View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14258_low_31 (Length: 274)
Name: NF14258_low_31
Description: NF14258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14258_low_31 |
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Alignment Details
Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 14 - 243
Target Start/End: Complemental strand, 1320580 - 1320351
Alignment:
| Q |
14 |
agagaatataaacacaaattccaaaacaacaaaagagtgagaaataaacacaaattataaatacatttttgagaggaattatcaatatattttaatctta |
113 |
Q |
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| T |
1320580 |
agagaatataaacacaaattccaaaacaacaaaagagtgagaaataaacacaaattataaatacatttttgagaggaattatcaatatattttaatctta |
1320481 |
T |
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| Q |
114 |
aaaacttattaaggtcgtgcttgtttgctatctttacaagcagagtttagatatgctcatgtggacaggagcagatccaaactcttacaagtgtgacctt |
213 |
Q |
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| T |
1320480 |
aaaacttattaaggtcgcgcttgtttgctatctttacatgcagagtttagatatgctcatgtggactggagcggatccaaactcttacaagtgtgacctt |
1320381 |
T |
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| Q |
214 |
attaaatagacgaaattaaatcctttactt |
243 |
Q |
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| T |
1320380 |
attaaatagacgaaattaaatcctttactt |
1320351 |
T |
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