View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14258_low_25 (Length: 309)
Name: NF14258_low_25
Description: NF14258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14258_low_25 |
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Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 299
Target Start/End: Original strand, 21164466 - 21164748
Alignment:
| Q |
18 |
attattgcatacaacttcaatttctatctcccttgcttcggacatgaaaacagcttcaatttgtgtcaccaaatttgactagaatattttatgttgttca |
117 |
Q |
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| T |
21164466 |
attattgcatacaacttcaatttctatctcccttgcttcggacatgaaaacagcttcaatttgtgtcaccaaatttgactagaatattttatgttgttca |
21164565 |
T |
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| Q |
118 |
tgcatctaagaacagaaacaagggaaggaaagaaaagaaacgtttataaaacaatgatattttc-ttttttggtacgaaacaatgacgttttc-ttaata |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |
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| T |
21164566 |
tgcatctaagaacagaaacaagggaaggaaagaaaagaaacgtttataaaacaatgatattttctttttttggtacgaaacaatgacgttttctttaata |
21164665 |
T |
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| Q |
216 |
aacgttgannnnnnnnnnnnnnngtgtctgaaaaatagtgacattttatatttagtctctatataattaaatttcataagtata |
299 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21164666 |
aacgttga-ttttttttatttttgtgtctgaaaaatagtgacattttatatttagtctctatataattaaatttcataagtata |
21164748 |
T |
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