View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14258_low_8 (Length: 547)

Name: NF14258_low_8
Description: NF14258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14258_low_8
NF14258_low_8
[»] chr1 (22 HSPs)
chr1 (62-216)||(9636290-9636444)
chr1 (214-284)||(9636465-9636535)
chr1 (60-187)||(52754630-52754757)
chr1 (112-187)||(44196192-44196267)
chr1 (226-280)||(22785737-22785791)
chr1 (214-284)||(32380286-32380356)
chr1 (320-365)||(9636571-9636616)
chr1 (214-283)||(30559744-30559813)
chr1 (72-187)||(6078699-6078814)
chr1 (1-43)||(9636245-9636287)
chr1 (59-157)||(49466009-49466107)
chr1 (113-181)||(48607493-48607561)
chr1 (113-187)||(29639944-29640018)
chr1 (215-280)||(44196337-44196403)
chr1 (214-284)||(48607355-48607424)
chr1 (214-279)||(6078570-6078634)
chr1 (214-279)||(29639815-29639879)
chr1 (214-279)||(49868120-49868184)
chr1 (88-187)||(30054159-30054258)
chr1 (72-114)||(29640006-29640048)
chr1 (320-365)||(32380205-32380250)
chr1 (114-187)||(32380421-32380494)
[»] chr4 (14 HSPs)
chr4 (434-530)||(31812599-31812695)
chr4 (59-187)||(53693651-53693780)
chr4 (215-280)||(45586487-45586552)
chr4 (59-172)||(10985297-10985410)
chr4 (214-284)||(21403043-21403113)
chr4 (214-283)||(9578310-9578379)
chr4 (215-284)||(17358824-17358893)
chr4 (226-282)||(10985149-10985205)
chr4 (214-283)||(31943584-31943655)
chr4 (214-284)||(53693520-53693590)
chr4 (214-283)||(3074112-3074180)
chr4 (59-113)||(9578129-9578183)
chr4 (246-284)||(29528617-29528655)
chr4 (113-181)||(9578172-9578240)
[»] chr8 (13 HSPs)
chr8 (61-185)||(8882633-8882757)
chr8 (72-187)||(41504644-41504759)
chr8 (214-284)||(41504824-41504894)
chr8 (113-179)||(9255643-9255709)
chr8 (214-283)||(13153108-13153177)
chr8 (84-179)||(6623545-6623640)
chr8 (214-284)||(24592392-24592463)
chr8 (60-114)||(10869689-10869743)
chr8 (226-283)||(22729449-22729506)
chr8 (227-284)||(23448603-23448660)
chr8 (435-468)||(28282526-28282559)
chr8 (227-284)||(40146461-40146518)
chr8 (139-187)||(10869757-10869805)
[»] chr5 (18 HSPs)
chr5 (72-187)||(19576269-19576384)
chr5 (214-280)||(19576449-19576515)
chr5 (214-284)||(27169534-27169604)
chr5 (214-280)||(39021543-39021609)
chr5 (59-187)||(3052580-3052708)
chr5 (214-284)||(4785175-4785245)
chr5 (77-187)||(39021673-39021782)
chr5 (75-158)||(4785017-4785100)
chr5 (108-179)||(8911488-8911559)
chr5 (226-284)||(40813212-40813270)
chr5 (226-279)||(15731342-15731395)
chr5 (72-129)||(15736989-15737046)
chr5 (214-283)||(22713748-22713817)
chr5 (226-283)||(23244892-23244949)
chr5 (72-145)||(27169701-27169774)
chr5 (214-280)||(8911632-8911698)
chr5 (131-180)||(15731478-15731527)
chr5 (81-180)||(13760235-13760334)
[»] chr2 (10 HSPs)
chr2 (71-187)||(27925843-27925959)
chr2 (72-183)||(31410542-31410653)
chr2 (214-284)||(31410403-31410473)
chr2 (63-187)||(30546879-30547002)
chr2 (216-284)||(30547068-30547136)
chr2 (84-183)||(31162219-31162318)
chr2 (214-284)||(27925709-27925779)
chr2 (214-284)||(31708831-31708900)
chr2 (215-284)||(34318492-34318561)
chr2 (443-475)||(12539195-12539227)
[»] chr7 (14 HSPs)
chr7 (74-185)||(38761567-38761678)
chr7 (59-172)||(43727201-43727314)
chr7 (59-187)||(9225709-9225837)
chr7 (59-187)||(26787093-26787221)
chr7 (74-180)||(6113186-6113292)
chr7 (214-284)||(24276728-24276798)
chr7 (60-180)||(24276870-24276990)
chr7 (72-187)||(29953082-29953197)
chr7 (84-187)||(43216993-43217096)
chr7 (214-276)||(29952956-29953017)
chr7 (214-284)||(31035913-31035982)
chr7 (72-129)||(28042055-28042112)
chr7 (226-277)||(6113374-6113425)
chr7 (60-113)||(25252921-25252974)
[»] chr6 (10 HSPs)
chr6 (62-187)||(30620707-30620833)
chr6 (215-282)||(12648849-12648916)
chr6 (214-284)||(7990327-7990398)
chr6 (226-284)||(30620911-30620969)
chr6 (113-187)||(2226358-2226432)
chr6 (219-280)||(23302876-23302936)
chr6 (119-187)||(7990464-7990532)
chr6 (220-284)||(12181261-12181325)
chr6 (120-187)||(12648717-12648784)
chr6 (214-280)||(2226497-2226563)
[»] chr3 (26 HSPs)
chr3 (214-284)||(9740959-9741029)
chr3 (61-183)||(46986534-46986656)
chr3 (214-280)||(16415967-16416033)
chr3 (214-280)||(18516941-18517007)
chr3 (214-280)||(33776700-33776765)
chr3 (214-280)||(46986726-46986792)
chr3 (215-284)||(55194398-55194466)
chr3 (72-187)||(47041146-47041261)
chr3 (113-187)||(30381831-30381905)
chr3 (214-284)||(46279309-46279379)
chr3 (113-183)||(53682139-53682209)
chr3 (214-278)||(20844612-20844676)
chr3 (214-261)||(15667380-15667427)
chr3 (214-280)||(47041326-47041393)
chr3 (226-284)||(3858823-3858880)
chr3 (75-129)||(16312020-16312074)
chr3 (75-129)||(18488804-18488858)
chr3 (75-129)||(18493014-18493068)
chr3 (214-284)||(24130468-24130538)
chr3 (113-187)||(33776561-33776635)
chr3 (214-284)||(47472747-47472821)
chr3 (214-279)||(53682278-53682342)
chr3 (113-185)||(46279446-46279518)
chr3 (113-187)||(16415828-16415902)
chr3 (113-187)||(18516802-18516876)
chr3 (215-280)||(30381972-30382036)
[»] scaffold0178 (2 HSPs)
scaffold0178 (215-284)||(17112-17181)
scaffold0178 (120-179)||(16980-17039)
[»] scaffold0470 (1 HSPs)
scaffold0470 (84-179)||(12969-13064)
[»] scaffold0002 (1 HSPs)
scaffold0002 (231-281)||(435688-435738)
[»] scaffold0726 (1 HSPs)
scaffold0726 (320-365)||(630-675)


Alignment Details
Target: chr1 (Bit Score: 99; Significance: 1e-48; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 62 - 216
Target Start/End: Original strand, 9636290 - 9636444
Alignment:
Q  62 ggcacacgttcgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggag 161  Q
    |||||| || |||||||||||||||||||||||||||||||| || ||||||| |||||| |||||||||  |||||| ||||| | ||||||||||| |    
T  9636290 ggcacatgtccgggctcaacctatactttctttgtataactataagaaatttataaaaaaattgacttacgataacagtcaaaatttgtcactatagggg 9636389  T
Q  162 aaatttccgtagctaaatctgtctgttgtcattagatgtttgccacatttaccta 216  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  9636390 aaatttccgtagctaaatctgtctgttgtcattagatgtttttcacatttaccta 9636444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 9636465 - 9636535
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9636465 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 9636535  T

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Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 52754757 - 52754630
Alignment:
Q  60 tgggcacacgttcgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactatagg 159  Q
    |||||| ||| |||||||||||| |||||||||||||||  |||||| |||||| ||| |||||||||||| ||| | ||||| ||  ||||||||||||    
T  52754757 tgggcatacgctcgggctcaaccgatactttctttgtatcgctacaagaaatttgcaagaaatttgacttatagtgatagccagaatccgtcactatagg 52754658  T
Q  160 agaaatttccgtagctaaatctgtctgt 187  Q
      ||||||| ||||||||||||||||||    
T  52754657 gcaaatttctgtagctaaatctgtctgt 52754630  T

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Target: chr1; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 112 - 187
Target Start/End: Original strand, 44196192 - 44196267
Alignment:
Q  112 ttacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaatctgtctgt 187  Q
    |||||| |||||||||||  ||| ||||||||||  ||||||||||||  ||||||||||||||||||||||||||    
T  44196192 ttacaagaaatttgacttttagtgacagccaaaatccgtcactatagggcaaatttccgtagctaaatctgtctgt 44196267  T

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Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 226 - 280
Target Start/End: Complemental strand, 22785791 - 22785737
Alignment:
Q  226 ttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatc 280  Q
    ||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||    
T  22785791 ttttaaaaatattatggacctctacctacggttgcgactgtcactaaaacttatc 22785737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 32380356 - 32380286
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    ||||||||||| |||||||||||| |||||| | ||||||||||| || |||| |||||||||||||||||    
T  32380356 ctaaggagaccattttaaaaacataatggacctttacctacggttacggctgtcactaaaacttatcattg 32380286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 320 - 365
Target Start/End: Original strand, 9636571 - 9636616
Alignment:
Q  320 aaattctgaaaatgaagaagtcataaaattacaactaaaattagtt 365  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  9636571 aaattctgaaaatgaataagtcataaaattacaactaaaattagtt 9636616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 30559813 - 30559744
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcatt 283  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||| | ||||| ||||||| ||||||||    
T  30559813 ctaaggagaccattttaaaaacattatggacctctacctacagtttcaactgtcactaaaatttatcatt 30559744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 187
Target Start/End: Complemental strand, 6078814 - 6078699
Alignment:
Q  72 cgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgt 171  Q
    ||||||||||   |||||||||| |||  ||| || |||||||||| |||||||| ||  ||| || |||||||   |||||||||||  ||||||||||    
T  6078814 cgggctcaactcgtactttctttttatcgctataagaaatttacaagaaatttgatttttagtgacggccaaaatctgtcactatagggcaaatttccgt 6078715  T
Q  172 agctaaatctgtctgt 187  Q
    ||||||||||||||||    
T  6078714 agctaaatctgtctgt 6078699  T

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Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9636245 - 9636287
Alignment:
Q  1 caaagtacttttttgggtttatatgcttgggcttagccattca 43  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  9636245 caaagtacttttttgggtttatatgcttgggcttaaccattca 9636287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 49466107 - 49466009
Alignment:
Q  59 ctgggcacacgttcgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactata 157  Q
    |||||||||||  || |||||||| |||||||||||||||  || ||| |||||| ||| |||||||||||| ||| ||| |||||| || ||||||||    
T  49466107 ctgggcacacgcccgagctcaaccgatactttctttgtatcgctgcaagaaatttgcaagaaatttgacttatagtgacaaccaaaattcatcactata 49466009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 48607561 - 48607493
Alignment:
Q  113 tacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaatct 181  Q
    ||||| |||||||||||  ||||||||||||||  ||||||||||||| ||| || |||||||||||||    
T  48607561 tacaataaatttgacttgtagtaacagccaaaatccgtcactataggaaaaaatttcgtagctaaatct 48607493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 187
Target Start/End: Complemental strand, 29640018 - 29639944
Alignment:
Q  113 tacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaatctgtctgt 187  Q
    |||||||||||| ||||  ||| || |||||||  ||||||||||| | |||||| |||||||||||||||||||    
T  29640018 tacaaaaaatttaacttttagtgacggccaaaatccgtcactatagaacaaattttcgtagctaaatctgtctgt 29639944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 280
Target Start/End: Original strand, 44196337 - 44196403
Alignment:
Q  215 taaggagaccgttttaaaaacattatggacttct-acctacggttgcgactgttactaaaacttatc 280  Q
    |||||||||| ||||||||||||||||||| ||| ||||||| || || |||| |||||||||||||    
T  44196337 taaggagaccattttaaaaacattatggacctctaacctacgatttcggctgtgactaaaacttatc 44196403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 48607424 - 48607355
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    ||||||||||| ||||||| ||||||||| |||||||||||||||| |  ||| ||||||| |||||||||    
T  48607424 ctaaggagaccattttaaatacattatgg-cttctacctacggttgtggttgtcactaaaatttatcattg 48607355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 279
Target Start/End: Complemental strand, 6078634 - 6078570
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttat 279  Q
    ||||||||||| ||||||||||||||| ||| ||||||||| |||||| |||| |||| |||||||    
T  6078634 ctaaggagaccattttaaaaacattat-gacctctacctacagttgcggctgtcactataacttat 6078570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 279
Target Start/End: Complemental strand, 29639879 - 29639815
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttat 279  Q
    ||||| ||||| |||||||||||||||| || ||||||||| |||||| |||| ||||||||||||    
T  29639879 ctaagtagaccattttaaaaacattatg-acctctacctacagttgcggctgtcactaaaacttat 29639815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 279
Target Start/End: Complemental strand, 49868184 - 49868120
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttat 279  Q
    ||||||||||| ||||||||| |||||| || ||||||||| |||||| |||| ||||||||||||    
T  49868184 ctaaggagaccattttaaaaatattatg-acctctacctaccgttgcggctgtcactaaaacttat 49868120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 187
Target Start/End: Original strand, 30054159 - 30054258
Alignment:
Q  88 tttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggag-aaatttccgtagctaaatctgtctg 186  Q
    ||||||||||| |||||||||||  | ||| |||||||||||  ||| ||  |||||| | |||||||| |||| |||||||||||| ||||||||||||    
T  30054159 tttctttgtatcactacaaaaaaaattcaagaaatttgacttgtagttacgaccaaaatttgtcactat-ggagtaaatttccgtagttaaatctgtctg 30054257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 72 - 114
Target Start/End: Complemental strand, 29640048 - 29640006
Alignment:
Q  72 cgggctcaacctatactttctttgtataactacaaaaaattta 114  Q
    ||||||||||| |||||||||||||||  ||||||||||||||    
T  29640048 cgggctcaacccatactttctttgtatcgctacaaaaaattta 29640006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 365
Target Start/End: Complemental strand, 32380250 - 32380205
Alignment:
Q  320 aaattctgaaaatgaagaagtcataaaattacaactaaaattagtt 365  Q
    ||||||| |||||||| || |||||||||||| |||||||||||||    
T  32380250 aaattctaaaaatgaataattcataaaattaccactaaaattagtt 32380205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 187
Target Start/End: Complemental strand, 32380494 - 32380421
Alignment:
Q  114 acaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaatctgtctgt 187  Q
    |||| ||| |||||||  ||| |||||||||  ||||||||||| || ||||||| |||||||||| |||||||    
T  32380494 acaagaaaattgacttttagtgacagccaaatttcgtcactatatgacaaatttctgtagctaaatttgtctgt 32380421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 1e-42; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 434 - 530
Target Start/End: Original strand, 31812599 - 31812695
Alignment:
Q  434 tttagaataaattctcctcaactatgaactattatactattcccctcgttgtttcgcattttagagaaaagaaaagatatagatgtaatatagaacg 530  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31812599 tttagaataaattctcctcaacaatgaactattatactattcccctcgttatttcgcattttagagaaaagaaaagatatagatgtaatatagaacg 31812695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 53693780 - 53693651
Alignment:
Q  59 ctgggcacacgttcgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatc-gtcactata 157  Q
    |||||||||||| || |||||||| |||||||||||||||  ||||||  ||||| ||| |||||||||||| ||| ||| ||||||||| |||||||||    
T  53693780 ctgggcacacgtccgagctcaaccgatactttctttgtatcgctacaagcaatttgcaagaaatttgacttatagtgacaaccaaaaatctgtcactata 53693681  T
Q  158 ggagaaatttccgtagctaaatctgtctgt 187  Q
    ||| ||||||||||||||||||||||||||    
T  53693680 ggacaaatttccgtagctaaatctgtctgt 53693651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 280
Target Start/End: Complemental strand, 45586552 - 45586487
Alignment:
Q  215 taaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatc 280  Q
    |||||||||| ||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  45586552 taaggagaccattttaaaaacattatggacctctacatacggttgcgactgtcactaaaacttatc 45586487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 10985410 - 10985297
Alignment:
Q  59 ctgggcacacgttcgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactatag 158  Q
    ||||||||| ||  |||||||||| ||||||| ||||||| ||| ||| |||||||||| |||||||||||  ||| | ||||||||  |||| ||||||    
T  10985410 ctgggcacatgtcggggctcaacccatactttttttgtatcactgcaacaaatttacaagaaatttgacttttagtgatagccaaaatccgtcgctatag 10985311  T
Q  159 gagaaatttccgta 172  Q
    |  |||||||||||    
T  10985310 ggaaaatttccgta 10985297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 21403043 - 21403113
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    ||||||||||| ||||||||||||||||| | |||||||| | |||||  ||| |||||||||||||||||    
T  21403043 ctaaggagaccattttaaaaacattatggtcctctacctatgattgcggatgtcactaaaacttatcattg 21403113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 9578310 - 9578379
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcatt 283  Q
    |||| |||||| ||||||||||  |||| |||||||| |||||||||| |||| ||||||||||||||||    
T  9578310 ctaaagagaccattttaaaaactctatgaacttctacttacggttgcggctgtcactaaaacttatcatt 9578379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 17358824 - 17358893
Alignment:
Q  215 taaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    |||||||||| ||||||||||||||||||| |||||||||| ||| |  ||| |||||||||||| ||||    
T  17358824 taaggagaccattttaaaaacattatggacctctacctacgattgtggttgtcactaaaacttatgattg 17358893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 282
Target Start/End: Complemental strand, 10985205 - 10985149
Alignment:
Q  226 ttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcat 282  Q
    ||||| ||||||||||||| ||||||||||||||| |||||  ||||||||||||||    
T  10985205 ttttataaacattatggacctctacctacggttgcaactgtctctaaaacttatcat 10985149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 31943584 - 31943655
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacc--tacggttgcgactgttactaaaacttatcatt 283  Q
    ||||| ||||| ||||||||||||||||||| ||||||  |||||||||| |||| | |||||| |||||||    
T  31943584 ctaagaagaccattttaaaaacattatggacctctacctatacggttgcggctgtcattaaaacatatcatt 31943655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 53693590 - 53693520
Alignment:
Q  214 ctaaggagaccgttttaaaa-acattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    ||||||||||| |||||||| |||||| |||| |||||||||||||  | |||| |||||||||||||||||    
T  53693590 ctaaggagaccattttaaaatacattacggacctctacctacggtttgg-ctgtcactaaaacttatcattg 53693520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 3074112 - 3074180
Alignment:
Q  214 ctaaggagaccgttttaaaa-acattatggacttctacctacggttgcgactgttactaaaacttatcatt 283  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||| ||| ||| || |||||||||||||    
T  3074112 ctaaggagaccattttaaaatacattatggacctctacctacggtt-cgattgtcac-aaaacttatcatt 3074180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 9578129 - 9578183
Alignment:
Q  59 ctgggcacacgttcgggctcaacctatactttctttgtataactacaaaaaattt 113  Q
    |||||||||||| |||||||||||| || |||||||||||  |||||| ||||||    
T  9578129 ctgggcacacgtccgggctcaacctttattttctttgtatcgctacaagaaattt 9578183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 284
Target Start/End: Complemental strand, 29528655 - 29528617
Alignment:
Q  246 tctacctacggttgcgactgttactaaaacttatcattg 284  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  29528655 tctacctatggttgcggctgttactaaaacttatcattg 29528617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 9578172 - 9578240
Alignment:
Q  113 tacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaatct 181  Q
    ||||| |||||||||||| ||| |||| |||||  ||||| |||||   ||||||||||||||||||||    
T  9578172 tacaagaaatttgacttatagtgacagtcaaaatccgtcattatagagcaaatttccgtagctaaatct 9578240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 6e-26; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 61 - 185
Target Start/End: Complemental strand, 8882757 - 8882633
Alignment:
Q  61 gggcacacgttcgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactatagga 160  Q
    |||||||||  | ||||||||  ||||||||||||||| ||||||| |||||||||| |||||||||||  ||| || |||||||  |||||||||||||    
T  8882757 gggcacacgccctggctcaacacatactttctttgtatcactacaagaaatttacaagaaatttgacttttagtgacggccaaaatccgtcactatagga 8882658  T
Q  161 gaaatttccgtagctaaatctgtct 185  Q
     |||||||| |||||||||||||||    
T  8882657 aaaatttccttagctaaatctgtct 8882633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 72 - 187
Target Start/End: Original strand, 41504644 - 41504759
Alignment:
Q  72 cgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgt 171  Q
    |||||||||||  ||| ||||||||||  |||| | |||||||||| |||||||||||  ||| || |||||||  | ||||||||||  ||||||||||    
T  41504644 cgggctcaacccgtacattctttgtatcgctacgagaaatttacaagaaatttgacttttagtgacggccaaaatccatcactatagggcaaatttccgt 41504743  T
Q  172 agctaaatctgtctgt 187  Q
    ||||||||||||||||    
T  41504744 agctaaatctgtctgt 41504759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 41504824 - 41504894
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    ||||||||||| |||||||||||||| |||| |||||||||||||||  |||| |||||||||||||||||    
T  41504824 ctaaggagaccattttaaaaacattacggacatctacctacggttgcagctgtcactaaaacttatcattg 41504894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 9255643 - 9255709
Alignment:
Q  113 tacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaat 179  Q
    ||||| |||||||||||| ||| ||||||||||  ||||||||||||  ||||||||||||||||||    
T  9255643 tacaagaaatttgacttatagtgacagccaaaatccgtcactatagggcaaatttccgtagctaaat 9255709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 13153177 - 13153108
Alignment:
Q  214 ctaaggagaccgttttaaaa-acattatggacttctacctacggttgcgactgttactaaaacttatcatt 283  Q
    ||||||||||| |||||||| ||||||||||  |||||||||||||  |||||| ||||||||||||||||    
T  13153177 ctaaggagaccattttaaaatacattatggatctctacctacggttt-gactgtcactaaaacttatcatt 13153108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 179
Target Start/End: Original strand, 6623545 - 6623640
Alignment:
Q  84 atactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaat 179  Q
    |||||||||||||||  |||||| |||||||||| |||||||| ||   || || |||||||  ||||| ||||||| ||||||  ||||||||||    
T  6623545 atactttctttgtatcgctacaagaaatttacaacaaatttgaatttttgtgacggccaaaatccgtcaatataggaaaaatttatgtagctaaat 6623640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 24592463 - 24592392
Alignment:
Q  214 ctaaggagaccgttttaaaaaca-ttatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    ||||||| ||| ||||||||||| ||| |||| |||||||||| ||||| |||| ||||||| |||||||||    
T  24592463 ctaaggataccattttaaaaacatttaaggacctctacctacgattgcggctgtcactaaaatttatcattg 24592392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 10869689 - 10869743
Alignment:
Q  60 tgggcacacgttcgggctcaacctatactttctttgtataactacaaaaaattta 114  Q
    ||||||| || |||||||||||| ||||||||||||||| | ||||| |||||||    
T  10869689 tgggcacgcgctcgggctcaacccatactttctttgtatcattacaagaaattta 10869743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 22729449 - 22729506
Alignment:
Q  226 ttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcatt 283  Q
    |||||||||||||| |||| ||| |||||| |||||  ||| ||||||||||||||||    
T  22729449 ttttaaaaacattaaggacctctgcctacgattgcggttgtcactaaaacttatcatt 22729506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 284
Target Start/End: Original strand, 23448603 - 23448660
Alignment:
Q  227 tttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    |||||||||||||||||| | ||||||| ||| ||  ||| |||||||||||||||||    
T  23448603 tttaaaaacattatggacctttacctacagttacggttgtcactaaaacttatcattg 23448660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 468
Target Start/End: Original strand, 28282526 - 28282559
Alignment:
Q  435 ttagaataaattctcctcaactatgaactattat 468  Q
    ||||||| ||||||||||||||||||||||||||    
T  28282526 ttagaatcaattctcctcaactatgaactattat 28282559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 40146518 - 40146461
Alignment:
Q  227 tttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    |||||||| ||||||||| ||||| ||| |||| | |||| |||||||||||||||||    
T  40146518 tttaaaaatattatggacctctacttacagttgtggctgtcactaaaacttatcattg 40146461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 187
Target Start/End: Original strand, 10869757 - 10869805
Alignment:
Q  139 gccaaaaatcgtcactataggagaaatttccgtagctaaatctgtctgt 187  Q
    ||||||| |||| ||||||||  ||||||||||||||| ||||||||||    
T  10869757 gccaaaattcgttactatagggcaaatttccgtagctacatctgtctgt 10869805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 72 - 187
Target Start/End: Original strand, 19576269 - 19576384
Alignment:
Q  72 cgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgt 171  Q
    |||| |||||| |||||||||||||||  |||| |||||||||||| |||||||||||  ||| || |||||||  ||||||||||||  ||||||||||    
T  19576269 cgggatcaacccatactttctttgtatcgctacgaaaaatttacaagaaatttgacttttagtgacggccaaaatccgtcactatagggaaaatttccgt 19576368  T
Q  172 agctaaatctgtctgt 187  Q
    ||||||||||||||||    
T  19576369 agctaaatctgtctgt 19576384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 214 - 280
Target Start/End: Original strand, 19576449 - 19576515
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatc 280  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||| |||| |||||||||||||    
T  19576449 ctaaggagaccattttaaaaacattatggacctctacctacggttgcggctgtcactaaaacttatc 19576515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 27169604 - 27169534
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    ||||||||||| ||||||||||||||||| |||||||||||| ||||| |||| |||||||||||||||||    
T  27169604 ctaaggagaccattttaaaaacattatggtcttctacctacgattgcggctgtcactaaaacttatcattg 27169534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 280
Target Start/End: Complemental strand, 39021609 - 39021543
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatc 280  Q
    ||||||||||| |||||||||||| |||||  ||||||||||||||||||||| |||||||||||||    
T  39021609 ctaaggagaccattttaaaaacatcatggatctctacctacggttgcgactgtcactaaaacttatc 39021543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 3052580 - 3052708
Alignment:
Q  59 ctgggcacacgttcgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactatag 158  Q
    |||| ||||||  |||| |||||| || ||||||||| ||  |||||| ||||||  ||||||||||||||| ||| |||| |||||  ||||| |||||    
T  3052580 ctggacacacgcccgggttcaaccgatgctttctttgaatcgctacaagaaatttgtaaaaaatttgacttatagtgacagtcaaaatccgtcattatag 3052679  T
Q  159 gagaaatttccgtagctaaatctgtctgt 187  Q
    |  |||||| |||||||||||||||||||    
T  3052680 ggaaaattttcgtagctaaatctgtctgt 3052708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 4785175 - 4785245
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||   |||| |||||||||||||||||    
T  4785175 ctaaggagtccattttaaaaacattatggacctctacctacggttgtagctgtcactaaaacttatcattg 4785245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 77 - 187
Target Start/End: Complemental strand, 39021782 - 39021673
Alignment:
Q  77 tcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagcta 176  Q
    |||||| |||||||||||||||   | ||| |||||||||| ||||| |||||  |||||| |||||||  | ||||||||||  |||||||||||||||    
T  39021782 tcaacccatactttctttgtatttttgcaagaaatttacaagaaatt-gacttttagtaacggccaaaatccatcactatagggcaaatttccgtagcta 39021684  T
Q  177 aatctgtctgt 187  Q
    |||||||||||    
T  39021683 aatctgtctgt 39021673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 158
Target Start/End: Original strand, 4785017 - 4785100
Alignment:
Q  75 gctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactatag 158  Q
    |||||||| ||||||||||||||| ||| ||| ||||||||||||||||||| ||  ||| || |||||||  |||||||||||    
T  4785017 gctcaacccatactttctttgtatcactgcaagaaatttacaaaaaatttgatttttagtgacggccaaaatccgtcactatag 4785100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 179
Target Start/End: Original strand, 8911488 - 8911559
Alignment:
Q  108 aaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaat 179  Q
    |||||||||| |||||||||||  ||| || ||||||| |||||||||||||  ||||||||||||||||||    
T  8911488 aaatttacaagaaatttgacttttagtgacggccaaaattcgtcactatagggcaaatttccgtagctaaat 8911559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 226 - 284
Target Start/End: Original strand, 40813212 - 40813270
Alignment:
Q  226 ttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    |||||||||||||| |||| |||||||||||||||| ||||  ||||||||||||||||    
T  40813212 ttttaaaaacattaaggacctctacctacggttgcggctgtcgctaaaacttatcattg 40813270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 15731395 - 15731342
Alignment:
Q  226 ttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttat 279  Q
    ||||||||| ||||||||| |||||||||||||||| |||| ||||||||||||    
T  15731395 ttttaaaaatattatggacctctacctacggttgcggctgtcactaaaacttat 15731342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 15737046 - 15736989
Alignment:
Q  72 cgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgactt 129  Q
    |||| |||||||||| ||||||||||| ||||||| |||||||||| |||||||||||    
T  15737046 cgggttcaacctatattttctttgtatcactacaagaaatttacaagaaatttgactt 15736989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 22713817 - 22713748
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcatt 283  Q
    |||| |||||| ||||||||||||||||||  ||||| |||||||| |||||| ||||||||||| ||||    
T  22713817 ctaaagagaccattttaaaaacattatggatctctacatacggttgtgactgtcactaaaacttaacatt 22713748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 226 - 283
Target Start/End: Complemental strand, 23244949 - 23244892
Alignment:
Q  226 ttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcatt 283  Q
    |||||||||||||| |||| |||| ||||| |||||||||| ||||||||||||||||    
T  23244949 ttttaaaaacattaaggacctctatctacgattgcgactgtcactaaaacttatcatt 23244892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 145
Target Start/End: Complemental strand, 27169774 - 27169701
Alignment:
Q  72 cgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaa 145  Q
    ||||||||||| |||||||||||||||  ||||||  ||||||||| |||||||||||| ||| || |||||||    
T  27169774 cgggctcaacccatactttctttgtatcgctacaagcaatttacaagaaatttgacttatagtgacggccaaaa 27169701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 280
Target Start/End: Original strand, 8911632 - 8911698
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatc 280  Q
    |||| |||||| ||||||||| ||||||||| |||| ||||||||||| | || |||||||||||||    
T  8911632 ctaatgagaccattttaaaaatattatggacctctatctacggttgcggcggtcactaaaacttatc 8911698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 15731527 - 15731478
Alignment:
Q  131 cagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaatc 180  Q
    |||| |||||||||| |||||||| ||||| |||||||||||||||||||    
T  15731527 cagtgacagccaaaattcgtcactgtaggaaaaatttccgtagctaaatc 15731478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 180
Target Start/End: Complemental strand, 13760334 - 13760235
Alignment:
Q  81 cctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaatc 180  Q
    |||||||||| |||||||  |||||| |||||||||| |||||||| ||   || || |||||||  ||||| ||||||| ||||||  |||||||||||    
T  13760334 cctatactttatttgtatcgctacaacaaatttacaacaaatttgaatttttgtgacggccaaaatccgtcaatataggaaaaatttatgtagctaaatc 13760235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 187
Target Start/End: Complemental strand, 27925959 - 27925843
Alignment:
Q  71 tcgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccg 170  Q
    |||||||||||| ||| |||||||||||   ||||| ||||||| || |||||||||||  ||||||| ||||||| ||||||||||||  |||||||||    
T  27925959 tcgggctcaacccatattttctttgtatcgttacaagaaatttagaagaaatttgacttgtagtaacaaccaaaaaccgtcactatagggcaaatttccg 27925860  T
Q  171 tagctaaatctgtctgt 187  Q
    |||||||||| ||||||    
T  27925859 tagctaaatccgtctgt 27925843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 72 - 183
Target Start/End: Complemental strand, 31410653 - 31410542
Alignment:
Q  72 cgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgt 171  Q
    ||||||||||| || ||||||||||||   ||||| |||||||||| |||||||| ||  ||| || |||||||   |||||||||||  ||||||||||    
T  31410653 cgggctcaacccatgctttctttgtattgttacaagaaatttacaagaaatttgaattttagtgacggccaaaatctgtcactatagggcaaatttccgt 31410554  T
Q  172 agctaaatctgt 183  Q
    ||||||||||||    
T  31410553 agctaaatctgt 31410542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 31410473 - 31410403
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    ||||||||| | |||| |||||||||||||  |||||||||||||||| |||| |||||||||||||||||    
T  31410473 ctaaggagatcatttttaaaacattatggatctctacctacggttgcggctgtcactaaaacttatcattg 31410403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 63 - 187
Target Start/End: Original strand, 30546879 - 30547002
Alignment:
Q  63 gcacacgttcgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggaga 162  Q
    |||| |||| |||||||||| ||||||| ||||||| ||||||| ||||||| || |||||||||||  | | ||||||||||  |||||||| |||  |    
T  30546879 gcacgcgtttgggctcaaccaatactttatttgtatcactacaagaaatttataagaaatttgacttgtaatgacagccaaaatccgtcacta-agggca 30546977  T
Q  163 aatttccgtagctaaatctgtctgt 187  Q
    |||||  |||||||||| |||||||    
T  30546978 aatttatgtagctaaatttgtctgt 30547002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 30547068 - 30547136
Alignment:
Q  216 aaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    ||||||||  ||||||||| ||||||||| |||||||||||||| | |||| |||||||||||||||||    
T  30547068 aaggagactattttaaaaatattatggacctctacctacggttgtggctgtcactaaaacttatcattg 30547136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 84 - 183
Target Start/End: Complemental strand, 31162318 - 31162219
Alignment:
Q  84 atactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaatctgt 183  Q
    |||||||||||||||  |||||| |||||||||| |||||||| ||   || || |||||||  ||||| ||||||| ||||||  ||||||||||||||    
T  31162318 atactttctttgtatcgctacaagaaatttacaacaaatttgaatttttgtgacggccaaaatccgtcaatataggaaaaatttatgtagctaaatctgt 31162219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 27925779 - 27925709
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    ||||||||||| |||||  |||||||||||  |||||||| | ||||| |||| |||||||||||||||||    
T  27925779 ctaaggagaccattttatgaacattatggatctctacctatgattgcggctgtcactaaaacttatcattg 27925709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 31708900 - 31708831
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||| | |||| | | |||||||||||||    
T  31708900 ctaaggagaccattttaaaaacattatggatctctacctacggttgtggctgtcaat-aaacttatcattg 31708831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 34318561 - 34318492
Alignment:
Q  215 taaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    |||||||||| | ||||||||||||||||| ||||||||| |||| | | || |||| ||||||||||||    
T  34318561 taaggagaccatgttaaaaacattatggacctctacctacagttgtggcagtcactataacttatcattg 34318492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 475
Target Start/End: Original strand, 12539195 - 12539227
Alignment:
Q  443 aattctcctcaactatgaactattatactattc 475  Q
    ||||||||| |||||||||||||||||||||||    
T  12539195 aattctccttaactatgaactattatactattc 12539227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 6e-23; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 74 - 185
Target Start/End: Original strand, 38761567 - 38761678
Alignment:
Q  74 ggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtag 173  Q
    ||||||||| ||| ||||||| |||  |||||| |||||||||| |||||||||||  ||| || |||||||  ||||||||||||| ||||||||||||    
T  38761567 ggctcaacccataatttctttatatcgctacaagaaatttacaagaaatttgacttttagtgacggccaaaatccgtcactataggacaaatttccgtag 38761666  T
Q  174 ctaaatctgtct 185  Q
    ||||||||||||    
T  38761667 ctaaatctgtct 38761678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 43727201 - 43727314
Alignment:
Q  59 ctgggcacacgttcgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactatag 158  Q
    |||||||||||  |||| |||||| |||||||||||||||  ||| || |||||| ||| |||||||||||| ||||||||||||||  |||||||||||    
T  43727201 ctgggcacacgcccgggttcaaccaatactttctttgtatcgctataagaaatttgcaagaaatttgacttatagtaacagccaaaatccgtcactatag 43727300  T
Q  159 gagaaatttccgta 172  Q
    |  |||||||||||    
T  43727301 ggcaaatttccgta 43727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 9225709 - 9225837
Alignment:
Q  59 ctgggcacacgttcgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactatag 158  Q
    |||||||||||  ||||||||||| ||||||||||||||| ||||||| |||||| ||| |||||||||||  ||| ||||||||||  ||||||| | |    
T  9225709 ctgggcacacgcccgggctcaaccgatactttctttgtatcactacaagaaattttcaacaaatttgacttgtagtgacagccaaaatccgtcactttgg 9225808  T
Q  159 gagaaatttccgtagctaaatctgtctgt 187  Q
    |  |||||| ||||| ||||||| |||||    
T  9225809 ggcaaattttcgtagttaaatctatctgt 9225837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 26787221 - 26787093
Alignment:
Q  59 ctgggcacacgttcgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactatag 158  Q
    |||||||||||   |||||||||  ||| |||||||||||  |||||| |||||| ||| |||||||||||| ||  ||||||||||  |||||||||||    
T  26787221 ctgggcacacgcctgggctcaactgatattttctttgtatcgctacaagaaatttgcaagaaatttgacttatagagacagccaaaatccgtcactatag 26787122  T
Q  159 gagaaatttccgtagctaaatctgtctgt 187  Q
    |  |||||||| ||||||||| |||||||    
T  26787121 ggcaaatttccatagctaaatttgtctgt 26787093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 74 - 180
Target Start/End: Original strand, 6113186 - 6113292
Alignment:
Q  74 ggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtag 173  Q
    ||||||||| |||||||||||||||  ||||   |||||| ||| |||||||||||  ||| | ||||||||  ||||||||||||  ||||||||||||    
T  6113186 ggctcaaccgatactttctttgtatcgctacccgaaatttgcaagaaatttgacttgtagtgatagccaaaatccgtcactatagggtaaatttccgtag 6113285  T
Q  174 ctaaatc 180  Q
    |||||||    
T  6113286 ctaaatc 6113292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 24276798 - 24276728
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    ||||||||||| |||||||||||||||| || ||| |||||||||||| |||| | |||||||||||||||    
T  24276798 ctaaggagaccattttaaaaacattatgaacatcttcctacggttgcggctgtcagtaaaacttatcattg 24276728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 24276990 - 24276870
Alignment:
Q  60 tgggcacacgttcgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactatagg 159  Q
    |||||||| | ||||| | |||| | ||||||||||||| ||||||| |||||||||||||| |||| ||  ||| | ||||||||  | ||||||||||    
T  24276990 tgggcacatgctcgggttaaacccaaactttctttgtatcactacaagaaatttacaaaaaaattgaattttagtgatagccaaaatccttcactatagg 24276891  T
Q  160 agaaatttccgtagctaaatc 180  Q
      ||||||||||||| |||||    
T  24276890 gaaaatttccgtagcgaaatc 24276870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 72 - 187
Target Start/End: Complemental strand, 29953197 - 29953082
Alignment:
Q  72 cgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgt 171  Q
    ||||||||||| |||||||||||||||  ||| || |||||||||  |||||||||||   || ||  ||||||  | ||||||||||| |||||||| |    
T  29953197 cgggctcaacccatactttctttgtattgctataagaaatttacacgaaatttgactttttgtgacgaccaaaatccatcactataggacaaatttccat 29953098  T
Q  172 agctaaatctgtctgt 187  Q
    || |||||||| ||||    
T  29953097 agttaaatctggctgt 29953082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 43217096 - 43216993
Alignment:
Q  84 atactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaatctgt 183  Q
    |||||||||||||||  |||||| |||||||||| |||||||| ||   || ||||| ||||  ||||| ||||||| ||||||  ||||||||||| ||    
T  43217096 atactttctttgtatcgctacaagaaatttacaacaaatttgaatttttgtgacagctaaaatccgtcaatataggaaaaatttatgtagctaaatccgt 43216997  T
Q  184 ctgt 187  Q
    ||||    
T  43216996 ctgt 43216993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 276
Target Start/End: Complemental strand, 29953017 - 29952956
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaact 276  Q
    ||||||||||||||||||| ||||| || || |||||||||||||||  ||||||||||||||    
T  29953017 ctaaggagaccgttttaaatacattttg-acatctacctacggttgcatctgttactaaaact 29952956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 31035982 - 31035913
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    ||||||||||| |||||||||||| || ||| |||||| ||||||||| |||| ||||||| |||||||||    
T  31035982 ctaaggagaccattttaaaaacatcat-gacctctaccgacggttgcggctgtcactaaaatttatcattg 31035913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 28042112 - 28042055
Alignment:
Q  72 cgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgactt 129  Q
    ||||||||||| ||||||| ||||||| | ||||| ||||| ||||||||||||||||    
T  28042112 cgggctcaacccatactttatttgtatcaatacaagaaattaacaaaaaatttgactt 28042055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 6113374 - 6113425
Alignment:
Q  226 ttttaaaaacattatggacttctacctacggttgcgactgttactaaaactt 277  Q
    ||||||||| ||||||||| ||||||||||||| ||||| | ||||||||||    
T  6113374 ttttaaaaatattatggacctctacctacggttacgactatcactaaaactt 6113425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 25252921 - 25252974
Alignment:
Q  60 tgggcacacgttcgggctcaacctatactttctttgtataactacaaaaaattt 113  Q
    |||||||||| || ||||||||| |||||||||||||||  |||||| ||||||    
T  25252921 tgggcacacgctcaggctcaaccgatactttctttgtattgctacaagaaattt 25252974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 30620707 - 30620833
Alignment:
Q  62 ggcacacgttcgggctcaacctatactttctttgtataactacaaaaaatttac-aaaaaatttgacttacagtaacagccaaaaatcgtcactatagga 160  Q
    ||||||||  ||||||||||| |||||||||||||||| |||||| |||||| | |||||| ||||| || ||| ||| ||||||  ||||||||||||     
T  30620707 ggcacacgcccgggctcaaccgatactttctttgtatagctacaagaaatttgcaaaaaaaattgacctatagtgacaaccaaaatccgtcactataggg 30620806  T
Q  161 gaaatttccgtagctaaatctgtctgt 187  Q
     ||||||| ||||||||||||||||||    
T  30620807 caaatttctgtagctaaatctgtctgt 30620833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 12648849 - 12648916
Alignment:
Q  215 taaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcat 282  Q
    |||||||||| |||||||||||||||||||  ||||||||||||| | |||| |||||||||||||||    
T  12648849 taaggagaccattttaaaaacattatggaccactacctacggttgtggctgtcactaaaacttatcat 12648916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 7990398 - 7990327
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggtt-gcgactgttactaaaacttatcattg 284  Q
    ||||||||||| ||||||||||||||| ||| |||||||| |||| ||| |||| |||||||||||||||||    
T  7990398 ctaaggagaccattttaaaaacattatagacctctacctatggttggcggctgtcactaaaacttatcattg 7990327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 226 - 284
Target Start/End: Original strand, 30620911 - 30620969
Alignment:
Q  226 ttttaaaa-acattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    |||||||| ||||||||||| ||||||||||||| ||||||| |||||||||||||||||    
T  30620911 ttttaaaatacattatggacctctacctacggtt-cgactgtcactaaaacttatcattg 30620969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 187
Target Start/End: Original strand, 2226358 - 2226432
Alignment:
Q  113 tacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaatctgtctgt 187  Q
    ||||| |||||||||||  ||| || |||||||  |||||||||||   ||||||||||||||||||||||||||    
T  2226358 tacaagaaatttgacttttagtgacggccaaaatccgtcactatagtgcaaatttccgtagctaaatctgtctgt 2226432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 219 - 280
Target Start/End: Original strand, 23302876 - 23302936
Alignment:
Q  219 gagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatc 280  Q
    |||||||||||||| |||||||| || |||||||||||||||  |||| |||||||||||||    
T  23302876 gagaccgttttaaatacattatg-acctctacctacggttgcagctgtcactaaaacttatc 23302936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 7990532 - 7990464
Alignment:
Q  119 aaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaatctgtctgt 187  Q
    |||||||||||  ||| || |||||||  |||||||| |||| |||||||||||||||||||| |||||    
T  7990532 aaatttgacttttagtgacggccaaaatccgtcactacaggacaaatttccgtagctaaatctatctgt 7990464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 12181325 - 12181261
Alignment:
Q  220 agaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    ||||| |||||||||||||| |||| | ||||| |||||||| |||| |||||| ||||||||||    
T  12181325 agaccattttaaaaacattacggacctatacctgcggttgcggctgtcactaaatcttatcattg 12181261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 187
Target Start/End: Original strand, 12648717 - 12648784
Alignment:
Q  120 aatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaatctgtctgt 187  Q
    ||||||||||  ||| ||||||||||  ||| || |||||| |||||||||||||||||| |||||||    
T  12648717 aatttgacttgtagtgacagccaaaatccgttaccataggacaaatttccgtagctaaatatgtctgt 12648784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 280
Target Start/End: Original strand, 2226497 - 2226563
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatc 280  Q
    ||||||||||  ||||||||| |||||| || ||||||||||||| |  |||| |||||||||||||    
T  2226497 ctaaggagacgattttaaaaatattatgaacctctacctacggttacagctgtcactaaaacttatc 2226563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 9740959 - 9741029
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||    
T  9740959 ctaaggagaccattttaaaaacattatggacctctacctacggttacgactgtcactaaaacttatcattg 9741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 61 - 183
Target Start/End: Original strand, 46986534 - 46986656
Alignment:
Q  61 gggcacacgttcgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactatagga 160  Q
    |||||| ||| ||||||||||| ||||||||||| |||   ||| | |||||||||| |||||||||||  ||| || |||||||  ||||||||||||     
T  46986534 gggcacgcgtccgggctcaacccatactttctttttatcgttacgagaaatttacaagaaatttgacttttagtgacggccaaaatccgtcactataggg 46986633  T
Q  161 gaaatttccgtagctaaatctgt 183  Q
     ||||||||||||||||||||||    
T  46986634 aaaatttccgtagctaaatctgt 46986656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 280
Target Start/End: Original strand, 16415967 - 16416033
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatc 280  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||  |||| |||||||||||||    
T  16415967 ctaaggagaccattttaaaaacattatggacttctacctatggttgcagctgtcactaaaacttatc 16416033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 280
Target Start/End: Original strand, 18516941 - 18517007
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatc 280  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||  |||| |||||||||||||    
T  18516941 ctaaggagaccattttaaaaacattatggacttctacctatggttgcagctgtcactaaaacttatc 18517007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 280
Target Start/End: Original strand, 33776700 - 33776765
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatc 280  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||| |||| |||||||||||||    
T  33776700 ctaaggagaccgttttaaaaacattat-gacctctacctacggttgcggctgtcactaaaacttatc 33776765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 280
Target Start/End: Original strand, 46986726 - 46986792
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatc 280  Q
    ||||||||||| ||||||||||||| ||||| |||||||||||||||| |||| |||||||||||||    
T  46986726 ctaaggagaccattttaaaaacattttggacctctacctacggttgcggctgtcactaaaacttatc 46986792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 55194398 - 55194466
Alignment:
Q  215 taaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||  ||||||||||| |||||    
T  55194398 taaggagaccattttaaaaatattatggacttctacctacggttgcgactg-cactaaaacttaacattg 55194466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 72 - 187
Target Start/End: Original strand, 47041146 - 47041261
Alignment:
Q  72 cgggctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgt 171  Q
    |||||||||||  ||||||||||||||  |||||| |||||||||| ||||| |||||  ||| || |||||||  ||||||||||||  ||| ||| ||    
T  47041146 cgggctcaacccctactttctttgtatcgctacaagaaatttacaacaaattagacttttagtgacggccaaaatccgtcactatagggcaaacttcagt 47041245  T
Q  172 agctaaatctgtctgt 187  Q
     |||||||||||||||    
T  47041246 cgctaaatctgtctgt 47041261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 187
Target Start/End: Original strand, 30381831 - 30381905
Alignment:
Q  113 tacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaatctgtctgt 187  Q
    ||||| |||||||||||  ||| |||||||||| |||||||||||||  |||||||||||| |||||||||||||    
T  30381831 tacaagaaatttgacttttagtgacagccaaaattcgtcactatagggtaaatttccgtagttaaatctgtctgt 30381905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 46279379 - 46279309
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    ||||||||||| ||||||||| ||||||||| | |||||||||||| |||||| |||||| ||||||||||    
T  46279379 ctaaggagaccattttaaaaatattatggacctatacctacggttgtgactgtcactaaaccttatcattg 46279309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 53682139 - 53682209
Alignment:
Q  113 tacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaatctgt 183  Q
    ||||| |||||||||||  ||| ||||||||||  ||||||||||||  ||||||||||||||||||||||    
T  53682139 tacaagaaatttgacttttagtgacagccaaaatccgtcactatagggcaaatttccgtagctaaatctgt 53682209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 20844612 - 20844676
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaactta 278  Q
    ||||||||||| |||||||||  |||||||| ||| |||||||||||| |||| |||||||||||    
T  20844612 ctaaggagaccattttaaaaaatttatggacctcttcctacggttgcggctgtcactaaaactta 20844676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 15667380 - 15667427
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcg 261  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  15667380 ctaaggagaccattttaaaaacattattgacctctacctacggttgcg 15667427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 280
Target Start/End: Original strand, 47041326 - 47041393
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctac-ggttgcgactgttactaaaacttatc 280  Q
    ||||||||||| ||||||||| ||||||||| ||||||||| ||||||| |||| | |||||||||||    
T  47041326 ctaaggagaccattttaaaaatattatggacctctacctacgggttgcggctgtcattaaaacttatc 47041393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 284
Target Start/End: Complemental strand, 3858880 - 3858823
Alignment:
Q  226 ttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    ||||||||||| ||||||||||||||||||| |||| |||| ||||||| |||||||||    
T  3858880 ttttaaaaacaatatggacttctacctacgg-tgcggctgtcactaaaatttatcattg 3858823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 16312020 - 16312074
Alignment:
Q  75 gctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgactt 129  Q
    |||||||| |||||||||||||||  |||||| |||||||||| |||||||||||    
T  16312020 gctcaacccatactttctttgtatcgctacaagaaatttacaagaaatttgactt 16312074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 18488804 - 18488858
Alignment:
Q  75 gctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgactt 129  Q
    |||||||| |||||||||||||||  |||||| |||||||||| |||||||||||    
T  18488804 gctcaacccatactttctttgtatcgctacaagaaatttacaagaaatttgactt 18488858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 18493014 - 18493068
Alignment:
Q  75 gctcaacctatactttctttgtataactacaaaaaatttacaaaaaatttgactt 129  Q
    |||||||| |||||||||||||||  |||||| |||||||||| |||||||||||    
T  18493014 gctcaacccatactttctttgtatcgctacaagaaatttacaagaaatttgactt 18493068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 24130538 - 24130468
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    |||| |||||||||||||||||| ||||||| | ||||||| ||| ||  ||| |||||||||||||||||    
T  24130538 ctaaagagaccgttttaaaaacagtatggacatttacctacagttacggttgtcactaaaacttatcattg 24130468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 187
Target Start/End: Original strand, 33776561 - 33776635
Alignment:
Q  113 tacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaatctgtctgt 187  Q
    ||||| |||||||||||  ||| || |||||||  ||||||| ||||  ||||||||||||||||||||||||||    
T  33776561 tacaagaaatttgacttttagtgacggccaaaatccgtcactgtagggaaaatttccgtagctaaatctgtctgt 33776635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 47472747 - 47472821
Alignment:
Q  214 ctaaggagaccgttttaaaaacattat----ggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    ||||||| ||| |||||||||||||||    |||| |||||||||||||||| |||| |||||||| ||||||||    
T  47472747 ctaaggataccattttaaaaacattatctaaggacctctacctacggttgcggctgtcactaaaacctatcattg 47472821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 279
Target Start/End: Original strand, 53682278 - 53682342
Alignment:
Q  214 ctaaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttat 279  Q
    ||||| ||||| |||||||||||||||| || ||||||||| |||||| |||| ||||||||||||    
T  53682278 ctaagaagaccattttaaaaacattatg-acctctacctacagttgcggctgtcactaaaacttat 53682342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 46279518 - 46279446
Alignment:
Q  113 tacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaatctgtct 185  Q
    ||||| |||||||||||  ||| || ||||||| |||||||||||||  ||||||| ||||||||||| ||||    
T  46279518 tacaagaaatttgacttttagttacggccaaaattcgtcactatagggcaaatttctgtagctaaatccgtct 46279446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 187
Target Start/End: Original strand, 16415828 - 16415902
Alignment:
Q  113 tacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaatctgtctgt 187  Q
    ||||| |||||||||||  ||| || |||||||  ||||||||||||  |||||| ||||| |||||||||||||    
T  16415828 tacaagaaatttgacttttagtgacggccaaaatccgtcactatagggaaaattttcgtaggtaaatctgtctgt 16415902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 187
Target Start/End: Original strand, 18516802 - 18516876
Alignment:
Q  113 tacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaatctgtctgt 187  Q
    ||||| |||||||||||  ||| || |||||||  ||||||||||||  |||||| ||||| |||||||||||||    
T  18516802 tacaagaaatttgacttttagtgacggccaaaatccgtcactatagggaaaattttcgtaggtaaatctgtctgt 18516876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 280
Target Start/End: Original strand, 30381972 - 30382036
Alignment:
Q  215 taaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatc 280  Q
    |||||||||| |||||||||||| ||  || | |||||||||||||| |||| |||||||||||||    
T  30381972 taaggagaccattttaaaaacatcata-acctatacctacggttgcggctgtcactaaaacttatc 30382036  T

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Target: scaffold0178 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 17112 - 17181
Alignment:
Q  215 taaggagaccgttttaaaaacattatggacttctacctacggttgcgactgttactaaaacttatcattg 284  Q
    |||||| ||| ||||||| |||||||||||||||||||||||||||  || | |||||||||||||||||    
T  17112 taaggataccattttaaatacattatggacttctacctacggttgccgctatcactaaaacttatcattg 17181  T

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Target: scaffold0178; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 16980 - 17039
Alignment:
Q  120 aatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaat 179  Q
    ||||||||||||||| ||| ||||||  |||||||| |||| ||||||||||| ||||||    
T  16980 aatttgacttacagtgacaaccaaaatccgtcactaaaggacaaatttccgtaactaaat 17039  T

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Target: scaffold0470 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 179
Target Start/End: Original strand, 12969 - 13064
Alignment:
Q  84 atactttctttgtataactacaaaaaatttacaaaaaatttgacttacagtaacagccaaaaatcgtcactataggagaaatttccgtagctaaat 179  Q
    |||||||||||||||  |||||| |||||||||| |||||||| ||   || || |||||||  ||||| ||||||| ||||||  ||||||||||    
T  12969 atactttctttgtatcgctacaagaaatttacaacaaatttgaatttttgtgacggccaaaatacgtcaatataggaaaaatttatgtagctaaat 13064  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 281
Target Start/End: Complemental strand, 435738 - 435688
Alignment:
Q  231 aaaacattatggacttctacctacggttgcgactgttactaaaacttatca 281  Q
    ||||||||| |||| ||||||||||||||||  ||| ||||||||||||||    
T  435738 aaaacattaaggacctctacctacggttgcggttgtcactaaaacttatca 435688  T

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Target: scaffold0726 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0726
Description:

Target: scaffold0726; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 365
Target Start/End: Original strand, 630 - 675
Alignment:
Q  320 aaattctgaaaatgaagaagtcataaaattacaactaaaattagtt 365  Q
    ||||||| |||||||| || |||||||||||| |||||||||||||    
T  630 aaattctaaaaatgaataattcataaaattaccactaaaattagtt 675  T

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