtctcgcatgatcttccattatcaaattcaactatgcaatcctttcaatcaattcgagaaaattgacattactatattaatgtaatttatt 8113878  T
Q  293 tttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaattt 390  Q
    |||||  ||||||| ||||| || ||||| |||||| ||| ||  |||   |||||||| |||||||||||| |||  ||||| ||||||| ||||| ||    
T  8113879 tttttagaacctttgaaagaaaatattaagattaatatctgtagtaggtttattttcaactaaaatataatttgtt--gttatgaaaattaccccaactt 8113976  T
Q  391 cttggataataaatatcagcaatatttttaatattcgtgaatcacatt 438  Q
     ||||||||||||||||| ||||||||||||||||  |||| ||||||    
T  8113977 attggataataaatatcaccaatatttttaatattaatgaaacacatt 8114024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 6189387 - 6189525
Alignment:
Q  313 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataa-aattatcccaatttcttggataataaatatcagc 410  Q
    ||||||||| |||||||||||||  | |||||||||||| |||||||||||| |||| ||||  | |||| |||||||||  ||||||||||||||||      
T  6189387 caagattaagattaatttctctagtatgcccattttcaactaaaatataatttgttttgttaagagaattctcccaattttctggataataaatatcaca 6189486  T
Q  411 aatatttttaatattcgtgaatcacattattaggaacaa 449  Q
     |||||||||||||| || |  |||||||||||||||||    
T  6189487 tatatttttaatattagtaagacacattattaggaacaa 6189525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 339 - 442
Target Start/End: Original strand, 20394796 - 20394900
Alignment:
Q  339 gcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacat 437  Q
    ||||||||| || ||||||| |||| | || ||||| |||||||||||||||||||| ||||||||||||  | |||||||||||||| ||||| |||||    
T  20394796 gcccattttgaactaaaatagaatttgctttgttatgaaaattatcccaatttcttgaataataaatatcgtcgatatttttaatattagtgaagcacat 20394895  T
Q  438 tatta 442  Q
    |||||    
T  20394896 tatta 20394900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 313 - 422
Target Start/End: Complemental strand, 8069691 - 8069580
Alignment:
Q  313 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagc 410  Q
    ||||||||| |||||||||||||  |||||||||||||| |||||||||||| |||| ||||| | |||| |||||||||  ||||||||||||||||      
T  8069691 caagattaagattaatttctctagtaggcccattttcaactaaaatataatttgttttgttatgagaattctcccaattttctggataataaatatcaca 8069592  T
Q  411 aatatttttaat 422  Q
     |||||||||||    
T  8069591 tatatttttaat 8069580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 449
Target Start/End: Original strand, 8389314 - 8389421
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||| ||||||||||  |||||||||||||||||||||  | ||||||||||||||  |||| |||||||||    
T  8389314 attttcaactaaaatagaatttgctttgttatgaaaattatcctcatttcttggataataaatatcgtcgatatttttaatattaatgaagcacattatt 8389413  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  8389414 aggaacaa 8389421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 445
Target Start/End: Original strand, 31072539 - 31072642
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||  |||||||||||||||||||||||||||||||||  | |||||||||||||| |||||  ||||||||    
T  31072539 attttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 31072638  T
Q  442 agga 445  Q
    ||||    
T  31072639 agga 31072642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 375 - 449
Target Start/End: Complemental strand, 4539922 - 4539848
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||| |||||||||||||||||||||||  | |||||||||||||| ||||| |||||||||| ||||||    
T  4539922 aaaattatctcaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacattattatgaacaa 4539848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 448
Target Start/End: Complemental strand, 44733764 - 44733619
Alignment:
Q  303 ctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataata 401  Q
    |||| ||||||||||||||| |||||||||    |||| ||||||||| |||| || ||||  ||| ||||| ||||||||| || ||||||||||||||    
T  44733764 ctttgaaagacaagattaaagttaatttcttagtaggctcattttcaactaaattagaatttattttgttatgaaaattatctca-tttcttggataata 44733666  T
Q  402 aatatcagcaatatttttaatattcgtgaatcacattattaggaaca 448  Q
    ||||||| | ||||||| |||||| ||||  ||||||||||| ||||    
T  44733665 aatatcatcgatattttcaatattagtgacacacattattagaaaca 44733619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 48238570 - 48238433
Alignment:
Q  313 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagc 410  Q
    ||||||||| ||| |||||||||  |||||||||||||| |||||||||||| |||| ||||| |||||| | |||||||  ||||||||||||||||      
T  48238570 caagattaagatttatttctctagtaggcccattttcaactaaaatataatttgttttgttatgaaaattcttccaattttctggataataaatatcaca 48238471  T
Q  411 aatatttttaatattcgtgaatcacattattaggaacaa 449  Q
     ||||||||||| || || |  |||||||||||||||||    
T  48238470 tatatttttaat-ttagtaagacacattattaggaacaa 48238433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 375 - 449
Target Start/End: Complemental strand, 13754171 - 13754097
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||| |||||||||||||||||||||||    |||||||||||||| ||||| |||||||||| ||||||    
T  13754171 aaaattatctcaatttcttggataataaatatcgttgatatttttaatattagtgaagcacattattaagaacaa 13754097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 375 - 449
Target Start/End: Complemental strand, 18667424 - 18667350
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||| ||||||||||||||||||||||   | |||||||||||||| ||||| |||||||||| ||||||    
T  18667424 aaaattatctcaatttcttggataataaatattgtcgatatttttaatattagtgaagcacattattaagaacaa 18667350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 375 - 449
Target Start/End: Original strand, 35478025 - 35478099
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||| |||||||||||||||||||||||  | |||||||||||||| | ||| |||||||||| ||||||    
T  35478025 aaaattatctcaatttcttggataataaatatcgtcgatatttttaatattagcgaagcacattattaagaacaa 35478099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 443
Target Start/End: Complemental strand, 23381160 - 23381092
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattag 443  Q
    |||||||||||||||| |||||| |||||||||| | |||||||||||||| ||||  || ||||||||    
T  23381160 aaaattatcccaattttttggatgataaatatcaccgatatttttaatattagtgagacatattattag 23381092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 446
Target Start/End: Complemental strand, 135746 - 135639
Alignment:
Q  340 cccattttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatt 438  Q
    ||||||||||| |||||||||||| |||| ||| | || ||| |||||||||  |||||||||||||| |  ||||||||||||||| || |  ||| ||    
T  135746 cccattttcaattaaaatataatttgtttagttgtgaagattctcccaattttctggataataaatattacaaatatttttaatattagtaagacacctt 135647  T
Q  439 attaggaa 446  Q
    ||||||||    
T  135646 attaggaa 135639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 284 - 424
Target Start/End: Original strand, 3124209 - 3124354
Alignment:
Q  284 taatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaa---aatataattagtttggttat-aaaa 378  Q
    ||||||| ||||||| || |||| ||| |||||||||| |||||||| ||||  | || ||||||| | |||   |||| |||| |||| ||||| ||||    
T  3124209 taatttatttttttggaatctttgaaaaacaagattaatattaatttatctagtatgctcattttccaataataaaataaaatttgttttgttatgaaaa 3124308  T
Q  379 ttatcccaatttcttggataataaatatcagcaatatttttaatat 424  Q
     |||| ||||||| |||||||||||||||| | |||||||||||||    
T  3124309 atatctcaatttcctggataataaatatcatcgatatttttaatat 3124354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 39038750 - 39038829
Alignment:
Q  155 cacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaatt 234  Q
    |||||||||||||||| |||||| ||  |||||||||||| ||||  ||||| ||| || ||||||||||||||| ||||    
T  39038750 cacatgatcctaaatgtgtctcacatcagtttcatgatcaagaatatgtctcgcatgatcttgcattatcaaattcaatt 39038829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 375 - 424
Target Start/End: Complemental strand, 1623621 - 1623572
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatat 424  Q
    ||||||||||||||||||||||||||||||||   | |||||||||||||    
T  1623621 aaaattatcccaatttcttggataataaatattgtcgatatttttaatat 1623572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 308 - 408
Target Start/End: Original strand, 19311919 - 19312021
Alignment:
Q  308 aaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaata 405  Q
    |||| ||| ||||| |||||||| ||||| |||||||||||||| |||||||| ||| |||| ||||| || ||| | |||||||  ||||||| |||||    
T  19311919 aaaggcaatattaagattaatttttctaataggcccattttcaactaaaatattattcgttttgttatgaagattcttccaattttctggataacaaata 19312018  T
Q  406 tca 408  Q
    |||    
T  19312019 tca 19312021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 420
Target Start/End: Complemental strand, 15991966 - 15991930
Alignment:
Q  384 ccaatttcttggataataaatatcagcaatattttta 420  Q
    |||||||||||||||||||||||||  ||||||||||    
T  15991966 ccaatttcttggataataaatatcataaatattttta 15991930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 449
Target Start/End: Complemental strand, 36628505 - 36628441
Alignment:
Q  385 caatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||||||||||||||||||||| | |||||||||||  ||| ||||  ||||| ||||| |||||    
T  36628505 caatttcttggataataaatattaccaatatttttataattagtgagacacatgattagtaacaa 36628441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 154 - 449
Target Start/End: Original strand, 18424 - 18721
Alignment:
Q  154 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 253  Q
    ||||||||||| |||||||||||| || | |||||| || ||||||  ||||| ||| || || |||||||||||| || | || ||||| |  |||  |    
T  18424 ccacatgatcccaaatgcgtctcacatcgatttcataattatgaatatgtctcgcatgatctttcattatcaaattcaaatatgcaatccattgaatcaa 18523  T
Q  254 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagt 352  Q
    |||| |||| |||||||||| ||| | |||||||||| ||||||| || |||| |||||| ||||||| ||||| || ||||  |||| ||||||||| |    
T  18524 ttcaagaaatttgacattacaatattgatataatttatttttttggaatctttgaaagactagattaagattaagttttctagtaggctcattttcaact 18623  T
Q  353 aaaatataattagtttggttataaaatta-tcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||||| |||| |||| ||||||||| || || |||||| ||||||||||||||||| |||||||||||||||| ||||  |||||||||||||||||    
T  18624 aaaataaaatttgttttgttataaaaataatctcaatttattggataataaatatcaccaatatttttaatattagtgaggcacattattaggaacaa 18721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 2e-44; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 193 - 446
Target Start/End: Original strand, 11680721 - 11680976
Alignment:
Q  193 catgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaat 292  Q
    |||||||| ||||  ||| || ||||||||||||||| || | || |||||||  |||  ||||| ||||||||||||||  ||| | || | ||||| |    
T  11680721 catgaatgtgtctagcatgatcttgcattatcaaattcaactatgcaatcctttcaatcaattcaagaaagttgacattattatattgatgtgatttatt 11680820  T
Q  293 tttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaattt 390  Q
    | |||||||||||| ||||| |||||||| |||||||| ||||  |||  ||||||||| |||||||||||| |||| ||||| |||||||| |||||||    
T  11680821 tgtttgaaacctttgaaagataagattaagattaatttttctagtaggttcattttcaactaaaatataatttgttttgttatgaaaattattccaattt 11680920  T
Q  391 cttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaa 446  Q
     ||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||    
T  11680921 attggataataaatatcaccaatatttttaatattagtgaagcacattattaggaa 11680976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 253 - 449
Target Start/End: Complemental strand, 19108112 - 19107918
Alignment:
Q  253 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagt 352  Q
    ||||| ||||||||||||||| ||| | | |||||||| ||||||||||||||  ||||| |||||||| |||||||||     | || ||||||||| |    
T  19108112 attcaagaaagttgacattacaatattgaaataatttatttttttgaaaccttacaaagagaagattaagattaatttcgg---atgctcattttcaact 19108016  T
Q  353 aaaatata-attagtttggttataaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||||||| |||  |||| ||  |||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||   ||||||| ||||||||    
T  19108015 aaaatatatatttttttgttttgaaaattatcccaattttttggataataaatatcaccaatatttttaatattagtgaggaacattatcaggaacaa 19107918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 215 - 422
Target Start/End: Original strand, 3229087 - 3229292
Alignment:
Q  215 ttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagaca 314  Q
    ||||| ||||||||| ||||||| |||||||  |||| ||||| |||| |||||||||| ||| | |||||||||| ||||||| ||||||  |||||||    
T  3229087 ttgcaatatcaaattcaattttgcaatcctttcaattaattcaagaaatttgacattacaatattgatataatttatttttttggaaccttagaaagaca 3229186  T
Q  315 agattaaaattaatttctctaaaggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaat 413  Q
     |||||| |||||||||     ||||  |||||||| ||  | |||||| |||| ||||| ||||||||||  |||||||||||||||||||||| ||||    
T  3229187 cgattaagattaatttcgt---aggctaattttcaactaggaaataatttgttttgttatgaaaattatccacatttcttggataataaatatcaccaat 3229283  T
Q  414 atttttaat 422  Q
    |||||||||    
T  3229284 atttttaat 3229292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 253 - 449
Target Start/End: Complemental strand, 31129920 - 31129727
Alignment:
Q  253 attcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagt 352  Q
    ||||| |||||||| ||| || ||| | |||||||||| |||||||||||||   ||| | |||||||| |||||||||   | || | ||||||||| |    
T  31129920 attcaagaaagttgtcatcacaatattaatataatttatttttttgaaacctgagaaatataagattaagattaatttc---atagactcattttcaact 31129824  T
Q  353 aaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||| ||||| |||| ||||| ||||||||||||||||||| |||||||||||||| |||||||||||||| | ||||  |||||||||| ||||||    
T  31129823 aaaatgtaatt-gttttgttatgaaaattatcccaatttctttgataataaatatcatcaatatttttaatactagtgaggcacattattaagaacaa 31129727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 343 - 449
Target Start/End: Complemental strand, 1423044 - 1422937
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||| ||||     
T  1423044 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatcatcaatatttttaatattagtgaaacacgttatc 1422945  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  1422944 aggaacaa 1422937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 215 - 449
Target Start/End: Complemental strand, 26817575 - 26817340
Alignment:
Q  215 ttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataat-ttaattttttgaaacctttaaaagac 313  Q
    ||||||||||||||| |||| || |||| ||  |||  ||||| ||||||| ||||||| ||| | ||| ||  ||  ||||||| || |||| ||||||    
T  26817575 ttgcattatcaaattcaattctgcaatcatttcaatcaattcaagaaagttaacattactatattgataaaaaatttgttttttggaatctttgaaagac 26817476  T
Q  314 aagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagca 411  Q
    |||||||| |||||||||||||  | ||| |||||||| ||||||| |||| |||  ||||| |||| ||||||||||||||||||||||||||||| |     
T  26817475 aagattaagattaatttctctagtatgcctattttcaactaaaatagaatttgtt--gttatgaaaaatatcccaatttcttggataataaatatcatcg 26817378  T
Q  412 atatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||||| ||||||| || |  ||||||||||| |||||    
T  26817377 atatttgtaatattagttaggcacattattagaaacaa 26817340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 314 - 449
Target Start/End: Original strand, 33516611 - 33516748
Alignment:
Q  314 aagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagca 411  Q
    |||||||| |||||||||||||  |||||||||||||| |||||||||||| |||| ||||| |||||| |||||||||  ||||||||||||||||       
T  33516611 aagattaagattaatttctctagtaggcccattttcaactaaaatataatttgttttgttatgaaaattctcccaattttctggataataaatatcacat 33516710  T
Q  412 atatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||||||||||||| || |  |||||||||| ||||||    
T  33516711 atatttttaatattagtaagacacattattatgaacaa 33516748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 340 - 449
Target Start/End: Complemental strand, 18675445 - 18675335
Alignment:
Q  340 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatt 438  Q
    |||||||| || ||||||| |||| | || ||||| |||||||||| ||||||||||||||||||||||  |||||||||||||||| ||||| ||| ||    
T  18675445 cccatttttaactaaaatagaatttgctttgttatgaaaattatcctaatttcttggataataaatatcgacaatatttttaatattagtgaaacacgtt 18675346  T
Q  439 attaggaacaa 449  Q
    |||||||||||    
T  18675345 attaggaacaa 18675335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 1131868 - 1131765
Alignment:
Q  338 ggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcaca 436  Q
    ||||||||||||| ||||||| |||| | ||  |||| |||||||||||||||||||||||||||||||||  | |||||||||||||| ||||| ||||    
T  1131868 ggcccattttcaactaaaatagaatttgctttattatgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatattagtgaagcaca 1131769  T
Q  437 ttat 440  Q
    ||||    
T  1131768 ttat 1131765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 158 - 330
Target Start/End: Complemental strand, 22524988 - 22524816
Alignment:
Q  158 atgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattca 257  Q
    |||||| | |||| |||||| || ||||||||||||||||||| |||||| |||| |||||| | |  || | ||||||  |||| ||  |||  |||||    
T  22524988 atgatcatgaatgtgtctcacatcggtttcatgatcatgaatgtgtctcatataaatttgcaatgttgaagtcaattttacaatcttttcaatcaattca 22524889  T
Q  258 cgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaattt 330  Q
     |||||||| ||| || ||||| |||||||||| ||||||| |||||| ||||||||||||||| ||| ||||    
T  22524888 agaaagttgtcatcacaataatgatataatttatttttttggaaccttaaaaagacaagattaagattcattt 22524816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 449
Target Start/End: Complemental strand, 15060255 - 15060148
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    ||||| || ||||||| |||| |||| ||||| ||||||||| |||||||||||||||||||||||| | |||||||||||||  ||||  |||||||||    
T  15060255 atttttaactaaaatagaatttgttttgttatgaaaattatctcaatttcttggataataaatatcatcgatatttttaatatcagtgagacacattatt 15060156  T
Q  442 aggaacaa 449  Q
    | ||||||    
T  15060155 atgaacaa 15060148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 449
Target Start/End: Original strand, 22012131 - 22012238
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||| ||||||||| |||||||||||||||||||||||  | ||||||||||||||  |||| ||||| |||    
T  22012131 attttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatatcgtcgatatttttaatattaatgaagcacataatt 22012230  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  22012231 aggaacaa 22012238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 449
Target Start/End: Complemental strand, 34043633 - 34043526
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||| ||||||||||| |||||||||||||||||||||  | ||||||||||||||  ||||  ||||||||    
T  34043633 attttcaactaaaatagaatttgctttgttatgaaaattatccccatttcttggataataaatatcgtcgatatttttaatattaatgaagaacattatt 34043534  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  34043533 aggaacaa 34043526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 375 - 449
Target Start/End: Complemental strand, 20990493 - 20990419
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||| |||||||||||||||||||||||  | |||||||||||||| ||||| |||||||||| ||||||    
T  20990493 aaaattatctcaatttcttggataataaatatcgtcgatatttttaatattagtgaagcacattattaagaacaa 20990419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 375 - 449
Target Start/End: Complemental strand, 1603426 - 1603352
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||||  |||||||||||||||||||||  | ||||||||||||||  |||| |||||||||||||||||    
T  1603426 aaaattatcctcatttcttggataataaatatcgtcgatatttttaatattaatgaagcacattattaggaacaa 1603352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 451
Target Start/End: Original strand, 4065601 - 4065711
Alignment:
Q  342 cattttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattat 440  Q
    ||||||||| |||||||| ||| |||| ||||| || | | | ||||||||||||||||||||||||| |||||||||||  ||| ||||| || |||||    
T  4065601 cattttcaactaaaatatcatttgttttgttatgaagagtcttccaatttcttggataataaatatcaccaatatttttataattagtgaagcaaattat 4065700  T
Q  441 taggaacaagg 451  Q
    || ||||||||    
T  4065701 tatgaacaagg 4065711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 407
Target Start/End: Complemental strand, 21442726 - 21442661
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatc 407  Q
    |||||||| ||||||| |||| | || ||||| |||||||||||||||||||||||||||||||||    
T  21442726 attttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataataaatatc 21442661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 375 - 430
Target Start/End: Original strand, 26212911 - 26212966
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtga 430  Q
    ||||||||||  |||||||||||||||||||||| | |||||||||||||| ||||    
T  26212911 aaaattatcctgatttcttggataataaatatcatcgatatttttaatattagtga 26212966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 95
Target Start/End: Original strand, 15603786 - 15603824
Alignment:
Q  57 cacctaagaataataacaccaaaaaagtttacattacta 95  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  15603786 cacctaagaataataacaccaaaaaactttacattacta 15603824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 1831273 - 1831209
Alignment:
Q  20 agagaacaataatatctgtgaagtagactgcaattt--acacctaagaataataacaccaaaaaa 82  Q
    |||||||||||| ||||| ||||||||||| |||||   || |||||||||||||||||||||||    
T  1831273 agagaacaataacatctgcgaagtagactgaaattttagcatctaagaataataacaccaaaaaa 1831209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 451
Target Start/End: Original strand, 4090808 - 4090916
Alignment:
Q  344 ttttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatta 442  Q
    ||||||| ||||||||  || |||| ||||| || ||| || |||||||||||||||||||||| | |||||||||||  ||| ||||  ||||||||||    
T  4090808 ttttcaactaaaatatcgtttgttttgttatgaagattctcgcaatttcttggataataaatattatcaatatttttataatttgtgagacacattatta 4090907  T
Q  443 ggaacaagg 451  Q
     ||| ||||    
T  4090908 agaataagg 4090916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 449
Target Start/End: Complemental strand, 12269487 - 12269381
Alignment:
Q  343 attttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    ||||| || |||||||||||| |||| ||| | || ||| ||| ||||| || ||||||||||||||  ||||||||||||||| || |  |||||||||    
T  12269487 atttttaactaaaatataatttgttttgttgtgaagattctcctaattttttagataataaatatcaa-aatatttttaatattagtaagacacattatt 12269389  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  12269388 aggaacaa 12269381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 408
Target Start/End: Complemental strand, 22524782 - 22524749
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatca 408  Q
    ||||| ||||||||||||||||||||||||||||    
T  22524782 aaaatcatcccaatttcttggataataaatatca 22524749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 56 - 84
Target Start/End: Original strand, 11680480 - 11680508
Alignment:
Q  56 acacctaagaataataacaccaaaaaagt 84  Q
    |||||||||||||||||||||||||||||    
T  11680480 acacctaagaataataacaccaaaaaagt 11680508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 86; Significance: 7e-41; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 154 - 449
Target Start/End: Complemental strand, 1592 - 1295
Alignment:
Q  154 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 253  Q
    ||||||||||| |||||||||||| || ||||| || || |||||| |||||| ||| || ||||||||| ||| | || | || ||||| |  |||  |    
T  1592 ccacatgatcccaaatgcgtctcacatcggttttataattatgaatacgtctcgcatgatcttgcattattaaagtcaaatatgcaatccattgaatcaa 1493  T
Q  254 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagt 352  Q
    |||| |||| |||||||||| ||| | |||||||||| | ||||| || |||| |||||| ||||||| ||||| || ||||  |||| ||||||||| |    
T  1492 ttcaagaaatttgacattacaatattgatataatttattattttggaatctttgaaagactagattaagattaagttttctagtaggctcattttcaact 1393  T
Q  353 aaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||||| |||| |||| ||||| ||||| ||| |||||| |||||||||||||||||  ||||||||||||||| ||||  |||||||||||||||||    
T  1392 aaaatagaatttgttttgttatgaaaataatctcaatttattggataataaatatcacaaatatttttaatattagtgaggcacattattaggaacaa 1295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 215 - 449
Target Start/End: Complemental strand, 25336 - 25100
Alignment:
Q  215 ttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagaca 314  Q
    |||| |||||||||| |||| || |||||||  |||   |||| ||||||||||||||  ||| | |||||||||| |||| || ||||||| |||||||    
T  25336 ttgctttatcaaattcaattatgcaatcctttcaatcatttcaagaaagttgacattaatatattgatataatttatttttatggaacctttgaaagaca 25237  T
Q  315 agattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttataaa-attatcccaatttcttggataataaatatcagcaa 412  Q
    ||||||  ||||| |||||||| | ||| |||||||| |||||| ||||| | || || || || |||||| |||||||||||||||||||||||| |||    
T  25236 agattaggattaacttctctaatatgccaattttcaactaaaatttaatttggtttgtcatgaatattatctcaatttcttggataataaatatcaccaa 25137  T
Q  413 tatttttaatattcgtgaatcacattattaggaacaa 449  Q
    ||||||||||||| ||||  |||||||||||||||||    
T  25136 tatttttaatattagtgagacacattattaggaacaa 25100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 287 - 449
Target Start/End: Original strand, 2387 - 2551
Alignment:
Q  287 tttaattttttgaaacctttaaaagacaagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttata-aaattatcc 384  Q
    |||| ||||||| || |||| |||||||||||||| |||||||||| ||| |||  ||||||||| |||||||||||| |||| |||||  ||||||||     
T  2387 tttatttttttggaaactttgaaagacaagattaagattaatttctataataggttcattttcaactaaaatataatttgttttgttatgcaaattatct 2486  T
Q  385 caatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
    |||||| ||| |||||||||||||  ||||||||||||||| ||||| |||||||||||||||||    
T  2487 caatttattgaataataaatatcactaatatttttaatattagtgaaacacattattaggaacaa 2551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 169 - 449
Target Start/End: Complemental strand, 41076 - 40798
Alignment:
Q  169 tgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgac 268  Q
    ||||||||| || |||||||| || || |||||||||  | | || ||||| ||||||||| ||||||| ||| |||  ||   ||||| |||| |||||    
T  41076 tgcgtctcacatcggtttcattattataaatgcgtcttgcttgatcttgcaatatcaaattcaattttgcaatgctttcaaccaattcaagaaatttgac 40977  T
Q  269 attaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctctaaaggcccattttcaagtaaaatataattagttt 368  Q
    ||||| ||| | |||||||||| | ||||  |||| |  |||||||||||||| ||||||||   |  || | ||||||||| |||||||||||| ||||    
T  40976 attacaatattgatataatttagtattttttaaccatagaaagacaagattaagattaattt---tgtagcctcattttcaactaaaatataatttgttt 40880  T
Q  369 ggttata-aaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattaggaacaa 449  Q
     |||||  |||||||  ||||||||||||||||||||||||  ||||||||||||||| || |  |||||||||||||||||    
T  40879 tgttatgtaaattatttcaatttcttggataataaatatcacaaatatttttaatattagttaggcacattattaggaacaa 40798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 154 - 402
Target Start/End: Original strand, 98176 - 98425
Alignment:
Q  154 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 253  Q
    ||||||||||| |||||||||||| || |||||||| || ||||||| | ||| ||| || ||||||||||||||| || |||| |||||||   ||  |    
T  98176 ccacatgatcccaaatgcgtctcacatcggtttcataattatgaatgtg-ctcgcatgatcttgcattatcaaattcaaatttgcaatcctttcgatcaa 98274  T
Q  254 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagacaagattaaaattaatttctcta-aaggcccattttcaagt 352  Q
    |||| |||| |||||||||  ||| | |||||||||| ||||||| || |||| |||||||||||||| |||||||||||||  | || ||||||||| |    
T  98275 ttcaagaaatttgacattaatatattgatataatttatttttttggaatctttgaaagacaagattaagattaatttctctagcatgctcattttcaact 98374  T
Q  353 aaaatataattagtttggttat-aaaattatcccaatttcttggataataa 402  Q
    |||||| ||||  |||  |||| ||||| ||| |||||||||| |||||||    
T  98375 aaaatagaatttattttattatgaaaataatctcaatttcttgaataataa 98425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 119420 - 119471
Alignment:
Q  400 taaatatcagcaatatttttaatattcgtgaatcacattattaggaacaagg 451  Q
    ||||||||| |||||||||||||||| | ||  |||||||||||||||||||    
T  119420 taaatatcaccaatatttttaatattagcgaggcacattattaggaacaagg 119471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1364 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold1364
Description:

Target: scaffold1364; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 154 - 402
Target Start/End: Complemental strand, 1127 - 873
Alignment:
Q  154 ccacatgatcctaaatgcgtctcaaattggtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataattta 253  Q
    ||||||||||| ||||||||| || || |||||||| || ||||||||||||| ||| || ||| ||||||||||| || |||| |||| ||  |||  |    
T  1127 ccacatgatcccaaatgcgtcccacatcggtttcataattatgaatgcgtctcgcatgatcttgtattatcaaattcaaatttgcaatcatttcaatcaa 1028  T
Q  254 ttcacgaaagttgacattaccataattatataatttaattttttgaaacctttaaaagac----aagattaaaattaatttctc-taaaggcccattttc 348  Q
    |||| |||| |||||||||| ||| | |||||||||| ||||||| || |||| ||||||     | ||||| |||||||||||    |||| |||||||    
T  1027 ttcaagaaatttgacattactatattgatataatttatttttttggaatctttgaaagactatatatattaagattaatttctcaggtaggctcattttc 928  T
Q  349 aagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataa 402  Q
    || ||||||| |||| |||| ||||| ||||| ||| |||||||| |||||||||    
T  927 aactaaaatagaatttgttttgttatgaaaataatctcaatttctaggataataa 873  T

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Target: scaffold0743 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 313 - 449
Target Start/End: Original strand, 3287 - 3425
Alignment:
Q  313 caagattaaaattaatttctctaa-aggcccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagc 410  Q
    |||||||||  ||||||||||||  ||||| |||||||| |||||||||||| |||| ||||| |||||| ||||||||| || ||||||||||||||      
T  3287 caagattaagtttaatttctctagtaggccaattttcaactaaaatataatttgttttgttatgaaaattctcccaattttttagataataaatatcaca 3386  T
Q  411 aatatttttaatattcgtgaatcacattattaggaacaa 449  Q
     |||||||||||||| || |  || ||||||||||||||    
T  3387 tatatttttaatattagtaagacatattattaggaacaa 3425  T

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Target: scaffold0016 (Bit Score: 51; Significance: 6e-20; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 340 - 449
Target Start/End: Original strand, 87645 - 87755
Alignment:
Q  340 cccattttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacatt 438  Q
    ||||||||||| ||||||| |||| | || ||||| ||||||||| ||||||||||||||||||||||   | |||||||||||||| |||||  |||||    
T  87645 cccattttcaactaaaatagaatttgcttcgttatgaaaattatctcaatttcttggataataaatattgtcgatatttttaatattagtgaagtacatt 87744  T
Q  439 attaggaacaa 449  Q
    |||||||||||    
T  87745 attaggaacaa 87755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 449
Target Start/End: Original strand, 88122 - 88229
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||| ||||||||| ||||||||||||||||||||||   | |||||||||||||| |||||  ||||||||    
T  88122 attttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatattgtcgatatttttaatattagtgaagtacattatt 88221  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  88222 aggaacaa 88229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 449
Target Start/End: Original strand, 88598 - 88705
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||| ||||||||| ||||||||||||||||||||||   | |||||||||||||| |||||  ||||||||    
T  88598 attttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatattgtcgatatttttaatattagtgaagtacattatt 88697  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  88698 aggaacaa 88705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 449
Target Start/End: Original strand, 89074 - 89181
Alignment:
Q  343 attttcaagtaaaatataattagtttggttat-aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattatt 441  Q
    |||||||| ||||||| |||| | || ||||| ||||||||| ||||||||||||||||||||||   | |||||||||||||| |||||  ||||||||    
T  89074 attttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatattgtcgatatttttaatattagtgaagtacattatt 89173  T
Q  442 aggaacaa 449  Q
    ||||||||    
T  89174 aggaacaa 89181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 375 - 445
Target Start/End: Complemental strand, 50984 - 50914
Alignment:
Q  375 aaaattatcccaatttcttggataataaatatcagcaatatttttaatattcgtgaatcacattattagga 445  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||   ||||  ||||||||||||    
T  50984 aaaattatcccaatttcttggataataaatatcgtcgatatttttaatatcaatgaagtacattattagga 50914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 297
Target Start/End: Original strand, 21299 - 21402
Alignment:
Q  194 atgaatgcgtctcacataattttgcattatcaaatttaattttgtaatccttataatttattcacgaaagttgacattaccataattatataatttaatt 293  Q
    ||||||||||||| ||| || ||||||||||||||| |||| |  ||| |||  |||  ||||| ||||||| ||||||  ||| | |||||||||||||    
T  21299 atgaatgcgtctcgcatgatcttgcattatcaaattcaattattcaattctttcaatcaattcaagaaagttcacattaatatattgatataatttaatt 21398  T
Q  294 tttt 297  Q
    ||||    
T  21399 tttt 21402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 10171 - 10224
Alignment:
Q  183 gtttcatgatcatgaatgcgtctcacataattttgcattatcaaatttaatttt 236  Q
    |||| |||||| | |||||||||||||| || ||||||||||||||| ||||||    
T  10171 gttttatgatcctaaatgcgtctcacatgatcttgcattatcaaattcaatttt 10224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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