View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14259_high_13 (Length: 380)
Name: NF14259_high_13
Description: NF14259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14259_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 10 - 363
Target Start/End: Original strand, 43690256 - 43690610
Alignment:
| Q |
10 |
attattctttctgcttgtaagttgtaaccaaagtataatatttatcttgttatttggtattggcaatgttagttgatgcaagataaggtgattcaggttt |
109 |
Q |
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| T |
43690256 |
attattctttctgcttgtaagttgtaaccaaagtataatatttatcttgttatttggtattggcaatgttagttgatgcaagataaggtgattcaggttt |
43690355 |
T |
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| Q |
110 |
tatgnnnnnnnnn-gccatggaggtctgccactgtgtcctgatggaaggatgtgttccctgagaagggcaaagacaataggcaaaataatattatgaatc |
208 |
Q |
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| T |
43690356 |
tatatgttttttttgccatggaggtctgccactgtgtcctgatggaaggatgtgttccctgagaagggcaaagacaataggcaaaataatattatgaatc |
43690455 |
T |
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| Q |
209 |
tttaaaactttaaattttaaaatgcattgcaatctacaacataggtaggcgatttcaattttaaagactataaaatatactgtacaacataatgaaaact |
308 |
Q |
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| T |
43690456 |
tttaaaactttaaattttaaaatgcattgcaatctacaacataggtaggcgatttcaattttaaagactataaaatatactgtacaacataatgaaaact |
43690555 |
T |
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| Q |
309 |
catgttcattggcatagcttacatttattgatatggattttcactaacatcacat |
363 |
Q |
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| T |
43690556 |
catgttcattggcatagcttacatttattgatatggattttcactaacatcacat |
43690610 |
T |
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