View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14258_low_14 (Length: 449)
Name: NF14258_low_14
Description: NF14258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14258_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 386; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 1 - 433
Target Start/End: Original strand, 9104714 - 9105152
Alignment:
| Q |
1 |
ttctaggtcatatgtgtgatgtggaagcacgagaaagaaataaagtaaggttatgcacttgtgctagccagagatgttgccttccctaaatcttatttga |
100 |
Q |
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| T |
9104714 |
ttctaggtcatatgtgtgatgtggaagcacgagaaagaaataaagtaaggttatgcacttatgctagccagagatgttgccttccctaaatcttatttga |
9104813 |
T |
|
| Q |
101 |
atatatgactgggtatatgtgttaagtctatttccaatataaaccgtcaaaatgtagggcttgatttcaatcttagaggagacaaaattatacaaaatgt |
200 |
Q |
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| T |
9104814 |
atatatgactgggtatatgtgttaagtctatttccaatataaaccgacaaaatgtagggcttgatttcaatcttagaggagacaaaattatacaaaatgt |
9104913 |
T |
|
| Q |
201 |
ctacaattgatttagataggtttaga-ttttttgagtggaattattactactatcaataataagttggtctgtg-aacaaatttagatttcttaagtaag |
298 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||||||| |
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| T |
9104914 |
ctacaattgatttagataggtttagatttttttgagtggaattattactactatcaataatgagttggtctgtgaaacaaattgaaatttcttaagtaag |
9105013 |
T |
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| Q |
299 |
tagtcagaagtttgatatctgatttttgtataaggagaaaatttaattgaaggaggaaattagtcaacattgaaaggttagatgtttgatctctcacttt |
398 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9105014 |
tagtcagaagtttgatatctgatttttgtataaggagaaaatttaattgaaggaggaaattagtcaacattgaaaggttagatgtttgatctctcacttt |
9105113 |
T |
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| Q |
399 |
aacttgagatc----agactagttgtccatgcaagtttg |
433 |
Q |
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| T |
9105114 |
aacttgagatcagatagactagttgtccatgcaagtttg |
9105152 |
T |
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